HEADER OXIDOREDUCTASE 03-FEB-21 7LL6 TITLE CRYSTAL STRUCTURE OF FUCOSE SYNTHETASE FAMILY PROTEIN FROM BRUCELLA TITLE 2 SUIS ATCC 23445 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GDP-L-FUCOSE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GDP-4-KETO-6-DEOXY-D-MANNOSE-3,5-EPIMERASE-4-REDUCTASE; COMPND 5 EC: 1.1.1.271; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRUCELLA SUIS (STRAIN ATCC 23445 / NCTC 10510); SOURCE 3 ORGANISM_TAXID: 470137; SOURCE 4 STRAIN: ATCC 23445 / NCTC 10510; SOURCE 5 ATCC: 23445; SOURCE 6 GENE: FCL, BSUIS_B0421; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BRSUB.00085.A.B1 KEYWDS SSGCID, GDP-L-FUCOSE SYNTHASE, NADP, GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE, KEYWDS 2 GDP-FUCOSE, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER KEYWDS 3 FOR INFECTIOUS DISEASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 18-OCT-23 7LL6 1 REMARK REVDAT 1 03-MAR-21 7LL6 0 JRNL AUTH J.ABENDROTH,P.S.HORANYI,D.D.LORIMER,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF FUCOSE SYNTHETASE FAMILY PROTEIN FROM JRNL TITL 2 BRUCELLA SUIS ATCC 23445 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.194092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 18165 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.710 REMARK 3 FREE R VALUE TEST SET COUNT : 1764 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.6400 - 5.2900 0.99 1340 158 0.1926 0.2401 REMARK 3 2 5.2800 - 4.2000 1.00 1235 181 0.1815 0.2054 REMARK 3 3 4.2000 - 3.6700 1.00 1299 127 0.1792 0.1896 REMARK 3 4 3.6700 - 3.3300 1.00 1256 138 0.2232 0.2349 REMARK 3 5 3.3300 - 3.0900 1.00 1297 106 0.2357 0.2905 REMARK 3 6 3.0900 - 2.9100 1.00 1208 166 0.2310 0.2590 REMARK 3 7 2.9100 - 2.7700 1.00 1271 120 0.2434 0.2348 REMARK 3 8 2.7700 - 2.6500 1.00 1275 127 0.2542 0.2738 REMARK 3 9 2.6500 - 2.5400 1.00 1245 106 0.2360 0.2813 REMARK 3 10 2.5400 - 2.4600 1.00 1242 146 0.2107 0.2219 REMARK 3 11 2.4600 - 2.3800 1.00 1252 121 0.2282 0.2680 REMARK 3 12 2.3800 - 2.3100 1.00 1250 135 0.2139 0.2692 REMARK 3 13 2.3100 - 2.2500 1.00 1231 133 0.2336 0.2599 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.249 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.219 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2190 REMARK 3 ANGLE : 0.851 3001 REMARK 3 CHIRALITY : 0.050 351 REMARK 3 PLANARITY : 0.007 405 REMARK 3 DIHEDRAL : 12.934 771 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 12 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0635 -4.7031 -2.2248 REMARK 3 T TENSOR REMARK 3 T11: 0.8635 T22: 0.8342 REMARK 3 T33: 0.6942 T12: -0.2546 REMARK 3 T13: -0.3405 T23: 0.2836 REMARK 3 L TENSOR REMARK 3 L11: 2.2713 L22: 2.8533 REMARK 3 L33: 3.2136 L12: -0.0003 REMARK 3 L13: -0.5964 L23: -0.4358 REMARK 3 S TENSOR REMARK 3 S11: 0.3632 