HEADER VIRAL PROTEIN/IMMUNE SYSTEM 05-FEB-21 7LM8 TITLE CRYSTAL STRUCTURE OF SARS-COV-2 SPIKE PROTEIN RECEPTOR-BINDING DOMAIN TITLE 2 IN COMPLEX WITH TWO CROSS-NEUTRALIZING ANTIBODIES CV38-142 AND COVA1- TITLE 3 16 FABS ISOLATED FROM COVID-19 PATIENTS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: COVA1-16 FAB HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: COVA1-16 FAB LIGHT CHAIN; COMPND 11 CHAIN: L; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: CV38-142 FAB HEAVY CHAIN; COMPND 15 CHAIN: M; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 5; COMPND 18 MOLECULE: CV38-142 FAB LIGHT CHAIN; COMPND 19 CHAIN: N; COMPND 20 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: S, 2; SOURCE 7 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 8 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 16 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 18 MOL_ID: 3; SOURCE 19 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 20 ORGANISM_COMMON: HUMAN; SOURCE 21 ORGANISM_TAXID: 9606; SOURCE 22 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 23 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 25 MOL_ID: 4; SOURCE 26 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 27 ORGANISM_COMMON: HUMAN; SOURCE 28 ORGANISM_TAXID: 9606; SOURCE 29 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 30 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 31 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 32 MOL_ID: 5; SOURCE 33 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 34 ORGANISM_COMMON: HUMAN; SOURCE 35 ORGANISM_TAXID: 9606; SOURCE 36 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 37 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 38 EXPRESSION_SYSTEM_TAXID: 10090 KEYWDS SARS-COV-2, SARS-COV, ANTIBODY, SPIKE, CORONAVIRUS, COVID-19, SARS, KEYWDS 2 IMMUNE SYSTEM, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX, CROSS- KEYWDS 3 NEUTRALIZATION, SYNERGY, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.LIU,I.A.WILSON REVDAT 3 18-OCT-23 7LM8 1 JRNL REVDAT 2 09-FEB-22 7LM8 1 JRNL REMARK REVDAT 1 31-MAR-21 7LM8 0 JRNL AUTH H.LIU,M.YUAN,D.HUANG,S.BANGARU,F.ZHAO,C.D.LEE,L.PENG, JRNL AUTH 2 S.BARMAN,X.ZHU,D.NEMAZEE,D.R.BURTON,M.J.VAN GILS, JRNL AUTH 3 R.W.SANDERS,H.C.KORNAU,S.M.REINCKE,H.PRUSS,J.KREYE,N.C.WU, JRNL AUTH 4 A.B.WARD,I.A.WILSON JRNL TITL A COMBINATION OF CROSS-NEUTRALIZING ANTIBODIES SYNERGIZES TO JRNL TITL 2 PREVENT SARS-COV-2 AND SARS-COV PSEUDOVIRUS INFECTION. JRNL REF CELL HOST MICROBE V. 29 806 2021 JRNL REFN ESSN 1934-6069 JRNL PMID 33894127 JRNL DOI 10.1016/J.CHOM.2021.04.005 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH H.LIU,M.YUAN,D.HUANG,S.BANGARU,C.D.LEE,L.PENG,X.ZHU, REMARK 1 AUTH 2 D.NEMAZEE,M.J.VAN GILS,R.W.SANDERS,H.C.KORNAU,S.M.REINCKE, REMARK 1 AUTH 3 H.PRUSS,J.KREYE,N.C.WU,A.B.WARD,I.A.WILSON REMARK 1 TITL A COMBINATION OF CROSS-NEUTRALIZING ANTIBODIES SYNERGIZES TO REMARK 1 TITL 2 PREVENT SARS-COV-2 AND SARS-COV PSEUDOVIRUS INFECTION. REMARK 1 REF BIORXIV 2021 REMARK 1 REFN ISSN 2692-8205 REMARK 1 PMID 33594361 REMARK 1 DOI 10.1101/2021.02.11.430866 REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 106832 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 5355 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.7080 - 6.0058 1.00 3652 217 0.1929 0.2184 REMARK 3 2 6.0058 - 4.7713 1.00 3506 214 0.1520 0.1549 REMARK 3 3 4.7713 - 4.1694 1.00 3492 184 0.1250 