HEADER CHAPERONE 10-DEC-20 7KZU TITLE QUASI-INTERMEDIATE STATE (Q) OF A TRUNCATED HSP70 DNAK FUSED WITH A TITLE 2 SUBSTRATE PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHAPERONE PROTEIN DNAK FUSED WITH SUBSTRATE PEPTIDE, COMPND 3 CHAPERONE PROTEIN DNAK FUSED WITH SUBSTRATE PEPTIDE; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: TRUNCATED (2-540),TRUNCATED (2-540); COMPND 6 SYNONYM: HSP70,HEAT SHOCK 70 KDA PROTEIN,HEAT SHOCK PROTEIN 70; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12), ESCHERICHIA COLI SOURCE 3 K-12; SOURCE 4 ORGANISM_TAXID: 83333; SOURCE 5 STRAIN: K12, K-12; SOURCE 6 GENE: DNAK, FAZ83_07380; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS MOLECULAR CHAPERONE, HSP70, PROTEIN FOLDING, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR W.WANG,W.A.HENDRICKSON REVDAT 2 18-OCT-23 7KZU 1 REMARK REVDAT 1 12-MAY-21 7KZU 0 JRNL AUTH W.WANG,W.A.HENDRICKSON JRNL TITL INTERMEDIATES IN ALLOSTERIC EQUILIBRIA OF DNAK-ATP JRNL TITL 2 INTERACTIONS WITH SUBSTRATE PEPTIDES JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 77 606 2021 JRNL REFN ESSN 1399-0047 JRNL DOI 10.1107/S2059798321002436 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 41707 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.790 REMARK 3 FREE R VALUE TEST SET COUNT : 1996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.5100 - 5.1800 1.00 3084 155 0.1825 0.2184 REMARK 3 2 5.1800 - 4.1100 1.00 2916 147 0.1653 0.1927 REMARK 3 3 4.1100 - 3.5900 1.00 2866 144 0.1792 0.2146 REMARK 3 4 3.5900 - 3.2600 1.00 2866 144 0.2164 0.2584 REMARK 3 5 3.2600 - 3.0300 1.00 2832 142 0.2279 0.2599 REMARK 3 6 3.0300 - 2.8500 1.00 2827 143 0.2298 0.3025 REMARK 3 7 2.8500 - 2.7100 1.00 2813 141 0.2421 0.2782 REMARK 3 8 2.7100 - 2.5900 1.00 2806 141 0.2382 0.2553 REMARK 3 9 2.5900 - 2.4900 1.00 2812 141 0.2438 0.2775 REMARK 3 10 2.4900 - 2.4000 1.00 2794 141 0.2574 0.3119 REMARK 3 11 2.4000 - 2.3300 1.00 2795 140 0.2645 0.2937 REMARK 3 12 2.3300 - 2.2600 1.00 2783 140 0.2918 0.3502 REMARK 3 13 2.2600 - 2.2000 1.00 2777 140 0.3057 0.3250 REMARK 3 14 2.2000 - 2.1500 0.97 2740 137 0.3156 0.3392 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.590 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.8664 83.9711 26.7774 REMARK 3 T TENSOR REMARK 3 T11: 0.5588 T22: 0.5279 REMARK 3 T33: 0.4681 T12: 0.1387 REMARK 3 T13: -0.0822 T23: -0.0266 REMARK 3 L TENSOR REMARK 3 L11: 1.2230 L22: 2.3699 REMARK 3 L33: 0.9001 L12: -0.3378 REMARK 3 L13: 0.0825 L23: 0.2522 REMARK 3 S TENSOR REMARK 3 S11: 0.1980 S12: 0.3534 S13: -0.2082 REMARK 3 S21: -0.3717 S22: -0.2515 S23: 0.1344 REMARK 3 S31: 0.2133 S32: 0.2449 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 132 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.5710 93.6080 37.0141 REMARK 3 T TENSOR REMARK 3 T11: 0.4558 T22: 0.5420 REMARK 3 T33: 0.4514 T12: 0.0407 REMARK 3 T13: -0.0418 T23: 0.0724 REMARK 3 L TENSOR REMARK 3 L11: 1.1426 L22: 1.0892 REMARK 3 L33: 1.4374 L12: -0.6541 REMARK 3 L13: 0.3329 L23: -0.0593 REMARK 3 S TENSOR REMARK 3 S11: 0.0474 S12: 0.1248 S13: -0.0650 REMARK 3 S21: 0.0218 S22: -0.1353 S23: -0.2822 REMARK 3 S31: 0.0210 S32: 0.4850 