HEADER LYASE/LYASE INHIBITOR 02-FEB-21 7LKL
TITLE THE INTERNAL ALDIMINE FORM OF THE WILD-TYPE SALMONELLA TYPHIMURIUM
TITLE 2 TRYPTOPHAN SYNTHASE IN COMPLEX WITH INHIBITOR N-(4'-
TITLE 3 TRIFLUOROMETHOXYBENZENESULFONYL)-2-AMINO-1-ETHYLPHOSPHATE (F9F) AT
TITLE 4 THE ENZYME ALPHA-SITE, CESIUM ION AT THE METAL COORDINATION SITE AND
TITLE 5 THE PRODUCT L-TRYPTOPHAN AT THE ENZYME BETA-SITE AT 1.05 ANGSTROM
TITLE 6 RESOLUTION. ONE OF THE BETA-Q114 ROTAMER CONFORMATIONS ALLOWS A
TITLE 7 HYDROGEN BOND TO FORM WITH THE PLP OXYGEN AT THE POSITION 3 IN THE
TITLE 8 RING
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: TRYPTOPHAN SYNTHASE ALPHA CHAIN;
COMPND 3 CHAIN: A;
COMPND 4 EC: 4.2.1.20;
COMPND 5 ENGINEERED: YES;
COMPND 6 MOL_ID: 2;
COMPND 7 MOLECULE: TRYPTOPHAN SYNTHASE BETA CHAIN;
COMPND 8 CHAIN: B;
COMPND 9 EC: 4.2.1.20;
COMPND 10 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR
SOURCE 3 TYPHIMURIUM;
SOURCE 4 ORGANISM_TAXID: 90371;
SOURCE 5 GENE: TRPA, DD95_04145;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: CB149;
SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBR322;
SOURCE 10 MOL_ID: 2;
SOURCE 11 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR
SOURCE 12 TYPHIMURIUM;
SOURCE 13 ORGANISM_TAXID: 90371;
SOURCE 14 GENE: TRPB;
SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 17 EXPRESSION_SYSTEM_STRAIN: CB149;
SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PEBA-10
KEYWDS INHIBITOR, LYASE, LYASE-LYASE INHIBITOR COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR E.HILARIO,M.F.DUNN,L.J.MUELLER
REVDAT 2 18-OCT-23 7LKL 1 REMARK
REVDAT 1 02-FEB-22 7LKL 0
JRNL AUTH E.HILARIO,M.F.DUNN,L.J.MUELLER
JRNL TITL THE INTERNAL ALDIMINE FORM OF THE WILD-TYPE SALMONELLA
JRNL TITL 2 TYPHIMURIUM TRYPTOPHAN SYNTHASE IN COMPLEX WITH INHIBITOR
JRNL TITL 3 N-(4'-TRIFLUOROMETHOXYBENZENESULFONYL)
JRNL TITL 4 -2-AMINO-1-ETHYLPHOSPHATE (F9F) AT THE ENZYME ALPHA-SITE,
JRNL TITL 5 CESIUM ION AT THE METAL COORDINATION SITE AND THE PRODUCT
JRNL TITL 6 L-TRYPTOPHAN AT THE ENZYME BETA-SITE AT 1.05 ANGSTROM
JRNL TITL 7 RESOLUTION. ONE OF THE BETA-Q114 ROTAMER CONFORMATIONS
JRNL TITL 8 ALLOWS A HYDROGEN BOND TO FORM WITH THE PLP OXYGEN AT THE
JRNL TITL 9 POSITION 3 IN THE RING.