0.1547 REMARK 3 4 4.1694 - 3.7888 1.00 3470 174 0.1459 0.1669 REMARK 3 5 3.7888 - 3.5175 1.00 3424 200 0.1513 0.1771 REMARK 3 6 3.5175 - 3.3103 1.00 3457 164 0.1631 0.1906 REMARK 3 7 3.3103 - 3.1447 1.00 3390 203 0.1662 0.2019 REMARK 3 8 3.1447 - 3.0079 1.00 3461 172 0.1734 0.2009 REMARK 3 9 3.0079 - 2.8921 1.00 3439 169 0.1782 0.1851 REMARK 3 10 2.8921 - 2.7924 1.00 3443 161 0.1756 0.2280 REMARK 3 11 2.7924 - 2.7051 1.00 3367 180 0.1765 0.2138 REMARK 3 12 2.7051 - 2.6278 1.00 3429 192 0.1767 0.2019 REMARK 3 13 2.6278 - 2.5587 1.00 3378 202 0.1771 0.2273 REMARK 3 14 2.5587 - 2.4963 1.00 3365 186 0.1715 0.2020 REMARK 3 15 2.4963 - 2.4395 1.00 3424 170 0.1757 0.2279 REMARK 3 16 2.4395 - 2.3876 1.00 3384 155 0.1741 0.2267 REMARK 3 17 2.3876 - 2.3399 1.00 3440 177 0.1730 0.2108 REMARK 3 18 2.3399 - 2.2957 1.00 3372 162 0.1658 0.1921 REMARK 3 19 2.2957 - 2.2547 1.00 3416 167 0.1673 0.1980 REMARK 3 20 2.2547 - 2.2165 1.00 3350 181 0.1656 0.2323 REMARK 3 21 2.2165 - 2.1808 1.00 3424 181 0.1738 0.1873 REMARK 3 22 2.1808 - 2.1472 1.00 3367 182 0.1745 0.2361 REMARK 3 23 2.1472 - 2.1157 1.00 3347 190 0.1769 0.2225 REMARK 3 24 2.1157 - 2.0859 1.00 3413 172 0.1880 0.2484 REMARK 3 25 2.0859 - 2.0577 1.00 3306 175 0.1887 0.1999 REMARK 3 26 2.0577 - 2.0310 0.99 3419 175 0.1965 0.2729 REMARK 3 27 2.0310 - 2.0056 0.99 3342 170 0.1993 0.2379 REMARK 3 28 2.0056 - 1.9814 0.97 3272 174 0.2005 0.2631 REMARK 3 29 1.9814 - 1.9584 0.93 3206 161 0.2128 0.2650 REMARK 3 30 1.9584 - 1.9364 0.82 2722 145 0.2377 0.3013 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -12.5851 -33.5397 19.4384 REMARK 3 T TENSOR REMARK 3 T11: 0.0979 T22: 0.1429 REMARK 3 T33: 0.0757 T12: -0.0090 REMARK 3 T13: 0.0067 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.1527 L22: 0.7203 REMARK 3 L33: 0.0708 L12: -0.2446 REMARK 3 L13: -0.0040 L23: -0.0337 REMARK 3 S TENSOR REMARK 3 S11: -0.0106 S12: -0.0255 S13: 0.0049 REMARK 3 S21: 0.0478 S22: 0.0102 S23: 0.0162 REMARK 3 S31: 0.0102 S32: -0.0042 S33: -0.0012 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7LM8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1000254618. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 107834 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.936 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.20 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.30 REMARK 200 R MERGE FOR SHELL (I) : 0.87300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7JMW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% (W/V) POLYETHYLENE GLYCOL 6000, REMARK 280 0.1 M CITRIC ACID PH 4.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.83200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.12850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 74.11700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 81.12850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.83200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 74.11700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L, M, N, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 319 REMARK 465 VAL A 320 REMARK 465 GLN A 321 REMARK 465 PRO A 322 REMARK 465 THR A 323 REMARK 465 GLU A 324 REMARK 465 SER A 325 REMARK 465 ILE A 326 REMARK 465 VAL A 327 REMARK 465 ARG A 328 REMARK 465 PHE A 329 REMARK 465 PRO A 330 REMARK 465 ASN A 331 REMARK 465 ILE A 332 REMARK 465 THR A 333 REMARK 465 SER A 530 REMARK 465 THR A 531 REMARK 465 ASN A 532 REMARK 465 LEU A 533 