HEADER HYDROLASE 04-NOV-20 7KNC TITLE CRYSTAL STRUCTURE OF THE GH31 ALPHA-XYLOSIDASE (XAC1773) FROM TITLE 2 XANTHOMONAS CITRI COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-XYLOSIDASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: XANTHOMONAS AXONOPODIS PV. CITRI (STRAIN 306); SOURCE 3 ORGANISM_TAXID: 190486; SOURCE 4 STRAIN: 306; SOURCE 5 GENE: XYLS, XAC1773; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS GLYCOSIDE HYDROLASE FAMILY GH31, XYLOGLUCAN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.S.VIEIRA,M.T.MURAKAMI REVDAT 3 18-OCT-23 7KNC 1 REMARK REVDAT 2 07-JUL-21 7KNC 1 JRNL REVDAT 1 26-MAY-21 7KNC 0 JRNL AUTH P.S.VIEIRA,I.M.BONFIM,E.A.ARAUJO,R.R.MELO,A.R.LIMA, JRNL AUTH 2 M.R.FESSEL,D.A.A.PAIXAO,G.F.PERSINOTI,S.A.ROCCO,T.B.LIMA, JRNL AUTH 3 R.A.S.PIROLLA,M.A.B.MORAIS,J.B.L.CORREA,L.M.ZANPHORLIN, JRNL AUTH 4 J.A.DIOGO,E.A.LIMA,A.GRANDIS,M.S.BUCKERIDGE,F.C.GOZZO, JRNL AUTH 5 C.E.BENEDETTI,I.POLIKARPOV,P.O.GIUSEPPE,M.T.MURAKAMI JRNL TITL XYLOGLUCAN PROCESSING MACHINERY IN XANTHOMONAS PATHOGENS AND JRNL TITL 2 ITS ROLE IN THE TRANSCRIPTIONAL ACTIVATION OF VIRULENCE JRNL TITL 3 FACTORS JRNL REF NATURE COMMUNICATIONS V. 12 4049 2021 JRNL DOI 10.1038/S41467-021-24277-4 REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_3139 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 88980 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 4468 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.6280 - 5.8121 0.99 3092 154 0.1500 0.1501 REMARK 3 2 5.8121 - 4.6157 1.00 2965 147 0.1350 0.1350 REMARK 3 3 4.6157 - 4.0330 1.00 2928 159 0.1330 0.1701 REMARK 3 4 4.0330 - 3.6645 1.00 2891 158 0.1533 0.1760 REMARK 3 5 3.6645 - 3.4020 1.00 2919 134 0.1658 0.1907 REMARK 3 6 3.4020 - 3.2016 1.00 2876 146 0.1745 0.1972 REMARK 3 7 3.2016 - 3.0413 1.00 2868 166 0.2085 0.2560 REMARK 3 8 3.0413 - 2.9090 1.00 2874 154 0.2005 0.2298 REMARK 3 9 2.9090 - 2.7970 1.00 2838 160 0.1839 0.2422 REMARK 3 10 2.7970 - 2.7005 1.00 2873 158 0.1824 0.2076 REMARK 3 11 2.7005 - 2.6161 1.00 2822 150 0.1881 0.2487 REMARK 3 12 2.6161 - 2.5413 1.00 2810 185 0.1897 0.2227 REMARK 3 13 2.5413 - 2.4744 1.00 2860 152 0.2011 0.2584 REMARK 3 14 2.4744 - 2.4141 1.00 2826 160 0.1922 0.2583 REMARK 3 15 2.4141 - 2.3592 1.00 2836 148 0.1882 0.2438 REMARK 3 16 2.3592 - 2.3090 0.98 2835 131 0.2067 0.2399 REMARK 3 17 2.3090 - 2.2628 0.99 2800 146 0.2373 0.2849 REMARK 3 18 2.2628 - 2.2201 1.00 2812 165 0.2022 0.2397 REMARK 3 19 2.2201 - 2.1805 