HEADER VIRAL PROTEIN, HYDROLASE 27-FEB-21 7LW6
TITLE THE CRYSTAL STRUCTURE OF THE 2009/H1N1/CALIFORNIA PA ENDONUCLEASE I38T
TITLE 2 MUTANT IN COMPLEX WITH RALTEGRAVIR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: POLYMERASE ACIDIC PROTEIN;
COMPND 3 CHAIN: A;
COMPND 4 ENGINEERED: YES;
COMPND 5 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/LUXEMBOURG/43/2009(H1N1));
SOURCE 3 ORGANISM_TAXID: 655278;
SOURCE 4 STRAIN: A/LUXEMBOURG/43/2009(H1N1);
SOURCE 5 GENE: PA;
SOURCE 6 EXPRESSION_SYSTEM: INFLUENZA A VIRUS;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 11320
KEYWDS NUCLEASE, INFLUENZA, INHIBITOR RESISTANCE, VIRAL PROTEIN, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR M.G.CUYPERS,P.J.SLAVISH,S.W.WHITE,Z.RANKOVIK
REVDAT 3 25-OCT-23 7LW6 1 REMARK
REVDAT 2 29-MAR-23 7LW6 1 JRNL
REVDAT 1 26-MAY-21 7LW6 0
JRNL AUTH P.J.SLAVISH,M.G.CUYPERS,M.A.RIMMER,A.ABDOLVAHABI,T.JEEVAN,
JRNL AUTH 2 G.KUMAR,J.A.JARUSIEWICZ,S.VAITHIYALINGAM,J.C.JONES,
JRNL AUTH 3 J.J.BOWLING,J.E.PRICE,R.M.DUBOIS,J.MIN,R.J.WEBBY,Z.RANKOVIC,
JRNL AUTH 4 S.W.WHITE
JRNL TITL CHEMICAL SCAFFOLD RECYCLING: STRUCTURE-GUIDED CONVERSION OF
JRNL TITL 2 AN HIV INTEGRASE INHIBITOR INTO A POTENT INFLUENZA VIRUS
JRNL TITL 3 RNA-DEPENDENT RNA POLYMERASE INHIBITOR DESIGNED TO MINIMIZE
JRNL TITL 4 RESISTANCE POTENTIAL.
JRNL REF EUR.J.MED.CHEM. V. 247 15035 2023
JRNL REFN ISSN 0223-5234
JRNL PMID 36603507
JRNL DOI 10.1016/J.EJMECH.2022.115035
REMARK 2
REMARK 2 RESOLUTION. 2.38 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.19.1_4122
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.35
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340
REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7
REMARK 3 NUMBER OF REFLECTIONS : 11140
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.219
REMARK 3 R VALUE (WORKING SET) : 0.216
REMARK 3 FREE R VALUE : 0.265
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700
REMARK 3 FREE R VALUE TEST SET COUNT : 524
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 38.3500 - 3.7800 0.97 2724 142 0.1917 0.2448
REMARK 3 2 3.7800 - 3.0000 0.99 2643 140 0.2434 0.2826
REMARK 3 3 3.0000 - 2.6200 1.00 2654 104 0.2872 0.3540
REMARK 3 4 2.6200 - 2.3800 0.99 2595 138 0.2479 0.2952
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.257
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.606
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 74.80
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 85.50
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.012 1539
REMARK 3 ANGLE : 0.873 2084
REMARK 3 CHIRALITY : 0.040 218
REMARK 3 PLANARITY : 0.003 264
REMARK 3 DIHEDRAL : 18.560 558
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 4
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID -4 THROUGH 31 )
REMARK 3 ORIGIN FOR THE GROUP (A): 34.1051 19.1613 3.6017
REMARK 3 T TENSOR
REMARK 3 T11: 1.0095 T22: 0.7761
REMARK 3 T33: 0.5370 T12: 0.0102
REMARK 3 T13: 0.2032 T23: -0.0004
REMARK 3 L TENSOR
REMARK 3 L11: 9.5777 L22: 5.8209
REMARK 3 L33: 2.3250 L12: 1.4778
REMARK 3 L13: 0.7581 L23: 3.3155
REMARK 3 S TENSOR
REMARK 3 S11: 0.4030 S12: 0.9136 S13: -0.6047
REMARK 3 S21: 0.5184 S22: -0.3292 S23: -0.0842
REMARK 3 S31: 1.1918 S32: 0.2169 S33: -0.0935
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 32 THROUGH 115 )
REMARK 3 ORIGIN FOR THE GROUP (A): 46.9473 22.3557 19.5948
REMARK 3 T TENSOR
REMARK 3 T11: 0.7278 T22: 0.6054
REMARK 3 T33: 0.5351 T12: 0.0262
REMARK 3 T13: 0.1885 T23: 0.1267
REMARK 3 L TENSOR
REMARK 3 L11: 5.4518 L22: 2.7938
REMARK 3 L33: 1.9474 L12: -0.0823
REMARK 3 L13: 2.2911 L23: -0.1607
REMARK 3 S TENSOR
REMARK 3 S11: 0.1066 S12: -0.0347 S13: 0.0767
REMARK 3 S21: 0.3404 S22: -0.1672 S23: -0.1034
REMARK 3 S31: 0.5559 S32: 0.0961 S33: 0.0568
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 126 )
REMARK 3 ORIGIN FOR THE GROUP (A): 36.8743 17.7061 24.0347
REMARK 3 T TENSOR
