HEADER VIRAL PROTEIN/RNA 28-OCT-20 7KL3 TITLE THE CRYSTAL STRUCTURE OF THE 2009/H1N1/CALIFORNIA PA ENDONUCLEASE TITLE 2 MUTANT E119D BOUND TO RNA OLIGOMER AG*CAUC (*UNCLEAVEABLE BOND, -UC TITLE 3 DISORDERED) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN PA-X; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: RNA (5'-R(P*AP*GP*CP*A)-3'); COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: GC BOND UNCLEAVABLE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 11320; SOURCE 4 VARIANT: H1N1/PAN09/CALIFORNIA; SOURCE 5 GENE: PA-X, PA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS NUCLEASE, INFLUENZA, INHIBITOR RESISTANCE, RNA OLIGOMER, UNCLEAVEABLE KEYWDS 2 BOND, VIRAL PROTEIN, VIRAL PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.G.CUYPERS,G.KUMAR,S.W.WHITE REVDAT 4 29-MAY-24 7KL3 1 COMPND REMARK HET HETNAM REVDAT 4 2 1 HETSYN FORMUL LINK ATOM REVDAT 3 18-OCT-23 7KL3 1 REMARK REVDAT 2 03-MAR-21 7KL3 1 JRNL REVDAT 1 03-FEB-21 7KL3 0 JRNL AUTH G.KUMAR,M.CUYPERS,R.R.WEBBY,T.R.WEBB,S.W.WHITE JRNL TITL STRUCTURAL INSIGHTS INTO THE SUBSTRATE SPECIFICITY OF THE JRNL TITL 2 ENDONUCLEASE ACTIVITY OF THE INFLUENZA VIRUS CAP-SNATCHING JRNL TITL 3 MECHANISM. JRNL REF NUCLEIC ACIDS RES. V. 49 1609 2021 JRNL REFN ESSN 1362-4962 JRNL PMID 33469660 JRNL DOI 10.1093/NAR/GKAA1294 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_3965 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 18905 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.490 REMARK 3 FREE R VALUE TEST SET COUNT : 1037 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.0000 - 3.8100 0.99 2707 146 0.1529 0.1751 REMARK 3 2 3.8100 - 3.0200 1.00 2577 156 0.1718 0.1874 REMARK 3 3 3.0200 - 2.6400 1.00 2540 130 0.1982 0.2556 REMARK 3 4 2.6400 - 2.4000 1.00 2522 160 0.1912 0.2366 REMARK 3 5 2.4000 - 2.2300 1.00 2510 161 0.2136 0.2749 REMARK 3 6 2.2300 - 2.1000 1.00 2511 140 0.2193 0.2596 REMARK 3 7 2.1000 - 1.9900 1.00 2501 144 0.2665 0.3131 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.252 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.063 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.017 1607 REMARK 3 ANGLE : 1.459 2181 REMARK 3 CHIRALITY : 0.092 234 REMARK 3 PLANARITY : 0.010 265 REMARK 3 DIHEDRAL : 17.480 598 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 2 ) REMARK 3 ORIGIN FOR THE GROUP (A):-234.2576 259.1142 284.6888 REMARK 3 T TENSOR REMARK 3 T11: 1.2819 T22: 1.2390 REMARK 3 T33: 1.4993 T12: 0.0551 REMARK 3 T13: 0.0076 T23: 0.2351 REMARK 3 L TENSOR REMARK 3 L11: 4.4779 L22: 4.3769 REMARK 3 L33: 3.6041 L12: 3.3300 REMARK 3 L13: -0.8029 L23: 1.9681 REMARK 3 S TENSOR REMARK 3 S11: -0.3751 S12: -0.2271 S13: 0.5068 REMARK 3 S21: -0.6156 S22: 2.4761 S23: -0.3266 REMARK 3 S31: -0.7696 S32: 0.7752 S33: -2.6280 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A):-242.3365 257.2543 272.5072 REMARK 3 T TENSOR REMARK 3 T11: 0.4557 T22: 0.5835 REMARK 3 T33: 0.3474 T12: 0.0243 REMARK 3 T13: 0.0258 T23: 0.1790 REMARK 3 L TENSOR REMARK 3 L11: 6.2227 L22: 7.4515 REMARK 3 L33: 9.3758 L12: -0.1238 REMARK 3 L13: -0.4976 L23: 4.1935 REMARK 3 S TENSOR REMARK 3 S11: -0.1555 S12: 0.1579 S13: 0.0701 REMARK 3 S21: -0.8202 S22: 0.0933 S23: -0.3465 REMARK 3 S31: -0.6650 S32: 0.8488 S33: 0.0921 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A):-246.0269 267.6019 285.4340 REMARK 3 T TENSOR REMARK 3 T11: 0.3629 T22: 0.4976 REMARK 3 T33: 0.3994 T12: 0.0038 REMARK 3 T13: -0.0904 T23: 0.1630 REMARK 3 L TENSOR REMARK 3 L11: 0.9052 L22: 4.8399 REMARK 3 L33: 1.9753 L12: 0.0073 REMARK 3 L13: 0.0074 L23: 1.7074 REMARK 3 S TENSOR REMARK 3 S11: -0.2881 S12: -0.0765 S13: 0.0918 REMARK 3 S21: -0.3391 S22: 0.0857 S23: 0.1152 REMARK 3 S31: -0.1508 S32: 0.5684 S33: 0.1857 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A):-241.1609 266.3251 294.1194 REMARK 3 T TENSOR REMARK 3 T11: 0.3333 T22: 0.6095 REMARK 3 T33: 0.3514 T12: 