HEADER TRANSFERASE 03-DEC-20 7KX8 TITLE CRYSTAL STRUCTURE OF DCLK1-CTER IN COMPLEX WITH FMF-03-055-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE DCLK1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 3A,DOUBLECORTIN-LIKE COMPND 5 AND CAM KINASE-LIKE 1,DOUBLECORTIN-LIKE KINASE 1; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DCLK1, DCAMKL1, DCDC3A, KIAA0369; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PCOLD KEYWDS KINASE, DOUBLECORTIN-LIKE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR O.PATEL,I.LUCET REVDAT 3 18-OCT-23 7KX8 1 REMARK REVDAT 2 27-OCT-21 7KX8 1 JRNL REVDAT 1 22-SEP-21 7KX8 0 JRNL AUTH O.PATEL,M.J.ROY,A.KROPP,J.M.HARDY,W.DAI,I.S.LUCET JRNL TITL STRUCTURAL BASIS FOR SMALL MOLECULE TARGETING OF JRNL TITL 2 DOUBLECORTIN LIKE KINASE 1 WITH DCLK1-IN-1. JRNL REF COMMUN BIOL V. 4 1105 2021 JRNL REFN ESSN 2399-3642 JRNL PMID 34545159 JRNL DOI 10.1038/S42003-021-02631-Y REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.68 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 10693 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.240 REMARK 3 FREE R VALUE TEST SET COUNT : 560 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 71.6760 - 4.9210 0.99 2580 143 0.1923 0.2517 REMARK 3 2 4.9210 - 3.9060 0.99 2521 132 0.1653 0.2349 REMARK 3 3 3.9060 - 3.4123 1.00 2510 149 0.1965 0.2412 REMARK 3 4 3.4123 - 3.1003 1.00 2522 136 0.2380 0.2929 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4074 REMARK 3 ANGLE : 0.658 5548 REMARK 3 CHIRALITY : 0.047 656 REMARK 3 PLANARITY : 0.006 736 REMARK 3 DIHEDRAL : 5.725 2444 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 382 THROUGH 387 OR REMARK 3 (RESID 388 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 389 REMARK 3 THROUGH 393 OR (RESID 394 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 395 THROUGH 397 OR (RESID 401 REMARK 3 THROUGH 402 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 403 THROUGH 422 OR (RESID 423 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 424 THROUGH 589 OR (RESID 595 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 596 THROUGH 647)) REMARK 3 SELECTION : (CHAIN B AND (RESID 382 THROUGH 427 OR REMARK 3 (RESID 430 THROUGH 432 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 433 OR (RESID 434 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 435 THROUGH 443 OR (RESID 444 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 445 THROUGH 468 REMARK 3 OR (RESID 469 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 470 THROUGH 474 OR (RESID 475 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 483 THROUGH 519 OR (RESID 520 REMARK 3 THROUGH 521 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR (RESID REMARK 3 527 AND (NAME N OR NAME CA OR NAME C OR REMARK 3 NAME O OR NAME CB )) OR RESID 528 THROUGH REMARK 3 540 OR (RESID 541 AND (NAME N OR NAME CA REMARK 3 OR NAME C OR NAME O OR NAME CB )) OR REMARK 3 RESID 542 THROUGH 647)) REMARK 3 ATOM PAIRS NUMBER : 2132 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7KX8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1000253320. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.8 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10702 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 71.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.23600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.92700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5JZJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG400, AMMONIUM SULFPHATE, HEPES, PH REMARK 280 7.25, EVAPORATION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.21500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 370 REMARK 465 SER A 371 REMARK 465 GLY A 372 REMARK 465 GLU A 373 REMARK 465 GLU A 374 REMARK 465 VAL A 375 REMARK 465 SER A 376 REMARK 465 GLU A 377 REMARK 465 GLU A 378 REMARK 465 GLY A 379 REMARK 465 PHE A 380 REMARK 465 GLN A 381 REMARK 465 GLY A 428 REMARK 465 LYS A 429 REMARK 465 ALA A 476 REMARK 465 ILE A 477 REMARK 465 THR A 478 REMARK 465 SER A 479 REMARK 465 THR A 480 REMARK 465 ASN A 481 REMARK 465 LYS A 482 REMARK 465 HIS A 522 REMARK 465 GLN A 523 REMARK 465 ASP A 524 REMARK 465 GLY A 525 REMARK 465 SER A 526 REMARK 465 GLY A 591 REMARK 465 ASP A 592 REMARK 465 ASP A 593 REMARK 465 ASP A 650 REMARK 465 ASP A 651 REMARK 465 GLY A 652 REMARK 465 LEU A 653 REMARK 465 PRO A 654 REMARK 465 GLU A 655 REMARK 465 ASN A 656 REMARK 465 GLU A 657 REMARK 465 ASN A 671 REMARK 465 THR A 672 REMARK 465 GLY A 673 REMARK 465 PRO A 674 REMARK 465 LYS A 675 REMARK 465 PRO A 676 REMARK 465 ASN A 677 REMARK 465 SER A 678 REMARK 465 THR A 679 REMARK 465 ALA A 680 REMARK 465 ALA A 681 REMARK 465 GLY A 682 REMARK 465 VAL A 683 REMARK 465 SER A 684 REMARK 465 VAL A 685 REMARK 465 ILE A 686 REMARK 465 ALA A 687 REMARK 465 GLY B 370 REMARK 465 SER B 371 REMARK 465 GLY B 372 REMARK 465 GLU B 373 REMARK 465 GLU B 374 REMARK 465 VAL B 375 REMARK 465 SER B 376 REMARK 465 GLU B 377 REMARK 465 GLU B 378 REMARK 465 GLY B 379 REMARK 465 ASP B 398 REMARK 465 GLY B 399 REMARK 465 ASN B 400 REMARK 465 ILE B 477 REMARK 465 THR B 478 REMARK 465 SER B 479 REMARK 465 THR B 480 REMARK 465 ASN B 481 REMARK 465 GLN B 523 REMARK 465 ASP B 524 REMARK 465 GLY B 525 REMARK 465 SER B 526 REMARK 465 SER B 590 REMARK 465 GLY B 591 REMARK 465 ASP B 592 REMARK 465 ASP B 593 REMARK 465 GLN B 594 REMARK 465 ASN B 648 REMARK 465 ASP B 649 REMARK 465 ASP B 650 REMARK 465 GLY B 651 REMARK 465 LEU B 652 REMARK 465 PRO B 653 REMARK 465 GLU B 654 REMARK 465 ASN B 655 REMARK 465 GLU B 656 REMARK 465 HIS B 657 REMARK 465 GLN B 658 REMARK 465 LEU B 659 REMARK 465 SER B 660 REMARK 465 VAL B 661 REMARK 465 ALA B 662 REMARK 465 GLY B 663 REMARK 465 LYS B 664 REMARK 465 ILE B 665 