HEADER TRANSFERASE 08-OCT-20 7KD7 TITLE CRYSTAL STRUCTURE OF HUMAN NATD (NAA40) BOUND TO A BISUBSTRATE TITLE 2 ANALOGUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ALPHA-ACETYLTRANSFERASE 40; COMPND 3 CHAIN: D, A; COMPND 4 SYNONYM: N-ACETYLTRANSFERASE 11,N-ALPHA-ACETYLTRANSFERASE D,HNATD, COMPND 5 PROTEIN ACETYLTRANSFERASE 1; COMPND 6 EC: 2.3.1.257; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: SER-GLY-ARG-GLY-LYS; COMPND 10 CHAIN: E, B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NAA40, NAT11, PATT1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS NATD, NAA40, TRANSFERASE, BI-SUBSTRATE EXPDTA X-RAY DIFFRACTION AUTHOR S.DENG,R.MARMORSTEIN REVDAT 4 18-OCT-23 7KD7 1 REMARK REVDAT 3 14-JUL-21 7KD7 1 JRNL REVDAT 2 30-JUN-21 7KD7 1 JRNL REVDAT 1 16-JUN-21 7KD7 0 JRNL AUTH Y.DENG,S.DENG,Y.H.HO,S.M.GARDNER,Z.HUANG,R.MARMORSTEIN, JRNL AUTH 2 R.HUANG JRNL TITL NOVEL BISUBSTRATE INHIBITORS FOR PROTEIN N-TERMINAL JRNL TITL 2 ACETYLTRANSFERASE D. JRNL REF J.MED.CHEM. V. 64 8263 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 34110812 JRNL DOI 10.1021/ACS.JMEDCHEM.1C00141 REMARK 2 REMARK 2 RESOLUTION. 1.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 79844 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 4010 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 63.4100 - 4.4200 1.00 2889 123 0.1797 0.2194 REMARK 3 2 4.4200 - 3.5100 0.99 2712 132 0.1374 0.1704 REMARK 3 3 3.5100 - 3.0600 1.00 2706 136 0.1569 0.1623 REMARK 3 4 3.0600 - 2.7800 1.00 2674 145 0.1614 0.1719 REMARK 3 5 2.7800 - 2.5900 1.00 2604 173 0.1545 0.1565 REMARK 3 6 2.5900 - 2.4300 1.00 2661 148 0.1481 0.1568 REMARK 3 7 2.4300 - 2.3100 1.00 2633 156 0.1501 0.1726 REMARK 3 8 2.3100 - 2.2100 1.00 2645 133 0.1470 0.1629 REMARK 3 9 2.2100 - 2.1300 1.00 2627 139 0.1567 0.1899 REMARK 3 10 2.1300 - 2.0500 1.00 2627 138 0.1544 0.1763 REMARK 3 11 2.0500 - 1.9900 1.00 2601 160 0.1565 0.1829 REMARK 3 12 1.9900 - 1.9300 1.00 2589 154 0.1565 0.1667 REMARK 3 13 1.9300 - 1.8800 1.00 2611 156 0.1610 0.1720 REMARK 3 14 1.8800 - 1.8300 1.00 2638 127 0.1741 0.2187 REMARK 3 15 1.8300 - 1.7900 1.00 2581 140 0.1639 0.2114 REMARK 3 16 1.7900 - 1.7500 1.00 2629 147 0.1749 0.2040 REMARK 3 17 1.7500 - 1.7200 1.00 2585 128 0.1743 0.2001 REMARK 3 18 1.7200 - 1.6900 1.00 2625 140 0.1754 0.1930 REMARK 3 19 1.6900 - 1.6600 1.00 2587 116 0.1749 0.2309 REMARK 3 20 1.6600 - 1.6300 0.99 2628 133 0.1714 0.2171 REMARK 3 21 1.6300 - 1.6000 0.98 2538 149 0.1751 0.1996 REMARK 3 22 1.6000 - 1.5800 0.99 2623 120 0.1735 0.1956 REMARK 3 23 1.5800 - 1.5500 0.99 2585 110 0.1863 0.1678 REMARK 3 24 1.5500 - 1.5300 0.98 2567 129 0.1943 0.2197 REMARK 3 25 1.5300 - 1.5100 0.99 2515 154 0.1969 0.2474 REMARK 3 26 1.5100 - 1.4900 0.98 2569 139 0.2008 0.2143 REMARK 3 27 1.4900 - 1.4700 0.98 2548 136 0.2079 0.2852 REMARK 3 28 1.4700 - 1.4600 