data_7LIK # _entry.id 7LIK # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7LIK pdb_00007lik 10.2210/pdb7lik/pdb WWPDB D_1000254435 ? ? EMDB EMD-23381 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-02-09 2 'Structure model' 1 1 2022-02-16 3 'Structure model' 1 2 2024-05-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' em_3d_fitting_list 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_em_3d_fitting_list.accession_code' 13 3 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 14 3 'Structure model' '_em_3d_fitting_list.source_name' 15 3 'Structure model' '_em_3d_fitting_list.type' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7LIK _pdbx_database_status.recvd_initial_deposition_date 2021-01-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB . EMD-23381 'associated EM volume' EMDB . EMD-23379 'other EM volume' EMDB . EMD-23380 'other EM volume' EMDB . EMD-23382 'other EM volume' EMDB . EMD-23383 'other EM volume' EMDB . EMD-23384 'other EM volume' EMDB . EMD-23385 'other EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Andreas, M.P.' 1 ? 'Adamson, L.' 2 ? 'Tasneem, N.' 3 ? 'Close, W.' 4 ? 'Giessen, T.' 5 0000-0001-6328-2031 'Lau, Y.H.' 6 0000-0001-6560-8410 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Adv' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2375-2548 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first eabl7346 _citation.page_last eabl7346 _citation.title 'Pore structure controls stability and molecular flux in engineered protein cages.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1126/sciadv.abl7346 _citation.pdbx_database_id_PubMed 35119930 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Adamson, L.S.R.' 1 0000-0002-9862-9557 primary 'Tasneem, N.' 2 0000-0002-1125-7149 primary 'Andreas, M.P.' 3 0000-0001-8871-3053 primary 'Close, W.' 4 0000-0002-1481-7068 primary 'Jenner, E.N.' 5 0000-0003-2696-2534 primary 'Szyszka, T.N.' 6 0000-0002-9921-3086 primary 'Young, R.' 7 ? primary 'Cheah, L.C.' 8 0000-0002-0072-2885 primary 'Norman, A.' 9 ? primary 'MacDermott-Opeskin, H.I.' 10 0000-0002-7393-7457 primary ;O'Mara, M.L. ; 11 0000-0002-8764-1585 primary 'Sainsbury, F.' 12 0000-0001-8152-3820 primary 'Giessen, T.W.' 13 0000-0001-6328-2031 primary 'Lau, Y.H.' 14 0000-0001-6560-8410 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Maritimacin 30535.834 1 3.4.-.- H187R ? ? 2 non-polymer syn RIBOFLAVIN 376.364 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Thermotoga bacteriocin, Encapsulin Nanocompartment Pore' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MEFLKRSFAPLTEKQWQEIDNRAREIFKTQLYGRKFVDVEGPYGWEYAAHPLGEVEVLSDENEVVKWGLRKSLPLIELRA TFTLDLWELDNLERGKPNVDLSSLEETVRKVAEFEDEVIFRGCEKSGVKGLLSFEERKIECGSTPKDLLEAIVRALSIFS KDGIEGPYTLVINTDRWINFLKEEAGRYPLEKRVEECLRGGKIITTPRIEDALVVSERGGDFKLILGQDLSIGYEDREKD AVRLFITETFTFQVVNPEALILLKF ; _entity_poly.pdbx_seq_one_letter_code_can ;MEFLKRSFAPLTEKQWQEIDNRAREIFKTQLYGRKFVDVEGPYGWEYAAHPLGEVEVLSDENEVVKWGLRKSLPLIELRA TFTLDLWELDNLERGKPNVDLSSLEETVRKVAEFEDEVIFRGCEKSGVKGLLSFEERKIECGSTPKDLLEAIVRALSIFS KDGIEGPYTLVINTDRWINFLKEEAGRYPLEKRVEECLRGGKIITTPRIEDALVVSERGGDFKLILGQDLSIGYEDREKD AVRLFITETFTFQVVNPEALILLKF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name RIBOFLAVIN _pdbx_entity_nonpoly.comp_id RBF # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 PHE n 1 4 LEU n 1 5 LYS n 1 6 ARG n 1 7 SER n 1 8 PHE n 1 9 ALA n 1 10 PRO n 1 11 LEU n 1 12 THR n 1 13 GLU n 1 14 LYS n 1 15 GLN n 1 16 TRP n 1 17 GLN n 1 18 GLU n 1 19 ILE n 1 20 ASP n 1 21 ASN n 1 22 ARG n 1 23 ALA n 1 24 ARG n 1 25 GLU n 1 26 ILE n 1 27 PHE n 1 28 LYS n 1 29 THR n 1 30 GLN n 1 31 LEU n 1 32 TYR n 1 33 GLY n 1 34 ARG n 1 35 LYS n 1 36 PHE n 1 37 VAL n 1 38 ASP n 1 39 VAL n 1 40 GLU n 1 41 GLY n 1 42 PRO n 1 43 TYR n 1 44 GLY n 1 45 TRP n 1 46 GLU n 1 47 TYR n 1 48 ALA n 1 49 ALA n 1 50 HIS n 1 51 PRO n 1 52 LEU n 1 53 GLY n 1 54 GLU n 1 55 VAL n 1 56 GLU n 1 57 VAL n 1 58 LEU n 1 59 SER n 1 60 ASP n 1 61 GLU n 1 62 ASN n 1 63 GLU n 1 64 VAL n 1 65 VAL n 1 66 LYS n 1 67 TRP n 1 68 GLY n 1 69 LEU n 1 70 ARG n 1 71 LYS n 1 72 SER n 1 73 LEU n 1 74 PRO n 1 75 LEU n 1 76 ILE n 1 77 GLU n 1 78 LEU n 1 79 ARG n 1 80 ALA n 1 81 THR n 1 82 PHE n 1 83 THR n 1 84 LEU n 1 85 ASP n 1 86 LEU n 1 87 TRP n 1 88 GLU n 1 89 LEU n 1 90 ASP n 1 91 ASN n 1 92 LEU n 1 93 GLU n 1 94 ARG n 1 95 GLY n 1 96 LYS n 1 97 PRO n 1 98 ASN n 1 99 VAL n 1 100 ASP n 1 101 LEU n 1 102 SER n 1 103 SER n 1 104 LEU n 1 105 GLU n 1 106 GLU n 1 107 THR n 1 108 VAL n 1 109 ARG n 1 110 LYS n 1 111 VAL n 1 112 ALA n 1 113 GLU n 1 114 PHE n 1 115 GLU n 1 116 ASP n 1 117 GLU n 1 118 VAL n 1 119 ILE n 1 120 PHE n 1 121 ARG n 1 122 GLY n 1 123 CYS