HEADER ISOMERASE 25-DEC-20 7L75 TITLE CRYSTAL STRUCTURE OF PEPTIDYLPROLYL ISOMERASE PRSA FROM STREPTOCOCCUS TITLE 2 MUTANS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: FOLDASE PROTEIN PRSA; COMPND 3 CHAIN: A, B; COMPND 4 EC: 5.2.1.8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS MUTANS; SOURCE 3 ORGANISM_TAXID: 1309; SOURCE 4 STRAIN: ATCC 700610 / UA159; SOURCE 5 GENE: PRSA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: MAGIC; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS KEYWDS 2 DISEASES, CSGID, PEPTIDYLPROLYL ISOMERASE, PRSA, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA,Z.WAWRZAK,K.J.F.SATCHELL,CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 20-NOV-24 7L75 1 REMARK REVDAT 3 15-NOV-23 7L75 1 REMARK REVDAT 2 18-OCT-23 7L75 1 REMARK REVDAT 1 01-DEC-21 7L75 0 JRNL AUTH G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA,Z.WAWRZAK,K.J.F.SATCHELL, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF PEPTIDYLPROLYL ISOMERASE PRSA FROM JRNL TITL 2 STREPTOCOCCUS MUTANS. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.46 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 12118 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.268 REMARK 3 R VALUE (WORKING SET) : 0.266 REMARK 3 FREE R VALUE : 0.310 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 611 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 885 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3760 REMARK 3 BIN FREE R VALUE SET COUNT : 48 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4198 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 126.3 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 155.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.90000 REMARK 3 B22 (A**2) : -6.20000 REMARK 3 B33 (A**2) : 2.97000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 7.08000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.587 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.674 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 92.399 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4286 ; 0.002 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4180 ; 0.001 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5751 ; 1.100 ; 1.652 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9719 ; 0.283 ; 1.603 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 531 ; 0.724 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 187 ; 6.891 ;25.508 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 843 ; 4.315 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ; 3.242 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 575 ; 0.045 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4737 ; 0.054 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 871 ; 0.049 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 28 A 54 REMARK 3 ORIGIN FOR THE GROUP (A): 28.9005 55.0380 -5.3091 REMARK 3 T TENSOR REMARK 3 T11: 0.4265 T22: 0.5568 REMARK 3 T33: 1.1971 T12: 0.0255 REMARK 