HEADER SIGNALING PROTEIN/ACTIVATOR 20-JAN-21 7LGK TITLE CRYSTAL STRUCTURE OF SOLUBLE GUANYLATE CYCLASE ACTIVATOR RUNCACIGUAT TITLE 2 (BAY 1101042) BOUND TO NOSTOC H-NOX DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: H-NOX DOMAIN PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOSTOC SP. PCC 7120 = FACHB-418; SOURCE 3 ORGANISM_TAXID: 103690; SOURCE 4 STRAIN: PCC 7120 / SAG 25.82 / UTEX 2576; SOURCE 5 GENE: ALR2278; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SOLUBLE GUANYLYL CYCLASE, H-NOX, SIGNAL TRANSDUCTION, ACTIVATOR, KEYWDS 2 SIGNALING PROTEIN, SIGNALING PROTEIN-SIGNALING PROTEIN ACTIVATOR KEYWDS 3 COMPLEX, SIGNALING PROTEIN-ACTIVATOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR F.VAN DEN AKKER,V.KUMAR,M.SCHAEFER REVDAT 3 18-OCT-23 7LGK 1 REMARK REVDAT 2 26-MAY-21 7LGK 1 JRNL REVDAT 1 05-MAY-21 7LGK 0 JRNL AUTH M.G.HAHN,T.LAMPE,S.EL SHEIKH,N.GRIEBENOW,E.WOLTERING, JRNL AUTH 2 K.H.SCHLEMMER,L.DIETZ,M.GERISCH,F.WUNDER,E.M.BECKER-PELSTER, JRNL AUTH 3 T.MONDRITZKI,H.TINEL,A.KNORR,A.KERN,D.LANG,J.HUESER, JRNL AUTH 4 T.SCHOMBER,A.BENARDEAU,F.EITNER,H.TRUEBEL,J.MITTENDORF, JRNL AUTH 5 V.KUMAR,F.VAN DEN AKKER,M.SCHAEFER,V.GEISS,P.SANDNER, JRNL AUTH 6 J.P.STASCH JRNL TITL DISCOVERY OF THE SOLUBLE GUANYLATE CYCLASE ACTIVATOR JRNL TITL 2 RUNCACIGUAT (BAY 1101042). JRNL REF J.MED.CHEM. V. 64 5323 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 33872507 JRNL DOI 10.1021/ACS.JMEDCHEM.0C02154 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 30913 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1628 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2271 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.79 REMARK 3 BIN R VALUE (WORKING SET) : 0.1820 REMARK 3 BIN FREE R VALUE SET COUNT : 120 REMARK 3 BIN FREE R VALUE : 0.1980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2864 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 102 REMARK 3 SOLVENT ATOMS : 90 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.147 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.146 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.812 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3063 ; 0.027 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2813 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4146 ; 2.437 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6453 ; 1.212 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 370 ; 6.898 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;39.665 ;24.690 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 500 ;18.001 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;20.838 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 447 ; 0.151 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3433 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 686 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 1001 REMARK 3 ORIGIN FOR THE GROUP (A): -7.4222 8.7789 -20.5585 REMARK 3 T TENSOR REMARK 3 T11: 0.0268 T22: 0.0142 REMARK 3 T33: 0.0501 T12: 0.0053 REMARK 3 T13: 0.0035 T23: 0.0224 REMARK 3 L TENSOR REMARK 3 L11: 0.4313 L22: 0.9311 REMARK 3 L33: 0.6571 L12: 0.0592 REMARK 3 L13: -0.3414 L23: -0.3841 REMARK 3 S TENSOR REMARK 3 S11: -0.0149 S12: -0.0023 S13: 0.0618 REMARK 3 S21: 0.0397 S22: 0.0284 S23: -0.0096 REMARK 3 S31: -0.0716 S32: 0.0055 S33: -0.0135 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 1001 REMARK 3 ORIGIN FOR THE GROUP (A): -20.8364 -9.5649 -38.7157 REMARK 3 T TENSOR REMARK 3 T11: 0.0364 T22: 0.0312 REMARK 3 T33: 0.0148 T12: -0.0014 REMARK 3 T13: 0.0051 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 0.5382 L22: 1.0391 REMARK 3 L33: 0.7821 L12: -0.1617 REMARK 3 L13: 0.0377 L23: -0.4502 REMARK 3 S TENSOR REMARK 3 S11: -0.0148 S12: 0.0683 S13: 0.0575 REMARK 3 S21: -0.1599 S22: 0.0162 S23: -0.0237 REMARK 3 S31: 0.0821 S32: -0.0046 S33: -0.0013 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7LGK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JAN-21. REMARK 100 THE DEPOSITION ID IS D_1000254271. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32542 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 43.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.9800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4IAM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.5, 12% GLYCEROL, AND REMARK 280 1.5 M AMMONIUM SULFATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 61.99500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.99500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.99500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.99500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 61.99500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 61.99500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 61.99500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 61.99500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 61.99500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 61.99500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 61.99500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 61.99500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 61.99500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 61.99500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 61.99500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 61.99500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 61.99500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 61.99500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 41 CG GLU A 41 CD 0.091 REMARK 500 GLU A 72 CD GLU A 72 OE2 -0.068 REMARK 500 GLU A 85 CD GLU A 85 OE2 -0.089 REMARK 500 SER A 178 CB SER A 178 OG -0.092 REMARK 500 CYS B 122 CA CYS B 122 CB 0.139 REMARK 500 CYS B 122 CB CYS B 122 SG 0.230 REMARK 500 GLU B 172 CD GLU B 172 OE2 0.083 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 141 CB - CG - CD2 ANGL. DEV. = 11.2 DEGREES REMARK 500 ARG A 168 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP B 102 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP B 102 CB - CG - OD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 ARG B 116 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B 168 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B 168 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ASP B 173 CB - CG - OD2 ANGL. DEV. = -8.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 33 -78.39 -51.94 REMARK 500 ILE A 34 114.40 -24.67 REMARK 500 ARG A 116 78.07 -117.18 REMARK 500 SER A 126 -158.06 -116.61 REMARK 500 HIS B 17 -0.15 -141.11 REMARK 500 SER B 126 176.31 175.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XZ7 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue XZ7 B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 1005 DBREF 7LGK A 1 182 UNP Q8YUQ7 Q8YUQ7_NOSS1 1 182 DBREF 7LGK B 1 182 UNP Q8YUQ7 Q8YUQ7_NOSS1 1 182 SEQADV 7LGK ALA A 139 UNP Q8YUQ7 CYS 139 CONFLICT SEQADV 7LGK ALA B 139 UNP Q8YUQ7 CYS 139 CONFLICT SEQRES 1 A 182 MET TYR GLY LEU VAL ASN LYS ALA ILE GLN ASP MET ILE SEQRES 2 A 182 SER LYS HIS HIS GLY GLU ASP THR TRP GLU ALA ILE LYS SEQRES 3 A 182 GLN LYS ALA GLY LEU GLU ASP ILE ASP PHE PHE VAL GLY SEQRES 4 A 182 MET GLU ALA TYR SER ASP ASP VAL THR TYR HIS LEU VAL SEQRES 5 A 182 GLY ALA ALA SER GLU VAL LEU GLY LYS PRO ALA GLU GLU SEQRES 6 A 182 LEU LEU ILE ALA PHE GLY GLU TYR TRP VAL THR TYR THR SEQRES 7 A 182 SER GLU GLU GLY TYR GLY GLU LEU LEU ALA SER ALA GLY SEQRES 8 A 182 ASP SER LEU PRO GLU PHE MET GLU ASN LEU ASP ASN LEU SEQRES 9 A 182 HIS ALA ARG VAL GLY LEU SER PHE PRO GLN LEU ARG PRO SEQRES 10 A 182 PRO ALA PHE GLU CYS GLN HIS THR SER SER LYS SER MET SEQRES 11 A 182 GLU LEU HIS TYR GLN SER THR ARG ALA GLY LEU ALA PRO SEQRES 12 A 182 MET VAL LEU GLY LEU LEU HIS