1.00 2825 153 0.1926 0.2393 REMARK 3 20 2.1805 - 2.1435 1.00 2872 142 0.1969 0.2378 REMARK 3 21 2.1435 - 2.1089 0.98 2754 149 0.2516 0.3025 REMARK 3 22 2.1089 - 2.0765 0.99 2822 151 0.2464 0.3312 REMARK 3 23 2.0765 - 2.0460 1.00 2810 145 0.2184 0.2428 REMARK 3 24 2.0460 - 2.0171 1.00 2833 146 0.2112 0.2744 REMARK 3 25 2.0171 - 1.9899 1.00 2806 153 0.1996 0.2470 REMARK 3 26 1.9899 - 1.9640 1.00 2797 149 0.2063 0.2469 REMARK 3 27 1.9640 - 1.9395 0.99 2837 145 0.2632 0.3524 REMARK 3 28 1.9395 - 1.9161 0.92 2587 136 0.3642 0.4099 REMARK 3 29 1.9161 - 1.8938 0.76 2168 104 0.5002 0.5504 REMARK 3 30 1.8938 - 1.8730 0.94 2676 122 0.4901 0.5098 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7KNC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-NOV-20. REMARK 100 THE DEPOSITION ID IS D_1000252182. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.459000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89567 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 38.628 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.660 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2XVG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 MOL/L POTASSIUM FORMATE 20% PEG REMARK 280 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 58.74650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 73.31600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 58.74650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 73.31600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 ILE A 0 REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 THR A 3 REMARK 465 THR A 4 REMARK 465 ILE A 5 REMARK 465 ARG A 6 REMARK 465 SER A 7 REMARK 465 ALA A 8 REMARK 465 GLY A 9 REMARK 465 ALA A 10 REMARK 465 MET A 11 REMARK 465 PRO A 12 REMARK 465 ALA A 13 REMARK 465 ASN A 14 REMARK 465 ARG A 15 REMARK 465 ARG A 16 REMARK 465 THR A 17 REMARK 465 SER A 18 REMARK 465 LEU A 19 REMARK 465 ALA A 20 REMARK 465 GLN A 21 REMARK 465 CYS A 22 REMARK 465 LEU A 23 REMARK 465 ALA A 24 REMARK 465 LEU A 25 REMARK 465 SER A 26 REMARK 465 LEU A 27 REMARK 465 ALA A 28 REMARK 465 LEU A 29 REMARK 465 LEU A 30 REMARK 465 ALA A 31 REMARK 465 ASN A 32 REMARK 465 ALA A 33 REMARK 465 ALA A 34 REMARK 465 HIS A 35 REMARK 465 ALA A 36 REMARK 465 GLN A 37 REMARK 465 GLU A 38 REMARK 465 LYS A 958 REMARK 465 ILE A 959 REMARK 465 ALA A 960 REMARK 465 SER A 961 REMARK 465 GLY A 962 REMARK 465 LYS A 963 REMARK 465 ALA A 964 REMARK 465 ARG A 965 REMARK 465 ARG A 966 REMARK 465 ARG A 967 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 204 50.48 73.65 REMARK 500 GLU A 309 -155.01 57.25 REMARK 500 LEU A 553 -50.88 -124.13 REMARK 500 ASP A 566 36.34 -97.72 REMARK 500 THR A 815 -31.05 -130.72 REMARK 500 LYS A 881 -40.69 -132.