S12: -0.6093 S13: -0.1406 REMARK 3 S21: 1.3932 S22: -0.8648 S23: -0.9764 REMARK 3 S31: 0.1362 S32: 1.2421 S33: 0.3261 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.9105 -1.8615 -10.9318 REMARK 3 T TENSOR REMARK 3 T11: 0.4247 T22: 0.2827 REMARK 3 T33: 0.3532 T12: -0.1553 REMARK 3 T13: 0.0055 T23: 0.0442 REMARK 3 L TENSOR REMARK 3 L11: 2.8076 L22: 4.4491 REMARK 3 L33: 4.5989 L12: 0.8660 REMARK 3 L13: 0.7566 L23: -1.0414 REMARK 3 S TENSOR REMARK 3 S11: 0.3186 S12: -0.3396 S13: 0.1011 REMARK 3 S21: 0.5528 S22: -0.5314 S23: 0.1597 REMARK 3 S31: -0.0788 S32: 0.2928 S33: 0.2038 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 148 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.4628 -5.7341 -9.1696 REMARK 3 T TENSOR REMARK 3 T11: 0.5695 T22: 0.3366 REMARK 3 T33: 0.3961 T12: -0.1419 REMARK 3 T13: -0.0066 T23: 0.1055 REMARK 3 L TENSOR REMARK 3 L11: 2.0238 L22: 2.1023 REMARK 3 L33: 4.6867 L12: 0.3740 REMARK 3 L13: 0.4981 L23: -0.6701 REMARK 3 S TENSOR REMARK 3 S11: 0.2980 S12: -0.2800 S13: -0.1125 REMARK 3 S21: 0.9631 S22: -0.6027 S23: -0.0276 REMARK 3 S31: 0.5215 S32: 0.3469 S33: 0.2824 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 186 THROUGH 241 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.2315 4.5216 9.1404 REMARK 3 T TENSOR REMARK 3 T11: 1.4283 T22: 0.7241 REMARK 3 T33: 0.5801 T12: -0.5445 REMARK 3 T13: 0.3600 T23: -0.0738 REMARK 3 L TENSOR REMARK 3 L11: 2.4809 L22: 4.9527 REMARK 3 L33: 0.7064 L12: 1.3995 REMARK 3 L13: 1.2017 L23: 1.4341 REMARK 3 S TENSOR REMARK 3 S11: 0.6272 S12: -0.8689 S13: 0.4676 REMARK 3 S21: 1.4985 S22: -1.1926 S23: 1.3501 REMARK 3 S31: 0.4716 S32: -0.6927 S33: 0.0432 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 242 THROUGH 254 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.2324 -11.4172 -3.3707 REMARK 3 T TENSOR REMARK 3 T11: 0.9474 T22: 0.4627 REMARK 3 T33: 0.4943 T12: -0.3093 REMARK 3 T13: 0.1737 T23: -0.0286 REMARK 3 L TENSOR REMARK 3 L11: 5.4089 L22: 2.3130 REMARK 3 L33: 3.3617 L12: 1.0208 REMARK 3 L13: 0.2054 L23: 2.4658 REMARK 3 S TENSOR REMARK 3 S11: -0.0062 S12: -0.2004 S13: -0.0662 REMARK 3 S21: 0.9963 S22: -0.5673 S23: 1.4276 REMARK 3 S31: 0.4785 S32: -0.1201 S33: 0.5674 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 255 THROUGH 269 ) REMARK 3 ORIGIN FOR THE GROUP (A): -47.6288 8.6806 15.3284 REMARK 3 T TENSOR REMARK 3 T11: 1.9461 T22: 1.2587 REMARK 3 T33: 1.6124 T12: -0.6938 REMARK 3 T13: 1.0209 T23: -0.6416 REMARK 3 L TENSOR REMARK 3 L11: 1.1532 L22: 2.4064 REMARK 3 L33: 5.1846 L12: -0.8388 REMARK 3 L13: -1.8131 L23: 2.2998 REMARK 3 S TENSOR REMARK 3 S11: -0.1323 S12: -0.1811 S13: -0.3758 REMARK 3 S21: 0.8255 S22: -0.5987 S23: 0.9320 REMARK 3 S31: 0.4856 S32: -0.6047 S33: 0.0691 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 270 THROUGH 305 