3 T13: 0.0605 T23: -0.0870 REMARK 3 L TENSOR REMARK 3 L11: 20.4727 L22: 6.8154 REMARK 3 L33: 33.1059 L12: 1.6255 REMARK 3 L13: -21.2218 L23: 6.8661 REMARK 3 S TENSOR REMARK 3 S11: 1.2560 S12: 1.4764 S13: -0.1315 REMARK 3 S21: -1.3292 S22: 0.0352 S23: -0.8461 REMARK 3 S31: -3.1353 S32: -1.4787 S33: -1.2912 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 55 A 85 REMARK 3 ORIGIN FOR THE GROUP (A): 21.0479 35.2679 13.6141 REMARK 3 T TENSOR REMARK 3 T11: 0.4127 T22: 0.9611 REMARK 3 T33: 0.7319 T12: 0.0703 REMARK 3 T13: -0.2668 T23: 0.0553 REMARK 3 L TENSOR REMARK 3 L11: 5.0082 L22: 11.8676 REMARK 3 L33: 6.5240 L12: -4.8094 REMARK 3 L13: 2.3888 L23: 0.7878 REMARK 3 S TENSOR REMARK 3 S11: -0.3659 S12: -0.4010 S13: 0.3276 REMARK 3 S21: 0.2666 S22: 0.0938 S23: -1.7616 REMARK 3 S31: 0.1342 S32: -0.1425 S33: 0.2721 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 86 A 150 REMARK 3 ORIGIN FOR THE GROUP (A): 8.4966 32.3117 19.0591 REMARK 3 T TENSOR REMARK 3 T11: 1.1790 T22: 1.3916 REMARK 3 T33: 0.3883 T12: 0.2002 REMARK 3 T13: -0.5309 T23: 0.0927 REMARK 3 L TENSOR REMARK 3 L11: 5.3357 L22: 4.1628 REMARK 3 L33: 0.1787 L12: 1.0886 REMARK 3 L13: -0.9336 L23: 0.0332 REMARK 3 S TENSOR REMARK 3 S11: -0.1549 S12: -0.1482 S13: -0.4458 REMARK 3 S21: 0.1091 S22: 0.0922 S23: -0.4267 REMARK 3 S31: 0.0201 S32: 0.0818 S33: 0.0627 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 151 A 208 REMARK 3 ORIGIN FOR THE GROUP (A): -18.8080 25.5968 23.3810 REMARK 3 T TENSOR REMARK 3 T11: 0.7696 T22: 0.5832 REMARK 3 T33: 0.4924 T12: 0.0372 REMARK 3 T13: -0.0838 T23: -0.1560 REMARK 3 L TENSOR REMARK 3 L11: 11.8629 L22: 4.8907 REMARK 3 L33: 7.0938 L12: 2.6699 REMARK 3 L13: 0.5693 L23: 0.2074 REMARK 3 S TENSOR REMARK 3 S11: -0.3029 S12: -0.0903 S13: -0.4270 REMARK 3 S21: -0.0894 S22: -0.0288 S23: 0.1614 REMARK 3 S31: 0.5761 S32: -0.1442 S33: 0.3318 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 209 A 237 REMARK 3 ORIGIN FOR THE GROUP (A): -17.2260 29.7650 24.4569 REMARK 3 T TENSOR REMARK 3 T11: 0.7020 T22: 0.5258 REMARK 3 T33: 0.4388 T12: 0.0233 REMARK 3 T13: -0.1772 T23: -0.2888 REMARK 3 L TENSOR REMARK 3 L11: 14.0876 L22: 5.1665 REMARK 3 L33: 2.6445 L12: 1.7999 REMARK 3 L13: -0.4694 L23: 0.9377 REMARK 3 S TENSOR REMARK 3 S11: 0.1602 S12: -0.3131 S13: 0.3860 REMARK 3 S21: 0.5368 S22: -0.7429 S23: 0.1962 REMARK 3 S31: 0.4327 S32: -0.3782 S33: 0.5827 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 238 A 294 REMARK 3 ORIGIN FOR THE GROUP (A): 13.0624 39.6244 28.1339 REMARK 3 T TENSOR REMARK 3 T11: 1.4677 T22: 1.5327 REMARK 3 T33: 0.7158 T12: 0.2761 REMARK 3 T13: -0.7951 T23: -0.1478 REMARK 3 L TENSOR REMARK 3 L11: 8.3441 L22: 1.7101 REMARK 3 L33: 8.5864 L12: 3.2494 REMARK 3 L13: -6.4629 L23: -2.8446 REMARK 3 S TENSOR REMARK 3 S11: 0.0014 S12: -0.3492 S13: -0.2311 REMARK 3 S21: 0.7600 S22: 0.2309 S23: -0.5519 REMARK 3 S31: -0.8514 S32: -0.3725 S33: -0.2323 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 29 B 85 REMARK 3 ORIGIN FOR