n 1 124 GLU n 1 125 LYS n 1 126 SER n 1 127 GLY n 1 128 VAL n 1 129 LYS n 1 130 GLY n 1 131 LEU n 1 132 LEU n 1 133 SER n 1 134 PHE n 1 135 GLU n 1 136 GLU n 1 137 ARG n 1 138 LYS n 1 139 ILE n 1 140 GLU n 1 141 CYS n 1 142 GLY n 1 143 SER n 1 144 THR n 1 145 PRO n 1 146 LYS n 1 147 ASP n 1 148 LEU n 1 149 LEU n 1 150 GLU n 1 151 ALA n 1 152 ILE n 1 153 VAL n 1 154 ARG n 1 155 ALA n 1 156 LEU n 1 157 SER n 1 158 ILE n 1 159 PHE n 1 160 SER n 1 161 LYS n 1 162 ASP n 1 163 GLY n 1 164 ILE n 1 165 GLU n 1 166 GLY n 1 167 PRO n 1 168 TYR n 1 169 THR n 1 170 LEU n 1 171 VAL n 1 172 ILE n 1 173 ASN n 1 174 THR n 1 175 ASP n 1 176 ARG n 1 177 TRP n 1 178 ILE n 1 179 ASN n 1 180 PHE n 1 181 LEU n 1 182 LYS n 1 183 GLU n 1 184 GLU n 1 185 ALA n 1 186 GLY n 1 187 ARG n 1 188 TYR n 1 189 PRO n 1 190 LEU n 1 191 GLU n 1 192 LYS n 1 193 ARG n 1 194 VAL n 1 195 GLU n 1 196 GLU n 1 197 CYS n 1 198 LEU n 1 199 ARG n 1 200 GLY n 1 201 GLY n 1 202 LYS n 1 203 ILE n 1 204 ILE n 1 205 THR n 1 206 THR n 1 207 PRO n 1 208 ARG n 1 209 ILE n 1 210 GLU n 1 211 ASP n 1 212 ALA n 1 213 LEU n 1 214 VAL n 1 215 VAL n 1 216 SER n 1 217 GLU n 1 218 ARG n 1 219 GLY n 1 220 GLY n 1 221 ASP n 1 222 PHE n 1 223 LYS n 1 224 LEU n 1 225 ILE n 1 226 LEU n 1 227 GLY n 1 228 GLN n 1 229 ASP n 1 230 LEU n 1 231 SER n 1 232 ILE n 1 233 GLY n 1 234 TYR n 1 235 GLU n 1 236 ASP n 1 237 ARG n 1 238 GLU n 1 239 LYS n 1 240 ASP n 1 241 ALA n 1 242 VAL n 1 243 ARG n 1 244 LEU n 1 245 PHE n 1 246 ILE n 1 247 THR n 1 248 GLU n 1 249 THR n 1 250 PHE n 1 251 THR n 1 252 PHE n 1 253 GLN n 1 254 VAL n 1 255 VAL n 1 256 ASN n 1 257 PRO n 1 258 GLU n 1 259 ALA n 1 260 LEU n 1 261 ILE n 1 262 LEU n 1 263 LEU n 1 264 LYS n 1 265 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 265 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TM_0785 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 43589 / MSB8 / DSM 3109 / JCM 10099' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 243274 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RBF non-polymer . RIBOFLAVIN 'RIBOFLAVINE; VITAMIN B2' 'C17 H20 N4 O6' 376.364 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLU 2 2 2 GLU GLU A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 TRP 16 16 16 TRP TRP A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 GLN 30 30 30 GLN GLN A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 GLY 44 44 44 GLY GLY A . n A 1 45 TRP 45 45 45 TRP TRP A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 HIS 50 50 50 HIS HIS A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 TRP 67 67 67 TRP TRP A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 PRO 74 74 74 PRO PRO A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 PHE 82 82 82 PHE PHE A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 TRP 87 87 87 TRP TRP A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 PRO 97 97 97 PRO PRO A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 LEU 101 101 101 LEU LEU A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 SER 103 103 103 SER SER A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 CYS 123 123 123 CYS CYS A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 GLY 127 127 127 GLY GLY A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 PHE 134 134 134 PHE PHE A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 GLU 136 136 136 GLU GLU A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 CYS 141 141 141 CYS CYS A . n A 1 142 GLY 142 142 142 GLY GLY A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 PRO 145 145 145 PRO PRO A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 ILE 152 152 152 ILE ILE A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 ARG 154 154 154 ARG ARG A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 ILE 158 158 158 ILE ILE A . n A 1 159 PHE 159 159 159 PHE PHE A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 LYS 161 161 161 LYS LYS A . n A 1 162 ASP 162 162 162 ASP ASP A . n A 1 163 GLY 163 163 163 GLY GLY A . n A 1 164 ILE 164 164 164 ILE ILE A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 PRO 167 167 167 PRO PRO A . n A 1 168 TYR 168 168 168 TYR TYR A . n A 1 169 THR 169 169 169 THR THR A . n A 1 170 LEU 170 170 170 LEU LEU A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 ILE 172 172 172 ILE ILE A . n A 1 173 ASN 173 173 173 ASN ASN A . n A 1 174 THR 174 174 174 THR THR A . n A 1 175 ASP 175 175 175 ASP ASP A . n A 1 176 ARG 176 176 176 ARG ARG A . n A 1 177 TRP 177 177 177 TRP TRP A . n A 1 178 ILE 178 178 178 ILE ILE A . n A 1 179 ASN 179 179 179 ASN ASN A . n A 1 180 PHE 180 180 180 PHE PHE A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 LYS 182 