HEADER VIRAL PROTEIN/IMMUNE SYSTEM 05-MAR-21 7LY3 TITLE CRYSTAL STRUCTURE OF SARS-COV-2 S NTD BOUND TO S2M28 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: S2M28 FAB HEAVY CHAIN; COMPND 7 CHAIN: D, F; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: S2M28 FAB LIGHT CHAIN; COMPND 11 CHAIN: C, E; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV, SARS-COV-2; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: S, 2; SOURCE 7 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 8 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 22 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS ANTIBODY, VIRAL PROTEIN, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL KEYWDS 2 GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, VIRAL PROTEIN-IMMUNE KEYWDS 3 SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.MCCALLUM,D.VEESLER,SEATTLE STRUCTURAL GENOMICS CENTER FOR AUTHOR 2 INFECTIOUS DISEASE (SSGCID) REVDAT 3 18-OCT-23 7LY3 1 REMARK REVDAT 2 12-MAY-21 7LY3 1 JRNL REVDAT 1 14-APR-21 7LY3 0 JRNL AUTH M.MCCALLUM,A.DE MARCO,F.A.LEMPP,M.A.TORTORICI,D.PINTO, JRNL AUTH 2 A.C.WALLS,M.BELTRAMELLO,A.CHEN,Z.LIU,F.ZATTA,S.ZEPEDA, JRNL AUTH 3 J.DI IULIO,J.E.BOWEN,M.MONTIEL-RUIZ,J.ZHOU,L.E.ROSEN, JRNL AUTH 4 S.BIANCHI,B.GUARINO,C.S.FREGNI,R.ABDELNABI,S.C.FOO, JRNL AUTH 5 P.W.ROTHLAUF,L.M.BLOYET,F.BENIGNI,E.CAMERONI,J.NEYTS,A.RIVA, JRNL AUTH 6 G.SNELL,A.TELENTI,S.P.J.WHELAN,H.W.VIRGIN,D.CORTI, JRNL AUTH 7 M.S.PIZZUTO,D.VEESLER JRNL TITL N-TERMINAL DOMAIN ANTIGENIC MAPPING REVEALS A SITE OF JRNL TITL 2 VULNERABILITY FOR SARS-COV-2. JRNL REF CELL V. 184 2332 2021 JRNL REFN ISSN 1097-4172 JRNL PMID 33761326 JRNL DOI 10.1016/J.CELL.2021.03.028 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.1_3865 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 62479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1185 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4200 - 6.0000 1.00 14601 144 0.2002 0.2466 REMARK 3 2 6.0000 - 4.7600 1.00 14616 150 0.1803 0.1814 REMARK 3 3 4.7600 - 4.1600 1.00 14632 147 0.1582 0.1693 REMARK 3 4 4.1600 - 3.7800 1.00 14701 146 0.2041 0.2438 REMARK 3 5 3.7800 - 3.5100 1.00 14515 151 0.2262 0.2418 REMARK 3 6 3.5100 - 3.3000 1.00 14623 150 0.2597 0.2887 REMARK 3 7 3.3000 - 3.1400 1.00 14678 148 0.3020 0.3459 REMARK 3 8 3.1400 - 3.0000 1.00 14568 149 0.3344 0.3521 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 83.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 93.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 12:29 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.661 -20.201 64.907 REMARK 3 T TENSOR REMARK 3 T11: 1.0734 T22: 0.4467 REMARK 3 T33: 0.7795 T12: 0.0337 REMARK 3 T13: 0.1055 T23: -0.1136 REMARK 3 L TENSOR REMARK 3 L11: 4.7682 L22: 1.0306 REMARK 3 L33: 8.8774 L12: -1.9022 REMARK 3 L13: -0.5554 L23: -1.3453 REMARK 3 S TENSOR REMARK 3 S11: -0.0364 S12: 0.3482 S13: -0.3192 REMARK 3 S21: 1.0246 S22: 0.2643 S23: 0.0922 REMARK 3 S31: 0.3444 S32: -1.0434 S33: -0.2568 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 11:29 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.710 39.463 64.853 REMARK 3 T TENSOR REMARK 3 T11: 1.4321 T22: 0.3801 REMARK 3 T33: 0.7863 T12: -0.0746 REMARK 3 T13: -0.0105 T23: 0.0608 REMARK 3 L TENSOR REMARK 3 L11: 6.2921 L22: 2.0277 REMARK 3 L33: 2.1146 L12: -1.9314 REMARK 3 L13: -2.7956 L23: 4.1786 REMARK 3 S TENSOR REMARK 3 S11: -0.2629 S12: -0.0008 S13: 0.1302 REMARK 3 S21: 0.6037 S22: 0.5423 S23: 0.6989 REMARK 3 S31: 0.0707 S32: 1.6916 S33: -0.2243 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 30:61 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.802 -3.249 92.862 REMARK 3 T TENSOR REMARK 3 T11: 1.3506 T22: 0.5506 REMARK 3 T33: 0.7432 T12: 0.0313 REMARK 3 T13: 0.1107 T23: -0.0168 REMARK 3 L TENSOR REMARK 3 L11: 6.9047 L22: 2.8234 REMARK 3 L33: 6.3677 L12: 1.2782 REMARK 3 L13: 1.2403 L23: 1.6502 REMARK 3 S TENSOR REMARK 3 S11: 0.3842 S12: -0.5559 S13: 0.5150 REMARK 3 S21: 0.4101 S22: -0.4285 S23: 0.3983 REMARK 3 S31: -0.2888 S32: -0.1188 S33: -0.0479 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 30:61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.331 24.701 91.568 REMARK 3 T TENSOR REMARK 3 T11: 1.4843 T22: 0.5382 REMARK 3 T33: 0.8105 T12: 0.0166 REMARK 3 T13: 0.2249 T23: -0.0395 REMARK 3 L TENSOR REMARK 3 L11: 5.8240 L22: 5.2491 REMARK 3 L33: 4.4609 L12: 0.4982 REMARK 3 L13: -1.0539 L23: -1.4597 REMARK 3 S TENSOR REMARK 3 S11: -0.2096 S12: 0.1193 S13: -0.9094 REMARK 3 S21: -0.1967 S22: 0.1433 S23: -0.2380 REMARK 3 S31: 0.6958 S32: -0.0956 S33: -0.0125 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 62:270 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.422 -8.898 69.972 REMARK 3 T TENSOR REMARK 3 T11: 