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.6171 -6.1683 6.2820 REMARK 3 T TENSOR REMARK 3 T11: 1.2960 T22: 0.7890 REMARK 3 T33: 0.7179 T12: -0.4436 REMARK 3 T13: 0.3035 T23: -0.0428 REMARK 3 L TENSOR REMARK 3 L11: 2.0334 L22: 1.0950 REMARK 3 L33: 1.7493 L12: -0.5994 REMARK 3 L13: -0.2241 L23: 1.3315 REMARK 3 S TENSOR REMARK 3 S11: 0.3882 S12: -0.7471 S13: 0.0881 REMARK 3 S21: 1.7274 S22: -0.4331 S23: 0.7153 REMARK 3 S31: 0.1034 S32: -0.2589 S33: 0.0396 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 306 THROUGH 320 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.6150 6.6283 18.7085 REMARK 3 T TENSOR REMARK 3 T11: 2.3463 T22: 1.4940 REMARK 3 T33: 0.5038 T12: -0.6616 REMARK 3 T13: 0.1965 T23: -0.4180 REMARK 3 L TENSOR REMARK 3 L11: 0.9351 L22: 0.8456 REMARK 3 L33: 0.6023 L12: -0.0269 REMARK 3 L13: 0.5995 L23: 0.2642 REMARK 3 S TENSOR REMARK 3 S11: -0.3740 S12: -0.7325 S13: 0.3994 REMARK 3 S21: 0.8016 S22: 0.1864 S23: -0.0510 REMARK 3 S31: -0.4166 S32: 0.6782 S33: -0.2436 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7LL6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1000254619. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND (111) REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18199 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.182 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.3200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.34 REMARK 200 R MERGE FOR SHELL (I) : 0.62800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: PDB ENTRY 1E6U CHAIN A AS PER MORDA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MICROLYTIC MCSG1 SCREEN: 3.5M SODIUM REMARK 280 FORMATE, 100MM SODIUM ACETATE / HCL PH 4.6: REMARK 280 BRSUB.00085.A.B1.PS02124 AT 20MG/ML + NADP: TRAY 257990 H6: CRYO: REMARK 280 DIRECT: PUCK XBM5-2., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.44667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 74.89333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 74.89333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.44667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -37.44667 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 535 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -6 REMARK 465 ALA A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 MET A 2 REMARK 465 ILE A 3 REMARK 465 SER A 4 REMARK 465 THR A 5 REMARK 465 ALA A 6 REMARK 465 GLU A 7 REMARK 465 THR A 8 REMARK 465 GLY A 9 REMARK 465 ARG A 10 REMARK 465 GLU A 11 REMARK 465 GLU A 212 REMARK 465 VAL A 213 REMARK 465 VAL A 214 REMARK 465 LEU A 215 REMARK 465 TRP A 216 REMARK 465 GLY A 217 REMARK 465 SER A 218 REMARK 465 GLY A 219 REMARK 465 LYS A 220 REMARK 465 GLY A 273 REMARK 465 ARG A 274 REMARK 465 PHE A 275 REMARK 465 GLU A 276 REMARK 465 HIS A 277 REMARK 465 ASP A 278 REMARK 465 LEU A 279 REMARK 465 