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 1.05 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.8.0258
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.05
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.92
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 93.6
REMARK 3 NUMBER OF REFLECTIONS : 297211
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.156
REMARK 3 R VALUE (WORKING SET) : 0.155
REMARK 3 FREE R VALUE : 0.176
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 15524
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.05
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.08
REMARK 3 REFLECTION IN BIN (WORKING SET) : 20922
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.83
REMARK 3 BIN R VALUE (WORKING SET) : 0.2700
REMARK 3 BIN FREE R VALUE SET COUNT : 1102
REMARK 3 BIN FREE R VALUE : 0.2680
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 4968
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 185
REMARK 3 SOLVENT ATOMS : 840
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.92
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -1.10000
REMARK 3 B22 (A**2) : 2.05000
REMARK 3 B33 (A**2) : -0.81000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : -0.75000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.027
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.028
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.026
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.239
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.966
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5521 ; 0.008 ; 0.013
REMARK 3 BOND LENGTHS OTHERS (A): 5169 ; 0.001 ; 0.017
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7492 ; 1.486 ; 1.639
REMARK 3 BOND ANGLES OTHERS (DEGREES): 11977 ; 1.523 ; 1.569
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 725 ; 6.275 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 264 ;33.189 ;22.311
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 884 ;11.869 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;16.967 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 706 ; 0.080 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6352 ; 0.007 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 1125 ; 0.002 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): 10690 ; 1.255 ; 3.000
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY
REMARK 4
REMARK 4 7LKL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-21.
REMARK 100 THE DEPOSITION ID IS D_1000254596.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 25-SEP-20
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.6-8.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ALS
REMARK 200 BEAMLINE : 12.3.1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.88558
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 0.5.902
REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 312765
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.050