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 229 THROUGH 369 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9219 89.7855 45.9026 REMARK 3 T TENSOR REMARK 3 T11: 0.4622 T22: 0.4028 REMARK 3 T33: 0.4447 T12: 0.0062 REMARK 3 T13: -0.0138 T23: 0.0440 REMARK 3 L TENSOR REMARK 3 L11: 1.9554 L22: 1.0913 REMARK 3 L33: 0.8302 L12: 0.6592 REMARK 3 L13: 0.9947 L23: 0.4745 REMARK 3 S TENSOR REMARK 3 S11: 0.0945 S12: -0.1809 S13: -0.0879 REMARK 3 S21: 0.2187 S22: -0.1061 S23: 0.1491 REMARK 3 S31: 0.0270 S32: -0.0637 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 370 THROUGH 550 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.1600 75.8833 38.2260 REMARK 3 T TENSOR REMARK 3 T11: 0.5779 T22: 0.6619 REMARK 3 T33: 0.6542 T12: 0.1475 REMARK 3 T13: -0.0256 T23: 0.0525 REMARK 3 L TENSOR REMARK 3 L11: 0.7858 L22: 1.6625 REMARK 3 L33: -0.1480 L12: -0.6939 REMARK 3 L13: 0.0423 L23: 0.2364 REMARK 3 S TENSOR REMARK 3 S11: -0.0312 S12: 0.1351 S13: -0.1898 REMARK 3 S21: 0.1359 S22: -0.0078 S23: -0.2536 REMARK 3 S31: 0.0494 S32: 0.2620 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7KZU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1000253466. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.32 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41813 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 47.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.80 REMARK 200 R MERGE (I) : 0.17800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 19.80 REMARK 200 R MERGE FOR SHELL (I) : 5.00400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4JNE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NACL, 0.1 M HEPES PH 7.5, 1.6 M REMARK 280 (NH4)2SO4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 61.10600 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 61.10600 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 61.10600 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 61.10600 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 61.10600 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 61.10600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 734 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 763 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 810 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 856 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 527 REMARK 465 LYS A 528 REMARK 465 PHE A 529 REMARK 465 GLU A 530 REMARK 465 GLU A 531 REMARK 465 LEU A 532 REMARK 465 VAL A 533 REMARK 465 GLN A 534 REMARK 465 THR A 535 REMARK 465 ARG A 536 REMARK 465 ASN A 537 REMARK 465 GLN A 538 REMARK 465 GLY A 539 REMARK 465 ASP A 540 REMARK 465 THR A 541 REMARK 465 THR A 542 REMARK 465 GLY A 543 REMARK 465 SER A 544 REMARK 465 THR A 551 REMARK 465 GLY A 552 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 185 OG1 CG2 REMARK 470 ASN A 432 CG OD1 ND2 REMARK 470 LYS A 446 CG CD CE NZ REMARK 470 ARG A 467 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 524 CG CD OE1 OE2 REMARK 470 ASP A 526 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 61 53.84 -145.39 REMARK 500 ASP A 364 48.87 -92.