SER A 280 REMARK 465 LYS A 281 REMARK 465 PRO A 282 REMARK 465 ASP A 283 REMARK 465 GLY A 284 REMARK 465 THR A 285 REMARK 465 PRO A 286 REMARK 465 THR A 321 REMARK 465 ALA A 322 REMARK 465 GLY A 323 REMARK 465 SER A 324 REMARK 465 VAL A 325 REMARK 465 ALA A 326 REMARK 465 ALA A 327 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 20 CG CD CE NZ REMARK 470 ARG A 37 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 39 CG CD OE1 NE2 REMARK 470 ASP A 44 CG OD1 OD2 REMARK 470 ARG A 88 CG CD NE CZ NH1 NH2 REMARK 470 TYR A 181 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 201 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 202 CG1 CG2 REMARK 470 ARG A 206 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 208 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 211 CG CD OE1 OE2 REMARK 470 LEU A 222 CG CD1 CD2 REMARK 470 ARG A 223 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 254 CG CD OE1 OE2 REMARK 470 GLU A 255 CG CD OE1 OE2 REMARK 470 ILE A 258 CG1 CG2 CD1 REMARK 470 LYS A 259 CG CD CE NZ REMARK 470 GLU A 260 CG CD OE1 OE2 REMARK 470 LEU A 263 CG CD1 CD2 REMARK 470 ARG A 267 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 272 CG CD OE1 OE2 REMARK 470 ARG A 287 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 288 CG CD CE NZ REMARK 470 LEU A 289 CG CD1 CD2 REMARK 470 ARG A 303 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 305 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 308 CG OD1 OD2 REMARK 470 ARG A 311 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 312 CG OD1 OD2 REMARK 470 VAL A 313 CG1 CG2 REMARK 470 ARG A 315 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 318 CG CD1 CD2 REMARK 470 GLU A 319 CG CD OE1 OE2 REMARK 470 GLU A 320 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 184 O HOH A 501 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 178 -163.55 -128.36 REMARK 500 LYS A 288 35.83 -143.66 REMARK 500 REMARK 500 REMARK: NULL DBREF 7LL6 A 2 327 UNP A9WYA5 A9WYA5_BRUSI 1 326 SEQADV 7LL6 MET A -6 UNP A9WYA5 EXPRESSION TAG SEQADV 7LL6 ALA A -5 UNP A9WYA5 EXPRESSION TAG SEQADV 7LL6 HIS A -4 UNP A9WYA5 EXPRESSION TAG SEQADV 7LL6 HIS A -3 UNP A9WYA5 EXPRESSION TAG SEQADV 7LL6 HIS A -2 UNP A9WYA5 EXPRESSION TAG SEQADV 7LL6 HIS A -1 UNP A9WYA5 EXPRESSION TAG SEQADV 7LL6 HIS A 0 UNP A9WYA5 EXPRESSION TAG SEQADV 7LL6 HIS A 1 UNP A9WYA5 EXPRESSION TAG SEQRES 1 A 334 MET ALA HIS HIS HIS HIS HIS HIS MET ILE SER THR ALA SEQRES 2 A 334 GLU THR GLY ARG GLU PRO VAL TYR SER LEU THR GLY LYS SEQRES 3 A 334 LYS ILE PHE VAL ALA GLY HIS THR GLY MET VAL GLY SER SEQRES 4 A 334 ALA ILE LEU ARG ARG LEU GLN HIS GLU ASP CYS ASP ILE SEQRES 5 A 334 ILE THR ALA ALA HIS SER VAL LEU ASP LEU THR ARG GLN SEQRES 6 A 334 GLY PRO THR GLU ASN PHE ILE SER GLY HIS ARG PRO ASP SEQRES 7 A 334 VAL ILE ILE ILE ALA