THE GROUP (A): 24.4255 57.9271 -5.2287 REMARK 3 T TENSOR REMARK 3 T11: 0.2209 T22: 0.7997 REMARK 3 T33: 0.6914 T12: -0.1470 REMARK 3 T13: 0.0319 T23: -0.1380 REMARK 3 L TENSOR REMARK 3 L11: 2.2834 L22: 5.5105 REMARK 3 L33: 6.1092 L12: -0.5813 REMARK 3 L13: 1.5633 L23: -3.2968 REMARK 3 S TENSOR REMARK 3 S11: -0.1890 S12: 0.2373 S13: 0.1362 REMARK 3 S21: -0.6587 S22: 0.2358 S23: -1.4170 REMARK 3 S31: 0.4931 S32: -0.0605 S33: -0.0468 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 86 B 131 REMARK 3 ORIGIN FOR THE GROUP (A): 12.5572 68.8090 -11.4317 REMARK 3 T TENSOR REMARK 3 T11: 0.3928 T22: 0.9977 REMARK 3 T33: 0.1459 T12: -0.2131 REMARK 3 T13: -0.1311 T23: -0.0479 REMARK 3 L TENSOR REMARK 3 L11: 3.4871 L22: 7.4560 REMARK 3 L33: 10.5795 L12: -2.1169 REMARK 3 L13: -1.5308 L23: 2.4394 REMARK 3 S TENSOR REMARK 3 S11: -0.6253 S12: 0.1050 S13: -0.0357 REMARK 3 S21: 0.4987 S22: 0.4590 S23: -0.6138 REMARK 3 S31: 0.5541 S32: -0.6027 S33: 0.1663 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 132 B 167 REMARK 3 ORIGIN FOR THE GROUP (A): -12.6796 71.9522 -30.1203 REMARK 3 T TENSOR REMARK 3 T11: 1.0833 T22: 0.3539 REMARK 3 T33: 0.5989 T12: 0.1736 REMARK 3 T13: -0.2355 T23: 0.0330 REMARK 3 L TENSOR REMARK 3 L11: 14.8841 L22: 2.5066 REMARK 3 L33: 1.2744 L12: -0.0095 REMARK 3 L13: 1.9060 L23: 0.0811 REMARK 3 S TENSOR REMARK 3 S11: -0.0373 S12: 1.0679 S13: 0.7993 REMARK 3 S21: -0.9244 S22: -0.3854 S23: 0.4107 REMARK 3 S31: -0.5304 S32: -0.1843 S33: 0.4228 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 168 B 211 REMARK 3 ORIGIN FOR THE GROUP (A): -16.0475 77.3278 -26.4449 REMARK 3 T TENSOR REMARK 3 T11: 1.1154 T22: 0.5589 REMARK 3 T33: 0.8094 T12: -0.1235 REMARK 3 T13: -0.3596 T23: -0.0592 REMARK 3 L TENSOR REMARK 3 L11: 7.9981 L22: 2.9021 REMARK 3 L33: 4.8207 L12: 1.0961 REMARK 3 L13: -5.6986 L23: 0.4237 REMARK 3 S TENSOR REMARK 3 S11: 0.3647 S12: 0.1654 S13: 0.8319 REMARK 3 S21: -0.7870 S22: -0.0952 S23: 0.2670 REMARK 3 S31: -0.9576 S32: 0.0581 S33: -0.2695 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 212 B 237 REMARK 3 ORIGIN FOR THE GROUP (A): -17.2345 71.3279 -22.8981 REMARK 3 T TENSOR REMARK 3 T11: 0.6022 T22: 0.5103 REMARK 3 T33: 0.4789 T12: -0.1962 REMARK 3 T13: -0.2946 T23: -0.2230 REMARK 3 L TENSOR REMARK 3 L11: 18.9571 L22: 6.1773 REMARK 3 L33: 8.2175 L12: -3.6382 REMARK 3 L13: -0.6600 L23: -0.9059 REMARK 3 S TENSOR REMARK 3 S11: 0.0593 S12: -0.7934 S13: 0.3459 REMARK 3 S21: -0.3501 S22: 0.2399 S23: 0.5447 REMARK 3 S31: -0.5759 S32: -0.1219 S33: -0.2992 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 238 B 294 REMARK 3 ORIGIN FOR THE GROUP (A): 13.2426 62.0313 -28.1753 REMARK 3 T TENSOR REMARK 3 T11: 2.4905 T22: 1.9905 REMARK 3 T33: 0.9905 T12: -0.2166 REMARK 3 T13: 0.4042 T23: -0.1936 REMARK 3 L TENSOR REMARK 3 L11: 3.7823 L22: 0.4138 REMARK 3 L33: 4.1630 L12: 0.7260 REMARK 3 L13: 2.0073 L23: 0.4433 REMARK 3 S TENSOR REMARK 3 S11: -0.0394 S12: 0.5900 S13: 0.2695 REMARK 3 S21: -0.7063 S22: 0.1759 S23: -0.3043 REMARK 3 S31: 0.8714 S32: -0.2079 S33: -0.1365 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7L75 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-DEC-20. REMARK 100 THE DEPOSITION ID IS D_1000253812. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : BE REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12763 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.150 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : 0.05600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 29.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.80100 REMARK 200 R SYM FOR SHELL (I) : 0.80100 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5TVL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN: 8.0 MG/ML, 0.01M TRIS HCL (PH REMARK 280 8.3);SCREEN: PEG'S II (A11), 0.2M MAGNESIUM CHLORIDE, 0.1M HEPES REMARK 280 (PH 7.5), 30% (W/V) PEG 4000., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.89300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.10350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.89300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.10350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 18 REMARK 465 ASN A 19 REMARK 465 ALA A 20 REMARK 465 ALA A 21 REMARK 465 CYS A 22 REMARK 465 SER A 23 REMARK 465 LYS A 24 REMARK 465 THR A 25 REMARK 465 ASN A 26 REMARK 465 GLN A 27 REMARK 465 SER B 18 REMARK 465 ASN B 19 REMARK 465 ALA B 20 REMARK 465 ALA B 21 REMARK 465 CYS B 22 REMARK 465 SER B 23 REMARK 465 LYS B 24 REMARK 465 THR B 25 REMARK 465 ASN B 26 REMARK 465 GLN B 27 REMARK 465 ASN B 28 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 204 CB - CA - C ANGL. DEV. = -11.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 35 105.64 -55.45 REMARK 500 ALA A 98 -39.85 -39.36 REMARK 500 ARG A 102 34.50 -82.11 REMARK 500 THR A 132 -169.36 -115.07 REMARK 500 LYS A 168 45.62 -98.30 REMARK 500 ASN A 181 -27.16 -145.63 REMARK 500 ASP A 185 -123.32 59.49 REMARK 500 ASP A 192 -133.64 -90.64 REMARK 500 ASN A 197 -43.64 -154.46 REMARK 500 LYS A 211 120.36 -29.87 REMARK 500 SER A 215 -157.03 -88.93 REMARK 500 THR A 224 -43.69 -135.80 REMARK 500 TYR A 226 9.91 56.26 REMARK 500 PRO A 228 109.41 -49.08 REMARK 500 THR A 236 -75.45 -96.23 REMARK 500 ASN A 242 168.09 76.28 REMARK 500 LYS A 283 -61.07 -100.64 REMARK 500 PHE A 287 31.76 -96.24 REMARK 500 LEU A 291 36.23 -91.55 REMARK 500 ILE B 31 -64.38 -95.36 REMARK 500 TYR B 71 23.17 -146.69 REMARK 500 SER B 94 3.01 -65.42 REMARK 500 LYS B 128 52.19 -98.40 REMARK 500 LYS B 129 -58.97 -142.11 REMARK 500 GLU B 130 39.17 -80.84 REMARK 500 GLN B 150 78.10 -100.57 REMARK 500 LYS B 168 61.47 -113.36 REMARK 500 ALA B 169 -65.79 -122.23 REMARK 500 ASP B 192 -147.57 -123.98 REMARK 500 LEU B 203 -66.73 -92.72 REMARK 500 ALA B 220 -166.02 -121.27 REMARK 500 THR B 239 -123.63 -104.89 REMARK 500 ASP B 240 150.02 176.78 REMARK 500 TRP B 245 -74.99 -87.68 REMARK 500 TYR B 248 76.67 -150.87 REMARK 500 LYS B 249 -65.36 -103.