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1894 DISTANCE = 6.86 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1001 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 610 O REMARK 620 2 ASP A 610 OD1 62.4 REMARK 620 3 ASP A 614 O 84.1 146.4 REMARK 620 4 ASP A 614 OD1 111.2 120.5 72.7 REMARK 620 5 LYS A 616 O 146.3 114.2 91.5 99.2 REMARK 620 6 HOH A1333 O 109.3 56.8 147.9 75.2 92.0 REMARK 620 N 1 2 3 4 5 DBREF 7KNC A 0 967 UNP Q8PLM2 Q8PLM2_XANAC 69 1036 SEQADV 7KNC MET A -20 UNP Q8PLM2 INITIATING METHIONINE SEQADV 7KNC GLY A -19 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC SER A -18 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC SER A -17 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC HIS A -16 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC HIS A -15 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC HIS A -14 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC HIS A -13 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC HIS A -12 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC HIS A -11 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC SER A -10 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC SER A -9 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC GLY A -8 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC LEU A -7 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC VAL A -6 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC PRO A -5 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC ARG A -4 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC GLY A -3 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC SER A -2 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC HIS A -1 UNP Q8PLM2 EXPRESSION TAG SEQADV 7KNC VAL A 295 UNP Q8PLM2 ALA 364 ENGINEERED MUTATION SEQRES 1 A 988 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 988 LEU VAL PRO ARG GLY SER HIS ILE MET GLN THR THR ILE SEQRES 3 A 988 ARG SER ALA GLY ALA MET PRO ALA ASN ARG ARG THR SER SEQRES 4 A 988 LEU ALA GLN CYS LEU ALA LEU SER LEU ALA LEU LEU ALA SEQRES 5 A 988 ASN ALA ALA HIS ALA GLN GLU VAL ARG LYS ALA ALA ASP SEQRES 6 A 988 GLY VAL THR VAL VAL PRO SER ALA LYS GLY ALA ALA PRO SEQRES 7 A 