REMARK 200 RESOLUTION RANGE LOW (A) : 90.571
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9
REMARK 200 DATA REDUNDANCY : 3.800
REMARK 200 R MERGE (I) : 0.11500
REMARK 200 R SYM (I) : 0.11500
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 4.5000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.05
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.11
REMARK 200 COMPLETENESS FOR SHELL (%) : 91.5
REMARK 200 DATA REDUNDANCY IN SHELL : 3.90
REMARK 200 R MERGE FOR SHELL (I) : 1.03100
REMARK 200 R SYM FOR SHELL (I) : 1.03100
REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.400
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: MOLREP 11.7.02, DM 7.0.078
REMARK 200 STARTING MODEL: 5CGQ
REMARK 200
REMARK 200 REMARK: LARGE PLATE-LIKE CRYSTAL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 51.88
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM BICINE-CSOH, 10% PEG 8,000, 2 MM
REMARK 280 SPERMINE, PH 7.8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 90.87050
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.90500
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 90.87050
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 29.90500
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 22220 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 45160 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -315.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET B 1
REMARK 465 GLY B 395
REMARK 465 GLU B 396
REMARK 465 ILE B 397
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 ARG A 15 CG CD NE CZ NH1 NH2
REMARK 470 LEU A 191 CG CD1 CD2
REMARK 470 LYS A 243 CG CD CE NZ
REMARK 470 LYS A 249 CG CD CE NZ
REMARK 470 LYS B 129 CD CE NZ
REMARK 470 GLU B 140 CG CD OE1 OE2
REMARK 470 LYS B 392 CG CD CE NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 PHE A 212 120.94 102.04
REMARK 500 ALA B 269 62.08 -118.94
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A 762 DISTANCE = 5.82 ANGSTROMS
REMARK 525 HOH A 763 DISTANCE = 5.86 ANGSTROMS
REMARK 525 HOH A 764 DISTANCE = 6.22 ANGSTROMS
REMARK 525 HOH A 765 DISTANCE = 6.99 ANGSTROMS
REMARK 525 HOH B1072 DISTANCE = 5.81 ANGSTROMS
REMARK 525 HOH B1073 DISTANCE = 5.84 ANGSTROMS
REMARK 525 HOH B1074 DISTANCE = 6.59 ANGSTROMS
REMARK 525 HOH B1075 DISTANCE = 7.16 ANGSTROMS
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS A 310 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ALA A 167 O
REMARK 620 2 GLY A 170 O 86.3
REMARK 620 3 HIS A 204 O 78.3 152.6
REMARK 620 4 HOH A 518 O 56.1 59.1 93.6
REMARK 620 5 HOH A 611 O 61.6 135.9 53.1 113.9
REMARK 620 6 HOH A 672 O 156.8 99.2 103.9 144.9 100.9
REMARK 620 7 HOH A 704 O 150.3 82.6 99.8 94.8 139.7 52.7
REMARK 620 N 1 2 3 4 5 6
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS A 310 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ALA A 167 O
REMARK 620 2 SER A 168 O 70.4
REMARK 620 3 GLY A 170 O 85.7 78.4