182 182 LYS LYS A . n A 1 183 GLU 183 183 183 GLU GLU A . n A 1 184 GLU 184 184 184 GLU GLU A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 ARG 187 187 187 ARG ARG A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 PRO 189 189 189 PRO PRO A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 GLU 191 191 191 GLU GLU A . n A 1 192 LYS 192 192 192 LYS LYS A . n A 1 193 ARG 193 193 193 ARG ARG A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 GLU 195 195 195 GLU GLU A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 CYS 197 197 197 CYS CYS A . n A 1 198 LEU 198 198 198 LEU LEU A . n A 1 199 ARG 199 199 199 ARG ARG A . n A 1 200 GLY 200 200 200 GLY GLY A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 LYS 202 202 202 LYS LYS A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 ILE 204 204 204 ILE ILE A . n A 1 205 THR 205 205 205 THR THR A . n A 1 206 THR 206 206 206 THR THR A . n A 1 207 PRO 207 207 207 PRO PRO A . n A 1 208 ARG 208 208 208 ARG ARG A . n A 1 209 ILE 209 209 209 ILE ILE A . n A 1 210 GLU 210 210 210 GLU GLU A . n A 1 211 ASP 211 211 211 ASP ASP A . n A 1 212 ALA 212 212 212 ALA ALA A . n A 1 213 LEU 213 213 213 LEU LEU A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 VAL 215 215 215 VAL VAL A . n A 1 216 SER 216 216 216 SER SER A . n A 1 217 GLU 217 217 217 GLU GLU A . n A 1 218 ARG 218 218 218 ARG ARG A . n A 1 219 GLY 219 219 219 GLY GLY A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 ASP 221 221 221 ASP ASP A . n A 1 222 PHE 222 222 222 PHE PHE A . n A 1 223 LYS 223 223 223 LYS LYS A . n A 1 224 LEU 224 224 224 LEU LEU A . n A 1 225 ILE 225 225 225 ILE ILE A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 GLY 227 227 227 GLY GLY A . n A 1 228 GLN 228 228 228 GLN GLN A . n A 1 229 ASP 229 229 229 ASP ASP A . n A 1 230 LEU 230 230 230 LEU LEU A . n A 1 231 SER 231 231 231 SER SER A . n A 1 232 ILE 232 232 232 ILE ILE A . n A 1 233 GLY 233 233 233 GLY GLY A . n A 1 234 TYR 234 234 234 TYR TYR A . n A 1 235 GLU 235 235 235 GLU GLU A . n A 1 236 ASP 236 236 236 ASP ASP A . n A 1 237 ARG 237 237 237 ARG ARG A . n A 1 238 GLU 238 238 238 GLU GLU A . n A 1 239 LYS 239 239 239 LYS LYS A . n A 1 240 ASP 240 240 240 ASP ASP A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 VAL 242 242 242 VAL VAL A . n A 1 243 ARG 243 243 243 ARG ARG A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 PHE 245 245 245 PHE PHE A . n A 1 246 ILE 246 246 246 ILE ILE A . n A 1 247 THR 247 247 247 THR THR A . n A 1 248 GLU 248 248 248 GLU GLU A . n A 1 249 THR 249 249 249 THR THR A . n A 1 250 PHE 250 250 250 PHE PHE A . n A 1 251 THR 251 251 251 THR THR A . n A 1 252 PHE 252 252 252 PHE PHE A . n A 1 253 GLN 253 253 253 GLN GLN A . n A 1 254 VAL 254 254 254 VAL VAL A . n A 1 255 VAL 255 255 255 VAL VAL A . n A 1 256 ASN 256 256 256 ASN ASN A . n A 1 257 PRO 257 257 257 PRO PRO A . n A 1 258 GLU 258 258 258 GLU GLU A . n A 1 259 ALA 259 259 259 ALA ALA A . n A 1 260 LEU 260 260 260 LEU LEU A . n A 1 261 ILE 261 261 261 ILE ILE A . n A 1 262 LEU 262 262 262 LEU LEU A . n A 1 263 LEU 263 263 263 LEU LEU A . n A 1 264 LYS 264 264 264 LYS LYS A . n A 1 265 PHE 265 265 265 PHE PHE A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id RBF _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 301 _pdbx_nonpoly_scheme.auth_seq_num 298 _pdbx_nonpoly_scheme.pdb_mon_id RBF _pdbx_nonpoly_scheme.auth_mon_id RBF _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 7LIK _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7LIK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7LIK _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 7LIK _struct.title 'Thermotoga maritima Encapsulin Nanocompartment Pore Mutant S1R' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7LIK _struct_keywords.text 'Encapsulin, Nanocompartment, VIRUS LIKE PARTICLE' _struct_keywords.pdbx_keywords 'VIRUS LIKE PARTICLE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MARIT_THEMA _struct_ref.pdbx_db_accession Q9WZP2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEFLKRSFAPLTEKQWQEIDNRAREIFKTQLYGRKFVDVEGPYGWEYAAHPLGEVEVLSDENEVVKWGLRKSLPLIELRA TFTLDLWELDNLERGKPNVDLSSLEETVRKVAEFEDEVIFRGCEKSGVKGLLSFEERKIECGSTPKDLLEAIVRALSIFS KDGIEGPYTLVINTDRWINFLKEEAGHYPLEKRVEECLRGGKIITTPRIEDALVVSERGGDFKLILGQDLSIGYEDREKD AVRLFITETFTFQVVNPEALILLKF ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7LIK _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 265 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9WZP2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 265 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 265 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 7LIK _struct_ref_seq_dif.mon_id ARG _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 187 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9WZP2 _struct_ref_seq_dif.db_mon_id HIS _struct_ref_seq_dif.pdbx_seq_db_seq_num 187 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 187 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 'complete icosahedral assembly' ? 