HEADER MOTOR PROTEIN 30-OCT-20 7KLJ TITLE CRYSTAL STRUCTURE OF THE WD-REPEAT DOMAIN OF HUMAN KIF21A COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 2 OF KINESIN-LIKE PROTEIN KIF21A; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: WD REPEAT (UNP RESIDUES 1324-1640); COMPND 5 SYNONYM: KINESIN-LIKE PROTEIN KIF2,RENAL CARCINOMA ANTIGEN NY-REN-62; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KIF21A, KIAA1708, KIF2; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFBOH-MHL KEYWDS KIF21A, WD-REPEAT, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.ZENG,A.DONG,P.LOPPNAU,A.HUTCHINSON,A.SEITOVA,A.M.EDWARDS, AUTHOR 2 C.H.ARROWSMITH,L.HALABELIAN,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 06-MAR-24 7KLJ 1 REMARK REVDAT 1 16-DEC-20 7KLJ 0 JRNL AUTH H.ZENG,A.DONG,P.LOPPNAU,A.HUTCHINSON,A.SEITOVA,A.M.EDWARDS, JRNL AUTH 2 C.H.ARROWSMITH,L.HALABELIAN JRNL TITL CRYSTAL STRUCTURE OF THE WD-REPEAT DOMAIN OF HUMAN KIF21A JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.52 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.52 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.20 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 87717 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1307 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.52 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5873 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.3210 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4836 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 548 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.27000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : -0.32000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.52000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.076 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.071 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.044 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.167 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.963 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5136 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4637 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7022 ; 1.439 ; 1.631 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10791 ; 1.382 ; 1.574 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 679 ; 7.595 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 219 ;34.202 ;23.699 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 831 ;11.167 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;16.366 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 704 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5877 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1018 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7KLJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1000252641. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-E SUPERBRIGHT REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN A200 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89050 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.520 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.52 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.42400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG3350, 0.2 M AMMONIUM ACETATE, REMARK 280 0.1 M HEPES, PH 7.4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.53350 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1319 REMARK 465 HIS A 1320 REMARK 465 HIS A 1321 REMARK 465 HIS A 1322 REMARK 465 HIS A 1323 REMARK 465 HIS A 1324 REMARK 465 HIS A 1325 REMARK 465 SER A 1326 REMARK 465 SER A 1327 REMARK 465 GLY A 1328 REMARK 465 ARG A 1329 REMARK 465 MET B 1319 REMARK 465 HIS B 1320 REMARK 465 HIS B 1321 REMARK 465 HIS B 1322 REMARK 465 HIS B 1323 REMARK 465 HIS B 1324 REMARK 465 HIS B 1325 REMARK 465 SER B 1326 REMARK 465 SER B 1327 REMARK 465 GLY B 1328 REMARK 465 ARG B 1329 REMARK 465 GLU B 1330 REMARK 465 ASN B 1331 REMARK 465 SER B 1438 REMARK 465 ALA B 1439 REMARK 465 SER B 1440 REMARK 465 THR B 1441 REMARK 465 SER B 1442 REMARK 465 ARG B 1443 REMARK 465 THR B 1444 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1330 CG CD OE1 OE2 REMARK 470 GLN A1338 OE1 NE2 REMARK 470 LYS A1420 CE NZ REMARK 470 GLN A1430 CD OE1 NE2 REMARK 470 SER A1438 OG REMARK 470 LYS A1480 NZ REMARK 470 ARG A1481 CD NE CZ NH1 NH2 REMARK 470 LYS A1487 CE NZ REMARK 470 ILE A1503 CG1 CG2 CD1 REMARK 470 SER A1504 OG REMARK 470 SER A1505 OG REMARK 470 LYS A1584 NZ REMARK 470 LYS A1623 CE NZ REMARK 470 LEU B1332 CG CD1 CD2 REMARK 470 GLN B1338 CD OE1 NE2 REMARK 470 ASN B1397 CG OD1 ND2 REMARK 470 TYR B1398 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL B1445 CG1 CG2 REMARK 470 LYS B1480 NZ REMARK 470 ILE B1503 CD1 REMARK 470 GLU B1526 CG CD OE1 OE2 REMARK 470 LYS B1573 NZ REMARK 470 LYS B1584 NZ REMARK 470 ASP B1614 OD1 OD2 REMARK 470 LYS B1623 NZ REMARK 470 ARG B1646 NH1 NH2 REMARK 470 LYS B1652 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 1871 O HOH B 2068 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A1652 C ALA A1654 N 0.205 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A1388 -155.72 -158.68 REMARK 500 THR A1407 -120.61 41.93 REMARK 500 HIS A1517 0.82 81.68 REMARK 500 ASP A1595 -0.37 75.17 REMARK 500 ASP A1626 33.58 -89.43 REMARK 500 SER A1627 146.35 179.33 REMARK 500 ASN A1635 -156.18 -122.66 REMARK 500 ASN B1388 -156.99 -155.00 REMARK 500 THR B1407 -119.90 40.27 REMARK 500 HIS B1517 -7.55 90.44 REMARK 500 GLU B1526 113.39 -31.31 REMARK 500 ASP B1626 41.18 -88.21 REMARK 500 ASP B1626 48.34 -88.21 REMARK 500 SER B1627 147.26 -174.18 REMARK 500 ASN B1635 -159.67 -128.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP B 1595 HIS B 1596 149.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2071 DISTANCE = 6.69 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 1701 DBREF 7KLJ A 1337 1654 UNP Q7Z4S6 KI21A_HUMAN 1324 1640 DBREF 7KLJ B 1337 1653 UNP Q7Z4S6 KI21A_HUMAN 1324 1640 SEQADV 7KLJ MET A 1319 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ HIS A 1320 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ HIS A 1321 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ HIS A 1322 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ HIS A 1323 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ HIS A 1324 