REMARK 465 VAL A 534 REMARK 465 LYS A 535 REMARK 465 ASN A 536 REMARK 465 LYS A 537 REMARK 465 CYS A 538 REMARK 465 VAL A 539 REMARK 465 ASN A 540 REMARK 465 PHE A 541 REMARK 465 SER A 542 REMARK 465 GLY A 543 REMARK 465 HIS A 544 REMARK 465 HIS A 545 REMARK 465 HIS A 546 REMARK 465 HIS A 547 REMARK 465 HIS A 548 REMARK 465 HIS A 549 REMARK 465 SER H 128 REMARK 465 LYS H 129 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 SER H 132 REMARK 465 CYS H 216 REMARK 465 CYS L 214 REMARK 465 SER L 215 REMARK 465 LYS M 129 REMARK 465 SER M 130 REMARK 465 THR M 131 REMARK 465 SER M 132 REMARK 465 GLY M 133 REMARK 465 SER M 215 REMARK 465 CYS M 216 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 346 NH1 NH2 REMARK 470 LYS A 386 CD CE NZ REMARK 470 VAL A 483 CG1 CG2 REMARK 470 PHE A 486 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 529 CE NZ REMARK 470 LYS H 214 CD CE NZ REMARK 470 SER H 215 OG REMARK 470 LYS L 188 CG CD CE NZ REMARK 470 GLU L 213 CG CD OE1 OE2 REMARK 470 LYS M 13 CE NZ REMARK 470 GLU M 212 CD OE1 OE2 REMARK 470 LYS M 214 CG CD CE NZ REMARK 470 LYS N 126 CE NZ REMARK 470 LYS N 169 CG CD CE NZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER N 114 CA CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH L 462 O HOH L 568 2.13 REMARK 500 O1 EDO A 606 O HOH A 701 2.14 REMARK 500 O HOH A 785 O HOH A 833 2.16 REMARK 500 O HOH A 766 O HOH A 793 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 422 -55.78 -125.27 REMARK 500 ASP H 144 63.00 70.72 REMARK 500 THR H 191 -46.86 -133.68 REMARK 500 SER L 30 -128.45 51.94 REMARK 500 ALA L 51 -42.34 73.77 REMARK 500 ALA L 84 175.58 177.37 REMARK 500 SER M 100 -109.96 46.09 REMARK 500 ASP M 144 65.77 70.49 REMARK 500 SER N 30 -120.19 53.07 REMARK 500 ALA N 51 -34.43 68.74 REMARK 500 ALA N 84 173.45 177.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH N 641 DISTANCE = 5.92 ANGSTROMS DBREF 7LM8 A 319 541 UNP P0DTC2 SPIKE_SARS2 319 541 DBREF 7LM8 H 1 216 PDB 7LM8 7LM8 1 216 DBREF 7LM8 L 1 215 PDB 7LM8 7LM8 1 215 DBREF 7LM8 M 1 216 PDB 7LM8 7LM8 1 216 DBREF 7LM8 N 1 215 PDB 7LM8 7LM8 1 215 SEQADV 7LM8 SER A 542 UNP P0DTC2 EXPRESSION TAG SEQADV 7LM8 GLY A 543 UNP P0DTC2 EXPRESSION TAG SEQADV 7LM8 HIS A 544 UNP P0DTC2 EXPRESSION TAG SEQADV 7LM8 HIS A 545 UNP P0DTC2 EXPRESSION TAG SEQADV 7LM8 HIS A 546 UNP P0DTC2 EXPRESSION TAG SEQADV 7LM8 HIS A 547 UNP P0DTC2 EXPRESSION TAG SEQADV 7LM8 HIS A 548 UNP P0DTC2 EXPRESSION TAG SEQADV 7LM8 HIS A 549 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 231 ARG VAL GLN PRO THR GLU SER ILE VAL ARG PHE PRO ASN SEQRES 2 A 231 ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN ALA SEQRES 3 A 231 THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS ARG SEQRES 4 A 231 ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR ASN SEQRES 5 A 231 SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SER SEQRES 6 A 231 PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL TYR SEQRES 7 A 231 ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG GLN SEQRES 8 A 231 ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR ASN SEQRES 9 A 231 TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE ALA SEQRES 10 A 231 TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY ASN SEQRES 11 A 231 TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN LEU SEQRES 12 A 231 LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR GLN SEQRES 13 A 231 ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE ASN SEQRES 14 A 231 CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO THR SEQRES 15 A 231 ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL LEU SEQRES 16 A 231 SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS GLY SEQRES 17 A 231 PRO LYS LYS SER THR ASN LEU VAL LYS ASN LYS CYS VAL SEQRES 18 A 231 ASN PHE SER GLY HIS HIS HIS HIS HIS HIS SEQRES 1 H 232 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 232 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 232 TYR THR PHE THR SER TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 H 232 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY ILE ILE ASN SEQRES 5 H 232 SER SER GLY GLY SER THR SER TYR ALA GLN LYS PHE GLN SEQRES 6 H 232 GLY ARG VAL THR MET THR ARG ASP THR SER THR SER THR SEQRES 7 H 232 VAL TYR MET GLU LEU SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 232 ALA VAL TYR TYR CYS ALA ARG PRO PRO ARG ASN TYR TYR SEQRES 9 H 232 ASP ARG SER GLY TYR TYR GLN ARG ALA GLU TYR PHE GLN SEQRES 10 H 232 HIS TRP GLY GLN GLY THR LEU VAL THR VAL SER SER ALA SEQRES 11 H 232 SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SER SEQRES 12 H 232 SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY CYS SEQRES 13 H 232 LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SER SEQRES 14 H 232 TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR PHE SEQRES 15 H 232 PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SEQRES 16 H 232 SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR GLN SEQRES 17 H 232 THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN THR SEQRES 18 H 232 LYS VAL ASP LYS ARG VAL GLU PRO LYS SER CYS SEQRES 1 L 215 ASP ILE GLN LEU THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 215 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 L 215 GLN ASP ILE SER ASN TYR LEU ASN TRP TYR GLN GLN ARG SEQRES 4 L 215 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ASP ALA SER SEQRES 5 L 215 ASN LEU GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 215 GLY SER GLY THR ASP PHE THR PHE THR ILE SER SER LEU SEQRES 7 L 215 GLN PRO GLU ASP ILE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 L 215 ASP ASN PRO PRO LEU THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 L 215 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 215 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 215 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 215 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 215 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 215 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 215 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 215 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 215 PHE ASN ARG GLY GLU CYS SER SEQRES 1 M 226 GLU VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 M 226 PRO GLY GLU SER LEU LYS ILE SER CYS GLN GLY SER GLY SEQRES 3 M 226 TYR SER PHE THR SER TYR TRP ILE GLY TRP VAL ARG GLN SEQRES 4 M 226 MET PRO GLY LYS GLY LEU GLU TRP MET GLY ILE ILE TYR SEQRES 5 M 226 PRO GLY GLU SER ASP THR ARG TYR SER SER SER PHE GLN SEQRES 6 M 226 GLY HIS VAL THR ILE SER ALA ASP LYS SER ILE SER THR SEQRES 7 M 226 ALA TYR LEU GLN TRP SER SER LEU LYS ALA SER ASP THR SEQRES 8 M 226 ALA MET TYR TYR CYS ALA ARG ILE ARG GLY VAL TYR SER SEQRES 9 M 226 SER GLY TRP ILE GLY GLY ASP TYR TRP GLY GLN GLY THR SEQRES 10 M 226 LEU VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER SEQRES 