60-meric 60 2 'icosahedral asymmetric unit' ? monomeric 1 3 'icosahedral pentamer' ? pentameric 5 4 'icosahedral 23 hexamer' ? hexameric 6 5 'icosahedral asymmetric unit, std point frame' ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 '(1-60)' A,B 2 1 A,B 3 '(1-5)' A,B 4 '(1,2,6,10,23,24)' A,B 5 P A,B # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'light scattering' ? 2 1 microscopy ? 3 1 'gel filtration' ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] P 'transform to point frame' ? ? -0.50000059 0.30901812 0.80901620 -116.28939 -0.30901572 0.80901686 -0.50000100 -0.00027 -0.80901712 -0.49999952 -0.30901745 304.44923 1 'identity operation' 1_555 x,y,z 1.00000000 0.00000000 0.00000000 0.00000 0.00000000 1.00000000 0.00000000 0.00000 0.00000000 0.00000000 1.00000000 0.00000 2 'point symmetry operation' ? ? 0.80901633 0.50000067 0.30901765 -116.28954 -0.50000107 0.30901700 0.80901633 71.87110 0.30901701 -0.80901658 0.50000066 188.16003 3 'point symmetry operation' ? ? 0.49999826 0.30901701 0.80901806 -116.28931 -0.30901806 -0.80901699 0.49999934 304.44993 0.80901767 -0.49999999 -0.30901526 188.15981 4 'point symmetry operation' ? ? 0.49999826 -0.30901805 0.80901766 0.00037 0.30901701 -0.80901700 -0.49999999 376.32045 0.80901807 0.49999935 -0.30901525 -0.00036 5 'point symmetry operation' ? ? 0.80901633 -0.50000107 0.30901700 71.87112 0.50000067 0.30901699 -0.80901658 188.16004 0.30901765 0.80901633 0.50000067 -116.28951 6 'point symmetry operation' ? ? 0.30901739 0.80901634 0.50000081 -116.28969 0.80901634 -0.50000096 0.30901715 71.87149 0.50000082 0.30901715 -0.80901643 188.15973 7 'point symmetry operation' ? ? -0.00000017 -0.00000025 1.00000000 -0.00012 1.00000000 -0.00000008 0.00000016 0.00041 0.00000008 1.00000000 0.00000025 -0.00029 8 'point symmetry operation' ? ? 0.30901699 -0.80901674 0.50000041 188.15991 0.80901643 0.50000051 0.30901766 -116.28911 -0.50000093 0.30901684 0.80901648 71.87085 9 'point symmetry operation' ? ? 0.80901766 -0.49999984 -0.30901551 188.15963 0.49999842 0.30901700 0.80901797 -116.28890 -0.30901782 -0.80901709 0.49999933 304.44968 10 'point symmetry operation' ? ? 0.80901791 0.49999959 -0.30901526 -0.00057 0.49999837 -0.30901790 0.80901765 0.00075 0.30901725 -0.80901690 -0.50000000 376.32016 11 'point symmetry operation' ? ? -0.80901857 -0.49999786 0.30901634 376.31975 -0.49999786 0.30901657 -0.80901848 376.31999 0.30901634 -0.80901849 -0.49999800 376.32025 12 'point symmetry operation' ? ? -0.30901847 -0.80901700 -0.49999907 492.60928 -0.80901551 0.50000147 -0.30901849 304.44894 0.50000149 0.30901458 -0.80901699 188.16019 13 'point symmetry operation' ? ? 0.00000017 -0.00000190 -1.00000000 376.32011 -1.00000000 0.00000174 -0.00000016 376.31971 0.00000174 1.00000000 -0.00000190 -0.00019 14 'point symmetry operation' ? ? -0.30901592 0.80901607 -0.50000215 188.15992 -0.80901725 -0.50000000 -0.30901633 492.60935 -0.50000025 0.30901941 0.80901592 71.87035 15 'point symmetry operation' ? ? -0.80901699 0.50000158 0.30901444 188.15970 -0.49999893 -0.30901834 -0.80901714 492.60952 -0.30901873 -0.80901551 0.50000134 304.44917 16 'point symmetry operation' ? ? -0.49999882 -0.30901848 -0.80901715 492.60911 -0.30901848 -0.80901560 0.50000133 304.44937 -0.80901716 0.50000133 0.30901443 188.15998 17 'point symmetry operation' ? ? -0.49999770 0.30901658 -0.80901857 376.31955 0.30901658 -0.80901839 -0.49999801 376.32041 -0.80901858 -0.49999800 0.30901608 376.32003 18 'point symmetry operation' ? ? -0.80901542 0.50000163 -0.30901847 304.44846 0.50000164 0.30901474 -0.80901684 188.16033 -0.30901848 -0.80901685 -0.49999932 492.60950 19 'point symmetry operation' ? ? -1.00000000 0.00000182 0.00000000 376.31924 0.00000182 1.00000000 -0.00000165 -0.00003 0.00000000 -0.00000166 -1.00000000 376.32029 20 'point symmetry operation' ? ? -0.80901724 -0.50000011 -0.30901618 492.60891 -0.50000011 0.30901924 0.80901607 71.87055 -0.30901618 0.80901607 -0.50000200 188.16014 21 'point symmetry operation' ? ? 0.80901608 -0.49999989 0.30901955 71.87047 -0.50000215 -0.30901608 0.80901602 188.16060 -0.30901591 -0.80901741 -0.50000000 492.60925 22 'point symmetry operation' ? ? 1.00000000 -0.00000182 0.00000215 -0.00006 -0.00000182 -1.00000000 0.00000000 376.32077 0.00000215 0.00000000 -1.00000000 376.31958 23 'point symmetry operation' ? ? 