0.0492 REMARK 3 T13: -0.1143 T23: 0.1235 REMARK 3 L TENSOR REMARK 3 L11: 2.5085 L22: 5.9709 REMARK 3 L33: 1.9649 L12: -1.0585 REMARK 3 L13: 0.5400 L23: 0.2043 REMARK 3 S TENSOR REMARK 3 S11: -0.2187 S12: -0.3004 S13: -0.0823 REMARK 3 S21: 0.4227 S22: 0.1333 S23: -0.4781 REMARK 3 S31: 0.0730 S32: 0.6284 S33: 0.1218 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A):-243.6853 258.4684 296.4323 REMARK 3 T TENSOR REMARK 3 T11: 0.3646 T22: 0.5623 REMARK 3 T33: 0.3573 T12: 0.0895 REMARK 3 T13: -0.0746 T23: 0.1641 REMARK 3 L TENSOR REMARK 3 L11: 3.3449 L22: 5.1540 REMARK 3 L33: 3.7795 L12: -0.2224 REMARK 3 L13: 0.6128 L23: 2.0097 REMARK 3 S TENSOR REMARK 3 S11: -0.2449 S12: -0.3119 S13: 0.0534 REMARK 3 S21: 0.6378 S22: 0.2349 S23: -0.2986 REMARK 3 S31: 0.1799 S32: 0.7917 S33: -0.0047 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE UNCLEAVABLE BASE *C BEARING THE REMARK 3 SULFUR ATOM INSTEAD OF PHOSPHATE HAS A SLIGHTLY SHORTER S-O BOND REMARK 3 LENGTH THAN NORMAL ON THE SIDE OF THE NEIGHBORING BASE REMARK 4 REMARK 4 7KL3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-OCT-20. REMARK 100 THE DEPOSITION ID IS D_1000252652. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18911 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5VPT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.8, 1 M AMMONIUM REMARK 280 SULFATE, 0.1M MGCL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 44.60100 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 44.60100 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 67.12300 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 44.60100 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 44.60100 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 67.12300 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 44.60100 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 44.60100 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 67.12300 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 44.60100 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 44.60100 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 67.12300 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 44.60100 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 44.60100 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 67.12300 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 44.60100 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 44.60100 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 67.12300 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 44.60100 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 44.60100 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 67.12300 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 44.60100 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 44.60100 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 67.12300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 413 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 SER A 194 REMARK 465 GLU A 195 REMARK 465 ARG A 196 REMARK 465 C B 3 REMARK 465 A B 4 REMARK 465 U B 5 REMARK 465 C B 6 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 15 CD OE1 OE2 REMARK 470 ARG A 84 NE CZ NH1 NH2 REMARK 470 LYS A 102 NZ REMARK 470 LYS A 104 NZ REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 LYS A 142 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N HIS A 74 O HOH A 301 2.15 REMARK 500 O4 RQA B 202 O HOH B 301 2.16 REMARK 500 O3' G B 2 O7 RQA B 202 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 139 19.28 46.06 REMARK 500 SER A 140 44.99 -93.74 REMARK 500 GLU A 141 -56.17 12.59 REMARK 500 THR A 162 -57.99 66.