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP97045 RELATED DB: TARGETTRACK DBREF 7L75 A 20 294 UNP Q8CVC6 PRSA_STRMU 20 294 DBREF 7L75 B 20 294 UNP Q8CVC6 PRSA_STRMU 20 294 SEQADV 7L75 SER A 18 UNP Q8CVC6 EXPRESSION TAG SEQADV 7L75 ASN A 19 UNP Q8CVC6 EXPRESSION TAG SEQADV 7L75 SER B 18 UNP Q8CVC6 EXPRESSION TAG SEQADV 7L75 ASN B 19 UNP Q8CVC6 EXPRESSION TAG SEQRES 1 A 277 SER ASN ALA ALA CYS SER LYS THR ASN GLN ASN SER LYS SEQRES 2 A 277 ILE ALA THR MSE LYS GLY ASP THR ILE THR VAL ALA ASP SEQRES 3 A 277 PHE TYR ASN GLU VAL LYS ASN SER THR ALA SER LYS GLN SEQRES 4 A 277 ALA VAL LEU SER LEU LEU VAL SER LYS VAL PHE GLU LYS SEQRES 5 A 277 GLN TYR GLY ASP LYS VAL SER ASP LYS GLU VAL THR LYS SEQRES 6 A 277 ALA TYR ASN GLU ALA ALA LYS TYR TYR GLY ASP SER PHE SEQRES 7 A 277 SER SER ALA LEU ALA SER ARG GLY TYR THR LYS GLU ASP SEQRES 8 A 277 TYR LYS LYS GLN ILE ARG SER GLU LYS LEU ILE GLU TYR SEQRES 9 A 277 ALA VAL LYS GLU GLU ALA LYS LYS GLU ILE THR ASP ALA SEQRES 10 A 277 SER TYR LYS SER ALA TYR LYS ASP TYR LYS PRO GLU VAL SEQRES 11 A 277 THR ALA GLN VAL ILE GLN LEU ASP SER GLU ASP LYS ALA SEQRES 12 A 277 LYS SER VAL LEU GLU GLU ALA LYS ALA ASP GLY ALA ASP SEQRES 13 A 277 PHE ALA LYS ILE ALA LYS ASP ASN THR LYS GLY ASP LYS SEQRES 14 A 277 THR GLU TYR SER PHE ASP SER GLY SER THR ASN LEU PRO SEQRES 15 A 277 SER GLN VAL LEU SER ALA ALA LEU ASN LEU ASP LYS ASP SEQRES 16 A 277 GLY VAL SER ASP VAL ILE LYS ALA SER ASP SER THR THR SEQRES 17 A 277 TYR LYS PRO VAL TYR TYR ILE VAL LYS ILE THR LYS LYS SEQRES 18 A 277 THR ASP LYS ASN ALA ASP TRP LYS ALA TYR LYS LYS ARG SEQRES 19 A 277 LEU LYS GLU ILE ILE VAL SER GLN LYS LEU ASN ASP SER SEQRES 20 A 277 ASN PHE ARG ASN ALA VAL ILE GLY LYS ALA PHE LYS LYS SEQRES 21 A 277 ALA ASN VAL LYS ILE LYS ASP LYS ALA PHE SER GLU ILE SEQRES 22 A 277 LEU SER GLN TYR SEQRES 1 B 277 SER ASN ALA ALA CYS SER LYS THR ASN GLN ASN SER LYS SEQRES 2 B 277 ILE ALA THR MSE LYS GLY ASP THR ILE THR VAL ALA ASP SEQRES 3 B 277 PHE TYR ASN GLU VAL LYS ASN SER THR ALA SER LYS GLN SEQRES 4 B 277 ALA VAL LEU SER LEU LEU VAL SER LYS VAL PHE GLU LYS SEQRES 5 B 277 GLN TYR GLY ASP LYS VAL SER ASP LYS GLU VAL THR LYS SEQRES 6 B 277 ALA TYR ASN GLU ALA ALA LYS TYR TYR GLY ASP SER PHE SEQRES 7 B 277 SER SER ALA LEU ALA SER ARG GLY TYR THR LYS GLU ASP SEQRES 8 B 277 TYR LYS LYS GLN ILE ARG SER GLU LYS LEU ILE GLU TYR SEQRES 9 B 277 ALA VAL LYS GLU GLU ALA LYS LYS GLU ILE THR ASP ALA SEQRES 10 B 277 SER TYR LYS SER ALA TYR LYS ASP TYR LYS PRO GLU VAL SEQRES 11 B 277 THR ALA GLN VAL ILE GLN LEU ASP SER GLU ASP LYS ALA SEQRES 12 B 277 LYS SER VAL LEU GLU GLU ALA LYS ALA ASP GLY ALA ASP SEQRES 13 B 277 PHE ALA LYS ILE ALA LYS ASP ASN THR LYS GLY ASP LYS SEQRES 14 B 277 THR GLU TYR SER PHE ASP SER GLY SER THR ASN LEU PRO SEQRES 15 B 277 SER GLN VAL LEU SER ALA ALA LEU ASN LEU ASP LYS ASP SEQRES 16 B 277 GLY VAL SER ASP VAL ILE LYS ALA SER ASP SER THR THR SEQRES 17 B 277 TYR LYS PRO VAL TYR TYR ILE VAL LYS ILE THR LYS LYS SEQRES 18 B 277 THR ASP LYS ASN