REMARK 3 T11: 0.9122 T22: 0.6106
REMARK 3 T33: 0.6640 T12: -0.1451
REMARK 3 T13: 0.2338 T23: 0.2187
REMARK 3 L TENSOR
REMARK 3 L11: 6.5780 L22: 4.6800
REMARK 3 L33: 3.9983 L12: 0.6915
REMARK 3 L13: 2.9014 L23: 0.0352
REMARK 3 S TENSOR
REMARK 3 S11: 0.2765 S12: -1.4934 S13: -0.7620
REMARK 3 S21: -0.1470 S22: -0.1648 S23: 0.4073
REMARK 3 S31: 0.5640 S32: -0.7133 S33: -0.1111
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 194 )
REMARK 3 ORIGIN FOR THE GROUP (A): 30.9814 20.0968 23.2697
REMARK 3 T TENSOR
REMARK 3 T11: 0.8519 T22: 0.6408
REMARK 3 T33: 0.5920 T12: -0.2604
REMARK 3 T13: 0.2525 T23: 0.0253
REMARK 3 L TENSOR
REMARK 3 L11: 4.2079 L22: 0.9703
REMARK 3 L33: 6.2354 L12: -0.6298
REMARK 3 L13: 2.2387 L23: -0.1239
REMARK 3 S TENSOR
REMARK 3 S11: 0.0868 S12: -0.5382 S13: -0.1570
REMARK 3 S21: 0.2952 S22: -0.2309 S23: 0.0272
REMARK 3 S31: 0.8232 S32: -0.5262 S33: 0.0462
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 7LW6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAR-21.
REMARK 100 THE DEPOSITION ID IS D_1000255079.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 09-APR-19
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 22-ID
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.000
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : AIMLESS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11154
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380
REMARK 200 RESOLUTION RANGE LOW (A) : 74.400
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3
REMARK 200 DATA REDUNDANCY : 5.700
REMARK 200 R MERGE (I) : 0.05100
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.1000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.47
REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8
REMARK 200 DATA REDUNDANCY IN SHELL : 6.10
REMARK 200 R MERGE FOR SHELL (I) : 0.96100
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: MOLREP
REMARK 200 STARTING MODEL: 5VPT
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 57.53
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.8, 1 M AMMONIUM
REMARK 280 SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15, VAPOR DIFFUSION,
REMARK 280 HANGING DROP, TEMPERATURE 291K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z
REMARK 290 3555 -Y,X,Z
REMARK 290 4555 Y,-X,Z
REMARK 290 5555 -X,Y,-Z
REMARK 290 6555 X,-Y,-Z
REMARK 290 7555 Y,X,-Z
REMARK 290 8555 -Y,-X,-Z
REMARK 290 9555 X+1/2,Y+1/2,Z+1/2
REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2
REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2
REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2
REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2
REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2
REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2
REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 44.75750
REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 44.75750
REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 66.90100
REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 44.75750
REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 44.75750
REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 66.90100
REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 44.75750
REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 44.75750
REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 66.90100
REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 44.75750
REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 44.75750
REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 66.90100
REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 44.75750
REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 44.75750
REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 66.90100
REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 44.75750
REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 44.75750
REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 66.90100
REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 44.75750
REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 44.75750
REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 66.90100
REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 44.75750
REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 44.75750
REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 66.90100
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 17970 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 61710 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -238.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 89.51500
REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 89.51500
REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 89.51500
REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 89.51500
REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000
REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 89.51500
REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 0.00000
REMARK 350 BIOMT1 6 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 89.51500
REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 0.00000
REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT3 7 0.000000 0.000000 -1.000000 0.00000
REMARK 350 BIOMT1 8 0.000000 -1.000000 0.000000 89.51500
REMARK 350 BIOMT2 8 -1.000000 0.000000 0.000000 89.51500
REMARK 350 BIOMT3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A -19
REMARK 465 GLY A -18
REMARK 465 SER A -17
REMARK 465 SER A -16
REMARK 465 HIS A -15
REMARK 465 HIS A -14
REMARK 465 HIS A -13
REMARK 465 HIS A -12
REMARK 465 HIS A -11
REMARK 465 HIS A -10
REMARK 465 SER A -9
REMARK 465 SER A -8
REMARK 465 GLY A -7
REMARK 465 LEU A -6
REMARK 465 VAL A -5
REMARK 465 GLU A 195
REMARK 465 ARG A 196
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 ARG A -3 CG CD NE CZ NH1 NH2
REMARK 470 GLU A 15 CD OE1 OE2
REMARK 470 LYS A 19 CE NZ
REMARK 470 ARG A 84 CG CD NE CZ NH1 NH2
REMARK 470 GLU A 101 CG CD OE1 OE2
REMARK 470 LYS A 104 CG CD CE NZ
REMARK 470 ARG A 125 CD NE CZ NH1 NH2
REMARK 470 LEU A 132 CG CD1 CD2
REMARK 470 LYS A 134 CD CE NZ
REMARK 470 LYS A 137 CE NZ
REMARK 470 ILE A 138 CG1 CG2 CD1
REMARK 470 LYS A 139 CG CD CE NZ
REMARK 470 LYS A 142 CG CD CE NZ
REMARK 470 GLU A 165 CG CD OE1 OE2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ILE A 138 -74.61 -62.01
REMARK 500 SER A 140 -106.57 -82.25
REMARK 500 GLU A 141 -71.10 -156.25
REMARK 500 LYS A 158 19.11 58.46
REMARK 500 THR A 162 -68.79 62.47
REMARK 500
REMARK 500 REMARK: NULL
REMARK 610
REMARK 610 MISSING HETEROATOM
REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 610 I=INSERTION CODE):
REMARK 610 M RES C SSEQI
REMARK 610 RLT A 201
REMARK 610 QQ4 A 202
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MN A 203 MN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS A 41 NE2
REMARK 620 2 ASP A 108 OD2 92.8
REMARK 620 3 GLU A 119 OE1 167.9 82.0
REMARK 620 4 ILE A 120 O 74.6 85.4 94.0
REMARK 620 5 RLT A 201 OAG 82.5 167.7 104.7 104.1
REMARK 620 6 RLT A 201 OAH 91.0 101.4 100.8 164.4 67.5
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MN A 204 MN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU A 80 OE1
REMARK 620 2 ASP A 108 OD1 111.9
REMARK 620 3 RLT A 201 OAE 118.0 101.3
REMARK 620 N 1 2
DBREF 7LW6 A 1 50 UNP C6H0Y9 C6H0Y9_9INFA 1 50
DBREF 7LW6 A 73 196 UNP C6H0Y9 C6H0Y9_9INFA 73 196