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ HIS A 1325 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ SER A 1326 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ SER A 1327 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ GLY A 1328 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ ARG A 1329 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ GLU A 1330 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ ASN A 1331 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ LEU A 1332 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ TYR A 1333 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ PHE A 1334 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ GLN A 1335 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ GLY A 1336 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ MET B 1319 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ HIS B 1320 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ HIS B 1321 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ HIS B 1322 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ HIS B 1323 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ HIS B 1324 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ HIS B 1325 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ SER B 1326 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ SER B 1327 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ GLY B 1328 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ ARG B 1329 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ GLU B 1330 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ ASN B 1331 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ LEU B 1332 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ TYR B 1333 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ PHE B 1334 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ GLN B 1335 UNP Q7Z4S6 EXPRESSION TAG SEQADV 7KLJ GLY B 1336 UNP Q7Z4S6 EXPRESSION TAG SEQRES 1 A 335 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 335 LEU TYR PHE GLN GLY LEU GLN CYS ILE HIS ILE ALA GLU SEQRES 3 A 335 GLY HIS THR LYS ALA VAL LEU CYS VAL ASP SER THR ASP SEQRES 4 A 335 ASP LEU LEU PHE THR GLY SER LYS ASP ARG THR CYS LYS SEQRES 5 A 335 VAL TRP ASN LEU VAL THR GLY GLN GLU ILE MET SER LEU SEQRES 6 A 335 GLY GLY HIS PRO ASN ASN VAL VAL SER VAL LYS TYR CYS SEQRES 7 A 335 ASN TYR THR SER LEU VAL PHE THR VAL SER THR SER TYR SEQRES 8 A 335 ILE LYS VAL TRP ASP ILE ARG ASP SER ALA LYS CYS ILE SEQRES 9 A 335 ARG THR LEU THR SER SER GLY GLN VAL THR LEU GLY ASP SEQRES 10 A 335 ALA CYS SER ALA SER THR SER ARG THR VAL ALA ILE PRO SEQRES 11 A 335 SER GLY GLU ASN GLN ILE ASN GLN ILE ALA LEU ASN PRO SEQRES 12 A 335 THR GLY THR PHE LEU TYR ALA ALA SER GLY ASN ALA VAL SEQRES 13 A 335 ARG MET TRP ASP LEU LYS ARG PHE GLN SER THR GLY LYS SEQRES 14 A 335 LEU THR GLY HIS LEU GLY PRO VAL MET CYS LEU THR VAL SEQRES 15 A 335 ASP GLN ILE SER SER GLY GLN ASP LEU ILE ILE THR GLY SEQRES 16 A 335 SER LYS ASP HIS TYR ILE LYS MET PHE ASP VAL THR GLU SEQRES 17 A 335 GLY ALA LEU GLY THR VAL SER PRO THR HIS ASN PHE GLU SEQRES 18 A 335 PRO PRO HIS TYR ASP GLY ILE GLU ALA LEU THR ILE