REMARK 465 LYS B 666 REMARK 465 LYS B 667 REMARK 465 HIS B 668 REMARK 465 PHE B 669 REMARK 465 ASN B 670 REMARK 465 THR B 671 REMARK 465 GLY B 672 REMARK 465 PRO B 673 REMARK 465 LYS B 674 REMARK 465 PRO B 675 REMARK 465 ASN B 676 REMARK 465 SER B 677 REMARK 465 THR B 678 REMARK 465 ALA B 679 REMARK 465 ALA B 680 REMARK 465 GLY B 681 REMARK 465 VAL B 682 REMARK 465 SER B 683 REMARK 465 VAL B 684 REMARK 465 ILE B 685 REMARK 465 ALA B 686 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 398 CG OD1 OD2 REMARK 470 ASN A 400 CG OD1 ND2 REMARK 470 LYS A 422 CG CD CE NZ REMARK 470 LYS A 425 CG CD CE NZ REMARK 470 ARG A 427 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 430 CG CD OE1 OE2 REMARK 470 HIS A 431 CG ND1 CD2 CE1 NE2 REMARK 470 MET A 432 CG SD CE REMARK 470 GLN A 434 CG CD OE1 NE2 REMARK 470 LYS A 444 CG CD CE NZ REMARK 470 MET A 455 CG SD CE REMARK 470 LYS A 469 CG CD CE NZ REMARK 470 ASP A 475 CG OD1 OD2 REMARK 470 ARG A 486 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 520 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 521 CG CD OE1 OE2 REMARK 470 LYS A 527 CG CD CE NZ REMARK 470 ASP A 541 CG OD1 OD2 REMARK 470 GLN A 594 CG CD OE1 NE2 REMARK 470 HIS A 658 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 659 CG CD OE1 NE2 REMARK 470 LYS A 667 CG CD CE NZ REMARK 470 LYS A 668 CG CD CE NZ REMARK 470 PHE B 380 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN B 381 CG CD OE1 NE2 REMARK 470 GLU B 388 CG CD OE1 OE2 REMARK 470 ARG B 394 CG CD NE CZ NH1 NH2 REMARK 470 PHE B 401 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 422 CG CD CE NZ REMARK 470 LYS B 423 CG CD CE NZ REMARK 470 LYS B 425 CG CD CE NZ REMARK 470 ARG B 427 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 430 CG CD OE1 OE2 REMARK 470 MET B 455 CG SD CE REMARK 470 LYS B 482 CG CD CE NZ REMARK 470 ARG B 486 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 521 CG CD OE1 OE2 REMARK 470 GLU B 595 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 533 82.66 56.26 REMARK 500 LEU A 628 59.17 -104.71 REMARK 500 LYS A 665 -26.42 -167.96 REMARK 500 ARG B 427 56.78 -97.05 REMARK 500 ASP B 533 82.57 56.23 REMARK 500 LEU B 628 58.37 -102.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue X8J A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue X8J B 701 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7KX6 RELATED DB: PDB DBREF 7KX8 A 372 687 UNP O15075 DCLK1_HUMAN 372 686 DBREF 7KX8 B 372 686 UNP O15075 DCLK1_HUMAN 372 686 SEQADV 7KX8 GLY A 370 UNP O15075 EXPRESSION TAG SEQADV 7KX8 SER A 371 UNP O15075 EXPRESSION TAG SEQADV 7KX8 GLY B 370 UNP O15075 EXPRESSION TAG SEQADV 7KX8 SER B 371 UNP O15075 EXPRESSION TAG SEQRES 1 A 317 GLY SER GLY GLU GLU VAL SER GLU GLU GLY PHE GLN ILE SEQRES 2 A 317 PRO ALA THR ILE THR GLU ARG TYR LYS VAL GLY ARG THR SEQRES 3 A 317 ILE GLY ASP GLY ASN PHE ALA VAL VAL