0.98 2531 126 0.2226 0.2363 REMARK 3 29 1.4600 - 1.4400 0.95 2506 123 0.2429 0.2709 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.131 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.805 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.98 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 3517 REMARK 3 ANGLE : 1.587 4742 REMARK 3 CHIRALITY : 0.105 488 REMARK 3 PLANARITY : 0.010 593 REMARK 3 DIHEDRAL : 18.178 1261 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7KD7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1000252298. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79927 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.440 REMARK 200 RESOLUTION RANGE LOW (A) : 126.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.04100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.46 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.71300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4U9W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BIS-TRIS PH 5.5, 2000 MM REMARK 280 AMMONIUM SULFATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.21650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.41050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.17450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.41050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.21650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.17450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS D 219 REMARK 465 PHE D 220 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU D 17 CG CD OE1 OE2 REMARK 470 GLU D 18 CG CD OE1 OE2 REMARK 470 ARG D 19 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 47 CG CD CE NZ REMARK 470 ASP D 49 CG OD1 OD2 REMARK 470 ARG D 95 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 96 CG CD OE1 OE2 REMARK 470 LYS D 145 CG CD CE NZ REMARK 470 GLU D 207 CG CD OE1 OE2 REMARK 470 LYS E 5 CD CE NZ REMARK 470 GLU A 17 CG CD OE1 OE2 REMARK 470 GLU A 18 CG CD OE1 OE2 REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 GLU A 96 CG CD OE1 OE2 REMARK 470 ARG A 217 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 219 CG CD CE NZ REMARK 470 LYS B 5 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 98 O HOH A 1405 1.38 REMARK 500 HZ1 LYS D 153 O HOH D 607 1.53 REMARK 500 HZ1 LYS A 93 O HOH A 1407 1.56 REMARK 500 HZ1 LYS D 153 O HOH D 603 1.58 REMARK 500 O HOH A 1436 O HOH A 1491 1.70 REMARK 500 O HOH D 704 O HOH D 726 1.85 REMARK 500 O HOH D 720 O HOH D 743 1.86 REMARK 500 O HOH D 724 O HOH D 732 1.97 REMARK 500 O HOH D 682 O HOH D 717 1.99 REMARK 500 O1 GOL D 501 O HOH D 601 1.99 REMARK 500 O ALA A 20 O HOH A 1401 2.03 REMARK 500 O GLU D 207 O HOH D 602 2.04 REMARK 500 O HOH D 717 O HOH D 728 2.07 REMARK 500 NZ LYS D 153 O HOH D 603 2.10 REMARK 500 OD2 ASP D 23 O HOH D 604 2.11 REMARK 500 O HOH D 