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6W7A RELATED DB: PDB REMARK 900 RELATED ID: 6WHM RELATED DB: PDB REMARK 900 RELATED ID: 6WS3 RELATED DB: PDB DBREF1 7KL3 A 1 50 UNP A0A4P2TE19_9INFA DBREF2 7KL3 A A0A4P2TE19 1 50 DBREF1 7KL3 A 73 196 UNP A0A646SQW7_9INFA DBREF2 7KL3 A A0A646SQW7 73 196 DBREF 7KL3 B 1 6 PDB 7KL3 7KL3 1 6 SEQADV 7KL3 MET A -19 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 GLY A -18 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 SER A -17 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 SER A -16 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 HIS A -15 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 HIS A -14 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 HIS A -13 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 HIS A -12 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 HIS A -11 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 HIS A -10 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 SER A -9 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 SER A -8 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 GLY A -7 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 LEU A -6 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 VAL A -5 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 PRO A -4 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 ARG A -3 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 GLY A -2 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 SER A -1 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 HIS A 0 UNP A0A4P2TE1 EXPRESSION TAG SEQADV 7KL3 GLY A 51 UNP A0A4P2TE1 LINKER SEQADV 7KL3 GLY A 52 UNP A0A4P2TE1 LINKER SEQADV 7KL3 SER A 53 UNP A0A4P2TE1 LINKER SEQADV 7KL3 ILE A 85 UNP A0A646SQW THR 85 CONFLICT SEQADV 7KL3 ASP A 119 UNP A0A646SQW GLU 119 ENGINEERED MUTATION SEQADV 7KL3 SER A 186 UNP A0A646SQW GLY 186 CONFLICT SEQRES 1 A 197 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 197 LEU VAL PRO ARG GLY SER HIS MET GLU ASP PHE VAL ARG SEQRES 3 A 197 GLN CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS SEQRES 4 A 197 ALA MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR SEQRES 5 A 197 ASN LYS PHE ALA ALA ILE CYS THR HIS LEU GLU VAL CYS SEQRES 6 A 197 PHE MET TYR SER ASP GLY GLY SER LYS HIS ARG PHE GLU SEQRES 7 A 197 ILE ILE GLU GLY ARG ASP ARG ILE MET ALA TRP THR VAL SEQRES 8 A 197 VAL ASN SER ILE CYS ASN THR THR GLY VAL GLU LYS PRO SEQRES 9 A 197 LYS PHE LEU PRO ASP LEU TYR ASP TYR LYS GLU ASN ARG SEQRES 10 A 197 PHE ILE ASP ILE GLY VAL THR ARG ARG GLU VAL HIS ILE SEQRES 11 A 197 TYR TYR LEU GLU LYS ALA ASN LYS ILE LYS SER GLU LYS SEQRES 12 A 197 THR HIS ILE HIS ILE PHE SER PHE THR GLY GLU GLU MET SEQRES 13 A 197 ALA THR LYS ALA ASP TYR THR LEU ASP GLU GLU SER ARG SEQRES 14 A 197 ALA ARG ILE LYS THR ARG LEU PHE THR ILE ARG GLN GLU SEQRES 15 A 197 MET ALA SER ARG SER LEU TRP ASP SER PHE ARG GLN SER SEQRES 16 A 197 GLU ARG SEQRES 1 B 6 A G C A U C HET GOL A 201 6 HET SO4 A 202 5 HET SO4 A 203 5 HET AMP B 201 22 HET RQA B 202 20 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM RQA 5'-O-SULFOCYTIDINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 AMP C10 H14 N5 O7 P FORMUL 7 RQA C9 H13 N3 O8 S FORMUL 8 HOH *120(H2 O) HELIX 1 AA1 SER A -1 PHE A 9 1 11 HELIX 2 AA2 ASN A 10 TYR A 24 1 15 HELIX 3 AA3 GLU A 31 GLY A 51 1 21 HELIX 4 AA4 ASP A 83 GLY A 99 1 17 HELIX 5 AA5 GLU A 126 LYS A 139 1 14 HELIX 6 AA6 LYS A 158 ASP A 160 5 3 HELIX 7 AA7 ASP A 164 ARG A 185 1 22 HELIX 8 AA8 LEU A 187 ARG A 192 1 6 SHEET 1 AA1 5 PHE A 76 ILE A 78 0 SHEET 2 AA1 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77 SHEET 3 AA1 5 ARG A 116 THR A 123 -1 O ARG A 116 N ASP A 111 SHEET 4 AA1 5 HIS A 144 SER A 149 1 O HIS A 144 N ASP A 119 SHEET 5 AA1 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147 LINK O3' G B 2 S1 RQA B 202 1555 1555 1.47 LINK P AMP B 201 O5 RQA B 202 1555 1555 1.61 CRYST1 89.202 89.202 134.246 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011211 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011211 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007449 0.00000