REMARK 620 4 HOH A 610 O 108.7 54.5 118.6
REMARK 620 5 HOH A 611 O 65.3 94.4 150.8 76.8
REMARK 620 6 HOH A 672 O 150.9 138.6 97.2 95.3 106.3
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS A 311 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ALA A 265 O
REMARK 620 2 ARG A 267 O 86.3
REMARK 620 3 HOH A 525 O 94.0 117.0
REMARK 620 4 HOH A 547 O 70.9 68.5 164.0
REMARK 620 5 LYS B 99 O 66.4 138.2 40.7 124.6
REMARK 620 6 HOH B 935 O 166.9 106.7 78.4 115.3 101.5
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS A 311 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ARG A 267 O
REMARK 620 2 LYS B 99 O 114.6
REMARK 620 3 HOH B 935 O 110.5 77.7
REMARK 620 N 1 2
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS B 523 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 THR B 66 O
REMARK 620 2 THR B 66 OG1 59.5
REMARK 620 3 THR B 69 O 73.5 126.4
REMARK 620 4 THR B 71 O 87.1 64.7 90.2
REMARK 620 5 HOH B 738 O 81.3 59.5 139.0 120.8
REMARK 620 6 HOH B 810 O 77.2 116.7 72.1 158.9 71.1
REMARK 620 7 HOH B 959 O 139.1 137.8 68.9 77.5 138.9 105.3
REMARK 620 N 1 2 3 4 5 6
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS B 521 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP B 225 O
REMARK 620 2 SER B 249 O 77.4
REMARK 620 3 HOH B 732 O 83.2 59.8
REMARK 620 4 HOH B1011 O 101.1 110.0 168.2
REMARK 620 N 1 2 3
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS B 522 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 VAL B 231 O
REMARK 620 2 GLY B 232 O 69.7
REMARK 620 3 GLU B 256 OE2 107.8 161.0
REMARK 620 4 GLY B 268 O 97.1 124.0 74.7
REMARK 620 5 SER B 308 O 133.7 64.3 113.9 112.4
REMARK 620 N 1 2 3 4
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 CS B 522 CS
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLY B 232 O
REMARK 620 2 GLY B 268 O 155.4
REMARK 620 3 LEU B 304 O 92.2 89.0
REMARK 620 4 PHE B 306 O 112.5 92.0 83.3
REMARK 620 5 SER B 308 O 69.8 121.7 141.1 73.3
REMARK 620 N 1 2 3 4
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 5CGQ RELATED DB: PDB
REMARK 900 INTERNAL ALDIMINE WITH L-TRP AT THE BETA-SITE
DBREF1 7LKL A 1 268 UNP A0A0D6FWC1_SALTM
DBREF2 7LKL A A0A0D6FWC1 1 268
DBREF 7LKL B 1 397 UNP P0A2K1 TRPB_SALTY 1 397
SEQRES 1 A 268 MET GLU ARG TYR GLU ASN LEU PHE ALA GLN LEU ASN ASP
SEQRES 2 A 268 ARG ARG GLU GLY ALA PHE VAL PRO PHE VAL THR LEU GLY
SEQRES 3 A 268 ASP PRO GLY ILE GLU GLN SER LEU LYS ILE ILE ASP THR
SEQRES 4 A 268 LEU ILE ASP ALA GLY ALA ASP ALA LEU GLU LEU GLY VAL
SEQRES 5 A 268 PRO PHE SER ASP PRO LEU ALA ASP GLY PRO THR ILE GLN
SEQRES 6 A 268 ASN ALA ASN LEU ARG ALA PHE ALA ALA GLY VAL THR PRO
SEQRES 7 A 268 ALA GLN CYS PHE GLU MET LEU ALA LEU ILE ARG GLU LYS
SEQRES 8 A 268 HIS PRO THR ILE PRO ILE GLY LEU LEU MET TYR ALA ASN
SEQRES 9 A 268 LEU VAL PHE ASN ASN GLY ILE ASP ALA PHE TYR ALA ARG
SEQRES 10 A 268 CYS GLU GLN VAL GLY VAL ASP SER VAL LEU VAL ALA ASP
SEQRES 11 A 268 VAL PRO VAL GLU GLU SER ALA PRO PHE ARG GLN ALA ALA