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 601 O3G REMARK 620 2 ATP A 601 O1B 79.4 REMARK 620 3 HOH A 721 O 87.8 167.1 REMARK 620 4 HOH A 740 O 93.0 94.3 88.5 REMARK 620 5 HOH A 748 O 172.5 95.1 97.3 92.6 REMARK 620 6 HOH A 776 O 83.3 88.3 88.0 175.0 91.4 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7KZI RELATED DB: PDB DBREF1 7KZU A 2 540 UNP A0A6D2W465_ECOLI DBREF2 7KZU A A0A6D2W465 2 540 DBREF 7KZU A 541 552 PDB 7KZU 7KZU 541 552 SEQADV 7KZU SER A 1 UNP A0A6D2W46 EXPRESSION TAG SEQADV 7KZU ALA A 199 UNP A0A6D2W46 THR 199 ENGINEERED MUTATION SEQRES 1 A 552 SER GLY LYS ILE ILE GLY ILE ASP LEU GLY THR THR ASN SEQRES 2 A 552 SER CYS VAL ALA ILE MET ASP GLY THR THR PRO ARG VAL SEQRES 3 A 552 LEU GLU ASN ALA GLU GLY ASP ARG THR THR PRO SER ILE SEQRES 4 A 552 ILE ALA TYR THR GLN ASP GLY GLU THR LEU VAL GLY GLN SEQRES 5 A 552 PRO ALA LYS ARG GLN ALA VAL THR ASN PRO GLN ASN THR SEQRES 6 A 552 LEU PHE ALA ILE LYS ARG LEU ILE GLY ARG ARG PHE GLN SEQRES 7 A 552 ASP GLU GLU VAL GLN ARG ASP VAL SER ILE MET PRO PHE SEQRES 8 A 552 LYS ILE ILE ALA ALA ASP ASN GLY ASP ALA TRP VAL GLU SEQRES 9 A 552 VAL LYS GLY GLN LYS MET ALA PRO PRO GLN ILE SER ALA SEQRES 10 A 552 GLU VAL LEU LYS LYS MET LYS LYS THR ALA GLU ASP TYR SEQRES 11 A 552 LEU GLY GLU PRO VAL THR GLU ALA VAL ILE THR VAL PRO SEQRES 12 A 552 ALA TYR PHE ASN ASP ALA GLN ARG GLN ALA THR LYS ASP SEQRES 13 A 552 ALA GLY ARG ILE ALA GLY LEU GLU VAL LYS ARG ILE ILE SEQRES 14 A 552 ASN GLU PRO THR ALA ALA ALA LEU ALA TYR GLY LEU ASP SEQRES 15 A 552 LYS GLY THR GLY ASN ARG THR ILE ALA VAL TYR ASP LEU SEQRES 16 A 552 GLY GLY GLY ALA PHE ASP ILE SER ILE ILE GLU ILE ASP SEQRES 17 A 552 GLU VAL ASP GLY GLU LYS THR PHE GLU VAL LEU ALA THR SEQRES 18 A 552 ASN GLY ASP THR HIS LEU GLY GLY GLU ASP PHE ASP SER SEQRES 19 A 552 ARG LEU ILE ASN TYR LEU VAL GLU GLU PHE LYS LYS ASP SEQRES 20 A 552 GLN GLY ILE ASP LEU ARG ASN ASP PRO LEU ALA MET GLN SEQRES 21 A 552 ARG LEU LYS GLU ALA ALA GLU LYS ALA LYS ILE GLU LEU SEQRES 22 A 552 SER SER ALA GLN GLN THR ASP VAL ASN LEU PRO TYR ILE SEQRES 23 A 552 THR ALA ASP ALA THR GLY PRO LYS HIS MET ASN ILE LYS SEQRES 24 A 552 VAL THR ARG ALA LYS LEU GLU SER LEU VAL GLU ASP LEU SEQRES 25 A 552 VAL ASN ARG SER ILE GLU PRO LEU LYS VAL ALA LEU GLN SEQRES 26 A 552 ASP ALA GLY LEU SER VAL SER ASP ILE ASP ASP VAL ILE SEQRES 27 A 552 LEU VAL GLY GLY GLN THR ARG MET PRO MET VAL GLN LYS SEQRES 28 A 552 LYS VAL ALA GLU PHE PHE GLY LYS GLU PRO ARG LYS ASP SEQRES 29 A 552 VAL ASN PRO ASP GLU ALA VAL ALA ILE GLY ALA ALA VAL SEQRES 30 A 552 GLN GLY GLY VAL LEU THR GLY ASP VAL LYS ASP VAL LEU SEQRES 31 A 552 LEU LEU ASP VAL THR PRO LEU SER LEU GLY ILE GLU THR SEQRES 32 A 552 MET GLY GLY VAL MET THR THR LEU ILE ALA LYS ASN THR SEQRES 33 A 552 THR ILE PRO THR LYS HIS SER GLN VAL PHE SER THR ALA SEQRES 34 A 552 GLU ASP ASN GLN SER ALA VAL THR ILE HIS VAL LEU GLN SEQRES 35 A 552 GLY GLU ARG LYS ARG ALA ALA ASP ASN LYS SER LEU GLY SEQRES 36 A 552 GLN PHE ASN LEU ASP GLY ILE ASN PRO ALA PRO ARG GLY SEQRES 37 A 552 MET PRO GLN ILE GLU VAL THR PHE ASP ILE ASP ALA ASP SEQRES 38 A 552 GLY ILE LEU HIS VAL SER ALA LYS ASP LYS ASN SER GLY SEQRES 39 A 552 LYS GLU GLN LYS ILE THR ILE LYS ALA SER SER GLY LEU SEQRES 40 A 552 ASN GLU ASP