988 VAL ARG LEU GLN VAL VAL ASP ALA GLY ILE ILE ARG VAL SEQRES 8 A 988 SER ALA ASP PRO ASP GLY ASP PHE ALA ARG SER PRO SER SEQRES 9 A 988 LEU MET ARG VAL PRO VAL GLN GLY ASP THR ALA PHE GLN SEQRES 10 A 988 VAL ALA GLU GLN GLY ASP SER VAL GLN LEU LYS THR GLY SEQRES 11 A 988 LYS VAL THR ALA SER ILE SER THR VAL ASP GLY HIS VAL SEQRES 12 A 988 SER PHE ALA ASP ALA ASN GLY LYS PRO VAL LEU SER GLU SEQRES 13 A 988 VAL ALA GLY GLY ARG SER PHE ALA PRO LEU ASN VAL GLU SEQRES 14 A 988 GLY LYS GLN TYR LEU SER VAL ARG GLN ARG PHE GLN SER SEQRES 15 A 988 PRO ASP ASP GLU ALA LEU TYR GLY PHE GLY GLN HIS GLN SEQRES 16 A 988 GLN GLY TRP MET ASN GLN LYS GLY ARG ASN VAL GLU LEU SEQRES 17 A 988 GLN GLN ASN ASN ILE ASP MET ALA VAL PRO TYR LEU VAL SEQRES 18 A 988 SER SER ARG ASN TYR GLY LEU LEU TRP ASP ASN ASN SER SEQRES 19 A 988 ILE THR ARG LEU GLY ASP PRO ARG GLY LEU GLN PRO LEU SEQRES 20 A 988 PRO LYS THR LEU THR LEU TYR ASP ALA LYS GLY LYS ALA SEQRES 21 A 988 GLY ALA LEU THR ALA ARG TYR ALA ILE ASN GLY LYS HIS SEQRES 22 A 988 ILE LEU GLU ARG ARG GLU SER GLU VAL ASN TYR GLN TYR SEQRES 23 A 988 LEU SER ASP LEU THR LYS TYR PRO LYS LYS ALA ILE THR SEQRES 24 A 988 LYS ASP LYS ASN SER ARG MET GLN VAL THR TRP GLU GLY SEQRES 25 A 988 GLU ILE GLU VAL LEU THR GLY GLY GLU HIS THR PHE SER SEQRES 26 A 988 LEU TYR SER SER GLU TYR ALA LYS LEU TYR VAL ASP GLY SEQRES 27 A 988 LYS LEU VAL VAL ASP ARG TRP ARG GLN ASN TRP ASN PRO SEQRES 28 A 988 TRP ASN HIS GLU PHE LYS LEU ASP LEU GLU PRO GLY GLN SEQRES 29 A 988 ARG HIS THR VAL LYS VAL GLU TRP ASP LEU ILE ASP PRO SEQRES 30 A 988 SER TYR ILE ALA LEU LEU HIS ARG ASP PRO LEU PRO ALA SEQRES 31 A 988 ALA GLU ALA LYS ASP LEU SER LEU TRP SER GLU ALA GLY SEQRES 32 A 988 GLN MET ILE ASP TYR TYR PHE VAL SER ALA ASP SER TYR SEQRES 33 A 988 ASP GLN ALA VAL ALA GLY TYR ARG ALA LEU THR GLY LYS SEQRES 34 A 988 SER THR MET LEU PRO LYS TRP ALA TYR GLY PHE TRP GLN SEQRES 35 A 988 SER ARG GLU ARG TYR LYS SER GLN ASP GLU LEU VAL GLY SEQRES 36 A 988 ALA VAL ALA GLU TYR ARG LYS ARG LYS LEU SER LEU ASP SEQRES 37 A 988 ASN ILE VAL LEU ASP TRP SER TYR TRP PRO GLU ASN ALA SEQRES 38 A 988 TRP GLY SER HIS ASP PHE ASP PRO GLN HIS PHE PRO ASP SEQRES 39 A 988 PRO ASP GLY MET VAL LYS ALA VAL HIS ASP MET HIS ALA SEQRES 40 A 988 GLN ILE MET ILE SER ILE TRP PRO LYS PHE TYR PRO THR SEQRES 41 A 988 THR ALA ASN TYR LYS GLU LEU ASP ALA ALA GLY PHE MET SEQRES 42 A 988 PHE LYS ARG ASN VAL GLU VAL GLY GLU LEU ASP TRP ILE SEQRES 43 A 988 GLY LYS GLY