0.80901790 0.49999837 0.30901725 -116.28933 0.49999960 -0.30901791 -0.80901690 304.44988 -0.30901527 0.80901766 -0.50000000 188.15930 24 'point symmetry operation' ? ? 0.50000056 0.30901741 0.80901649 -116.28953 0.30901715 0.80901643 -0.50000082 71.87106 -0.80901659 0.50000065 0.30901700 188.15952 25 'point symmetry operation' ? ? 0.49999944 -0.30901550 0.80901791 -0.00038 -0.30901792 0.80901756 0.49999852 0.00033 -0.80901699 -0.50000001 0.30901699 376.31993 26 'point symmetry operation' ? ? 0.00000199 1.00000000 -0.00000174 -0.00047 0.00000025 -0.00000174 -1.00000000 376.32049 -1.00000000 0.00000199 -0.00000025 376.31945 27 'point symmetry operation' ? ? -0.50000000 0.30901939 0.80901608 71.87007 -0.30901593 0.80901617 -0.50000199 188.16030 -0.80901740 -0.49999986 -0.30901617 492.60910 28 'point symmetry operation' ? ? -0.30901847 -0.80901551 0.50000148 304.44890 -0.80901701 0.50000147 0.30901459 188.16012 -0.49999908 -0.30901850 -0.80901699 492.60933 29 'point symmetry operation' ? ? 0.30901660 -0.80901847 -0.49999785 376.31997 -0.80901848 -0.49999801 0.30901632 376.32019 -0.49999785 0.30901632 -0.80901858 376.31983 30 'point symmetry operation' ? ? 0.50000174 0.30901459 -0.80901683 188.15991 -0.30901832 -0.80901700 -0.49999918 492.60969 -0.80901542 0.50000148 -0.30901873 304.44874 31 'point symmetry operation' ? ? -0.30901807 -0.80901708 0.49999918 304.44955 0.80901757 -0.50000000 -0.30901550 188.16010 0.49999841 0.30901676 0.80901807 -116.28910 32 'point symmetry operation' ? ? 0.30901699 -0.80901690 -0.50000015 376.32004 0.80901792 0.49999949 -0.30901541 -0.00010 0.49999851 -0.30901806 0.80901751 0.00055 33 'point symmetry operation' ? ? 0.50000056 0.30901714 -0.80901659 188.15961 0.30901741 0.80901643 0.50000066 -116.28926 0.80901649 -0.50000082 0.30901699 71.87124 34 'point symmetry operation' ? ? -0.00000016 1.00000000 0.00000008 -0.00041 -0.00000025 -0.00000008 1.00000000 0.00029 1.00000000 0.00000017 0.00000025 0.00012 35 'point symmetry operation' ? ? -0.50000118 0.30901685 0.80901632 71.87073 0.30901684 -0.80901673 0.50000052 188.16034 0.80901633 0.50000052 0.30901791 -116.28937 36 'point symmetry operation' ? ? -0.50000000 0.30901698 -0.80901700 376.31962 -0.30901567 0.80901782 0.49999948 -0.00033 0.80901750 0.49999867 -0.30901782 0.00036 37 'point symmetry operation' ? ? -0.80901699 0.49999933 -0.30901808 304.44912 -0.50000016 -0.30901566 0.80901741 188.15989 0.30901674 0.80901792 0.49999866 -116.28926 38 'point symmetry operation' ? ? -1.00000000 0.00000000 -0.00000215 376.31999 0.00000000 -1.00000000 0.00000165 376.32012 -0.00000215 0.00000166 1.00000000 0.00009 39 'point symmetry operation' ? ? -0.80901700 -0.49999893 -0.30901872 492.60913 0.50000158 -0.30901833 -0.80901551 304.44933 0.30901444 -0.80901714 0.50000134 188.16049 40 'point symmetry operation' ? ? -0.50000000 -0.30901594 -0.80901740 492.60890 0.30901940 0.80901617 -0.49999985 71.87050 0.80901608 -0.50000200 -0.30901617 188.16066 41 'point symmetry operation' ? ? 0.80901608 -0.50000214 -0.30901591 188.16043 -0.49999990 -0.30901609 -0.80901741 492.60933 0.30901956 0.80901602 -0.50000000 71.87030 42 'point symmetry operation' ? ? 0.80901766 0.49999842 -0.30901781 0.00018 -0.49999984 0.30901699 -0.80901709 376.32003 -0.30901551 0.80901797 0.49999934 -0.00058 43 'point symmetry operation' ? ? 0.30901700 0.80901791 0.49999851 -116.28948 -0.80901690 0.49999949 -0.30901806 304.44949 -0.50000015 -0.30901541 0.80901751 188.15959 44 'point symmetry operation' ? ? -0.00000199 0.00000190 1.00000000 -0.00018 -1.00000000 0.00000008 -0.00000199 376.32037 -0.00000008 -1.00000000 0.00000190 376.31986 45 'point symmetry operation' ? ? 0.30901445 -0.80901698 0.50000159 188.16021 -0.80901699 -0.49999904 -0.30901857 492.60954 0.50000159 -0.30901858 -0.80901541 304.44913 46 'point symmetry operation' ? ? -0.30901807 0.80901756 0.49999841 -0.00005 -0.80901709 -0.50000000 0.30901675 376.32022 0.49999919 -0.30901549 0.80901807 -0.00016 47 'point symmetry operation' ? ? -0.50000230 -0.30901607 0.80901592 188.16022 -0.30901607 -0.80901726 -0.50000014 492.60950 0.80901593 -0.50000014 0.30901956 71.87074 48 'point symmetry operation' ? ? -0.00000199 -1.00000000 -0.00000008 376.32040 0.00000190 0.00000008 -1.00000000 376.31983 1.00000000 -0.00000199 0.00000190 0.00021 49 'point symmetry operation' ? ? 0.49999944 -0.30901792 -0.80901698 304.44951 -0.30901551 0.80901756 -0.50000001 188.15959 0.80901792 0.49999852 0.30901700 -116.28912 50 'point symmetry operation' ? ? 