HEADER HYDROLASE 03-MAR-21 7LXG TITLE HOMOCITRULLINATED BETA-LACTAMASE OXA-48 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: YHA IN THE SEQUENCE STANDS FOR HOMOCITRULLINE (HCIT), COMPND 7 A LYSINE MODIFICATION. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 573; SOURCE 4 GENE: BLA OXA-48, BLA_2, BLA_3, BLAOXA-48, G5637_27540, GJJ01_28680, SOURCE 5 KPE71T_00045, SAMEA3649466_05396, SAMEA3673128_05462, SOURCE 6 SAMEA3729780_05587; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HOMOCITRULLINE, OXA-48, BETA-LACTAMASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.E.SERRANO-NEGRON,D.T.KING,D.J.VOCADLO REVDAT 5 18-OCT-23 7LXG 1 REMARK REVDAT 4 13-JUL-22 7LXG 1 JRNL REVDAT 3 06-JUL-22 7LXG 1 JRNL REVDAT 2 29-JUN-22 7LXG 1 JRNL REVDAT 1 25-MAY-22 7LXG 0 JRNL AUTH D.T.KING,S.ZHU,D.B.HARDIE,J.E.SERRANO-NEGRON,Z.MADDEN, JRNL AUTH 2 S.KOLAPPAN,D.J.VOCADLO JRNL TITL CHEMOPROTEOMIC IDENTIFICATION OF CO 2 -DEPENDENT LYSINE JRNL TITL 2 CARBOXYLATION IN PROTEINS. JRNL REF NAT.CHEM.BIOL. V. 18 782 2022 JRNL REFN ESSN 1552-4469 JRNL PMID 35710617 JRNL DOI 10.1038/S41589-022-01043-1 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 33877 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1707 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.1220 - 5.0350 1.00 2775 157 0.1629 0.1931 REMARK 3 2 5.0350 - 3.9971 1.00 2707 144 0.1286 0.1604 REMARK 3 3 3.9971 - 3.4920 1.00 2691 145 0.1495 0.2094 REMARK 3 4 3.4920 - 3.1728 1.00 2740 98 0.1764 0.2311 REMARK 3 5 3.1728 - 2.9455 1.00 2665 131 0.1948 0.2294 REMARK 3 6 2.9455 - 2.7718 1.00 2691 130 0.1876 0.2789 REMARK 3 7 2.7718 - 2.6330 1.00 2672 150 0.1781 0.2747 REMARK 3 8 2.6330 - 2.5184 1.00 2659 153 0.1771 0.2397 REMARK 3 9 2.5184 - 2.4215 1.00 2641 147 0.1877 0.2502 REMARK 3 10 2.4215 - 2.3379 1.00 2666 125 0.2050 0.2648 REMARK 3 11 2.3379 - 2.2648 1.00 2651 172 0.2257 0.2838 REMARK 3 12 2.2648 - 2.2001 0.99 2612 155 0.2882 0.3603 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7LXG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1000255093. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33900 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 47.122 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 10.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.0800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4S2P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULPHATE, 0.1M BIS-TRIS REMARK 280 PH 5.5, 25% W/V PEG 3350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.35333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.67667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.35333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 18.67667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ARG A 2 REMARK 465 VAL A 3 REMARK 465 LEU A 4 REMARK 465 ALA A 5 REMARK 465 LEU A 6 REMARK 465 SER A 7 REMARK 465 ALA A 8 REMARK 465 VAL A 9 REMARK 465 PHE A 10 REMARK 465 LEU A 11 REMARK 465 VAL A 12 REMARK 465 ALA A 13 REMARK 465 SER A 14 REMARK 465 ILE A 15 REMARK 465 ILE A 16 REMARK 465 GLY A 17 REMARK 465 MET A 18 REMARK 465 PRO A 19 REMARK 465 ALA A 20 REMARK 465 VAL A 21 REMARK 465 ALA A 22 REMARK 465 LYS A 23 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 VAL B 3 REMARK 465 LEU B 4 REMARK 465 ALA B 5 REMARK 465 LEU B 6 REMARK 465 SER B 7 REMARK 465 ALA B 