656 O HOH D 670 2.12 REMARK 500 OE1 GLU D 58 O HOH D 605 2.15 REMARK 500 NZ LYS D 177 O CYS D 209 2.15 REMARK 500 NH1 ARG A 34 O HOH A 1402 2.17 REMARK 500 O LYS E 5 N NH2 E 302 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG D 34 NE - CZ - NH2 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 34 NE - CZ - NH1 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG A 34 NE - CZ - NH2 ANGL. DEV. = 5.1 DEGREES REMARK 500 MET A 84 CG - SD - CE ANGL. DEV. = 13.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER D 116 -32.52 -138.68 REMARK 500 ASN D 179 76.79 -100.23 REMARK 500 GLU A 18 -72.50 -60.71 REMARK 500 GLN A 87 36.32 -92.68 REMARK 500 SER A 116 -30.55 -147.22 REMARK 500 GLN A 167 33.61 70.45 REMARK 500 REMARK 500 REMARK: NULL DBREF 7KD7 D 17 220 UNP Q86UY6 NAA40_HUMAN 17 220 DBREF 7KD7 E 1 5 PDB 7KD7 7KD7 1 5 DBREF 7KD7 A 17 220 UNP Q86UY6 NAA40_HUMAN 17 220 DBREF 7KD7 B 1 5 PDB 7KD7 7KD7 1 5 SEQRES 1 D 204 GLU GLU ARG ALA ALA MET ASP ALA VAL CYS ALA LYS VAL SEQRES 2 D 204 ASP ALA ALA ASN ARG LEU GLY ASP PRO LEU GLU ALA PHE SEQRES 3 D 204 PRO VAL PHE LYS LYS TYR ASP ARG ASN GLY LEU ASN VAL SEQRES 4 D 204 SER ILE GLU CYS LYS ARG VAL SER GLY LEU GLU PRO ALA SEQRES 5 D 204 THR VAL ASP TRP ALA PHE ASP LEU THR LYS THR ASN MET SEQRES 6 D 204 GLN THR MET TYR GLU GLN SER GLU TRP GLY TRP LYS ASP SEQRES 7 D 204 ARG GLU LYS ARG GLU GLU MET THR ASP ASP ARG ALA TRP SEQRES 8 D 204 TYR LEU ILE ALA TRP GLU ASN SER SER VAL PRO VAL ALA SEQRES 9 D 204 PHE SER HIS PHE ARG PHE ASP VAL GLU CYS GLY ASP GLU SEQRES 10 D 204 VAL LEU TYR CYS TYR GLU VAL GLN LEU GLU SER LYS VAL SEQRES 11 D 204 ARG ARG LYS GLY LEU GLY LYS PHE LEU ILE GLN ILE LEU SEQRES 12 D 204 GLN LEU MET ALA ASN SER THR GLN MET LYS LYS VAL MET SEQRES 13 D 204 LEU THR VAL PHE LYS HIS ASN HIS GLY ALA TYR GLN PHE SEQRES 14 D 204 PHE ARG GLU ALA LEU GLN PHE GLU ILE ASP ASP SER SER SEQRES 15 D 204 PRO SER MET SER GLY CYS CYS GLY GLU ASP CYS SER TYR SEQRES 16 D 204 GLU ILE LEU SER ARG ARG THR LYS PHE SEQRES 1 E 5 SER GLY ARG GLY LYS SEQRES 1 A 204 GLU GLU ARG ALA ALA MET ASP ALA VAL CYS ALA LYS VAL SEQRES 2 A 204 ASP ALA ALA ASN ARG LEU GLY ASP PRO LEU GLU ALA PHE SEQRES 3 A 204 PRO VAL PHE LYS LYS TYR ASP ARG ASN GLY LEU ASN VAL SEQRES 4 A 204 SER ILE GLU CYS LYS ARG VAL SER GLY LEU GLU PRO ALA SEQRES 5 A 204 THR VAL ASP TRP ALA PHE ASP LEU THR LYS THR ASN MET SEQRES 6 A 204 GLN THR MET TYR GLU GLN SER GLU TRP GLY TRP LYS ASP SEQRES 7 A 204 ARG GLU LYS ARG GLU GLU MET THR ASP ASP ARG ALA TRP SEQRES 8 A 204 TYR LEU ILE ALA TRP GLU ASN SER SER VAL PRO VAL ALA SEQRES 9 A 204 PHE SER HIS PHE ARG PHE ASP VAL GLU CYS GLY ASP GLU SEQRES 10 A 204 VAL LEU TYR CYS TYR GLU VAL GLN LEU GLU SER LYS VAL SEQRES 11 A 204 ARG ARG LYS GLY LEU GLY LYS PHE LEU ILE GLN ILE LEU SEQRES 12 A 204 GLN LEU MET ALA ASN SER THR GLN MET LYS LYS VAL MET SEQRES 