TYR LYS ASN SER PHE TYR ASP PRO TYR SER SEQRES 44 A 988 GLU LYS ALA GLN ALA ILE TYR TRP ARG GLN ILE ASN GLU SEQRES 45 A 988 LYS LEU ASN SER LYS GLY PHE ASP ALA TRP TRP MET ASP SEQRES 46 A 988 ALA ASP GLU PRO ASP VAL HIS SER ASN LEU ASP ILE ALA SEQRES 47 A 988 GLU ARG LYS ALA ARG THR THR PRO ASN ALA LEU GLY SER SEQRES 48 A 988 SER THR GLU TYR PHE ASN SER TYR PRO LEU PRO HIS THR SEQRES 49 A 988 HIS GLY VAL TYR VAL GLY ASP ARG ALA ALA ASP ASP LYS SEQRES 50 A 988 ARG VAL PHE ILE LEU SER ARG LYS GLY TYR ALA GLY THR SEQRES 51 A 988 GLN ARG ASN ALA VAL ALA VAL TRP SER GLY ASP ILE VAL SEQRES 52 A 988 SER ARG TRP ASP ASP MET ARG ASP GLN ILE SER GLY GLY SEQRES 53 A 988 VAL ASN MET ALA LEU SER GLY LEU PRO ASN TRP THR PHE SEQRES 54 A 988 ASP ILE GLY GLY PHE ALA VAL GLU LYS ARG TYR GLU ASP SEQRES 55 A 988 GLN ASP PRO ALA HIS LEU PRO GLU TRP ARG GLU LEU ASN SEQRES 56 A 988 THR ARG TRP PHE GLN PHE GLY ALA PHE VAL PRO ILE PHE SEQRES 57 A 988 ARG SER HIS GLY GLN PHE PRO TYR ARG GLU ILE TRP ASN SEQRES 58 A 988 ILE ALA PRO GLU GLY THR PRO PHE TYR GLU SER MET ALA SEQRES 59 A 988 TYR TYR ASN ARG LEU ARG SER ALA LEU LEU PRO TYR ILE SEQRES 60 A 988 TYR SER LEU ALA GLY ASP THR TYR GLN ARG ASP GLY VAL SEQRES 61 A 988 ILE MET ARG GLY MET MET MET ASP PHE PRO ASN ASP PRO SEQRES 62 A 988 LYS VAL ARG ASP ILE ASN ASP GLN TYR LEU PHE GLY PRO SEQRES 63 A 988 ALA PHE LEU VAL ALA PRO VAL THR ARG PHE GLY ALA THR SEQRES 64 A 988 SER ARG GLN VAL TYR LEU PRO ALA GLY SER SER TRP LEU SEQRES 65 A 988 GLU PHE ALA THR GLY LYS ARG TYR GLU GLY GLY GLN SER SEQRES 66 A 988 ILE GLU ALA ALA ALA PRO ILE GLU ARG MET PRO LEU PHE SEQRES 67 A 988 VAL ARG ALA GLY SER ILE VAL PRO THR GLY PRO VAL GLN SEQRES 68 A 988 GLU TYR VAL ASP GLN VAL ALA ASP ALA PRO LEU THR VAL SEQRES 69 A 988 VAL VAL TYR THR GLY ALA ASP GLY GLN PHE SER LEU TYR SEQRES 70 A 988 GLU ASP ASP GLY LYS GLY TYR GLY TYR GLU LYS GLY GLU SEQRES 71 A 988 PHE SER ARG ILE PRO LEU VAL TRP ASN GLN ALA LYS GLY SEQRES 72 A 988 GLU LEU SER ILE GLY LYS ARG GLU GLY SER TRP THR GLY SEQRES 73 A 988 MET GLN ALA LYS ARG THR ILE ASN VAL ARG PHE VAL ASP SEQRES 74 A 988 GLY PRO ARG ASP ASP ALA GLY ALA LEU ALA PRO LYS THR SEQRES 75 A 988 ASP ALA SER ILE GLN TYR ASP GLY LYS PRO VAL SER VAL SEQRES 76 A 988 LEU GLN ARG LYS ILE ALA SER GLY LYS ALA ARG ARG ARG HET K A1001 1 HET XYS A1002 10 HET GOL A1003 6 HETNAM K POTASSIUM ION HETNAM XYS ALPHA-D-XYLOPYRANOSE HETNAM GOL GLYCEROL HETSYN XYS