0.8602 T22: 0.3808 REMARK 3 T33: 0.6484 T12: 0.1313 REMARK 3 T13: 0.0502 T23: -0.0227 REMARK 3 L TENSOR REMARK 3 L11: 3.2766 L22: 0.4731 REMARK 3 L33: 6.0622 L12: 1.0274 REMARK 3 L13: -0.7939 L23: 1.1038 REMARK 3 S TENSOR REMARK 3 S11: -0.0660 S12: 0.0316 S13: -0.2180 REMARK 3 S21: 0.3802 S22: 0.0457 S23: -0.1398 REMARK 3 S31: 0.7456 S32: 0.3695 S33: 0.0094 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN B AND RESID 62:270 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.998 29.495 68.517 REMARK 3 T TENSOR REMARK 3 T11: 0.8533 T22: 0.3236 REMARK 3 T33: 0.7641 T12: 0.0353 REMARK 3 T13: 0.0652 T23: -0.0273 REMARK 3 L TENSOR REMARK 3 L11: 2.2614 L22: 0.1194 REMARK 3 L33: 5.5287 L12: 0.6628 REMARK 3 L13: 0.2179 L23: -1.0368 REMARK 3 S TENSOR REMARK 3 S11: 0.0517 S12: 0.0111 S13: 0.1520 REMARK 3 S21: 0.4573 S22: -0.0359 S23: 0.3555 REMARK 3 S31: -0.5565 S32: -0.1167 S33: -0.0164 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 271:305 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.685 -4.693 100.008 REMARK 3 T TENSOR REMARK 3 T11: 1.7436 T22: 0.5898 REMARK 3 T33: 0.8490 T12: 0.0576 REMARK 3 T13: 0.1832 T23: -0.1302 REMARK 3 L TENSOR REMARK 3 L11: 5.1847 L22: 4.0468 REMARK 3 L33: 2.5868 L12: 1.3880 REMARK 3 L13: -2.3308 L23: -3.0100 REMARK 3 S TENSOR REMARK 3 S11: 0.4893 S12: -0.7241 S13: 0.7126 REMARK 3 S21: 1.3132 S22: -0.1720 S23: 0.5614 REMARK 3 S31: -0.7389 S32: 0.3253 S33: -0.3209 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN B AND RESID 271:303 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.802 26.027 98.608 REMARK 3 T TENSOR REMARK 3 T11: 1.7447 T22: 0.6174 REMARK 3 T33: 0.8793 T12: 0.0624 REMARK 3 T13: 0.2074 T23: 0.0609 REMARK 3 L TENSOR REMARK 3 L11: 1.6616 L22: 2.3941 REMARK 3 L33: 3.1630 L12: 0.5282 REMARK 3 L13: 0.0039 L23: 0.3882 REMARK 3 S TENSOR REMARK 3 S11: -0.0572 S12: -0.3283 S13: -0.3219 REMARK 3 S21: 1.0677 S22: 0.0983 S23: 0.2729 REMARK 3 S31: 0.3514 S32: -0.1752 S33: -0.0823 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN A AND RESID 1701:1702 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.846 -3.788 69.746 REMARK 3 T TENSOR REMARK 3 T11: 1.2952 T22: 1.2042 REMARK 3 T33: 1.1324 T12: 0.1455 REMARK 3 T13: 0.1522 T23: 0.1194 REMARK 3 L TENSOR REMARK 3 L11: 1.2249 L22: 3.2141 REMARK 3 L33: 1.7840 L12: 0.9834 REMARK 3 L13: 0.2251 L23: 1.3579 REMARK 3 S TENSOR REMARK 3 S11: -0.1884 S12: -0.4482 S13: -0.3715 REMARK 3 S21: 0.1673 S22: 0.0762 S23: -0.2472 REMARK 3 S31: -0.0555 S32: -0.2541 S33: 0.1268 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN B AND RESID 401:403 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.913 24.120 57.742 REMARK 3 T TENSOR REMARK 3 T11: 1.5315 T22: 1.0548 REMARK 3 T33: 1.0824 T12: 0.0979 REMARK 3 T13: 0.1403 T23: -0.0992 REMARK 3 L TENSOR REMARK 3 L11: 0.9860 L22: 1.3765 REMARK 3 L33: 2.4416 L12: -0.2101 REMARK 3 L13: 0.0574 L23: -1.3374 REMARK 3 S TENSOR REMARK 3 S11: -0.2390 S12: 0.1345 S13: -0.1332 REMARK 3 S21: 0.0839 S22: -0.1112 S23: 0.0299 REMARK 3 S31: 0.5971 S32: 0.3750 S33: 0.3295 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN C AND RESID 2:108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.077 -24.109 39.776 REMARK 3 T TENSOR REMARK 3 T11: 0.7865 T22: 1.2128 REMARK 3 T33: 0.8658 T12: 0.3710 REMARK 3 T13: -0.0678 T23: -0.3107 REMARK 3 L TENSOR REMARK 3 L11: 4.1841 L22: 1.2883 REMARK 3 L33: 4.6825 L12: 1.0099 REMARK 3 L13: -1.5131 L23: -0.3129 REMARK 3 S TENSOR REMARK 3 S11: 0.0367 S12: 0.0153 S13: -0.1586 REMARK 3 S21: 0.0409 S22: 0.2810 S23: -0.8591 REMARK 3 S31: 0.8003 S32: 1.4021 S33: -0.2973 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN E AND RESID 3:108 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.183 44.218 32.145 REMARK 3 T TENSOR REMARK 3 T11: 0.5634 T22: 0.6712 REMARK 3 T33: 0.6912 T12: 0.2142 REMARK 3 T13: 0.0350 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 3.7356 L22: 1.9191 REMARK 3 L33: 7.5635 L12: 1.3078 REMARK 3 L13: 0.4772 L23: -0.9861 REMARK 3 S TENSOR REMARK 3 S11: 0.1245 S12: 0.4269 S13: 0.3901 REMARK 3 S21: 0.1660 S22: 0.0249 S23: 0.6981 REMARK 3 S31: -0.8964 S32: -1.0768 S33: -0.1335 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ( CHAIN D AND RESID 1:119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.941 -26.501 37.678 REMARK 3 T TENSOR REMARK 3 T11: 0.7824 T22: 0.6565 REMARK 3 T33: 0.7329 T12: 0.1028 REMARK 3 T13: 0.1308 T23: -0.2472 REMARK 3 L TENSOR REMARK 3 L11: 3.8388 L22: 3.0940 REMARK 3 L33: 5.7692 L12: 0.0577 REMARK 3 L13: 0.2381 L23: 0.9058 REMARK 3 S TENSOR REMARK 3 S11: 0.0376 S12: 0.6252 S13: -0.5208 REMARK 3 S21: 0.6002 S22: -0.2047 S23: 0.3420 REMARK 3 S31: 0.9348 S32: -0.2128 S33: 0.1691 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: ( CHAIN F AND RESID 1:119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.662 45.332 37.246 REMARK 3 T TENSOR REMARK 3 T11: 0.6550 T22: 0.6736 REMARK 3 T33: 0.5590 T12: -0.0993 REMARK 3 T13: -0.1096 T23: 0.1191 REMARK 3 L TENSOR REMARK 3 L11: 5.7643 L22: 4.4836 REMARK 3 L33: 9.3823 L12: 0.8629 REMARK 3 L13: -0.9015 L23: -0.4264 REMARK 3 S TENSOR REMARK 3 S11: 0.0958 S12: 0.5460 S13: 0.4512 REMARK 3 S21: 0.4488 S22: -0.1635 S23: -0.3650 REMARK 3 S31: -0.9443 S32: 1.4489 S33: 0.0516 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: ( CHAIN C AND RESID 109:212 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.055 -23.714 1.323 REMARK 3 T TENSOR REMARK 3 T11: 0.4240 T22: 1.1153 REMARK 3 T33: 0.8954 T12: 0.0355 REMARK 3 T13: 0.0045 T23: -0.3278 REMARK 3 L TENSOR REMARK 3 L11: 5.1636 L22: 2.9620 REMARK 3 L33: 4.3991 L12: -0.8572 REMARK 3 L13: 1.4329 L23: -1.0911 REMARK 3 S TENSOR REMARK 3 S11: -0.4800 S12: -0.3662 S13: 0.4208 REMARK 3 S21: 0.0994 S22: 0.2471 S23: -0.0055 REMARK 3 S31: -0.1413 S32: -0.0400 S33: 0.2455 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: ( CHAIN E AND RESID 109:212 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.843 28.730 7.336 REMARK 3 T TENSOR REMARK 3 T11: 0.3971 T22: 1.2317 REMARK 3 T33: 0.7500 T12: 0.0587 REMARK 3 T13: -0.0403 T23: 0.1103 REMARK 3 L TENSOR REMARK 3 L11: 4.5340 L22: 4.4992 REMARK 3 L33: 3.4436 L12: -1.7758 REMARK 3 L13: -1.7792 L23: 0.9511 REMARK 3 S TENSOR REMARK 3 S11: -0.5239 S12: -0.6698 S13: -0.0175 REMARK 3 S21: 0.1717 S22: 0.4804 S23: -0.0263 REMARK 3 S31: 0.1452 S32: -0.0887 S33: 0.0623 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: ( CHAIN D AND RESID 120:221 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.432 -36.524 2.282 REMARK 3 T TENSOR REMARK 3 T11: 0.4305 T22: 1.2689 REMARK 3 T33: 0.8474 T12: 0.0483 REMARK 3 T13: 0.0159 T23: -0.2613 REMARK 3 L TENSOR REMARK 3 L11: 2.4578 L22: 5.4233 REMARK 3 L33: 3.3573 L12: 1.5122 REMARK 3 L13: 1.8569 L23: 0.6602 REMARK 3 S TENSOR REMARK 3 S11: -0.2641 S12: 0.0475 S13: -0.4520 REMARK 3 S21: -0.1312 S22: 0.2773 S23: -0.2499 REMARK 3 S31: 0.0927 S32: 0.1727 S33: 0.0191 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: ( CHAIN F AND RESID 120:221 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.501 36.175 -3.295 REMARK 3 T TENSOR REMARK 3 T11: 0.3971 T22: 1.1666 REMARK 3 T33: 0.7916 T12: -0.0147 REMARK 3 T13: 0.0109 T23: 0.0821 REMARK 3 L TENSOR REMARK 3 L11: 2.0586 L22: 3.8531 REMARK 3 L33: 6.8051 L12: -0.6026 REMARK 3 L13: -0.5666 L23: 0.7049 REMARK 3 S TENSOR REMARK 3 S11: -0.2336 S12: -0.0549 S13: 0.1803 REMARK 3 S21: -0.1875 S22: 0.3905 S23: -0.0235 REMARK 3 S31: -0.1342 S32: 0.1245 S33: -0.1463 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 12 THROUGH 40 OR REMARK 3 (RESID 41 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 42 REMARK 3 THROUGH 47 OR (RESID 48 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 49 THROUGH 70 OR RESID 74 REMARK 3 THROUGH 196 OR (RESID 197 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 198 THROUGH 303 OR RESID 1401 OR REMARK 3 RESID 1701 OR RESID 1725)) REMARK 3 SELECTION : (CHAIN B AND (RESID 12 THROUGH 31 OR REMARK 3 (RESID 32 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 33 REMARK 3 THROUGH 112 OR (RESID 113 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 114 THROUGH 149 OR (RESID 150 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 151 THROUGH 211 REMARK 3 OR (RESID 212 THROUGH 213 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 214 THROUGH 253 OR (RESID 254 REMARK 3 THROUGH 256 AND (NAME N OR NAME CA OR REMARK 3 NAME C OR NAME O OR NAME CB )) OR RESID REMARK 3 257 THROUGH 297 OR (RESID 298 AND (NAME N REMARK 3 OR NAME CA OR NAME C OR NAME O OR NAME CB REMARK 3 )) OR RESID 299 THROUGH 303 OR RESID 1315 REMARK 3 OR RESID 1614 OR RESID 1725)) REMARK 3 ATOM PAIRS NUMBER : 0 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN C AND ((RESID 3 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 4 THROUGH 79 OR (RESID 80 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 81 THROUGH 157 OR REMARK 3 (RESID 158 THROUGH 159 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 160 THROUGH 212)) REMARK 3 SELECTION : (CHAIN E AND (RESID 3 THROUGH 56 OR REMARK 3 (RESID 57 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 58 OR REMARK 3 (RESID 59 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 60 REMARK 3 THROUGH 61 OR (RESID 62 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 63 THROUGH 103 OR (RESID 104 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 105 THROUGH 115 OR REMARK 3 (RESID 116 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 117 REMARK 3 THROUGH 150 OR (RESID 151 THROUGH 152 