SEQADV 7LW6 MET A -19 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 GLY A -18 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 SER A -17 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 SER A -16 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 HIS A -15 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 HIS A -14 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 HIS A -13 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 HIS A -12 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 HIS A -11 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 HIS A -10 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 SER A -9 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 SER A -8 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 GLY A -7 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 LEU A -6 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 VAL A -5 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 PRO A -4 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 ARG A -3 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 GLY A -2 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 SER A -1 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 HIS A 0 UNP C6H0Y9 EXPRESSION TAG
SEQADV 7LW6 THR A 38 UNP C6H0Y9 ILE 38 ENGINEERED MUTATION
SEQADV 7LW6 GLY A 51 UNP C6H0Y9 LINKER
SEQADV 7LW6 GLY A 52 UNP C6H0Y9 LINKER
SEQADV 7LW6 SER A 53 UNP C6H0Y9 LINKER
SEQRES 1 A 197 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY
SEQRES 2 A 197 LEU VAL PRO ARG GLY SER HIS MET GLU ASP PHE VAL ARG
SEQRES 3 A 197 GLN CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS
SEQRES 4 A 197 ALA MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR
SEQRES 5 A 197 ASN LYS PHE ALA ALA THR CYS THR HIS LEU GLU VAL CYS
SEQRES 6 A 197 PHE MET TYR SER ASP GLY GLY SER LYS HIS ARG PHE GLU
SEQRES 7 A 197 ILE ILE GLU GLY ARG ASP ARG ILE MET ALA TRP THR VAL
SEQRES 8 A 197 VAL ASN SER ILE CYS ASN THR THR GLY VAL GLU LYS PRO
SEQRES 9 A 197 LYS PHE LEU PRO ASP LEU TYR ASP TYR LYS GLU ASN ARG
SEQRES 10 A 197 PHE ILE GLU ILE GLY VAL THR ARG ARG GLU VAL HIS ILE
SEQRES 11 A 197 TYR TYR LEU GLU LYS ALA ASN LYS ILE LYS SER GLU LYS
SEQRES 12 A 197 THR HIS ILE HIS ILE PHE SER PHE THR GLY GLU GLU MET
SEQRES 13 A 197 ALA THR LYS ALA ASP TYR THR LEU ASP GLU GLU SER ARG
SEQRES 14 A 197 ALA ARG ILE LYS THR ARG LEU PHE THR ILE ARG GLN GLU
SEQRES 15 A 197 MET ALA SER ARG SER LEU TRP ASP SER PHE ARG GLN SER
SEQRES 16 A 197 GLU ARG
HET RLT A 201 24
HET QQ4 A 202 41
HET MN A 203 1
HET MN A 204 1
HET SO4 A 205 5
HETNAM RLT N-(4-FLUOROBENZYL)-5-HYDROXY-1-METHYL-2-(1-METHYL-1-
HETNAM 2 RLT {[(5-METHYL-1,3,4-OXADIAZOL-2-YL)
HETNAM 3 RLT CARBONYL]AMINO}ETHYL)-6-OXO-1,6-DI HYDROPYRIMIDINE-4-
HETNAM 4 RLT CARBOXAMIDE
HETNAM QQ4 HEXA VINYLPYRROLIDONE K15
HETNAM MN MANGANESE (II) ION
HETNAM SO4 SULFATE ION
HETSYN RLT RALTEGRAVIR, MK0518
HETSYN QQ4 1,1',1'',1''',1'''',1'''''-[(3R,5R,7R,9S,11R)-DODECANE-
HETSYN 2 QQ4 1,3,5,7,9,11-HEXAYL]HEXA(PYRROLIDIN-2-ONE)
FORMUL 2 RLT C20 H21 F N6 O5
FORMUL 3 QQ4 C36 H56 N6 O6
FORMUL 4 MN 2(MN 2+)
FORMUL 6 SO4 O4 S 2-
FORMUL 7 HOH *19(H2 O)
HELIX 1 AA1 SER A -1 PHE A 9 1 11
HELIX 2 AA2 ASN A 10 TYR A 24 1 15
HELIX 3 AA3 GLU A 31 ASP A 50 1 20
HELIX 4 AA4 ASP A 83 GLY A 99 1 17
HELIX 5 AA5 GLU A 126 LYS A 139 1 14
HELIX 6 AA6 LYS A 158 ASP A 160 5 3
HELIX 7 AA7 ASP A 164 ARG A 185 1 22
HELIX 8 AA8 LEU A 187 GLN A 193 1 7
SHEET 1 AA1 5 PHE A 76 ILE A 78 0
SHEET 2 AA1 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77
SHEET 3 AA1 5 ARG A 116 THR A 123 -1 O ARG A 116 N ASP A 111
SHEET 4 AA1 5 HIS A 144 SER A 149 1 O HIS A 144 N GLU A 119
SHEET 5 AA1 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147
LINK NE2 HIS A 41 MN MN A 203 1555 1555 2.38
LINK OE1 GLU A 80 MN MN A 204 1555 1555 2.30
LINK OD2 ASP A 108 MN MN A 203 1555 1555 2.42
LINK OD1 ASP A 108 MN MN A 204 1555 1555 1.92
LINK OE1 GLU A 119 MN MN A 203 1555 1555 2.53
LINK O ILE A 120 MN MN A 203 1555 1555 2.12
LINK OAG RLT A 201 MN MN A 203 1555 1555 2.78
LINK OAH RLT A 201 MN MN A 203 1555 1555 1.76
LINK OAE RLT A 201 MN MN A 204 1555 1555 1.90
CRYST1 89.515 89.515 133.802 90.00 90.00 90.00 I 4 2 2 16
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011171 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011171 0.000000 0.00000
SCALE3 0.000000 0.000000 0.007474 0.00000