SEQRES 12 A 268 LEU ARG HIS ASN ILE ALA PRO ILE PHE ILE CYS PRO PRO
SEQRES 13 A 268 ASN ALA ASP ASP ASP LEU LEU ARG GLN VAL ALA SER TYR
SEQRES 14 A 268 GLY ARG GLY TYR THR TYR LEU LEU SER ARG SER GLY VAL
SEQRES 15 A 268 THR GLY ALA GLU ASN ARG GLY ALA LEU PRO LEU HIS HIS
SEQRES 16 A 268 LEU ILE GLU LYS LEU LYS GLU TYR HIS ALA ALA PRO ALA
SEQRES 17 A 268 LEU GLN GLY PHE GLY ILE SER SER PRO GLU GLN VAL SER
SEQRES 18 A 268 ALA ALA VAL ARG ALA GLY ALA ALA GLY ALA ILE SER GLY
SEQRES 19 A 268 SER ALA ILE VAL LYS ILE ILE GLU LYS ASN LEU ALA SER
SEQRES 20 A 268 PRO LYS GLN MET LEU ALA GLU LEU ARG SER PHE VAL SER
SEQRES 21 A 268 ALA MET LYS ALA ALA SER ARG ALA
SEQRES 1 B 397 MET THR THR LEU LEU ASN PRO TYR PHE GLY GLU PHE GLY
SEQRES 2 B 397 GLY MET TYR VAL PRO GLN ILE LEU MET PRO ALA LEU ASN
SEQRES 3 B 397 GLN LEU GLU GLU ALA PHE VAL SER ALA GLN LYS ASP PRO
SEQRES 4 B 397 GLU PHE GLN ALA GLN PHE ALA ASP LEU LEU LYS ASN TYR
SEQRES 5 B 397 ALA GLY ARG PRO THR ALA LEU THR LYS CYS GLN ASN ILE
SEQRES 6 B 397 THR ALA GLY THR ARG THR THR LEU TYR LEU LYS ARG GLU
SEQRES 7 B 397 ASP LEU LEU HIS GLY GLY ALA HIS LYS THR ASN GLN VAL
SEQRES 8 B 397 LEU GLY GLN ALA LEU LEU ALA LYS ARG MET GLY LYS SER
SEQRES 9 B 397 GLU ILE ILE ALA GLU THR GLY ALA GLY GLN HIS GLY VAL
SEQRES 10 B 397 ALA SER ALA LEU ALA SER ALA LEU LEU GLY LEU LYS CYS
SEQRES 11 B 397 ARG ILE TYR MET GLY ALA LYS ASP VAL GLU ARG GLN SER
SEQRES 12 B 397 PRO ASN VAL PHE ARG MET ARG LEU MET GLY ALA GLU VAL
SEQRES 13 B 397 ILE PRO VAL HIS SER GLY SER ALA THR LEU LYS ASP ALA
SEQRES 14 B 397 CYS ASN GLU ALA LEU ARG ASP TRP SER GLY SER TYR GLU
SEQRES 15 B 397 THR ALA HIS TYR MET LEU GLY THR ALA ALA GLY PRO HIS
SEQRES 16 B 397 PRO TYR PRO THR ILE VAL ARG GLU PHE GLN ARG MET ILE
SEQRES 17 B 397 GLY GLU GLU THR LYS ALA GLN ILE LEU ASP LYS GLU GLY
SEQRES 18 B 397 ARG LEU PRO ASP ALA VAL ILE ALA CYS VAL GLY GLY GLY
SEQRES 19 B 397 SER ASN ALA ILE GLY MET PHE ALA ASP PHE ILE ASN ASP
SEQRES 20 B 397 THR SER VAL GLY LEU ILE GLY VAL GLU PRO GLY GLY HIS
SEQRES 21 B 397 GLY ILE GLU THR GLY GLU HIS GLY ALA PRO LEU LYS HIS
SEQRES 22 B 397 GLY ARG VAL GLY ILE TYR PHE GLY MET LYS ALA PRO MET
SEQRES 23 B 397 MET GLN THR ALA ASP GLY GLN ILE GLU GLU SER TYR SER
SEQRES 24 B 397 ILE SER ALA GLY LEU ASP PHE PRO SER VAL GLY PRO GLN
SEQRES 25 B 397 HIS ALA TYR LEU ASN SER ILE GLY ARG ALA ASP TYR VAL
SEQRES 26 B 397 SER ILE THR ASP ASP GLU ALA LEU GLU ALA PHE LYS THR
SEQRES 27 B 397 LEU CYS ARG HIS GLU GLY ILE ILE PRO ALA LEU GLU SER
SEQRES 28 B 397 SER HIS ALA LEU ALA HIS ALA LEU LYS MET MET ARG GLU
SEQRES 29 B 397 GLN PRO GLU LYS GLU GLN LEU LEU VAL VAL ASN LEU SER
SEQRES 30 B 397 GLY ARG GLY ASP LYS ASP ILE PHE THR VAL HIS ASP ILE
SEQRES 31 B 397 LEU LYS ALA ARG GLY GLU ILE
HET F9F A 301 22
HET DMS A 302 4
HET TRP A 303 15
HET DMS A 304 4
HET DMS A 305 4
HET DMS A 306 4
HET DMS A 307 4
HET EDO A 308 4
HET DMS A 309 4
HET CS A 310 2
HET CS A 311 2
HET CL A 312 1
HET TRP B 501 15
HET DMS B 502 4