0.30901700 0.80901642 -0.50000092 71.87068 -0.80901674 0.50000051 0.30901684 188.15983 0.50000042 0.30901767 0.80901648 -116.28935 51 'point symmetry operation' ? ? -0.50000000 -0.30901567 0.80901750 188.15942 0.30901698 0.80901782 0.49999867 -116.28907 -0.80901700 0.49999948 -0.30901782 304.44924 52 'point symmetry operation' ? ? 0.00000016 -1.00000000 0.00000174 376.31965 -0.00000190 0.00000174 1.00000000 0.00026 -1.00000000 -0.00000017 -0.00000190 376.32017 53 'point symmetry operation' ? ? 0.50000174 -0.30901832 -0.80901541 304.44885 0.30901460 -0.80901699 0.50000148 188.16063 -0.80901684 -0.49999918 -0.30901874 492.60935 54 'point symmetry operation' ? ? 0.30901954 0.80901617 -0.49999975 71.87003 0.80901618 -0.50000199 -0.30901592 188.16081 -0.49999975 -0.30901593 -0.80901756 492.60908 55 'point symmetry operation' ? ? -0.30901552 0.80901781 0.49999959 -0.00080 0.80901765 0.49999853 -0.30901766 0.00055 -0.49999985 0.30901723 -0.80901699 376.31974 56 'point symmetry operation' ? ? 0.00000199 0.00000025 -1.00000000 376.31936 1.00000000 -0.00000174 0.00000199 0.00038 -0.00000174 -1.00000000 -0.00000025 376.32058 57 'point symmetry operation' ? ? -0.30901552 0.80901764 -0.49999985 188.15912 0.80901782 0.49999853 0.30901724 -116.28892 0.49999959 -0.30901767 -0.80901700 304.44963 58 'point symmetry operation' ? ? -0.80901675 0.50000040 0.30901698 188.15940 0.50000041 0.30901742 0.80901658 -116.28909 0.30901699 0.80901658 -0.50000068 71.87081 59 'point symmetry operation' ? ? -0.80901700 -0.50000016 0.30901674 376.31981 0.49999933 -0.30901565 0.80901792 0.00009 -0.30901808 0.80901741 0.49999866 0.00013 60 'point symmetry operation' ? ? -0.30901592 -0.80901725 -0.50000025 492.60906 0.80901608 -0.50000000 0.30901940 71.87094 -0.50000216 -0.30901632 0.80901592 188.16044 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 5 ? ALA A 9 ? LYS A 5 ALA A 9 5 ? 5 HELX_P HELX_P2 AA2 THR A 12 ? LEU A 31 ? THR A 12 LEU A 31 1 ? 20 HELX_P HELX_P3 AA3 TYR A 32 ? PHE A 36 ? TYR A 32 PHE A 36 5 ? 5 HELX_P HELX_P4 AA4 LEU A 86 ? ASP A 90 ? LEU A 86 ASP A 90 1 ? 5 HELX_P HELX_P5 AA5 ASN A 91 ? GLU A 93 ? ASN A 91 GLU A 93 5 ? 3 HELX_P HELX_P6 AA6 LEU A 101 ? GLY A 122 ? LEU A 101 GLY A 122 1 ? 22 HELX_P HELX_P7 AA7 GLY A 130 ? PHE A 134 ? GLY A 130 PHE A 134 5 ? 5 HELX_P HELX_P8 AA8 THR A 144 ? ASP A 162 ? THR A 144 ASP A 162 1 ? 19 HELX_P HELX_P9 AA9 THR A 174 ? GLU A 184 ? THR A 174 GLU A 184 1 ? 11 HELX_P HELX_P10 AB1 PRO A 189 ? LEU A 198 ? PRO A 189 LEU A 198 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASP A 38 ? GLU A 40 ? ASP A 38 GLU A 40 AA1 2 PHE A 222 ? ARG A 237 ? PHE A 222 ARG A 237 AA1 3 ALA A 241 ? VAL A 254 ? ALA A 241 VAL A 254 AA1 4 ILE A 76 ? ASP A 85 ? ILE A 76 ASP A 85 AA2 1 ALA A 49 ? VAL A 57 ? ALA A 49 VAL A 57 AA2 2 GLY A 68 ? PRO A 74 ? GLY A 68 PRO A 74 AA3 1 LYS A 138 ? GLU A 140 ? LYS A 138 GLU A 140 AA3 2 LEU A 260 ? LYS A 264 ? LEU A 260 LYS A 264 AA3 3 ALA A 212 ? SER A 216 ? ALA A 212 SER A 216 AA3 4 TYR A 168 ? ILE A 172 ? TYR A 168 ILE A 172 AA3 5 LYS A 202 ? THR A 205 ? LYS A 202 THR A 205 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 40 ? N GLU A 40 O LEU A 224 ? O LEU A 224 AA1 2 3 N LYS A 223 ? N LYS A 223 O GLN A 253 ? O GLN A 253 AA1 3 4 O LEU A 244 ? O LEU A 244 N PHE A 82 ? N PHE A 82 AA2 1 2 N LEU A 52 ? N LEU A 52 O LYS A 71 ? O LYS A 71 AA3 1 2 N ILE A 139 ? N ILE A 139 O LYS A 264 ? O LYS A 264 AA3 2 3 O ILE A 261 ? O ILE A 261 N VAL A 214 ? N VAL A 214 AA3 3 4 O LEU A 213 ? O LEU A 213 N VAL A 171 ? N VAL A 171 AA3 4 5 N ILE A 172 ? N ILE A 172 O ILE A 204 ? O ILE A 204 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id RBF _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'binding site for residue RBF A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 TRP A 87 ? TRP A 87 . ? 1_555 ? 2 AC1 3 ASP A 90 ? ASP A 90 . ? 1_555 ? 3 AC1 3 ARG A 94 ? ARG A 94 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 36 ? ? -141.35 25.48 2 1 ASN A 173 ? ? -68.01 -177.80 3 1 ARG A 187 ? ? -78.20 -165.02 4 1 ASP A 236 ? ? -165.63 -169.70 5 1 LYS A 239 ? ? 67.27 -21.53 6 1 ASP A 240 ? ? -151.83 3.69 7 1 VAL A 255 ? ? -103.14 -60.53 # _pdbx_point_symmetry.entry_id 7LIK _pdbx_point_symmetry.Schoenflies_symbol I # _pdbx_entry_details.entry_id 7LIK _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.entry_id 7LIK _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value 27.84 _em_3d_fitting.ref_protocol 'FLEXIBLE FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id A _em_3d_fitting_list.pdb_chain_residue_range 1-265 _em_3d_fitting_list.pdb_entry_id 3DKT _em_3d_fitting_list.initial_refinement_model_id 1 _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 3DKT # _em_3d_reconstruction.entry_id 7LIK _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 75829 _em_3d_reconstruction.resolution 2.91 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 8.0 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details 'Thermotoga maratima encapsulin pore mutant with H187R mutation' _em_entity_assembly.name 'Thermotoga maratima Pore Mutant S1R' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 7LIK _em_image_scans.id 1 _em_image_scans.dimension_height 3710 _em_image_scans.dimension_width 3838 _em_image_scans.frames_per_image 40 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image ? _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 7LIK _em_imaging.accelerating_voltage 200 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 70 _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'TFS GLACIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max -1800 _em_imaging.nominal_defocus_min -1300 _em_imaging.nominal_magnification 45000 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details '60 seconds at 5 mA' _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.method ? _em_sample_support.film_material ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 295 _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'blot 4 seconds, force 20 immediately prior to plunging into ethane' _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 7LIK _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 7LIK _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 7LIK _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry I # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 RBF N1 N N N 287 RBF C2 C N N 288 RBF O2 O N N 289 RBF N3 N N N 290 RBF C4 C N N 291 RBF O4 O N N 292 RBF C4A C N N 293 RBF N5 N N N 294 RBF C5A C Y N 295 RBF C6 C Y N 296 RBF C7 C Y N 297 RBF C7M C N N 298 RBF C8 C Y N 299 RBF C8M C N N 300 RBF C9 C Y N 301 RBF C9A C Y N 302 RBF N10 N N N 303 RBF C10 C N N 304 RBF "C1'" C N N 305 RBF "C2'" C N S 306 RBF "O2'" O N N 307 RBF "C3'" C N S 308 RBF "O3'" O N N 309 RBF "C4'" C N R 310 RBF "O4'" O N N 311 RBF "C5'" C N N 312 RBF "O5'" O N N 313 RBF HN3 H N N 314 RBF HC6 H N N 315 RBF HC71 H N N 316 RBF HC72 H N N 317 RBF HC73 H N N 318 RBF HC81 H N N 319 RBF HC82 H N N 320 RBF HC83 H N N 321 RBF HC9 H N N 322 RBF HC11 H N N 323 RBF HC12 H N N 324 RBF "HC2'" H N N 325 RBF "HO2'" H N N 326 RBF "HC3'" H N N 327 RBF "HO3'" H N N 328 RBF "HC4'" H N N 329 RBF "HO4'" H N N 330 RBF HC51 H N N 331 RBF HC52 H N N 332 RBF "HO5'" H N N 333 SER N N N N 334 SER CA C N S 335 SER C C N N 336 SER O O N N 337 SER CB C N N 338 SER OG O N N 339 SER OXT O N N 340 SER H H N N 341 SER H2 H N N 342 SER HA H N N 343 SER HB2 H N N 344 SER HB3 H N N 345 SER HG H N N 346 SER HXT H N N 347 THR N N N N 348 THR CA C N S 349 THR C C N N 350 THR O O N N 351 THR CB C N R 352 THR OG1 O N N 353 THR CG2 C N N 354 THR OXT O N N 355 THR H H N N 356 THR H2 H N N 357 THR HA H N N 358 THR HB H N N 359 THR HG1 H N N 360 THR HG21 H N N 361 THR HG22 H N N 362 THR HG23 H N N 363 THR HXT H N N 364 TRP N N N N 365 TRP CA C N S 366 TRP C C N N 367 TRP O O N N 368 TRP CB C N N 369 TRP CG C Y N 370 TRP CD1 C Y N 371 TRP CD2 C Y N 372 TRP NE1 N Y N 373 TRP CE2 C Y N 374 TRP CE3 C Y N 375 TRP CZ2 C Y N 376 TRP CZ3 C Y N 377 TRP CH2 C Y N 378 TRP OXT O N N 379 TRP H H N N 380 TRP H2 H N N 381 TRP HA H N N 382 TRP HB2 H N N 383 TRP HB3 H N N 384 TRP HD1 H N N 385 TRP HE1 H N N 386 TRP HE3 H N N 387 TRP HZ2 H N N 388 TRP HZ3 H N N 389 TRP HH2 H N N 390 TRP HXT H N N 391 TYR N N N N 392 TYR CA C N S 393 TYR C C N N 394 TYR O O N N 395 TYR CB C N N 396 TYR CG C Y N 397 TYR CD1 C Y N 398 TYR CD2 C Y N 399 TYR CE1 C Y N 400 TYR CE2 C Y N 401 TYR CZ C Y N 402 TYR OH O N N 403 TYR OXT O N N 404 TYR H H N N 405 TYR H2 H N N 406 TYR HA H N N 407 TYR HB2 H N N 408 TYR HB3 H N N 409 TYR HD1 H N N 410 TYR HD2 H N N 411 TYR HE1 H N N 412 TYR HE2 H N N 413 TYR HH H N N 414 TYR HXT H N N 415 VAL N N N N 416 VAL CA C N S 417 VAL C C N N 418 VAL O O N N 419 VAL CB C N N 420 VAL CG1 C N N 421 VAL CG2 C N N 422 VAL OXT O N N 423 VAL H H N N 424 VAL H2 H N N 425 VAL HA H N N 426 VAL HB H N N 427 VAL HG11 H N N 428 VAL HG12 H N N 429 VAL HG13 H N N 430 VAL HG21 H N N 431 VAL HG22 H N N 432 VAL HG23 H N N 433 VAL HXT H N N 434 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 RBF N1 C2 sing N N 275 RBF N1 C10 doub N N 276 RBF C2 O2 doub N N 277 RBF C2 N3 sing N N 278 RBF N3 C4 sing N N 279 RBF N3 HN3 sing N N 280 RBF C4 O4 doub N N 281 RBF C4 C4A sing N N 282 RBF C4A N5 doub N N 283 RBF C4A C10 sing N N 284 RBF N5 C5A sing N N 285 RBF C5A C6 doub Y N 286 RBF C5A C9A sing Y N 287 RBF C6 C7 sing Y N 288 RBF C6 HC6 sing N N 289 RBF C7 C7M sing N N 290 RBF C7 C8 doub Y N 291 RBF C7M HC71 sing N N 292 RBF