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 153 OR (RESID 154 AND REMARK 3 (NAME N OR NAME CA OR NAME C OR NAME O OR REMARK 3 NAME CB )) OR RESID 155 THROUGH 190 OR REMARK 3 (RESID 191 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 192 REMARK 3 THROUGH 212)) REMARK 3 ATOM PAIRS NUMBER : 1834 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN D AND (RESID 1 THROUGH 217 OR REMARK 3 (RESID 218 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 219 OR REMARK 3 (RESID 220 THROUGH 221 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB ))) REMARK 3 ) REMARK 3 SELECTION : (CHAIN F AND (RESID 1 THROUGH 64 OR REMARK 3 (RESID 65 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 66 REMARK 3 THROUGH 220 OR (RESID 221 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB ))) REMARK 3 ) REMARK 3 ATOM PAIRS NUMBER : 1968 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7LY3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1000254021. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-SEP-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.75 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97741 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62479 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 49.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.390 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB 7LY2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MM HEPES-HCL PH 8.0 750 MM NACL 0.1 REMARK 280 M AMMONIUM SULFATE 0.05 M SODIUM CITRATE PH 4.75 12.5 % PEG4000, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.22200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 182.97300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 62.72850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 182.97300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.22200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 62.72850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D, C, G, H, I, J, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F, L, M, N, O REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -18 REMARK 465 GLY A -17 REMARK 465 ILE A -16 REMARK 465 LEU A -15 REMARK 465 PRO A -14 REMARK 465 SER A -13 REMARK 465 PRO A -12 REMARK 465 GLY A -11 REMARK 465 MET A -10 REMARK 465 PRO A -9 REMARK 465 ALA A -8 REMARK 465 LEU A -7 REMARK 465 LEU A -6 REMARK 465 SER A -5 REMARK 465 LEU A -4 REMARK 465 VAL A -3 REMARK 465 SER A -2 REMARK 465 LEU A -1 REMARK 465 LEU A 0 REMARK 465 SER A 1 REMARK 465 VAL A 2 REMARK 465 LEU A 3 REMARK 465 LEU A 4 REMARK 465 MET A 5 REMARK 465 GLY A 6 REMARK 465 CYS A 7 REMARK 465 VAL A 8 REMARK 465 ALA A 9 REMARK 465 GLU A 10 REMARK 465 THR A 11 REMARK 465 GLY A 72 REMARK 465 THR A 73 REMARK 465 LEU A 179 REMARK 465 GLU A 180 REMARK 465 GLY A 181 REMARK 465 LYS A 182 REMARK 465 GLN A 183 REMARK 465 GLY A 184 REMARK 465 ASN A 185 REMARK 465 PHE A 186 REMARK 465 PHE A 306 REMARK 465 THR A 307 REMARK 465 ALA A 308 REMARK 465 HIS A 309 REMARK 465 HIS A 310 REMARK 465 HIS A 311 REMARK 465 HIS A 312 REMARK 465 HIS A 313 REMARK 465 HIS A 314 REMARK 465 HIS A 315 REMARK 465 HIS A 316 REMARK 465 MET B -18 REMARK 465 GLY B -17 REMARK 465 ILE B -16 REMARK 465 LEU B -15 REMARK 465 PRO B -14 REMARK 465 SER B -13 REMARK 465 PRO B -12 REMARK 465 GLY B -11 REMARK 465 MET B -10 REMARK 465 PRO B -9 REMARK 465 ALA B -8 REMARK 465 LEU B -7 REMARK 465 LEU B -6 REMARK 465 SER B -5 REMARK 465 LEU B -4 REMARK 465 VAL B -3 REMARK 465 SER B -2 REMARK 465 LEU B -1 REMARK 465 LEU B 0 REMARK 465 SER B 1 REMARK 465 VAL B 2 REMARK 465 LEU B 3 REMARK 465 LEU B 4 REMARK 465 MET B 5 REMARK 465 GLY B 6 REMARK 465 CYS B 7 REMARK 465 VAL B 8 REMARK 465 ALA B 9 REMARK 465 GLU B 10 REMARK 465 SER B 71 REMARK 465 GLY B 72 REMARK 465 THR B 73 REMARK 465 LEU B 179 REMARK 465 GLU B 180 REMARK 465 GLY B 181 REMARK 465 LYS B 182 REMARK 465 GLN B 183 REMARK 465 GLY B 184 REMARK 465 ASN B 185 REMARK 465 PHE B 186 REMARK 465 LYS B 304 REMARK 465 SER B 305 REMARK 465 PHE B 306 REMARK 465 THR B 307 REMARK 465 ALA B 308 REMARK 465 HIS B 309 REMARK 465 HIS B 310 REMARK 465 HIS B 311 REMARK 465 HIS B 312 REMARK 465 HIS B 313 REMARK 465 HIS B 314 REMARK 465 HIS B 315 REMARK 465 HIS B 316 REMARK 465 SER C 1 REMARK 465 SER E 1 REMARK 465 TYR E 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 14 CG CD OE1 NE2 REMARK 470 ARG A 21 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 32 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 41 CD CE NZ REMARK 470 ASN A 74 CG OD1 ND2 REMARK 470 ARG A 78 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 96 CG CD OE1 OE2 REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 SER A 98 OG REMARK 470 LYS A 113 CG CD CE NZ REMARK 470 LYS A 150 CG CD CE NZ REMARK 