HET DMS B 503 4
HET DMS B 504 4
HET PEG B 505 7
HET EDO B 506 4
HET EDO B 507 4
HET DMS B 508 4
HET EDO B 509 4
HET DMS B 510 4
HET PEG B 511 7
HET EDO B 512 4
HET PEG B 513 7
HET DMS B 514 4
HET DMS B 515 4
HET EDO B 516 4
HET EDO B 517 4
HET EDO B 518 4
HET EDO B 519 4
HET PLP B 520 15
HET CS B 521 1
HET CS B 522 2
HET CS B 523 1
HET CL B 524 1
HET CL B 525 1
HET CL B 526 1
HETNAM F9F 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL
HETNAM 2 F9F DIHYDROGEN PHOSPHATE
HETNAM DMS DIMETHYL SULFOXIDE
HETNAM TRP TRYPTOPHAN
HETNAM EDO 1,2-ETHANEDIOL
HETNAM CS CESIUM ION
HETNAM CL CHLORIDE ION
HETNAM PEG DI(HYDROXYETHYL)ETHER
HETNAM PLP PYRIDOXAL-5'-PHOSPHATE
HETSYN F9F N-(4'-TRIFLUOROMETHOXYBENZENESULFONYL)-2-AMINO-1-
HETSYN 2 F9F ETHYLPHOSPHATE, F9
HETSYN EDO ETHYLENE GLYCOL
HETSYN PLP VITAMIN B6 PHOSPHATE
FORMUL 3 F9F C9 H11 F3 N O7 P S
FORMUL 4 DMS 13(C2 H6 O S)
FORMUL 5 TRP 2(C11 H12 N2 O2)
FORMUL 10 EDO 9(C2 H6 O2)
FORMUL 12 CS 5(CS 1+)
FORMUL 14 CL 4(CL 1-)
FORMUL 19 PEG 3(C4 H10 O3)
FORMUL 34 PLP C8 H10 N O6 P
FORMUL 41 HOH *840(H2 O)
HELIX 1 AA1 GLU A 2 ARG A 14 1 13
HELIX 2 AA2 GLY A 29 ALA A 43 1 15
HELIX 3 AA3 GLY A 61 ALA A 74 1 14
HELIX 4 AA4 THR A 77 HIS A 92 1 16
HELIX 5 AA5 TYR A 102 ASN A 108 1 7
HELIX 6 AA6 GLY A 110 GLY A 122 1 13
HELIX 7 AA7 PRO A 132 GLU A 135 5 4
HELIX 8 AA8 SER A 136 HIS A 146 1 11
HELIX 9 AA9 ASP A 159 GLY A 170 1 12
HELIX 10 AB1 LEU A 193 TYR A 203 1 11
HELIX 11 AB2 SER A 216 ALA A 226 1 11
HELIX 12 AB3 GLY A 234 ASN A 244 1 11
HELIX 13 AB4 SER A 247 ALA A 265 1 19
HELIX 14 AB5 PRO B 18 ILE B 20 5 3
HELIX 15 AB6 LEU B 21 LYS B 37 1 17
HELIX 16 AB7 ASP B 38 TYR B 52 1 15
HELIX 17 AB8 ASP B 79 LEU B 81 5 3
HELIX 18 AB9 HIS B 86 MET B 101 1 16
HELIX 19 AC1 GLY B 113 GLY B 127 1 15
HELIX 20 AC2 ALA B 136 GLN B 142 1 7
HELIX 21 AC3 GLN B 142 MET B 152 1 11
HELIX 22 AC4 THR B 165 SER B 178 1 14
HELIX 23 AC5 PRO B 196 PHE B 204 1 9
HELIX 24 AC6 ARG B 206 GLY B 221 1 16
HELIX 25 AC7 GLY B 234 ALA B 242 1 9
HELIX 26 AC8 ASP B 243 ILE B 245 5 3
HELIX 27 AC9 GLY B 261 GLY B 265 5 5
HELIX 28 AD1 ALA B 269 GLY B 274 1 6
HELIX 29 AD2 SER B 301 ASP B 305 5 5
HELIX 30 AD3 GLY B 310 ILE B 319 1 10
HELIX 31 AD4 ASP B 329 GLY B 344 1 16
HELIX 32 AD5 ALA B 348 GLN B 365 1 18
HELIX 33 AD6 GLY B 380 LYS B 382 5 3
HELIX 34 AD7 ASP B 383 ARG B 394 1 12
SHEET 1 AA1 9 ALA A 149 PRO A 150 0
SHEET 2 AA1 9 SER A 125 VAL A 128 1 N VAL A 126 O ALA A 149
SHEET 3 AA1 9 ILE A 97 MET A 101 1 N MET A 101 O LEU A 127
SHEET 4 AA1 9 LEU A 48 GLY A 51 1 N LEU A 50 O GLY A 98
SHEET 5 AA1 9 ALA A 18 THR A 24 1 N VAL A 23 O GLY A 51
SHEET 6 AA1 9 GLY A 230 SER A 233 1 O ALA A 231 N VAL A 20
SHEET 7 AA1 9 ALA A 208 GLY A 211 1 N GLN A 210 O ILE A 232
SHEET 8 AA1 9 THR A 174 LEU A 177 1 N LEU A 176 O LEU A 209
SHEET 9 AA1 9 ILE A 153 CYS A 154 1 N CYS A 154 O TYR A 175
SHEET 1 AA2 4 TYR B 8 PHE B 9 0
SHEET 2 AA2 4 PHE B 12 TYR B 16 -1 O PHE B 12 N PHE B 9
SHEET 3 AA2 4 GLY B 281 MET B 286 -1 O LYS B 283 N GLY B 13