8 REMARK 465 VAL B 9 REMARK 465 PHE B 10 REMARK 465 LEU B 11 REMARK 465 VAL B 12 REMARK 465 ALA B 13 REMARK 465 SER B 14 REMARK 465 ILE B 15 REMARK 465 ILE B 16 REMARK 465 GLY B 17 REMARK 465 MET B 18 REMARK 465 PRO B 19 REMARK 465 ALA B 20 REMARK 465 VAL B 21 REMARK 465 ALA B 22 REMARK 465 LYS B 23 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS B 87 O HOH B 401 1.29 REMARK 500 O GLU A 24 HE22 GLN A 53 1.32 REMARK 500 HG SER A 70 O HOH A 403 1.53 REMARK 500 OD2 ASP A 229 HH TYR B 117 1.53 REMARK 500 HZ1 LYS A 60 O HOH A 402 1.58 REMARK 500 HZ1 LYS A 29 O HOH A 401 1.58 REMARK 500 NZ LYS A 29 O HOH A 401 1.84 REMARK 500 O HOH B 406 O HOH B 408 1.86 REMARK 500 NZ LYS B 87 O HOH B 401 1.92 REMARK 500 NZ LYS A 60 O HOH A 402 1.96 REMARK 500 O HOH B 483 O HOH B 520 1.98 REMARK 500 O HOH A 483 O HOH A 505 2.00 REMARK 500 O HOH B 411 O HOH B 504 2.04 REMARK 500 O HOH A 463 O HOH A 482 2.04 REMARK 500 O HOH B 444 O HOH B 485 2.05 REMARK 500 O HOH B 510 O HOH B 518 2.05 REMARK 500 OG SER A 70 O HOH A 403 2.07 REMARK 500 OG SER B 70 O HOH B 402 2.09 REMARK 500 O HOH A 442 O HOH B 504 2.09 REMARK 500 OD2 ASP A 202 O HOH A 404 2.10 REMARK 500 O GLU A 24 NE2 GLN A 53 2.16 REMARK 500 OD2 ASP B 230 O HOH B 403 2.19 REMARK 500 O4 SO4 B 301 O HOH B 404 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 412 O HOH B 450 4455 1.68 REMARK 500 O HOH A 410 O HOH B 437 6555 1.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 MET A 239 SD MET A 239 CE 0.380 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 YHA A 73 O - C - N ANGL. DEV. = 16.1 DEGREES REMARK 500 TRP A 221 CA - CB - CG ANGL. DEV. = 12.4 DEGREES REMARK 500 TRP B 221 CA - CB - CG ANGL. DEV. = 12.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 69 -141.81 55.43 REMARK 500 TRP A 95 140.83 -26.77 REMARK 500 ASN A 106 52.16 -94.94 REMARK 500 SER A 155 5.66 -156.92 REMARK 500 ASP A 159 23.94 -149.56 REMARK 500 ASN A 200 -166.91 -162.58 REMARK 500 MET A 241 63.96 -151.13 REMARK 500 ALA B 69 -137.30 49.10 REMARK 500 ASN B 106 46.81 -96.09 REMARK 500 GLU B 147 19.08 59.77 REMARK 500 SER B 155 6.04 -162.49 REMARK 500 ASP B 159 29.10 -150.28 REMARK 500 HIS B 182 57.36 -91.00 REMARK 500 REMARK 500 REMARK: NULL DBREF 7LXG A 1 265 UNP Q6XEC0 Q6XEC0_KLEPN 1 265 DBREF 7LXG B 1 265 UNP Q6XEC0 Q6XEC0_KLEPN 1 265 SEQADV 7LXG HIS A -15 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS A -14 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS A -13 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS A -12 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS A -11 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS A -10 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG SER A -9 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG SER A -8 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG GLY A -7 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG LEU A -6 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG VAL A -5 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG PRO A -4 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG ARG A -3 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG GLY A -2 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG SER A -1 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS A 0 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS B -15 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS B -14 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS B -13 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS B -12 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS B -11 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS B -10 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG SER B -9 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG SER B -8 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG GLY B -7 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG LEU B -6 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG VAL B -5 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG PRO B -4 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG ARG B -3 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG GLY B -2 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG SER B -1 UNP Q6XEC0 EXPRESSION TAG SEQADV 7LXG HIS B 0 UNP Q6XEC0 EXPRESSION TAG SEQRES 1 A 281 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 281 GLY SER HIS MET ARG VAL LEU ALA LEU SER ALA VAL PHE SEQRES 3 A 281 LEU VAL ALA SER ILE ILE GLY MET PRO ALA VAL ALA LYS SEQRES 4 A 281 GLU TRP GLN GLU ASN LYS SER TRP ASN ALA HIS PHE THR SEQRES 5 A 281 GLU HIS LYS SER GLN GLY VAL VAL VAL LEU TRP ASN GLU SEQRES 6 A 281 ASN LYS GLN GLN GLY PHE THR ASN ASN LEU LYS ARG ALA SEQRES 7 A 281 ASN GLN ALA PHE LEU PRO ALA SER THR PHE YHA ILE PRO SEQRES 8 A 281 ASN SER LEU ILE ALA LEU ASP LEU GLY VAL VAL LYS ASP SEQRES 9 A 281 GLU HIS GLN VAL PHE LYS TRP ASP GLY GLN THR ARG ASP SEQRES 10 A 281 ILE ALA THR TRP ASN ARG ASP HIS ASN LEU ILE THR ALA SEQRES 11 A 281 MET LYS TYR SER VAL VAL PRO VAL TYR GLN GLU PHE ALA SEQRES 12 A 281 ARG GLN ILE GLY GLU ALA ARG MET SER LYS MET LEU HIS SEQRES 13 A 281 ALA PHE ASP TYR GLY ASN GLU ASP ILE SER GLY ASN VAL SEQRES 14 A 281 ASP SER PHE TRP LEU ASP GLY GLY ILE ARG ILE SER ALA SEQRES 15 A 281 THR GLU GLN ILE SER PHE LEU ARG LYS LEU TYR HIS ASN SEQRES 16 A 281 LYS LEU HIS VAL SER GLU ARG SER GLN ARG ILE VAL LYS SEQRES 17 A 281 GLN ALA MET LEU THR GLU ALA ASN GLY ASP TYR ILE ILE SEQRES 18 A 281 ARG ALA LYS THR GLY TYR SER THR ARG ILE GLU PRO LYS SEQRES 19 A 281 ILE GLY TRP TRP VAL GLY TRP VAL GLU LEU ASP ASP ASN SEQRES 20 A 281 VAL TRP PHE PHE ALA MET ASN MET ASP MET PRO THR SER SEQRES 21 A 281 ASP GLY LEU GLY LEU ARG GLN ALA ILE THR LYS GLU VAL SEQRES 22 A 281 LEU LYS GLN GLU LYS ILE ILE PRO SEQRES 1 B 281 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 B 281 GLY SER HIS MET ARG VAL LEU ALA LEU SER ALA VAL PHE SEQRES 3 B 281 LEU VAL ALA SER ILE ILE GLY MET PRO ALA VAL ALA LYS SEQRES 4 B 281 GLU TRP GLN GLU ASN LYS SER TRP ASN ALA HIS PHE THR SEQRES 5 B 281 GLU HIS LYS SER GLN GLY VAL VAL VAL LEU TRP ASN GLU SEQRES 6 B 281 ASN LYS GLN GLN GLY PHE THR ASN ASN LEU LYS ARG ALA SEQRES 7 B 281 ASN GLN ALA PHE LEU PRO ALA SER THR PHE YHA ILE PRO SEQRES 8 B 281 ASN SER LEU ILE ALA LEU ASP LEU GLY VAL VAL LYS ASP SEQRES 9 B 281 GLU HIS GLN VAL PHE LYS TRP ASP GLY GLN THR ARG ASP SEQRES 10 B 281 ILE ALA THR TRP ASN ARG ASP HIS ASN LEU ILE THR ALA SEQRES 11 B 281 MET LYS TYR SER VAL VAL PRO VAL TYR GLN GLU PHE ALA SEQRES 12 B 281 ARG GLN ILE GLY GLU ALA ARG MET SER LYS MET LEU HIS SEQRES 13 B 281 ALA PHE ASP TYR GLY ASN GLU ASP ILE SER GLY ASN VAL SEQRES 14 B 281 ASP SER PHE TRP LEU