11 M 226 VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY SEQRES 12 M 226 GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE SEQRES 13 M 226 PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU SEQRES 14 M 226 THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SEQRES 15 M 226 SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SEQRES 16 M 226 SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL SEQRES 17 M 226 ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL SEQRES 18 M 226 GLU PRO LYS SER CYS SEQRES 1 N 217 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 N 217 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 N 217 GLN SER ILE SER SER TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 N 217 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER SEQRES 5 N 217 SER LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 N 217 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 N 217 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN SER SEQRES 8 N 217 TYR SER THR PRO ARG GLN TRP THR PHE GLY GLN GLY THR SEQRES 9 N 217 LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL SEQRES 10 N 217 PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY SEQRES 11 N 217 THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO SEQRES 12 N 217 ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU SEQRES 13 N 217 GLN SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SEQRES 14 N 217 SER LYS ASP SER THR TYR SER LEU SER SER THR LEU THR SEQRES 15 N 217 LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA SEQRES 16 N 217 CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR SEQRES 17 N 217 LYS SER PHE ASN ARG GLY GLU CYS SER HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET FUC B 4 10 HET EDO A 601 4 HET EDO A 602 4 HET EDO A 603 4 HET EDO A 604 4 HET EDO A 605 4 HET EDO A 606 4 HET EDO H 301 4 HET EDO L 301 4 HET EDO L 302 4 HET EDO M 301 4 HET EDO M 302 4 HET EDO M 303 4 HET EDO M 304 4 HET EDO N 301 4 HET EDO N 302 4 HET EDO N 303 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 6 NAG 2(C8 H15 N O6) FORMUL 6 BMA C6 H12 O6 FORMUL 6 FUC C6 H12 O5 FORMUL 7 EDO 16(C2 H6 O2) FORMUL 23 HOH *1007(H2 O) HELIX 1 AA1 PRO A 337 ASN A 343 1 7 HELIX 2 AA2 SER A 349 TRP A 353 5 5 HELIX 3 AA3 TYR A 365 ASN A 370 1 6 HELIX 4 AA4 SER A 383 ASP A 389 5 7 HELIX 5 AA5 ASP A 405 ILE A 410 5 6 HELIX 6 AA6 GLY A 416 ASN A 422 1 7 HELIX 7 AA7 SER A 438 SER A 443 1 6 HELIX 8 AA8 GLY A 502 TYR A 505 5 4 HELIX 9 AA9 THR H 28 SER H 31 5 4 HELIX 10 AB1 GLN H 61 GLN H 64 5 4 HELIX 11 AB2 THR H 73 THR H 75 5 3 HELIX 12 AB3 ARG H 83 THR H 87 5 5 HELIX 13 AB4 SER H 156 ALA H 158 5 3 HELIX 14 AB5 SER H 187 LEU H 189 5 3 HELIX 15 AB6 LYS H 201 ASN H 204 5 4 HELIX 16 AB7 GLN L 79 ILE L 83 5 5 HELIX 17 AB8 SER L 121 LYS L 126 1 6 HELIX 18 AB9 LYS L 183 HIS L 189 1 7 HELIX 19 AC1 SER M 28 TYR M 32 5 5 HELIX 20 AC2 LYS M 73 ILE M 75 5 3 HELIX 21 AC3 LYS M 83 THR M 87 5 5 HELIX 22 AC4 SER M 156 ALA M 158 5 3 HELIX 23 AC5 SER M 187 LEU M 189 5 3 HELIX 24 AC6 LYS M 201 ASN M 204 5 4 HELIX 25 AC7 GLN N 79 PHE N 83 5 5 HELIX 26 AC8 THR N 94 TRP N 96 5 5 HELIX 27 AC9 SER N 121 LYS N 126 1 6 HELIX 28 AD1 LYS N 183 LYS N 188 1 6 SHEET 1 AA1 5 ASN A 354 ILE A 358 0 SHEET 2 AA1 5 ASN A 394 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AA1 5 PRO A 507 GLU A 516 -1 O VAL A 512 N ASP A 398 SHEET 4 AA1 5 GLY A 431 ASN A 437 -1 N ILE A 434 O VAL A 511 SHEET 