GLU ILE GLN LYS MET VAL ARG ASP ALA GLU SEQRES 41 A 552 ALA ASN ALA GLU ALA ASP ARG LYS PHE GLU GLU LEU VAL SEQRES 42 A 552 GLN THR ARG ASN GLN GLY ASP THR THR GLY SER GLY ASN SEQRES 43 A 552 ARG LEU LEU LEU THR GLY HET ATP A 601 31 HET MG A 602 1 HET GOL A 603 6 HET GOL A 604 6 HET SO4 A 605 5 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ATP C10 H16 N5 O13 P3 FORMUL 3 MG MG 2+ FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 SO4 O4 S 2- FORMUL 7 HOH *157(H2 O) HELIX 1 AA1 GLY A 51 GLN A 57 1 7 HELIX 2 AA2 ASN A 61 GLN A 63 5 3 HELIX 3 AA3 ILE A 69 LEU A 72 5 4 HELIX 4 AA4 ASP A 79 MET A 89 1 11 HELIX 5 AA5 ALA A 111 GLY A 132 1 22 HELIX 6 AA6 ASN A 147 ALA A 161 1 15 HELIX 7 AA7 GLU A 171 LYS A 183 1 13 HELIX 8 AA8 GLY A 228 GLY A 249 1 22 HELIX 9 AA9 ASP A 251 ASN A 254 5 4 HELIX 10 AB1 ASP A 255 LEU A 273 1 19 HELIX 11 AB2 ARG A 302 GLY A 328 1 27 HELIX 12 AB3 SER A 330 ILE A 334 5 5 HELIX 13 AB4 GLY A 341 ARG A 345 5 5 HELIX 14 AB5 MET A 346 GLY A 358 1 13 HELIX 15 AB6 GLU A 369 GLY A 384 1 16 HELIX 16 AB7 ASN A 508 ASP A 526 1 19 SHEET 1 AA1 3 THR A 23 VAL A 26 0 SHEET 2 AA1 3 ASN A 13 ASP A 20 -1 N ASP A 20 O THR A 23 SHEET 3 AA1 3 THR A 36 PRO A 37 -1 O THR A 36 N SER A 14 SHEET 1 AA2 5 THR A 23 VAL A 26 0 SHEET 2 AA2 5 ASN A 13 ASP A 20 -1 N ASP A 20 O THR A 23 SHEET 3 AA2 5 ILE A 4 ASP A 8 -1 N GLY A 6 O ALA A 17 SHEET 4 AA2 5 GLU A 137 VAL A 142 1 O VAL A 139 N ILE A 7 SHEET 5 AA2 5 GLU A 164 ASN A 170 1 O LYS A 166 N ALA A 138 SHEET 1 AA3 3 THR A 48 VAL A 50 0 SHEET 2 AA3 3 ILE A 39 TYR A 42 -1 N ALA A 41 O LEU A 49 SHEET 3 AA3 3 THR A 65 PHE A 67 -1 O LEU A 66 N ILE A 40 SHEET 1 AA4 3 LYS A 92 ALA A 95 0 SHEET 2 AA4 3 ALA A 101 VAL A 105 -1 O TRP A 102 N ILE A 94 SHEET 3 AA4 3 GLN A 108 MET A 110 -1 O MET A 110 N VAL A 103 SHEET 1 AA5 5 ASP A 336 VAL A 340 0 SHEET 2 AA5 5 ARG A 188 LEU A 195 1 N TYR A 193 O ILE A 338 SHEET 3 AA5 5 PHE A 200 GLU A 209 -1 O ILE A 205 N ILE A 190 SHEET 4 AA5 5 LYS A 214 ASP A 224 -1 O THR A 215 N ASP A 208 SHEET 5 AA5 5 VAL A 389 LEU A 392 1 O LEU A 392 N PHE A 216 SHEET 1 AA6 2 GLN A 278 ASP A 289 0 SHEET 2 AA6 2 GLY A 292 THR A 301 -1 O VAL A 300 N THR A 279 SHEET 1 AA7 4 VAL A 407 ILE A 412 0 SHEET 2 AA7 4 LEU A 399 THR A 403 -1 N ILE A 401 O THR A 409 SHEET 3 AA7 4 ALA A 435 GLN A 442 -1 O LEU A 441 N GLY A 400 SHEET 4 AA7 4 LYS A 452 ASP A 460 -1 O PHE A 457 N ILE A 438 SHEET 1 AA8 5 LYS A 498 LYS A 502 0 SHEET 2 AA8 5 LEU A 484 ASP A 490 -1 N ALA A 488 O ILE A 499 SHEET 3 AA8 5 ILE A 472 ILE A 478 -1 N ASP A 477 O HIS A 485 SHEET 4 AA8 5 THR A 420 THR A 428 -1 N PHE A 426 O ILE A 472 SHEET 5 AA8 5 ARG A 547 LEU A 549 1 O LEU A 549 N SER A 427 LINK O3G ATP A 601 MG MG A 602 1555 1555 2.07 LINK O1B ATP A 601 MG MG A 602 1555 1555 1.96 LINK MG MG A 602 O HOH A 721 1555 1555 2.16 LINK MG MG A 602 O HOH A 740 1555 1555 2.09 LINK MG MG A 602 O HOH A 748 1555 1555 2.07 LINK MG MG A 602 O HOH A 776 1555 1555 2.15 CISPEP 1 ILE A 418 PRO A 419 0 -4.28 CRYST1 145.135 145.135 122.212 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006890 0.003978 0.000000 0.00000 SCALE2 0.000000 0.007956 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008183 0.00000