C7M HC72 sing N N 293 RBF C7M HC73 sing N N 294 RBF C8 C8M sing N N 295 RBF C8 C9 sing Y N 296 RBF C8M HC81 sing N N 297 RBF C8M HC82 sing N N 298 RBF C8M HC83 sing N N 299 RBF C9 C9A doub Y N 300 RBF C9 HC9 sing N N 301 RBF C9A N10 sing N N 302 RBF N10 C10 sing N N 303 RBF N10 "C1'" sing N N 304 RBF "C1'" "C2'" sing N N 305 RBF "C1'" HC11 sing N N 306 RBF "C1'" HC12 sing N N 307 RBF "C2'" "O2'" sing N N 308 RBF "C2'" "C3'" sing N N 309 RBF "C2'" "HC2'" sing N N 310 RBF "O2'" "HO2'" sing N N 311 RBF "C3'" "O3'" sing N N 312 RBF "C3'" "C4'" sing N N 313 RBF "C3'" "HC3'" sing N N 314 RBF "O3'" "HO3'" sing N N 315 RBF "C4'" "O4'" sing N N 316 RBF "C4'" "C5'" sing N N 317 RBF "C4'" "HC4'" sing N N 318 RBF "O4'" "HO4'" sing N N 319 RBF "C5'" "O5'" sing N N 320 RBF "C5'" HC51 sing N N 321 RBF "C5'" HC52 sing N N 322 RBF "O5'" "HO5'" sing N N 323 SER N CA sing N N 324 SER N H sing N N 325 SER N H2 sing N N 326 SER CA C sing N N 327 SER CA CB sing N N 328 SER CA HA sing N N 329 SER C O doub N N 330 SER C OXT sing N N 331 SER CB OG sing N N 332 SER CB HB2 sing N N 333 SER CB HB3 sing N N 334 SER OG HG sing N N 335 SER OXT HXT sing N N 336 THR N CA sing N N 337 THR N H sing N N 338 THR N H2 sing N N 339 THR CA C sing N N 340 THR CA CB sing N N 341 THR CA HA sing N N 342 THR C O doub N N 343 THR C OXT sing N N 344 THR CB OG1 sing N N 345 THR CB CG2 sing N N 346 THR CB HB sing N N 347 THR OG1 HG1 sing N N 348 THR CG2 HG21 sing N N 349 THR CG2 HG22 sing N N 350 THR CG2 HG23 sing N N 351 THR OXT HXT sing N N 352 TRP N CA sing N N 353 TRP N H sing N N 354 TRP N H2 sing N N 355 TRP CA C sing N N 356 TRP CA CB sing N N 357 TRP CA HA sing N N 358 TRP C O doub N N 359 TRP C OXT sing N N 360 TRP CB CG sing N N 361 TRP CB HB2 sing N N 362 TRP CB HB3 sing N N 363 TRP CG CD1 doub Y N 364 TRP CG CD2 sing Y N 365 TRP CD1 NE1 sing Y N 366 TRP CD1 HD1 sing N N 367 TRP CD2 CE2 doub Y N 368 TRP CD2 CE3 sing Y N 369 TRP NE1 CE2 sing Y N 370 TRP NE1 HE1 sing N N 371 TRP CE2 CZ2 sing Y N 372 TRP CE3 CZ3 doub Y N 373 TRP CE3 HE3 sing N N 374 TRP CZ2 CH2 doub Y N 375 TRP CZ2 HZ2 sing N N 376 TRP CZ3 CH2 sing Y N 377 TRP CZ3 HZ3 sing N N 378 TRP CH2 HH2 sing N N 379 TRP OXT HXT sing N N 380 TYR N CA sing N N 381 TYR N H sing N N 382 TYR N H2 sing N N 383 TYR CA C sing N N 384 TYR CA CB sing N N 385 TYR CA HA sing N N 386 TYR C O doub N N 387 TYR C OXT sing N N 388 TYR CB CG sing N N 389 TYR CB HB2 sing N N 390 TYR CB HB3 sing N N 391 TYR CG CD1 doub Y N 392 TYR CG CD2 sing Y N 393 TYR CD1 CE1 sing Y N 394 TYR CD1 HD1 sing N N 395 TYR CD2 CE2 doub Y N 396 TYR CD2 HD2 sing N N 397 TYR CE1 CZ doub Y N 398 TYR CE1 HE1 sing N N 399 TYR CE2 CZ sing Y N 400 TYR CE2 HE2 sing N N 401 TYR CZ OH sing N N 402 TYR OH HH sing N N 403 TYR OXT HXT sing N N 404 VAL N CA sing N N 405 VAL N H sing N N 406 VAL N H2 sing N N 407 VAL CA C sing N N 408 VAL CA CB sing N N 409 VAL CA HA sing N N 410 VAL C O doub N N 411 VAL C OXT sing N N 412 VAL CB CG1 sing N N 413 VAL CB CG2 sing N N 414 VAL CB HB sing N N 415 VAL CG1 HG11 sing N N 416 VAL CG1 HG12 sing N N 417 VAL CG1 HG13 sing N N 418 VAL CG2 HG21 sing N N 419 VAL CG2 HG22 sing N N 420 VAL CG2 HG23 sing N N 421 VAL OXT HXT sing N N 422 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 150 mM NaCl 'Sodium Chloride' 1 2 25 mM C4H11NO3 Tris # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 1.852395 # _em_entity_assembly_naturalsource.id 1 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 243274 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Thermotoga maritima MSB8' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 1 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 62 _em_image_recording.average_exposure_time 8 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? cryoSPARC 2.15.0 1 ? ? 2 'IMAGE ACQUISITION' ? Leginon ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? cryoSPARC 2.15.0 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? 'UCSF Chimera' ? ? 1 ? 8 'MODEL FITTING' ? Coot 0.9 ? 1 ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? cryoSPARC 2.15.0 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? cryoSPARC 2.15.0 1 ? ? 12 CLASSIFICATION ? ? ? 1 ? ? 13 RECONSTRUCTION ? cryoSPARC 2.15.0 1 ? ? 14 'MODEL REFINEMENT' ? PHENIX 1.18.2-3874-000 ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 2.0 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Australian Research Council (ARC)' Australia DE190100624 1 'Other private' Australia WRF2020 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R35GM133325 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3DKT # _atom_sites.entry_id 7LIK _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_