ALPHA-D-XYLOSE; D-XYLOSE; XYLOSE; XYLOPYRANOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 K K 1+ FORMUL 3 XYS C5 H10 O5 FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *794(H2 O) HELIX 1 AA1 TYR A 265 TYR A 272 5 8 HELIX 2 AA2 PRO A 273 ILE A 277 5 5 HELIX 3 AA3 SER A 394 GLY A 407 1 14 HELIX 4 AA4 PRO A 413 TYR A 417 5 5 HELIX 5 AA5 SER A 428 ARG A 442 1 15 HELIX 6 AA6 ASP A 473 MET A 484 1 12 HELIX 7 AA7 THR A 500 ALA A 509 1 10 HELIX 8 AA8 LYS A 514 VAL A 519 1 6 HELIX 9 AA9 SER A 538 LEU A 553 1 16 HELIX 10 AB1 ASN A 554 GLY A 557 5 4 HELIX 11 AB2 ASP A 575 ARG A 582 1 8 HELIX 12 AB3 TYR A 598 ASP A 614 1 17 HELIX 13 AB4 GLY A 628 ASN A 632 5 5 HELIX 14 AB5 ARG A 644 GLY A 662 1 19 HELIX 15 AB6 GLU A 676 ASP A 681 1 6 HELIX 16 AB7 ASP A 683 ALA A 685 5 3 HELIX 17 AB8 HIS A 686 ALA A 702 1 17 HELIX 18 AB9 GLU A 717 ALA A 722 1 6 HELIX 19 AC1 THR A 726 LEU A 742 1 17 HELIX 20 AC2 LEU A 742 ARG A 756 1 15 HELIX 21 AC3 GLY A 763 PHE A 768 1 6 HELIX 22 AC4 ASP A 771 ARG A 775 5 5 HELIX 23 AC5 TYR A 883 GLY A 888 5 6 SHEET 1 AA1 8 ARG A 40 LYS A 41 0 SHEET 2 AA1 8 GLY A 45 VAL A 48 -1 O THR A 47 N ARG A 40 SHEET 3 AA1 8 VAL A 58 ASP A 64 -1 O LEU A 60 N VAL A 46 SHEET 4 AA1 8 ILE A 67 ALA A 72 -1 O ARG A 69 N GLN A 61 SHEET 5 AA1 8 ILE A 385 SER A 391 -1 O PHE A 389 N ILE A 68 SHEET 6 AA1 8 TYR A 205 TRP A 209 -1 N GLY A 206 O VAL A 390 SHEET 7 AA1 8 TYR A 198 SER A 201 -1 N LEU A 199 O LEU A 207 SHEET 8 AA1 8 LEU A 167 GLY A 169 -1 N TYR A 168 O VAL A 200 SHEET 1 AA2 9 GLN A 96 GLU A 99 0 SHEET 2 AA2 9 SER A 103 LYS A 107 -1 O GLN A 105 N ALA A 98 SHEET 3 AA2 9 VAL A 111 SER A 116 -1 O ILE A 115 N VAL A 104 SHEET 4 AA2 9 VAL A 122 ASP A 126 -1 O SER A 123 N SER A 114 SHEET 5 AA2 9 PRO A 131 VAL A 147 -1 O LEU A 133 N PHE A 124 SHEET 6 AA2 9 LYS A 150 PHE A 159 -1 O TYR A 152 N LEU A 145 SHEET 7 AA2 9 LEU A 375 GLY A 382 -1 O LEU A 375 N PHE A 159 SHEET 8 AA2 9 THR A 215 LEU A 217 -1 N ARG A 216 O TRP A 378 SHEET 9 AA2 9 VAL A 185 LEU A 187 -1 N LEU A 187 O THR A 215 SHEET 1 AA3 3 GLN A 224 PRO A 225 0 SHEET 2 AA3 3 ILE A 359 ARG A 364 -1 O HIS A 363 N GLN A 224 SHEET 3 AA3 3 VAL A 261 TYR A 263 -1 N TYR A 263 O ILE A 359 SHEET 1 AA4 4 GLN A 224 PRO A 225 0 SHEET 2 AA4 4 ILE A 359 ARG A 364 -1 O HIS A 363 N GLN A 224 SHEET 3 AA4 4 GLY A 299 SER A 307 -1 N THR A 302 O ARG A 364 SHEET 4 AA4 4 GLU A 334 LEU A 339 -1 O LEU A 337 N HIS A 301 SHEET 1 AA5 4 LEU A 230 ASP A 234 0 SHEET 2 AA5 4 MET A 285 VAL A 295 -1 O GLU A 294 N THR A 231 SHEET 3 AA5 4 LEU A 242 