SHEET 4 AA2 4 ARG B 275 TYR B 279 -1 N GLY B 277 O ALA B 284
SHEET 1 AA3 6 LEU B 59 LYS B 61 0
SHEET 2 AA3 6 THR B 71 ARG B 77 -1 O LEU B 75 N THR B 60
SHEET 3 AA3 6 GLN B 370 LEU B 376 1 O LEU B 372 N THR B 72
SHEET 4 AA3 6 ALA B 226 CYS B 230 1 N ILE B 228 O ASN B 375
SHEET 5 AA3 6 GLY B 251 GLY B 259 1 O ILE B 253 N VAL B 227
SHEET 6 AA3 6 ASP B 323 THR B 328 1 O ILE B 327 N GLY B 258
SHEET 1 AA4 4 GLU B 155 VAL B 159 0
SHEET 2 AA4 4 LYS B 129 GLY B 135 1 N ILE B 132 O ILE B 157
SHEET 3 AA4 4 GLU B 105 THR B 110 1 N ILE B 106 O LYS B 129
SHEET 4 AA4 4 ALA B 184 TYR B 186 1 O HIS B 185 N GLU B 105
LINK NZ LYS B 87 C4A PLP B 520 1555 1555 1.29
LINK O ALA A 167 CS A CS A 310 1555 1555 3.00
LINK O ALA A 167 CS B CS A 310 1555 1555 3.01
LINK O SER A 168 CS B CS A 310 1555 1555 3.26
LINK O GLY A 170 CS A CS A 310 1555 1555 3.17
LINK O GLY A 170 CS B CS A 310 1555 1555 3.19
LINK O HIS A 204 CS A CS A 310 1555 1555 3.36
LINK O ALA A 265 CS A CS A 311 1555 1555 3.07
LINK O ARG A 267 CS A CS A 311 1555 1555 3.26
LINK O ARG A 267 CS B CS A 311 1555 1555 2.63
LINK CS A CS A 310 O HOH A 518 1555 1555 3.39
LINK CS B CS A 310 O HOH A 610 1555 1555 3.33
LINK CS A CS A 310 O HOH A 611 1555 1555 3.39
LINK CS B CS A 310 O HOH A 611 1555 1555 3.09
LINK CS A CS A 310 O HOH A 672 1555 1555 3.08
LINK CS B CS A 310 O HOH A 672 1555 1555 3.15
LINK CS A CS A 310 O HOH A 704 1555 1555 3.42
LINK CS A CS A 311 O HOH A 525 1555 1555 3.37
LINK CS A CS A 311 O HOH A 547 1555 1555 3.47
LINK CS A CS A 311 O LYS B 99 4546 1555 3.07
LINK CS B CS A 311 O LYS B 99 4546 1555 3.07
LINK CS A CS A 311 O HOH B 935 1555 4556 3.04
LINK CS B CS A 311 O HOH B 935 1555 4556 3.49
LINK O THR B 66 CS CS B 523 1555 1555 3.24
LINK OG1 THR B 66 CS CS B 523 1555 1555 3.25
LINK O THR B 69 CS CS B 523 1555 1555 3.03
LINK O THR B 71 CS CS B 523 1555 1555 3.01
LINK O ASP B 225 CS CS B 521 1555 1555 3.06
LINK O VAL B 231 CS C CS B 522 1555 1555 3.29
LINK O GLY B 232 CS C CS B 522 1555 1555 3.23
LINK O GLY B 232 CS A CS B 522 1555 1555 2.83
LINK O SER B 249 CS CS B 521 1555 1555 2.99
LINK OE2 GLU B 256 CS C CS B 522 1555 1555 3.37
LINK O GLY B 268 CS C CS B 522 1555 1555 3.30
LINK O GLY B 268 CS A CS B 522 1555 1555 3.07
LINK O LEU B 304 CS A CS B 522 1555 1555 3.38
LINK O PHE B 306 CS A CS B 522 1555 1555 2.98
LINK O SER B 308 CS C CS B 522 1555 1555 3.37
LINK O SER B 308 CS A CS B 522 1555 1555 3.27
LINK CS CS B 521 O HOH B 732 1555 1555 3.20
LINK CS CS B 521 O HOH B1011 1555 1555 2.93
LINK CS CS B 523 O HOH B 738 1555 1555 3.16
LINK CS CS B 523 O HOH B 810 1555 1555 3.31
LINK CS CS B 523 O HOH B 959 1555 1555 3.20
CISPEP 1 ASP A 27 PRO A 28 0 1.25
CISPEP 2 ARG B 55 PRO B 56 0 0.05
CISPEP 3 HIS B 195 PRO B 196 0 10.75
CRYST1 181.741 59.810 67.299 90.00 94.65 90.00 C 1 2 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.005502 0.000000 0.000448 0.00000
SCALE2 0.000000 0.016720 0.000000 0.00000
SCALE3 0.000000 0.000000 0.014908 0.00000