LYS GLU CYS VAL SEQRES 4 A 317 GLU ARG SER THR ALA ARG GLU TYR ALA LEU LYS ILE ILE SEQRES 5 A 317 LYS LYS SER LYS CYS ARG GLY LYS GLU HIS MET ILE GLN SEQRES 6 A 317 ASN GLU VAL SER ILE LEU ARG ARG VAL LYS HIS PRO ASN SEQRES 7 A 317 ILE VAL LEU LEU ILE GLU GLU MET ASP VAL PRO THR GLU SEQRES 8 A 317 LEU TYR LEU VAL MET GLU LEU VAL LYS GLY GLY ASP LEU SEQRES 9 A 317 PHE ASP ALA ILE THR SER THR ASN LYS TYR THR GLU ARG SEQRES 10 A 317 ASP ALA SER GLY MET LEU TYR ASN LEU ALA SER ALA ILE SEQRES 11 A 317 LYS TYR LEU HIS SER LEU ASN ILE VAL HIS ARG ASP ILE SEQRES 12 A 317 LYS PRO GLU ASN LEU LEU VAL TYR GLU HIS GLN ASP GLY SEQRES 13 A 317 SER LYS SER LEU LYS LEU GLY ASP PHE GLY LEU ALA THR SEQRES 14 A 317 ILE VAL ASP GLY PRO LEU TYR THR VAL CYS GLY THR PRO SEQRES 15 A 317 THR TYR VAL ALA PRO GLU ILE ILE ALA GLU THR GLY TYR SEQRES 16 A 317 GLY LEU LYS VAL ASP ILE TRP ALA ALA GLY VAL ILE THR SEQRES 17 A 317 TYR ILE LEU LEU CYS GLY PHE PRO PRO PHE ARG GLY SER SEQRES 18 A 317 GLY ASP ASP GLN GLU VAL LEU PHE ASP GLN ILE LEU MET SEQRES 19 A 317 GLY GLN VAL ASP PHE PRO SER PRO TYR TRP ASP ASN VAL SEQRES 20 A 317 SER ASP SER ALA LYS GLU LEU ILE THR MET MET LEU LEU SEQRES 21 A 317 VAL ASP VAL ASP GLN ARG PHE SER ALA VAL GLN VAL LEU SEQRES 22 A 317 GLU HIS PRO TRP VAL ASN ASP ASP GLY LEU PRO GLU ASN SEQRES 23 A 317 GLU HIS GLN LEU SER VAL ALA GLY LYS ILE LYS LYS HIS SEQRES 24 A 317 PHE ASN THR GLY PRO LYS PRO ASN SER THR ALA ALA GLY SEQRES 25 A 317 VAL SER VAL ILE ALA SEQRES 1 B 317 GLY SER GLY GLU GLU VAL SER GLU GLU GLY PHE GLN ILE SEQRES 2 B 317 PRO ALA THR ILE THR GLU ARG TYR LYS VAL GLY ARG THR SEQRES 3 B 317 ILE GLY ASP GLY ASN PHE ALA VAL VAL LYS GLU CYS VAL SEQRES 4 B 317 GLU ARG SER THR ALA ARG GLU TYR ALA LEU LYS ILE ILE SEQRES 5 B 317 LYS LYS SER LYS CYS ARG GLY LYS GLU HIS MET ILE GLN SEQRES 6 B 317 ASN GLU VAL SER ILE LEU ARG ARG VAL LYS HIS PRO ASN SEQRES 7 B 317 ILE VAL LEU LEU ILE GLU GLU MET ASP VAL PRO THR GLU SEQRES 8 B 317 LEU TYR LEU VAL MET GLU LEU VAL LYS GLY GLY ASP LEU SEQRES 9 B 317 PHE ASP ALA ILE THR SER THR ASN LYS TYR THR GLU ARG SEQRES 10 B 317 ASP ALA SER GLY MET LEU TYR ASN LEU ALA SER ALA ILE SEQRES 11 B 317 LYS TYR LEU HIS SER LEU ASN ILE VAL HIS ARG ASP ILE SEQRES 12 B 317 LYS PRO GLU ASN LEU LEU VAL TYR GLU HIS GLN ASP GLY SEQRES 13 B 317 SER LYS SER LEU LYS LEU GLY ASP PHE GLY LEU ALA THR SEQRES 14 B 317 ILE VAL ASP GLY PRO LEU TYR THR VAL CYS GLY THR PRO SEQRES 15 B 317 THR TYR VAL ALA PRO GLU ILE ILE ALA GLU THR GLY TYR SEQRES 16 B 317 GLY LEU LYS VAL ASP ILE TRP ALA ALA GLY VAL ILE THR SEQRES 17 B 317 TYR ILE LEU LEU CYS GLY PHE PRO PRO PHE ARG GLY SER SEQRES 18 B 317 GLY ASP ASP GLN GLU VAL LEU PHE ASP GLN ILE LEU MET SEQRES 19 B 317 GLY GLN VAL ASP PHE PRO SER PRO TYR TRP ASP ASN VAL SEQRES 20 B 317 SER ASP SER ALA LYS GLU LEU ILE THR MET MET LEU LEU SEQRES 21 B 317 VAL ASP VAL ASP GLN ARG