ALA ALA ARG VAL GLY GLY ILE LEU SEQRES 8 A 334 ALA ASN SER ARG PHE PRO ALA ASP PHE LEU TYR ASP ASN SEQRES 9 A 334 LEU ALA ILE GLY MET ASN LEU ILE HIS ALA ALA HIS GLN SEQRES 10 A 334 ILE GLY VAL GLU ARG LEU LEU TRP LEU GLY SER SER CYS SEQRES 11 A 334 ILE TYR PRO ARG ASP ALA ALA GLN PRO LEU THR GLU ASP SEQRES 12 A 334 ALA LEU LEU THR GLY PRO LEU GLU PRO THR ASN GLU ALA SEQRES 13 A 334 TYR ALA ILE ALA LYS ILE ALA GLY LEU LYS TYR ALA GLN SEQRES 14 A 334 SER CYS ALA ARG GLN PHE GLY ASP ARG PHE ILE THR ALA SEQRES 15 A 334 MET PRO THR ASN LEU TYR GLY PRO ASN ASP ASN PHE ASP SEQRES 16 A 334 PRO THR SER SER HIS VAL LEU PRO ALA LEU ILE ARG ARG SEQRES 17 A 334 VAL HIS GLU ALA ARG MET ARG GLY ALA GLU GLU VAL VAL SEQRES 18 A 334 LEU TRP GLY SER GLY LYS PRO LEU ARG GLU PHE LEU HIS SEQRES 19 A 334 VAL ASP ASP LEU ALA ASP ALA CYS LEU HIS LEU LEU ARG SEQRES 20 A 334 PHE TYR ASN GLY ILE GLU PRO VAL ASN ILE GLY SER GLY SEQRES 21 A 334 GLU GLU ILE SER ILE LYS GLU LEU ALA LEU THR VAL ALA SEQRES 22 A 334 ARG ILE VAL GLY TYR GLU GLY ARG PHE GLU HIS ASP LEU SEQRES 23 A 334 SER LYS PRO ASP GLY THR PRO ARG LYS LEU LEU ASP THR SEQRES 24 A 334 SER ARG ILE GLU ALA LEU GLY TRP GLN PRO ARG ILE ARG SEQRES 25 A 334 LEU GLU ASP GLY LEU ARG ASP VAL TYR ARG ASN TRP LEU SEQRES 26 A 334 GLU GLU THR ALA GLY SER VAL ALA ALA HET NAP A 401 48 HET MG A 402 1 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM MG MAGNESIUM ION HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 NAP C21 H28 N7 O17 P3 FORMUL 3 MG MG 2+ FORMUL 4 HOH *60(H2 O) HELIX 1 AA1 GLY A 28 GLN A 39 1 12 HELIX 2 AA2 ARG A 57 ARG A 69 1 13 HELIX 3 AA3 GLY A 82 PHE A 89 1 8 HELIX 4 AA4 PHE A 89 GLY A 112 1 24 HELIX 5 AA5 SER A 121 TYR A 125 5 5 HELIX 6 AA6 THR A 134 LEU A 138 5 5 HELIX 7 AA7 GLU A 144 THR A 146 5 3 HELIX 8 AA8 ASN A 147 GLY A 169 1 23 HELIX 9 AA9 HIS A 193 GLY A 209 1 17 HELIX 10 AB1 VAL A 228 TYR A 242 1 15 HELIX 11 AB2 ILE A 258 GLY A 270 1 13 HELIX 12 AB3 THR A 292 LEU A 298 1 7 HELIX 13 AB4 ARG A 305 GLU A 320 1 16 SHEET 1 AA1 6 ASP A 44 ILE A 46 0 SHEET 2 AA1 6 LYS A 20 ALA A 24 1 N ILE A 21 O ASP A 44 SHEET 3 AA1 6 VAL A 72 ILE A 75 1 O VAL A 72 N PHE A 22 SHEET 4 AA1 6 ARG A 115 LEU A 119 1 O LEU A 117 N ILE A 75 SHEET 5 AA1 6 PHE A 172 MET A 176 1 O ILE A 173 N LEU A 116 SHEET 6 AA1 6 VAL A 248 ASN A 249 1 O VAL A 248 N MET A 176 SHEET 1 AA2 2 LEU A 180 TYR A 181 0 SHEET 2 AA2 2 LEU A 226 HIS A 227 1 O LEU A 226 N TYR A 181 SHEET 1 AA3 2 LEU A 222 GLU A 224 0 SHEET 2 AA3 2 GLU A 255 SER A 257 -1 O ILE A 256 N ARG A 223 LINK O2N NAP A 401 MG MG A 402 1555 1555 2.18 CISPEP 1 GLN A 131 PRO A 132 0 3.80 CRYST1 75.650 75.650 112.340 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013219 0.007632 0.000000 0.00000 SCALE2 0.000000 0.015264 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008902 0.00000