GLN SEQRES 19 A 335 GLY ASP ASN LEU PHE SER GLY SER ARG ASP ASN GLY ILE SEQRES 20 A 335 LYS LYS TRP ASP LEU THR GLN LYS ASP LEU LEU GLN GLN SEQRES 21 A 335 VAL PRO ASN ALA HIS LYS ASP TRP VAL CYS ALA LEU GLY SEQRES 22 A 335 VAL VAL PRO ASP HIS PRO VAL LEU LEU SER GLY CYS ARG SEQRES 23 A 335 GLY GLY ILE LEU LYS VAL TRP ASN MET ASP THR PHE MET SEQRES 24 A 335 PRO VAL GLY GLU MET LYS GLY HIS ASP SER PRO ILE ASN SEQRES 25 A 335 ALA ILE CYS VAL ASN SER THR HIS ILE PHE THR ALA ALA SEQRES 26 A 335 ASP ASP ARG THR VAL ARG ILE TRP LYS ALA SEQRES 1 B 335 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 B 335 LEU TYR PHE GLN GLY LEU GLN CYS ILE HIS ILE ALA GLU SEQRES 3 B 335 GLY HIS THR LYS ALA VAL LEU CYS VAL ASP SER THR ASP SEQRES 4 B 335 ASP LEU LEU PHE THR GLY SER LYS ASP ARG THR CYS LYS SEQRES 5 B 335 VAL TRP ASN LEU VAL THR GLY GLN GLU ILE MET SER LEU SEQRES 6 B 335 GLY GLY HIS PRO ASN ASN VAL VAL SER VAL LYS TYR CYS SEQRES 7 B 335 ASN TYR THR SER LEU VAL PHE THR VAL SER THR SER TYR SEQRES 8 B 335 ILE LYS VAL TRP ASP ILE ARG ASP SER ALA LYS CYS ILE SEQRES 9 B 335 ARG THR LEU THR SER SER GLY GLN VAL THR LEU GLY ASP SEQRES 10 B 335 ALA CYS SER ALA SER THR SER ARG THR VAL ALA ILE PRO SEQRES 11 B 335 SER GLY GLU ASN GLN ILE ASN GLN ILE ALA LEU ASN PRO SEQRES 12 B 335 THR GLY THR PHE LEU TYR ALA ALA SER GLY ASN ALA VAL SEQRES 13 B 335 ARG MET TRP ASP LEU LYS ARG PHE GLN SER THR GLY LYS SEQRES 14 B 335 LEU THR GLY HIS LEU GLY PRO VAL MET CYS LEU THR VAL SEQRES 15 B 335 ASP GLN ILE SER SER GLY GLN ASP LEU ILE ILE THR GLY SEQRES 16 B 335 SER LYS ASP HIS TYR ILE LYS MET PHE ASP VAL THR GLU SEQRES 17 B 335 GLY ALA LEU GLY THR VAL SER PRO THR HIS ASN PHE GLU SEQRES 18 B 335 PRO PRO HIS TYR ASP GLY ILE GLU ALA LEU THR ILE GLN SEQRES 19 B 335 GLY ASP ASN LEU PHE SER GLY SER ARG ASP ASN GLY ILE SEQRES 20 B 335 LYS LYS TRP ASP LEU THR GLN LYS ASP LEU LEU GLN GLN SEQRES 21 B 335 VAL PRO ASN ALA HIS LYS ASP TRP VAL CYS ALA LEU GLY SEQRES 22 B 335 VAL VAL PRO ASP HIS PRO VAL LEU LEU SER GLY CYS ARG SEQRES 23 B 335 GLY GLY ILE LEU LYS VAL TRP ASN MET ASP THR PHE MET SEQRES 24 B 335 PRO VAL GLY GLU MET LYS GLY HIS ASP SER PRO ILE ASN SEQRES 25 B 335 ALA ILE CYS VAL ASN SER THR HIS ILE PHE THR ALA ALA SEQRES 26 B 335 ASP ASP ARG THR VAL ARG ILE TRP LYS ALA HET EDO A1701 4 HET UNX A1702 1 HET UNX A1703 1 HET UNX A1704 1 HET UNX A1705 1 HET EDO B1701 4 HET UNX B1702 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM UNX UNKNOWN ATOM OR ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 2(C2 H6 O2) FORMUL 4 UNX 5(X) FORMUL 10 HOH *548(H2 O) SHEET 1 AA1 4 GLN A1338 GLU A1344 0 SHEET 2 AA1 4 THR A1647 LYS A1652 -1 O VAL A1648 N ALA A1343 SHEET 3 AA1 4 ILE A1639 ALA A1643 -1 N ILE A1639 O TRP A1651 SHEET 4 AA1 4 ILE A1629 VAL A1634 -1 N ASN A1630 O ALA A1642 SHEET 1 AA2 4 VAL A1350 SER A1355 0 SHEET 2 AA2 4 LEU A1359 SER A1364 -1 O PHE A1361 N ASP A1354 SHEET 3 AA2 4 CYS A1369 ASN A1373 -1 O TRP A1372 N LEU A1360 SHEET 4 AA2 4 GLU A1379 LEU A1383 -1 O LEU A1383 N CYS A1369 SHEET 1 AA3 5 SER A1392 CYS A1396 0 SHEET 2 AA3 5 LEU A1401 SER A1406 -1 O PHE A1403 N LYS A1394 SHEET 3 AA3 5 TYR A1409 ASP A1414 -1 O TRP