470 LYS A 187 CG CD CE NZ REMARK 470 ASN A 188 CG OD1 ND2 REMARK 470 ASN A 211 CG OD1 ND2 REMARK 470 LEU A 212 CG CD1 CD2 REMARK 470 VAL A 213 CG1 CG2 REMARK 470 SER A 254 OG REMARK 470 SER A 255 OG REMARK 470 SER A 256 OG REMARK 470 THR A 259 OG1 CG2 REMARK 470 GLU A 298 CG CD OE1 OE2 REMARK 470 SER A 305 OG REMARK 470 GLN B 14 CG CD OE1 NE2 REMARK 470 ARG B 21 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 41 CG CD CE NZ REMARK 470 LEU B 48 CG CD1 CD2 REMARK 470 ASN B 74 CG OD1 ND2 REMARK 470 ARG B 78 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 96 CG CD OE1 OE2 REMARK 470 LYS B 97 CG CD CE NZ REMARK 470 SER B 98 OG REMARK 470 LYS B 187 CG CD CE NZ REMARK 470 ASN B 188 CG OD1 ND2 REMARK 470 ILE B 197 CG1 CG2 CD1 REMARK 470 ASN B 211 CG OD1 ND2 REMARK 470 VAL B 213 CG1 CG2 REMARK 470 SER B 256 OG REMARK 470 THR B 259 OG1 CG2 REMARK 470 GLU D 1 CG CD OE1 OE2 REMARK 470 LYS D 43 CG CD CE NZ REMARK 470 LYS D 65 CG CD CE NZ REMARK 470 GLN D 111 CG CD OE1 NE2 REMARK 470 LYS D 207 CG CD CE NZ REMARK 470 SER D 221 OG REMARK 470 TYR C 2 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE C 57 CG1 CG2 CD1 REMARK 470 GLU C 59 CG CD OE1 OE2 REMARK 470 SER C 62 OG REMARK 470 LYS C 104 CG CD CE NZ REMARK 470 SER C 116 OG REMARK 470 LYS C 151 CG CD CE NZ REMARK 470 SER C 154 OG REMARK 470 LYS C 168 CG CD CE NZ REMARK 470 ARG C 191 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 212 CG CD OE1 OE2 REMARK 470 GLU E 3 CG CD OE1 OE2 REMARK 470 GLU E 80 CG CD OE1 OE2 REMARK 470 LYS E 158 CG CD CE NZ REMARK 470 LYS E 168 CG CD CE NZ REMARK 470 GLU E 212 CG CD OE1 OE2 REMARK 470 GLU F 1 CG CD OE1 OE2 REMARK 470 LYS F 43 CG CD CE NZ REMARK 470 GLN F 111 CG CD OE1 NE2 REMARK 470 LYS F 207 CG CD CE NZ REMARK 470 GLU F 218 CG CD OE1 OE2 REMARK 470 LYS F 220 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O GLN C 128 NZ LYS C 173 4445 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 32 -119.41 48.79 REMARK 500 ASP A 53 -167.47 -164.84 REMARK 500 PRO A 57 151.06 -46.51 REMARK 500 ASN A 87 -132.91 53.63 REMARK 500 THR A 108 -82.29 -114.67 REMARK 500 SER A 155 -70.50 -101.87 REMARK 500 SER A 172 -159.06 -156.30 REMARK 500 PHE B 32 -117.95 46.34 REMARK 500 ASP B 80 89.82 -154.92 REMARK 500 ASN B 87 -140.99 51.95 REMARK 500 THR B 108 -79.45 -119.83 REMARK 500 SER B 155 -78.03 -98.06 REMARK 500 VAL B 213 -52.71 -121.47 REMARK 500 LEU B 226 -60.44 -97.45 REMARK 500 LYS D 43 -168.91 -125.38 REMARK 500 ASP D 150 62.68 61.56 REMARK 500 ASP C 50 -48.47 69.19 REMARK 500 SER C 66 96.81 -169.24 REMARK 500 ASP C 153 -118.33 52.66 REMARK 500 ASP E 50 -48.29 69.14 REMARK 500 SER E 66 97.94 -164.98 REMARK 500 ASP E 153 -118.16 52.95 REMARK 500 LYS F 43 -169.22 -125.43 REMARK 500 ASP F 150 62.65 62.19 REMARK 500 REMARK 500 REMARK: NULL DBREF 7LY3 A 14 307 UNP P0DTC2 SPIKE_SARS2 14 307 DBREF 7LY3 B 14 307 UNP P0DTC2 SPIKE_SARS2 14 307 DBREF 7LY3 D 1 221 PDB 7LY3 7LY3 1 221 DBREF 7LY3 C 1 212 PDB 7LY3 7LY3 1 212 DBREF 7LY3 E 1 212 PDB 7LY3 7LY3 1 212 DBREF 7LY3 F 1 221 PDB 7LY3 7LY3 1 221 SEQADV 7LY3 MET A -18 UNP P0DTC2 INITIATING METHIONINE SEQADV 7LY3 GLY A -17 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 ILE A -16 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU A -15 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 PRO A -14 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 SER A -13 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 PRO A -12 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 GLY A -11 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 MET A -10 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 PRO A -9 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 ALA A -8 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU A -7 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU A -6 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 SER A -5 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU A -4 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 VAL A -3 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 SER A -2 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU A -1 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU A 0 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 SER A 1 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 VAL A 2 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU A 3 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU A 4 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 MET A 5 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 GLY A 6 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 CYS A 7 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 VAL A 8 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 ALA A 9 