GLY LEU GLY LYS ARG PHE SEQRES 13 A 182 GLN THR LYS VAL GLU VAL THR GLN THR ALA PHE ARG GLU SEQRES 14 A 182 THR GLY GLU ASP HIS ASP ILE PHE SER ILE LYS TYR GLU SEQRES 1 B 182 MET TYR GLY LEU VAL ASN LYS ALA ILE GLN ASP MET ILE SEQRES 2 B 182 SER LYS HIS HIS GLY GLU ASP THR TRP GLU ALA ILE LYS SEQRES 3 B 182 GLN LYS ALA GLY LEU GLU ASP ILE ASP PHE PHE VAL GLY SEQRES 4 B 182 MET GLU ALA TYR SER ASP ASP VAL THR TYR HIS LEU VAL SEQRES 5 B 182 GLY ALA ALA SER GLU VAL LEU GLY LYS PRO ALA GLU GLU SEQRES 6 B 182 LEU LEU ILE ALA PHE GLY GLU TYR TRP VAL THR TYR THR SEQRES 7 B 182 SER GLU GLU GLY TYR GLY GLU LEU LEU ALA SER ALA GLY SEQRES 8 B 182 ASP SER LEU PRO GLU PHE MET GLU ASN LEU ASP ASN LEU SEQRES 9 B 182 HIS ALA ARG VAL GLY LEU SER PHE PRO GLN LEU ARG PRO SEQRES 10 B 182 PRO ALA PHE GLU CYS GLN HIS THR SER SER LYS SER MET SEQRES 11 B 182 GLU LEU HIS TYR GLN SER THR ARG ALA GLY LEU ALA PRO SEQRES 12 B 182 MET VAL LEU GLY LEU LEU HIS GLY LEU GLY LYS ARG PHE SEQRES 13 B 182 GLN THR LYS VAL GLU VAL THR GLN THR ALA PHE ARG GLU SEQRES 14 B 182 THR GLY GLU ASP HIS ASP ILE PHE SER ILE LYS TYR GLU HET XZ7 A1001 32 HET CL A1002 1 HET GOL A1003 6 HET GOL A1004 6 HET GOL A1005 6 HET XZ7 B1001 32 HET CL B1002 1 HET GOL B1003 6 HET GOL B1004 6 HET GOL B1005 6 HETNAM XZ7 RUNCACIGUAT HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN XZ7 (3S)-3-(4-CHLORO-3-{[(2S,3R)-2-(4-CHLOROPHENYL)-4,4,4- HETSYN 2 XZ7 TRIFLUORO-3-METHYLBUTANOYL]AMINO}PHENYL)-3- HETSYN 3 XZ7 CYCLOPROPYLPROPANOIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 XZ7 2(C23 H22 CL2 F3 N O3) FORMUL 4 CL 2(CL 1-) FORMUL 5 GOL 6(C3 H8 O3) FORMUL 13 HOH *90(H2 O) HELIX 1 AA1 TYR A 2 GLY A 18 1 17 HELIX 2 AA2 GLY A 18 ALA A 29 1 12 HELIX 3 AA3 SER A 44 GLY A 60 1 17 HELIX 4 AA4 PRO A 62 GLU A 80 1 19 HELIX 5 AA5 TYR A 83 SER A 89 1 7 HELIX 6 AA6 SER A 93 ASN A 100 1 8 HELIX 7 AA7 ASN A 100 PHE A 112 1 13 HELIX 8 AA8 LEU A 141 PHE A 156 1 16 HELIX 9 AA9 PHE A 167 GLY A 171 5 5 HELIX 10 AB1 TYR B 2 GLY B 18 1 17 HELIX 11 AB2 GLY B 18 ALA B 29 1 12 HELIX 12 AB3 SER B 44 GLY B 60 1 17 HELIX 13 AB4 PRO B 62 GLU B 81 1 20 HELIX 14 AB5 TYR B 83 SER B 89 1 7 HELIX 15 AB6 SER B 93 ASN B 100 1 8 HELIX 16 AB7 ASN B 100 PHE B 112 1 13 HELIX 17 AB8 LEU B 141 PHE B 156 1 16 HELIX 18 AB9 PHE B 167 GLY B 171 5 5 SHEET 1 AA1 4 ALA A 119 HIS A 124 0 SHEET 2 AA1 4 SER A 129 GLN A 135 -1 O GLU A 131 N GLN A 123 SHEET 3 AA1 4 ASP A 175 TYR A 181 -1 O ILE A 179 N MET A 130 SHEET 4 AA1 4 VAL A 160 ALA A 166 -1 N GLU A 161 O LYS A 180 SHEET 1 AA2 4 ALA B 119 SER B 126 0 SHEET 2 AA2 4 SER B 129 GLN B 135 -1 O HIS B 133 N GLU B 121 SHEET 3 AA2 4 ASP B 175 TYR B 181 -1 O ILE B 179 N MET B 130 SHEET 4 AA2 4 VAL B 160 ALA B 166 -1 N GLU B 161 O LYS B 180 SITE 1 AC1 16 MET A 1 TRP A 74 THR A 78 TYR A 83 SITE 2 AC1 16 LEU A 101 HIS A 105 LEU A 115 PRO A 118 SITE 3 AC1 16 PHE A 120 TYR A 134 SER A 136 ARG A 138 SITE 4 AC1 16 LEU A 141 MET A 144 LEU A 148 GOL A1003 SITE 1 AC2 3 ARG A 116 ARG A 138 GOL A1004 SITE 1 AC3 2 XZ7 A1001 HOH A1130 SITE 1 AC4 7 MET A 1 TYR A 43 ASP A 45 GLN A 114 SITE 2 AC4 7 ARG A 116 ARG A 138 CL A1002 SITE 1 AC5 4 HIS A 16 HIS A 17 LYS A 61 LYS B 128 SITE 1 AC6 16 TRP B 74 THR B 78 TYR B 83 LEU B 101 SITE 2 AC6 16 HIS B 105 LEU B 115 PRO B 118 PHE B 120 SITE 3 AC6 16 TYR B 134 SER B 136 ARG B 138 LEU B 141 SITE 4 AC6 16 MET B 144 LEU B 148 GOL B1004 HOH B1121 SITE 1 AC7 4 ARG B 116 ARG B 138 GOL B1003 HOH B1102 SITE 1 AC8 7 MET B 1 ALA B 42 TYR B 43 GLN B 114 SITE 2 AC8 7 ARG B 116 ARG B 138 CL B1002 SITE 1 AC9 3 VAL B 108 XZ7 B1001 HOH B1102 SITE 1 AD1 5 GLY B 82 SER B 89 HOH B1106 HOH B1118 SITE 2 AD1 5 HOH B1119 CRYST1 123.990 123.990 123.990 90.00 90.00 90.00 P 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008065 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008065 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008065 0.00000