PHE SER ALA VAL GLN VAL LEU SEQRES 22 B 317 GLU HIS PRO TRP VAL ASN ASP ASP GLY LEU PRO GLU ASN SEQRES 23 B 317 GLU HIS GLN LEU SER VAL ALA GLY LYS ILE LYS LYS HIS SEQRES 24 B 317 PHE ASN THR GLY PRO LYS PRO ASN SER THR ALA ALA GLY SEQRES 25 B 317 VAL SER VAL ILE ALA HET X8J A 701 35 HET X8J B 701 35 HETNAM X8J 5-ETHYL-2-{[2-METHOXY-4-(4-METHYLPIPERAZIN-1-YL) HETNAM 2 X8J PHENYL]AMINO}-11-METHYL-5,11-DIHYDRO-6H-PYRIMIDO[4,5- HETNAM 3 X8J B][1,4]BENZODIAZEPIN-6-ONE FORMUL 3 X8J 2(C26 H31 N7 O2) HELIX 1 AA1 PRO A 383 GLU A 388 1 6 HELIX 2 AA2 HIS A 431 ARG A 441 1 11 HELIX 3 AA3 THR A 484 LEU A 505 1 22 HELIX 4 AA4 LYS A 513 GLU A 515 5 3 HELIX 5 AA5 THR A 550 VAL A 554 5 5 HELIX 6 AA6 ALA A 555 GLU A 561 1 7 HELIX 7 AA7 LYS A 567 GLY A 583 1 17 HELIX 8 AA8 GLU A 595 GLY A 604 1 10 HELIX 9 AA9 SER A 617 LEU A 628 1 12 HELIX 10 AB1 SER A 637 GLU A 643 1 7 HELIX 11 AB2 VAL A 662 PHE A 670 1 9 HELIX 12 AB3 PRO B 383 GLU B 388 1 6 HELIX 13 AB4 GLN B 434 ARG B 441 1 8 HELIX 14 AB5 THR B 484 LEU B 505 1 22 HELIX 15 AB6 LYS B 513 GLU B 515 5 3 HELIX 16 AB7 ALA B 555 GLU B 561 1 7 HELIX 17 AB8 LYS B 567 GLY B 583 1 17 HELIX 18 AB9 VAL B 596 GLY B 604 1 9 HELIX 19 AC1 SER B 617 LEU B 628 1 12 HELIX 20 AC2 SER B 637 GLU B 643 1 7 SHEET 1 AA1 5 TYR A 390 ASP A 398 0 SHEET 2 AA1 5 VAL A 403 GLU A 409 -1 O VAL A 404 N GLY A 397 SHEET 3 AA1 5 ARG A 414 LYS A 422 -1 O ILE A 420 N VAL A 403 SHEET 4 AA1 5 GLU A 460 MET A 465 -1 O LEU A 463 N LYS A 419 SHEET 5 AA1 5 LEU A 451 ASP A 456 -1 N GLU A 453 O VAL A 464 SHEET 1 AA2 2 CYS A 426 ARG A 427 0 SHEET 2 AA2 2 VAL B 547 CYS B 548 -1 O VAL B 547 N ARG A 427 SHEET 1 AA3 2 ILE A 507 VAL A 508 0 SHEET 2 AA3 2 THR A 538 ILE A 539 -1 O THR A 538 N VAL A 508 SHEET 1 AA4 2 LEU A 517 TYR A 520 0 SHEET 2 AA4 2 SER A 528 LEU A 531 -1 O LYS A 530 N LEU A 518 SHEET 1 AA5 5 TYR B 390 THR B 395 0 SHEET 2 AA5 5 ALA B 402 GLU B 409 -1 O GLU B 406 N GLY B 393 SHEET 3 AA5 5 ARG B 414 LYS B 422 -1 O ILE B 420 N VAL B 403 SHEET 4 AA5 5 GLU B 460 GLU B 466 -1 O LEU B 463 N LYS B 419 SHEET 5 AA5 5 LEU B 451 ASP B 456 -1 N GLU B 453 O VAL B 464 SHEET 1 AA6 2 ILE B 507 VAL B 508 0 SHEET 2 AA6 2 THR B 538 ILE B 539 -1 O THR B 538 N VAL B 508 SHEET 1 AA7 2 LEU B 517 TYR B 520 0 SHEET 2 AA7 2 SER B 528 LEU B 531 -1 O SER B 528 N TYR B 520 CISPEP 1 SER A 610 PRO A 611 0 5.52 CISPEP 2 SER B 610 PRO B 611 0 4.99 SITE 1 AC1 9 ILE A 396 VAL A 404 ALA A 417 MET A 465 SITE 2 AC1 9 GLU A 466 VAL A 468 LYS A 469 GLU A 515 SITE 3 AC1 9 LEU A 518 SITE 1 AC2 12 ILE B 396 VAL B 404 GLU B 406 ALA B 417 SITE 2 AC2 12 MET B 465 GLU B 466 LEU B 467 VAL B 468 SITE 3 AC2 12 LYS B 469 GLY B 471 GLU B 515 LEU B 518 CRYST1 65.920 62.430 72.080 90.00 96.07 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015170 0.000000 0.001613 0.00000 SCALE2 0.000000 0.016018 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013952 0.00000