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 GLU A 10 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 THR A 11 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 GLY A 12 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 THR A 13 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 ALA A 303 UNP P0DTC2 LEU 303 CONFLICT SEQADV 7LY3 ALA A 308 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS A 309 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS A 310 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS A 311 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS A 312 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS A 313 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS A 314 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS A 315 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS A 316 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 MET B -18 UNP P0DTC2 INITIATING METHIONINE SEQADV 7LY3 GLY B -17 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 ILE B -16 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU B -15 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 PRO B -14 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 SER B -13 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 PRO B -12 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 GLY B -11 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 MET B -10 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 PRO B -9 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 ALA B -8 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU B -7 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU B -6 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 SER B -5 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU B -4 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 VAL B -3 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 SER B -2 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU B -1 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU B 0 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 SER B 1 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 VAL B 2 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU B 3 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 LEU B 4 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 MET B 5 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 GLY B 6 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 CYS B 7 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 VAL B 8 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 ALA B 9 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 GLU B 10 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 THR B 11 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 GLY B 12 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 THR B 13 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 ALA B 303 UNP P0DTC2 LEU 303 CONFLICT SEQADV 7LY3 ALA B 308 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS B 309 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS B 310 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS B 311 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS B 312 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS B 313 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS B 314 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS B 315 UNP P0DTC2 EXPRESSION TAG SEQADV 7LY3 HIS B 316 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 335 MET GLY ILE LEU PRO SER PRO GLY MET PRO ALA LEU LEU SEQRES 2 A 335 SER LEU VAL SER LEU LEU SER VAL LEU LEU MET GLY CYS SEQRES 3 A 335 VAL ALA GLU THR GLY THR GLN CYS VAL ASN LEU THR THR SEQRES 4 A 335 ARG THR GLN LEU PRO PRO ALA TYR THR ASN SER PHE THR SEQRES 5 A 335 ARG GLY VAL TYR TYR PRO ASP LYS VAL PHE ARG SER SER SEQRES 6 A 335 VAL LEU HIS SER THR GLN ASP LEU PHE LEU PRO PHE PHE SEQRES 7 A 335 SER ASN VAL THR TRP PHE HIS ALA ILE HIS VAL SER GLY SEQRES 8 A 335 THR ASN GLY THR LYS ARG PHE ASP ASN PRO VAL LEU PRO SEQRES 9 A 335 PHE ASN ASP GLY VAL TYR PHE ALA SER THR GLU LYS SER SEQRES 10 A 335 ASN ILE ILE ARG GLY TRP ILE PHE GLY THR THR LEU ASP SEQRES 11 A 335 SER LYS THR GLN SER LEU LEU ILE VAL ASN ASN ALA THR SEQRES 12 A 335 ASN VAL VAL ILE LYS VAL CYS GLU PHE GLN PHE CYS ASN SEQRES 13 A 335 ASP PRO PHE LEU GLY VAL TYR TYR HIS LYS ASN ASN LYS SEQRES 14 A 335 SER TRP MET GLU SER GLU PHE ARG VAL TYR SER SER ALA SEQRES 15 A 335 ASN ASN CYS THR PHE GLU TYR VAL SER GLN PRO PHE LEU SEQRES 16 A 335 MET ASP LEU GLU GLY LYS GLN GLY ASN PHE LYS ASN LEU SEQRES 17 A 335 ARG GLU PHE VAL PHE LYS ASN ILE ASP GLY TYR PHE LYS SEQRES 18 A 335 ILE TYR SER LYS HIS THR PRO ILE ASN LEU VAL ARG ASP SEQRES 19 A 335 LEU PRO GLN GLY PHE SER ALA LEU GLU