5 AA1 5 THR A 376 TYR A 380 -1 N TYR A 380 O GLY A 431 SHEET 1 AA2 3 CYS A 361 VAL A 362 0 SHEET 2 AA2 3 VAL A 524 CYS A 525 1 O CYS A 525 N CYS A 361 SHEET 3 AA2 3 CYS A 391 PHE A 392 -1 N PHE A 392 O VAL A 524 SHEET 1 AA3 2 LEU A 452 ARG A 454 0 SHEET 2 AA3 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AA4 2 TYR A 473 GLN A 474 0 SHEET 2 AA4 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AA5 4 GLN H 3 GLN H 6 0 SHEET 2 AA5 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AA5 4 THR H 77 LEU H 82 -1 O VAL H 78 N CYS H 22 SHEET 4 AA5 4 VAL H 67 ASP H 72 -1 N THR H 70 O TYR H 79 SHEET 1 AA6 6 GLU H 10 LYS H 12 0 SHEET 2 AA6 6 THR H 107 VAL H 111 1 O THR H 110 N GLU H 10 SHEET 3 AA6 6 ALA H 88 ARG H 94 -1 N TYR H 90 O THR H 107 SHEET 4 AA6 6 TYR H 33 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AA6 6 LEU H 45 ASN H 52 -1 O ILE H 51 N MET H 34 SHEET 6 AA6 6 THR H 57 TYR H 59 -1 O SER H 58 N ILE H 50 SHEET 1 AA7 4 GLU H 10 LYS H 12 0 SHEET 2 AA7 4 THR H 107 VAL H 111 1 O THR H 110 N GLU H 10 SHEET 3 AA7 4 ALA H 88 ARG H 94 -1 N TYR H 90 O THR H 107 SHEET 4 AA7 4 HIS H 102 TRP H 103 -1 O HIS H 102 N ARG H 94 SHEET 1 AA8 2 TYR H 99 TYR H 100 0 SHEET 2 AA8 2 TYR H 100F GLN H 100G-1 O GLN H 100G N TYR H 99 SHEET 1 AA9 4 SER H 120 LEU H 124 0 SHEET 2 AA9 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA9 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA9 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AB1 4 SER H 120 LEU H 124 0 SHEET 2 AB1 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AB1 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AB1 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AB2 3 THR H 151 TRP H 154 0 SHEET 2 AB2 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AB2 3 THR H 205 ARG H 210 -1 O THR H 205 N HIS H 200 SHEET 1 AB3 4 LEU L 4 SER L 7 0 SHEET 2 AB3 4 VAL L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 AB3 4 ASP L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 AB3 4 PHE L 62 GLY L 66 -1 N SER L 63 O THR L 74 SHEET 1 AB4 6 SER L 10 SER L 14 0 SHEET 2 AB4 6 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 AB4 6 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AB4 6 LEU L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AB4 6 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 AB4 6 ASN L 53 LEU L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 AB5 4 SER L 10 SER L 14 0 SHEET 2 AB5 4 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 AB5 4 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AB5 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AB6 4 SER L 114 PHE L 118 0 SHEET 2 AB6 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB6 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AB6 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB7 4 ALA L 153 LEU L 154 0 SHEET 2 AB7 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB7 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AB7 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 AB8 4 GLN M 3 GLN M 6 0 SHEET 2 AB8 4 LEU M 18 SER M 25 -1 O GLN M 23 N VAL M 5 SHEET 3 AB8 4 THR M 77 TRP M 82 -1 O TRP M 82 N LEU M 18 SHEET 4 AB8 4 THR M 68 ASP M 72 -1 N SER M 70 O TYR M 79 SHEET 1 AB9 6 GLU M 10 LYS M 12 0 SHEET 2 AB9 6 THR M 107 VAL M 111 1 O THR M 110 N GLU M 10 SHEET 3 AB9 6 ALA M 88 ILE M 95 -1 N ALA M 88 O VAL M 109 SHEET 4 AB9 6 ILE M 34 GLN M 39 -1 N VAL M 37 O TYR M 91 SHEET 5 AB9 6 LEU