A1413 N VAL A1402 SHEET 4 AA3 5 LYS A1420 THR A1426 -1 O ARG A1423 N VAL A1412 SHEET 5 AA3 5 VAL A1431 LEU A1433 -1 O THR A1432 N THR A1424 SHEET 1 AA4 5 ILE A1454 LEU A1459 0 SHEET 2 AA4 5 PHE A1465 SER A1470 -1 O TYR A1467 N ALA A1458 SHEET 3 AA4 5 ALA A1473 ASP A1478 -1 O ARG A1475 N ALA A1468 SHEET 4 AA4 5 GLN A1483 LEU A1488 -1 O LEU A1488 N VAL A1474 SHEET 5 AA4 5 GLY A1530 VAL A1532 1 O GLY A1530 N THR A1485 SHEET 1 AA5 4 VAL A1495 SER A1504 0 SHEET 2 AA5 4 GLN A1507 SER A1514 -1 O LEU A1509 N ASP A1501 SHEET 3 AA5 4 ILE A1519 THR A1525 -1 O VAL A1524 N ASP A1508 SHEET 4 AA5 4 HIS A1536 ASN A1537 -1 O HIS A1536 N MET A1521 SHEET 1 AA6 4 ILE A1546 GLN A1552 0 SHEET 2 AA6 4 ASN A1555 SER A1560 -1 O PHE A1557 N THR A1550 SHEET 3 AA6 4 ILE A1565 ASP A1569 -1 O TRP A1568 N LEU A1556 SHEET 4 AA6 4 ASP A1574 VAL A1579 -1 O LEU A1576 N LYS A1567 SHEET 1 AA7 4 VAL A1587 VAL A1592 0 SHEET 2 AA7 4 VAL A1598 CYS A1603 -1 O LEU A1600 N GLY A1591 SHEET 3 AA7 4 ILE A1607 ASN A1612 -1 O LYS A1609 N SER A1601 SHEET 4 AA7 4 PRO A1618 LYS A1623 -1 O VAL A1619 N VAL A1610 SHEET 1 AA8 4 GLN B1338 ALA B1343 0 SHEET 2 AA8 4 VAL B1648 LYS B1652 -1 O ILE B1650 N HIS B1341 SHEET 3 AA8 4 ILE B1639 ALA B1643 -1 N ILE B1639 O TRP B1651 SHEET 4 AA8 4 ILE B1629 VAL B1634 -1 N ASN B1630 O ALA B1642 SHEET 1 AA9 4 VAL B1350 SER B1355 0 SHEET 2 AA9 4 LEU B1359 SER B1364 -1 O PHE B1361 N ASP B1354 SHEET 3 AA9 4 CYS B1369 ASN B1373 -1 O TRP B1372 N LEU B1360 SHEET 4 AA9 4 GLU B1379 LEU B1383 -1 O LEU B1383 N CYS B1369 SHEET 1 AB1 5 SER B1392 CYS B1396 0 SHEET 2 AB1 5 LEU B1401 SER B1406 -1 O PHE B1403 N LYS B1394 SHEET 3 AB1 5 TYR B1409 ASP B1414 -1 O TRP B1413 N VAL B1402 SHEET 4 AB1 5 LYS B1420 THR B1426 -1 O LEU B1425 N ILE B1410 SHEET 5 AB1 5 VAL B1431 LEU B1433 -1 O THR B1432 N THR B1424 SHEET 1 AB2 5 ILE B1454 LEU B1459 0 SHEET 2 AB2 5 PHE B1465 SER B1470 -1 O TYR B1467 N ALA B1458 SHEET 3 AB2 5 ALA B1473 ASP B1478 -1 O ARG B1475 N ALA B1468 SHEET 4 AB2 5 GLN B1483 LEU B1488 -1 O LEU B1488 N VAL B1474 SHEET 5 AB2 5 GLY B1530 VAL B1532 1 O VAL B1532 N LYS B1487 SHEET 1 AB3 4 VAL B1495 SER B1504 0 SHEET 2 AB3 4 GLN B1507 SER B1514 -1 O ILE B1511 N THR B1499 SHEET 3 AB3 4 ILE B1519 THR B1525 -1 O PHE B1522 N ILE B1510 SHEET 4 AB3 4 HIS B1536 ASN B1537 -1 O HIS B1536 N MET B1521 SHEET 1 AB4 4 ILE B1546 GLN B1552 0 SHEET 2 AB4 4 ASN B1555 SER B1560 -1 O PHE B1557 N THR B1550 SHEET 3 AB4 4 ILE B1565 ASP B1569 -1 O TRP B1568 N LEU B1556 SHEET 4 AB4 4 ASP B1574 VAL B1579 -1 O ASP B1574 N ASP B1569 SHEET 1 AB5 4 VAL B1587 VAL B1592 0 SHEET 2 AB5 4 VAL B1598 CYS B1603 -1 O LEU B1600 N GLY B1591 SHEET 3 AB5 4 ILE B1607 ASN B1612 -1 O LYS B1609 N SER B1601 SHEET 4 AB5 4 PRO B1618 LYS B1623 -1 O MET B1622 N LEU B1608 CISPEP 1 GLU A 1539 PRO A 1540 0 -8.28 CISPEP 2 GLU B 1539 PRO B 1540 0 4.51 SITE 1 AC1 3 PRO A1448 SER A1449 HOH A1821 SITE 1 AC2 6 LEU B1492 ASP B1516 TYR B1518 LYS B1520 SITE 2 AC2 6 ASN B1537 HOH B1816 CRYST1 55.275 67.067 79.880 90.00 94.43 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018091 0.000000 0.001403 0.00000 SCALE2 0.000000 0.014910 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012556 0.00000