PRO LEU VAL ASP SEQRES 20 A 335 LEU PRO ILE GLY ILE ASN ILE THR ARG PHE GLN THR LEU SEQRES 21 A 335 LEU ALA LEU HIS ARG SER TYR LEU THR PRO GLY ASP SER SEQRES 22 A 335 SER SER GLY TRP THR ALA GLY ALA ALA ALA TYR TYR VAL SEQRES 23 A 335 GLY TYR LEU GLN PRO ARG THR PHE LEU LEU LYS TYR ASN SEQRES 24 A 335 GLU ASN GLY THR ILE THR ASP ALA VAL ASP CYS ALA LEU SEQRES 25 A 335 ASP PRO LEU SER GLU THR LYS CYS THR ALA LYS SER PHE SEQRES 26 A 335 THR ALA HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 B 335 MET GLY ILE LEU PRO SER PRO GLY MET PRO ALA LEU LEU SEQRES 2 B 335 SER LEU VAL SER LEU LEU SER VAL LEU LEU MET GLY CYS SEQRES 3 B 335 VAL ALA GLU THR GLY THR GLN CYS VAL ASN LEU THR THR SEQRES 4 B 335 ARG THR GLN LEU PRO PRO ALA TYR THR ASN SER PHE THR SEQRES 5 B 335 ARG GLY VAL TYR TYR PRO ASP LYS VAL PHE ARG SER SER SEQRES 6 B 335 VAL LEU HIS SER THR GLN ASP LEU PHE LEU PRO PHE PHE SEQRES 7 B 335 SER ASN VAL THR TRP PHE HIS ALA ILE HIS VAL SER GLY SEQRES 8 B 335 THR ASN GLY THR LYS ARG PHE ASP ASN PRO VAL LEU PRO SEQRES 9 B 335 PHE ASN ASP GLY VAL TYR PHE ALA SER THR GLU LYS SER SEQRES 10 B 335 ASN ILE ILE ARG GLY TRP ILE PHE GLY THR THR LEU ASP SEQRES 11 B 335 SER LYS THR GLN SER LEU LEU ILE VAL ASN ASN ALA THR SEQRES 12 B 335 ASN VAL VAL ILE LYS VAL CYS GLU PHE GLN PHE CYS ASN SEQRES 13 B 335 ASP PRO PHE LEU GLY VAL TYR TYR HIS LYS ASN ASN LYS SEQRES 14 B 335 SER TRP MET GLU SER GLU PHE ARG VAL TYR SER SER ALA SEQRES 15 B 335 ASN ASN CYS THR PHE GLU TYR VAL SER GLN PRO PHE LEU SEQRES 16 B 335 MET ASP LEU GLU GLY LYS GLN GLY ASN PHE LYS ASN LEU SEQRES 17 B 335 ARG GLU PHE VAL PHE LYS ASN ILE ASP GLY TYR PHE LYS SEQRES 18 B 335 ILE TYR SER LYS HIS THR PRO ILE ASN LEU VAL ARG ASP SEQRES 19 B 335 LEU PRO GLN GLY PHE SER ALA LEU GLU PRO LEU VAL ASP SEQRES 20 B 335 LEU PRO ILE GLY ILE ASN ILE THR ARG PHE GLN THR LEU SEQRES 21 B 335 LEU ALA LEU HIS ARG SER TYR LEU THR PRO GLY ASP SER SEQRES 22 B 335 SER SER GLY TRP THR ALA GLY ALA ALA ALA TYR TYR VAL SEQRES 23 B 335 GLY TYR LEU GLN PRO ARG THR PHE LEU LEU LYS TYR ASN SEQRES 24 B 335 GLU ASN GLY THR ILE THR ASP ALA VAL ASP CYS ALA LEU SEQRES 25 B 335 ASP PRO LEU SER GLU THR LYS CYS THR ALA LYS SER PHE SEQRES 26 B 335 THR ALA HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 1 D 221 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 D 221 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 D 221 PHE THR PHE SER SER TYR GLY MET HIS TRP VAL ARG GLN SEQRES 4 D 221 ALA PRO GLY LYS GLY LEU GLU TRP VAL THR VAL ILE TRP SEQRES 5 D 221 TYR ASP GLY SER ASN ARG TYR TYR ALA ASP SER VAL LYS SEQRES 6 D 221 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 D 221 LEU TYR LEU GLN MET ASP SER LEU ARG ALA GLU ASP THR SEQRES 8 D 221 ALA VAL TYR TYR CYS ALA ARG ALA VAL ALA GLY GLU TRP SEQRES 9 D 221 TYR PHE ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SEQRES 10 D 221 SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU SEQRES 11 D 221 ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA SEQRES 12 D 221 LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL SEQRES 13 D 221 THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL SEQRES 14 D 221 HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SEQRES 15 D 221 SER LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU SEQRES 16 D 221 GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SEQRES 17 D 221 SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER SEQRES 1 C 212 SER TYR GLU LEU THR GLN PRO PRO SER VAL SER VAL SER SEQRES 2 C 212 PRO GLY GLN THR ALA ARG ILE THR CYS SER GLY ASP ALA SEQRES 3 C 212 LEU ALA LYS HIS TYR ALA TYR TRP TYR ARG GLN LYS PRO SEQRES 4 C 212 GLY GLN ALA PRO VAL LEU VAL ILE TYR LYS ASP SER GLU SEQRES 5 C 212 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER SER SEQRES 6 C 212 SER GLY THR THR VAL THR LEU THR ILE SER GLY VAL GLN SEQRES 7 C 212 ALA GLU ASP GLU ALA ASP TYR TYR CYS GLN SER ALA ASP SEQRES 8 C 212 SER ILE GLY SER SER TRP VAL PHE GLY GLY GLY THR LYS SEQRES 9 C 212 LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SER VAL SEQRES 10 C 212 THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA ASN SEQRES 11 C 212 LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR PRO SEQRES 12 C 212 GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SER PRO SEQRES 13 C 212 VAL LYS ALA GLY VAL GLU THR THR THR PRO SER LYS GLN SEQRES 14 C 212 SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER LEU SEQRES 15 C 212 THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER CYS SEQRES 16 C 212 GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS THR VAL SEQRES 17 C 212 ALA PRO THR GLU SEQRES 1 E 212 SER TYR GLU LEU THR GLN PRO PRO SER VAL SER VAL SER SEQRES 2 E 212 PRO GLY GLN THR ALA ARG ILE THR CYS