ILE A 248 -1 N ALA A 247 O GLN A 286 SHEET 4 AA5 4 LYS A 251 GLU A 258 -1 O ILE A 253 N TYR A 246 SHEET 1 AA6 5 LEU A 230 ASP A 234 0 SHEET 2 AA6 5 MET A 285 VAL A 295 -1 O GLU A 294 N THR A 231 SHEET 3 AA6 5 HIS A 345 LEU A 353 -1 O TRP A 351 N VAL A 287 SHEET 4 AA6 5 GLU A 309 VAL A 315 -1 N TYR A 314 O LYS A 348 SHEET 5 AA6 5 LYS A 318 ARG A 325 -1 O ARG A 325 N GLU A 309 SHEET 1 AA7 8 TRP A 666 THR A 667 0 SHEET 2 AA7 8 VAL A 634 TRP A 637 1 N VAL A 636 O THR A 667 SHEET 3 AA7 8 ILE A 620 SER A 622 1 N ILE A 620 O ALA A 635 SHEET 4 AA7 8 ALA A 560 MET A 563 1 N TRP A 561 O LEU A 621 SHEET 5 AA7 8 GLN A 487 ILE A 492 1 N ILE A 492 O TRP A 562 SHEET 6 AA7 8 ASN A 448 LEU A 451 1 N LEU A 451 O MET A 489 SHEET 7 AA7 8 PHE A 419 GLN A 421 1 N GLN A 421 O ASN A 448 SHEET 8 AA7 8 PHE A 707 SER A 709 1 O SER A 709 N TRP A 420 SHEET 1 AA8 2 LYS A 495 PHE A 496 0 SHEET 2 AA8 2 SER A 532 PHE A 533 -1 O SER A 532 N PHE A 496 SHEET 1 AA9 6 MET A 761 ARG A 762 0 SHEET 2 AA9 6 TYR A 781 PHE A 783 -1 O LEU A 782 N ARG A 762 SHEET 3 AA9 6 PHE A 787 VAL A 789 -1 O VAL A 789 N TYR A 781 SHEET 4 AA9 6 LEU A 836 ARG A 839 -1 O PHE A 837 N LEU A 788 SHEET 5 AA9 6 TRP A 810 GLU A 812 -1 N LEU A 811 O VAL A 838 SHEET 6 AA9 6 ARG A 818 TYR A 819 -1 O TYR A 819 N TRP A 810 SHEET 1 AB1 2 SER A 799 LEU A 804 0 SHEET 2 AB1 2 GLN A 823 ALA A 828 -1 O GLN A 823 N LEU A 804 SHEET 1 AB2 4 SER A 842 THR A 846 0 SHEET 2 AB2 4 LEU A 861 TYR A 866 -1 O THR A 862 N THR A 846 SHEET 3 AB2 4 ARG A 920 VAL A 927 1 O ASN A 923 N VAL A 863 SHEET 4 AB2 4 ALA A 943 TYR A 947 -1 O TYR A 947 N ARG A 920 SHEET 1 AB3 4 GLY A 871 GLU A 877 0 SHEET 2 AB3 4 SER A 891 ASN A 898 -1 O SER A 891 N GLU A 877 SHEET 3 AB3 4 GLU A 903 ILE A 906 -1 O SER A 905 N VAL A 896 SHEET 4 AB3 4 VAL A 952 LEU A 955 -1 O VAL A 952 N ILE A 906 LINK O ASP A 610 K K A1001 1555 1555 2.76 LINK OD1 ASP A 610 K K A1001 1555 1555 2.75 LINK O ASP A 614 K K A1001 1555 1555 2.99 LINK OD1 ASP A 614 K K A1001 1555 1555 2.88 LINK O LYS A 616 K K A1001 1555 1555 2.65 LINK K K A1001 O HOH A1333 1555 1555 3.00 CISPEP 1 ASP A 355 PRO A 356 0 -7.12 CISPEP 2 GLU A 424 ARG A 425 0 2.42 CISPEP 3 GLU A 567 PRO A 568 0 -4.15 CISPEP 4 THR A 584 PRO A 585 0 -4.20 CISPEP 5 PHE A 713 PRO A 714 0 10.09 CRYST1 117.493 146.632 63.044 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008511 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006820 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015862 0.00000