ALA ASP TRP LYS ALA TYR LYS LYS ARG SEQRES 19 B 277 LEU LYS GLU ILE ILE VAL SER GLN LYS LEU ASN ASP SER SEQRES 20 B 277 ASN PHE ARG ASN ALA VAL ILE GLY LYS ALA PHE LYS LYS SEQRES 21 B 277 ALA ASN VAL LYS ILE LYS ASP LYS ALA PHE SER GLU ILE SEQRES 22 B 277 LEU SER GLN TYR MODRES 7L75 MSE A 34 MET MODIFIED RESIDUE MODRES 7L75 MSE B 34 MET MODIFIED RESIDUE HET MSE A 34 8 HET MSE B 34 8 HET EPE A 301 15 HET CL A 302 1 HET CL A 303 1 HET CL A 304 1 HET EPE B 301 15 HET CL B 302 1 HET CL B 303 1 HET CL B 304 1 HETNAM MSE SELENOMETHIONINE HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM CL CHLORIDE ION HETSYN EPE HEPES FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 3 EPE 2(C8 H18 N2 O4 S) FORMUL 4 CL 6(CL 1-) HELIX 1 AA1 VAL A 41 LYS A 49 1 9 HELIX 2 AA2 SER A 51 TYR A 71 1 21 HELIX 3 AA3 SER A 76 GLY A 92 1 17 HELIX 4 AA4 SER A 94 ARG A 102 1 9 HELIX 5 AA5 THR A 105 ALA A 127 1 23 HELIX 6 AA6 THR A 132 ALA A 139 1 8 HELIX 7 AA7 SER A 156 LYS A 168 1 13 HELIX 8 AA8 ASP A 173 ASP A 180 1 8 HELIX 9 AA9 PRO A 199 ASN A 208 1 10 HELIX 10 AB1 ASP A 244 ALA A 247 5 4 HELIX 11 AB2 TYR A 248 LEU A 261 1 14 HELIX 12 AB3 ASP A 263 ALA A 278 1 16 HELIX 13 AB4 ASP A 284 SER A 292 5 9 HELIX 14 AB5 VAL B 41 LYS B 49 1 9 HELIX 15 AB6 SER B 51 GLY B 72 1 22 HELIX 16 AB7 ASP B 73 VAL B 75 5 3 HELIX 17 AB8 SER B 76 GLY B 92 1 17 HELIX 18 AB9 SER B 94 ARG B 102 1 9 HELIX 19 AC1 GLU B 107 LYS B 128 1 22 HELIX 20 AC2 THR B 132 ASP B 142 1 11 HELIX 21 AC3 SER B 156 ALA B 167 1 12 HELIX 22 AC4 GLY B 171 LYS B 179 5 9 HELIX 23 AC5 PRO B 199 ALA B 205 1 7 HELIX 24 AC6 ALA B 206 ASN B 208 5 3 HELIX 25 AC7 TRP B 245 TYR B 248 5 4 HELIX 26 AC8 LYS B 249 ASN B 262 1 14 HELIX 27 AC9 ASP B 263 ALA B 278 1 16 HELIX 28 AD1 ASP B 284 SER B 288 5 5 SHEET 1 AA1 3 ILE A 39 THR A 40 0 SHEET 2 AA1 3 LYS A 30 THR A 33 -1 N ILE A 31 O ILE A 39 SHEET 3 AA1 3 LYS B 281 ILE B 282 -1 O LYS B 281 N THR A 33 SHEET 1 AA2 4 GLU A 188 PHE A 191 0 SHEET 2 AA2 4 VAL A 147 LEU A 154 -1 N VAL A 147 O PHE A 191 SHEET 3 AA2 4 VAL A 229 LYS A 238 -1 O THR A 236 N THR A 148 SHEET 4 AA2 4 ILE A 218 ALA A 220 -1 N ALA A 220 O VAL A 229 SHEET 1 AA3 3 LYS A 281 ILE A 282 0 SHEET 2 AA3 3 LYS B 30 MSE B 34 -1 O THR B 33 N LYS A 281 SHEET 3 AA3 3 ASP B 37 THR B 40 -1 O ILE B 39 N ILE B 31 SHEET 1 AA4 3 GLU B 188 PHE B 191 0 SHEET 2 AA4 3 VAL B 147 GLN B 150 -1 N VAL B 147 O PHE B 191 SHEET 3 AA4 3 ILE B 235 LYS B 237 -1 O LYS B 237 N THR B 148 SHEET 1 AA5 3 GLN B 153 LEU B 154 0 SHEET 2 AA5 3 TYR B 230 TYR B 231 -1 O TYR B 230 N LEU B 154 SHEET 3 AA5 3 ILE B 218 LYS B 219 -1 N ILE B 218 O TYR B 231 LINK C THR A 33 N MSE A 34 1555 1555 1.33 LINK C MSE A 34 N LYS A 35 1555 1555 1.34 LINK C THR B 33 N MSE B 34 1555 1555 1.34 LINK C MSE B 34 N LYS B 35 1555 1555 1.34 CRYST1 133.786 66.207 90.247 90.00 113.11 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007475 0.000000 0.003190 0.00000 SCALE2 0.000000 0.015104 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012047 0.00000