13 A 204 LEU THR VAL PHE LYS HIS ASN HIS GLY ALA TYR GLN PHE SEQRES 14 A 204 PHE ARG GLU ALA LEU GLN PHE GLU ILE ASP ASP SER SER SEQRES 15 A 204 PRO SER MET SER GLY CYS CYS GLY GLU ASP CYS SER TYR SEQRES 16 A 204 GLU ILE LEU SER ARG ARG THR LYS PHE SEQRES 1 B 5 SER GLY ARG GLY LYS HET GOL D 501 12 HET GOL D 502 12 HET SO4 D 503 5 HET SO4 D 504 5 HET SO4 D 505 5 HET BTB D 506 33 HET CMC E 301 84 HET NH2 E 302 3 HET GOL A1301 13 HET SO4 A1302 5 HET GOL A1303 12 HET CMC B 301 84 HET NH2 B 302 3 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETNAM CMC CARBOXYMETHYL COENZYME *A HETNAM NH2 AMINO GROUP HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN BTB BIS-TRIS BUFFER FORMUL 5 GOL 4(C3 H8 O3) FORMUL 7 SO4 4(O4 S 2-) FORMUL 10 BTB C8 H19 N O5 FORMUL 11 CMC 2(C23 H38 N7 O18 P3 S) FORMUL 12 NH2 2(H2 N) FORMUL 18 HOH *369(H2 O) HELIX 1 AA1 GLU D 18 ARG D 34 1 17 HELIX 2 AA2 PHE D 42 PHE D 45 5 4 HELIX 3 AA3 SER D 63 LEU D 65 5 3 HELIX 4 AA4 GLU D 66 SER D 88 1 23 HELIX 5 AA5 LYS D 93 ASP D 103 1 11 HELIX 6 AA6 SER D 144 ARG D 147 5 4 HELIX 7 AA7 GLY D 150 THR D 166 1 17 HELIX 8 AA8 ASN D 179 GLU D 188 1 10 HELIX 9 AA9 SER D 198 SER D 202 5 5 HELIX 10 AB1 GLU A 18 ARG A 34 1 17 HELIX 11 AB2 ASP A 37 PHE A 45 5 9 HELIX 12 AB3 SER A 63 LEU A 65 5 3 HELIX 13 AB4 GLU A 66 GLN A 87 1 22 HELIX 14 AB5 LYS A 93 ASP A 103 1 11 HELIX 15 AB6 SER A 144 ARG A 147 5 4 HELIX 16 AB7 GLY A 150 GLN A 167 1 18 HELIX 17 AB8 ASN A 179 GLU A 188 1 10 HELIX 18 AB9 SER A 198 SER A 202 5 5 SHEET 1 AA1 8 LYS D 47 TYR D 48 0 SHEET 2 AA1 8 VAL D 55 ARG D 61 -1 O VAL D 55 N TYR D 48 SHEET 3 AA1 8 TRP D 107 GLU D 113 -1 O TRP D 112 N SER D 56 SHEET 4 AA1 8 PRO D 118 GLU D 129 -1 O ALA D 120 N ALA D 111 SHEET 5 AA1 8 ASP D 132 LEU D 142 -1 O VAL D 134 N ASP D 127 SHEET 6 AA1 8 LYS D 170 PHE D 176 1 O MET D 172 N CYS D 137 SHEET 7 AA1 8 TYR D 211 ARG D 217 -1 O GLU D 212 N VAL D 175 SHEET 8 AA1 8 GLU D 193 ILE D 194 -1 N GLU D 193 O SER D 215 SHEET 1 AA2 8 LYS A 47 ARG A 50 0 SHEET 2 AA2 8 LEU A 53 ARG A 61 -1 O VAL A 55 N TYR A 48 SHEET 3 AA2 8 TRP A 107 GLU A 113 -1 O TRP A 112 N SER A 56 SHEET 4 AA2 8 VAL A 117 GLU A 129 -1 O VAL A 117 N GLU A 113 SHEET 5 AA2 8 ASP A 132 LEU A 142 -1 O VAL A 134 N ASP A 127 SHEET 6 AA2 8 LYS A 170 PHE A 176 1 O MET A 172 N CYS A 137 SHEET 7 AA2 8 TYR A 211 ARG A 217 -1 O LEU A 214 N LEU A 173 SHEET 8 AA2 8 GLU A 193 ILE A 194 -1 N GLU A 193 O SER A 215 SSBOND 1 CYS D 26 CYS A 204 1555 3645 2.92 LINK N SER E 1 C2 CMC E 301 1555 1555 1.42 LINK C LYS E 5 N NH2 E 302 1555 1555 1.43 LINK N SER B 1 C2 CMC B 301 1555 1555 1.42 LINK C LYS B 5 N NH2 B 302 1555 1555 1.43 CRYST1 46.433 74.349 126.821 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021536 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013450 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007885 0.00000