ASP GLY GLY ILE ARG ILE SER ALA SEQRES 15 B 281 THR GLU GLN ILE SER PHE LEU ARG LYS LEU TYR HIS ASN SEQRES 16 B 281 LYS LEU HIS VAL SER GLU ARG SER GLN ARG ILE VAL LYS SEQRES 17 B 281 GLN ALA MET LEU THR GLU ALA ASN GLY ASP TYR ILE ILE SEQRES 18 B 281 ARG ALA LYS THR GLY TYR SER THR ARG ILE GLU PRO LYS SEQRES 19 B 281 ILE GLY TRP TRP VAL GLY TRP VAL GLU LEU ASP ASP ASN SEQRES 20 B 281 VAL TRP PHE PHE ALA MET ASN MET ASP MET PRO THR SER SEQRES 21 B 281 ASP GLY LEU GLY LEU ARG GLN ALA ILE THR LYS GLU VAL SEQRES 22 B 281 LEU LYS GLN GLU LYS ILE ILE PRO MODRES 7LXG YHA A 73 LYS MODIFIED RESIDUE MODRES 7LXG YHA B 73 LYS MODIFIED RESIDUE HET YHA A 73 25 HET YHA B 73 25 HET SO4 A 301 5 HET CL A 302 1 HET SO4 B 301 5 HETNAM YHA HOMOCITRULLINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETSYN YHA N~6~-CARBAMOYL-L-LYSINE FORMUL 1 YHA 2(C7 H15 N3 O3) FORMUL 3 SO4 2(O4 S 2-) FORMUL 4 CL CL 1- FORMUL 6 HOH *233(H2 O) HELIX 1 AA1 TRP A 31 HIS A 38 1 8 HELIX 2 AA2 ASN A 58 ASN A 63 1 6 HELIX 3 AA3 PRO A 68 THR A 71 5 4 HELIX 4 AA4 PHE A 72 LEU A 83 1 12 HELIX 5 AA5 ILE A 102 ASN A 106 5 5 HELIX 6 AA6 ASN A 110 TYR A 117 1 8 HELIX 7 AA7 VAL A 119 GLY A 131 1 13 HELIX 8 AA8 GLY A 131 ASP A 143 1 13 HELIX 9 AA9 SER A 155 GLY A 160 1 6 HELIX 10 AB1 ALA A 166 HIS A 178 1 13 HELIX 11 AB2 SER A 184 MET A 195 1 12 HELIX 12 AB3 THR A 243 LEU A 247 5 5 HELIX 13 AB4 GLY A 248 GLU A 261 1 14 HELIX 14 AB5 TRP B 31 HIS B 38 1 8 HELIX 15 AB6 ASN B 58 ASN B 63 1 6 HELIX 16 AB7 PRO B 68 THR B 71 5 4 HELIX 17 AB8 PHE B 72 LEU B 83 1 12 HELIX 18 AB9 ILE B 102 ASN B 106 5 5 HELIX 19 AC1 ASN B 110 TYR B 117 1 8 HELIX 20 AC2 VAL B 119 GLY B 131 1 13 HELIX 21 AC3 GLY B 131 PHE B 142 1 12 HELIX 22 AC4 SER B 155 GLY B 160 1 6 HELIX 23 AC5 ALA B 166 HIS B 178 1 13 HELIX 24 AC6 SER B 184 MET B 195 1 12 HELIX 25 AC7 THR B 243 LEU B 247 5 5 HELIX 26 AC8 GLY B 248 GLU B 261 1 14 SHEET 1 AA1 7 GLN A 26 GLU A 27 0 SHEET 2 AA1 7 GLN A 53 THR A 56 1 O THR A 56 N GLN A 26 SHEET 3 AA1 7 GLY A 42 ASN A 48 -1 N LEU A 46 O PHE A 55 SHEET 4 AA1 7 VAL A 232 ASP A 240 -1 O ASN A 238 N VAL A 43 SHEET 5 AA1 7 ILE A 219 GLU A 227 -1 N GLY A 224 O PHE A 235 SHEET 6 AA1 7 ILE A 204 SER A 212 -1 N GLY A 210 O TRP A 221 SHEET 7 AA1 7 LEU A 196 ALA A 199 -1 N GLU A 198 O ILE A 205 SHEET 1 AA2 2 ALA A 65 PHE A 66 0 SHEET 2 AA2 2 ILE A 164 SER A 165 -1 O ILE A 164 N PHE A 66 SHEET 1 AA3 7 TRP B 25 GLU B 27 0 SHEET 2 AA3 7 GLN B 53 THR B 56 1 O GLY B 54 N GLN B 26 SHEET 3 AA3 7 GLY B 42 ASN B 48 -1 N ASN B 48 O GLN B 53 SHEET 4 AA3 7 VAL B 232 ASP B 240 -1 O ASN B 238 N VAL B 43 SHEET 5 AA3 7 ILE B 219 GLU B 227 -1 N GLY B 220 O MET B 239 SHEET 6 AA3 7 ILE B 204 SER B 212 -1 N GLY B 210 O TRP B 221 SHEET 7 AA3 7 LEU B 196 ALA B 199 -1 N GLU B 198 O ILE B 205 SHEET 1 AA4 2 ALA B 65 PHE B 66 0 SHEET 2 AA4 2 ILE B 164 SER B 165 -1 O ILE B 164 N PHE B 66 LINK C PHE A 72 N YHA A 73 1555 1555 1.33 LINK C YHA A 73 N ILE A 74 1555 1555 1.33 LINK C PHE B 72 N YHA B 73 1555 1555 1.32 LINK C YHA B 73 N ILE B 74 1555 1555 1.34 CISPEP 1 GLU A 216 PRO A 217 0 -5.06 CISPEP 2 GLU B 216 PRO B 217 0 -2.92 CRYST1 143.960 143.960 56.030 90.00 90.00 120.00 P 62 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006946 0.004010 0.000000 0.00000 SCALE2 0.000000 0.008021 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017848 0.00000