M 45 ILE M 51 -1 O MET M 48 N TRP M 36 SHEET 6 AB9 6 THR M 57 TYR M 59 -1 O ARG M 58 N ILE M 50 SHEET 1 AC1 4 GLU M 10 LYS M 12 0 SHEET 2 AC1 4 THR M 107 VAL M 111 1 O THR M 110 N GLU M 10 SHEET 3 AC1 4 ALA M 88 ILE M 95 -1 N ALA M 88 O VAL M 109 SHEET 4 AC1 4 GLY M 100F TRP M 103 -1 O TYR M 102 N ARG M 94 SHEET 1 AC2 2 VAL M 98 TYR M 99 0 SHEET 2 AC2 2 GLY M 100B TRP M 100C-1 O GLY M 100B N TYR M 99 SHEET 1 AC3 4 SER M 120 LEU M 124 0 SHEET 2 AC3 4 THR M 135 TYR M 145 -1 O GLY M 139 N LEU M 124 SHEET 3 AC3 4 TYR M 176 PRO M 185 -1 O VAL M 184 N ALA M 136 SHEET 4 AC3 4 VAL M 163 THR M 165 -1 N HIS M 164 O VAL M 181 SHEET 1 AC4 4 SER M 120 LEU M 124 0 SHEET 2 AC4 4 THR M 135 TYR M 145 -1 O GLY M 139 N LEU M 124 SHEET 3 AC4 4 TYR M 176 PRO M 185 -1 O VAL M 184 N ALA M 136 SHEET 4 AC4 4 VAL M 169 LEU M 170 -1 N VAL M 169 O SER M 177 SHEET 1 AC5 3 THR M 151 TRP M 154 0 SHEET 2 AC5 3 ILE M 195 HIS M 200 -1 O ASN M 197 N SER M 153 SHEET 3 AC5 3 THR M 205 LYS M 210 -1 O VAL M 207 N VAL M 198 SHEET 1 AC6 4 MET N 4 SER N 7 0 SHEET 2 AC6 4 VAL N 19 ALA N 25 -1 O ARG N 24 N THR N 5 SHEET 3 AC6 4 ASP N 70 ILE N 75 -1 O LEU N 73 N ILE N 21 SHEET 4 AC6 4 PHE N 62 SER N 67 -1 N SER N 63 O THR N 74 SHEET 1 AC7 6 SER N 10 SER N 14 0 SHEET 2 AC7 6 THR N 102 LYS N 107 1 O GLU N 105 N LEU N 11 SHEET 3 AC7 6 ALA N 84 GLN N 90 -1 N ALA N 84 O VAL N 104 SHEET 4 AC7 6 LEU N 33 GLN N 38 -1 N TYR N 36 O TYR N 87 SHEET 5 AC7 6 LYS N 45 TYR N 49 -1 O LEU N 47 N TRP N 35 SHEET 6 AC7 6 SER N 53 LEU N 54 -1 O SER N 53 N TYR N 49 SHEET 1 AC8 4 SER N 10 SER N 14 0 SHEET 2 AC8 4 THR N 102 LYS N 107 1 O GLU N 105 N LEU N 11 SHEET 3 AC8 4 ALA N 84 GLN N 90 -1 N ALA N 84 O VAL N 104 SHEET 4 AC8 4 THR N 97 PHE N 98 -1 O THR N 97 N GLN N 90 SHEET 1 AC9 4 SER N 114 PHE N 118 0 SHEET 2 AC9 4 THR N 129 PHE N 139 -1 O LEU N 135 N PHE N 116 SHEET 3 AC9 4 TYR N 173 SER N 182 -1 O LEU N 179 N VAL N 132 SHEET 4 AC9 4 SER N 159 VAL N 163 -1 N GLN N 160 O THR N 178 SHEET 1 AD1 4 ALA N 153 LEU N 154 0 SHEET 2 AD1 4 LYS N 145 VAL N 150 -1 N VAL N 150 O ALA N 153 SHEET 3 AD1 4 VAL N 191 THR N 197 -1 O GLU N 195 N GLN N 147 SHEET 4 AD1 4 VAL N 205 ASN N 210 -1 O VAL N 205 N VAL N 196 SSBOND 1 CYS A 336 CYS A 361 1555 1555 2.06 SSBOND 2 CYS A 379 CYS A 432 1555 1555 2.11 SSBOND 3 CYS A 391 CYS A 525 1555 1555 2.07 SSBOND 4 CYS A 480 CYS A 488 1555 1555 2.05 SSBOND 5 CYS H 22 CYS H 92 1555 1555 2.11 SSBOND 6 CYS H 140 CYS H 196 1555 1555 2.07 SSBOND 7 CYS L 23 CYS L 88 1555 1555 2.18 SSBOND 8 CYS L 134 CYS L 194 1555 1555 2.08 SSBOND 9 CYS M 22 CYS M 92 1555 1555 2.07 SSBOND 10 CYS M 140 CYS M 196 1555 1555 2.06 SSBOND 11 CYS N 23 CYS N 88 1555 1555 2.15 SSBOND 12 CYS N 134 CYS N 194 1555 1555 2.09 LINK ND2 ASN A 343 C1 NAG B 1 1555 1555 1.46 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.37 LINK O6 NAG B 1 C1 FUC B 4 1555 1555 1.38 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.37 CISPEP 1 PHE H 146 PRO H 147 0 -8.96 CISPEP 2 GLU H 148 PRO H 149 0 1.09 CISPEP 3 SER L 7 PRO L 8 0 -5.56 CISPEP 4 PRO L 94 PRO L 95 0 2.28 CISPEP 5 TYR L 140 PRO L 141 0 4.22 CISPEP 6 PHE M 146 PRO M 147 0 -5.79 CISPEP 7 GLU M 148 PRO M 149 0 1.03 CISPEP 8 SER N 7 PRO N 8 0 -3.86 CISPEP 9 TYR N 140 PRO N 141 0 3.29 CRYST1 59.664 148.234 162.257 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016761 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006746 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006163 0.00000