SER GLY ASP ALA SEQRES 3 E 212 LEU ALA LYS HIS TYR ALA TYR TRP TYR ARG GLN LYS PRO SEQRES 4 E 212 GLY GLN ALA PRO VAL LEU VAL ILE TYR LYS ASP SER GLU SEQRES 5 E 212 ARG PRO SER GLY ILE PRO GLU ARG PHE SER GLY SER SER SEQRES 6 E 212 SER GLY THR THR VAL THR LEU THR ILE SER GLY VAL GLN SEQRES 7 E 212 ALA GLU ASP GLU ALA ASP TYR TYR CYS GLN SER ALA ASP SEQRES 8 E 212 SER ILE GLY SER SER TRP VAL PHE GLY GLY GLY THR LYS SEQRES 9 E 212 LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SER VAL SEQRES 10 E 212 THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA ASN SEQRES 11 E 212 LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR PRO SEQRES 12 E 212 GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SER PRO SEQRES 13 E 212 VAL LYS ALA GLY VAL GLU THR THR THR PRO SER LYS GLN SEQRES 14 E 212 SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER LEU SEQRES 15 E 212 THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER CYS SEQRES 16 E 212 GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS THR VAL SEQRES 17 E 212 ALA PRO THR GLU SEQRES 1 F 221 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY VAL VAL GLN SEQRES 2 F 221 PRO GLY ARG SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 F 221 PHE THR PHE SER SER TYR GLY MET HIS TRP VAL ARG GLN SEQRES 4 F 221 ALA PRO GLY LYS GLY LEU GLU TRP VAL THR VAL ILE TRP SEQRES 5 F 221 TYR ASP GLY SER ASN ARG TYR TYR ALA ASP SER VAL LYS SEQRES 6 F 221 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 F 221 LEU TYR LEU GLN MET ASP SER LEU ARG ALA GLU ASP THR SEQRES 8 F 221 ALA VAL TYR TYR CYS ALA ARG ALA VAL ALA GLY GLU TRP SEQRES 9 F 221 TYR PHE ASP TYR TRP GLY GLN GLY THR LEU VAL THR VAL SEQRES 10 F 221 SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU SEQRES 11 F 221 ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA SEQRES 12 F 221 LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL SEQRES 13 F 221 THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL SEQRES 14 F 221 HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SEQRES 15 F 221 SER LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU SEQRES 16 F 221 GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SEQRES 17 F 221 SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET FUC G 4 10 HET NAG H 1 14 HET FUC H 2 10 HET NAG I 1 14 HET NAG I 2 14 HET BMA I 3 11 HET FUC I 4 10 HET NAG J 1 14 HET FUC J 2 10 HET NAG K 1 14 HET NAG K 2 14 HET BMA K 3 11 HET MAN K 4 11 HET FUC K 5 10 HET NAG L 1 14 HET NAG L 2 14 HET BMA L 3 11 HET MAN L 4 11 HET FUC L 5 10 HET NAG M 1 14 HET NAG M 2 14 HET BMA M 3 11 HET FUC M 4 10 HET NAG N 1 14 HET FUC N 2 10 HET NAG O 1 14 HET FUC O 2 10 HET NAG A1701 14 HET NAG A1702 14 HET UNX A1703 1 HET XYL A1704 10 HET NAG B 401 14 HET NAG B 402 14 HET NAG B 403 14 HET UNX B 404 1 HET XYL B 405 10 HET SO4 D 301 5 HET SO4 F 301 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM UNX UNKNOWN ATOM OR ION HETNAM XYL XYLITOL HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN XYL D-XYLITOL FORMUL 7 NAG 19(C8 H15 N O6) FORMUL 7 BMA 5(C6 H12 O6) FORMUL 7 FUC 9(C6 H12 O5) FORMUL 11 MAN 2(C6 H12 O6) FORMUL 18 UNX 2(X) FORMUL 19 XYL 2(C5 H12 O5) FORMUL 25 SO4 2(O4 S 2-) HELIX 1 AA1 SER A 247 THR A 250 5 4 HELIX 2 AA2 THR A 259 ALA A 262 5 4 HELIX 3 AA3 ASP A 294 LYS A 304 1 11 HELIX 4 AA4 SER B 247 THR B 250 5 4 HELIX 5 AA5 THR B 259 ALA B 262 5 4 HELIX 6 AA6 ASP B 294 ALA B 303 1 10 HELIX 7 AA7 THR D 28 TYR D 32 5 5 HELIX 8 AA8 ASN D 74 LYS D 76 5 3 HELIX 9 AA9 ARG D 87 THR D 91 5 5 HELIX 10 AB1 SER D 162 ALA D 164 5 3 HELIX 11 AB2 SER D 193 LEU D 195 5 3 HELIX 12 AB3 LYS D 207 ASN D 210 5 4 HELIX 13 AB4 ASP C 25 LYS C 29 5 5 HELIX 14 AB5 GLN C 78 GLU C 82 5 5 HELIX 15 AB6 SER C 123 ALA C 129 1 7 HELIX 16 AB7 THR C 183 HIS C 190 1 8 HELIX 17 AB8 ASP E 25 HIS E 30 1 6 HELIX 18 AB9 GLN E 78 GLU E 82 5 5 HELIX 19 AC1 SER E 123 ALA E 129 1 7 HELIX 20 AC2 THR E 183 HIS E 190 1 8 HELIX 21 AC3 THR F 28 TYR F 32 5 5 HELIX 22 AC4 ASP F 62 LYS F 65 5 4 HELIX 23 AC5 ASN F 74 LYS F 76 5 3 HELIX 24 AC6 ARG F 87 THR F 91 5 5 HELIX 25 AC7 SER F 162 ALA F 164 5 3 HELIX 26 AC8 SER F 193 LEU F 195 5 3 HELIX 27 AC9 LYS F 207 ASN F 210 5 4 SHEET 1 AA1 7 ALA A 27 ASN A 30 0 SHEET 2 AA1 7 ASN A 61 HIS A 66 -1 O TRP A 64 N ALA A 27 SHEET 3 AA1 7 ALA A 264 TYR A 269 -1 O TYR A 265 N PHE A 65 SHEET 4 AA1 7 VAL A 90 THR A 95 -1 N ALA A 93 O TYR A 266 SHEET 5 AA1 7 ASN A 188 ILE A 197 -1 O PHE A 192 N PHE A 92 SHEET 6 AA1 7 TYR A 200 PRO A 209 -1 O THR A 208 N LEU A 189 SHEET 7 AA1 7 GLU A 224 LEU A 229 -1 O LEU A 226 N ILE A 203 SHEET 1 AA2 3 VAL A 47 PHE A 55 0 SHEET 2 AA2 3 GLN A 271 TYR A 279 -1 O TYR A 279 N VAL A 47 SHEET 3 AA2 3 ILE A 285 ASP A 290 -1 O ASP A 287 N LYS A 278 SHEET 1 AA3 2 ILE A 68 VAL A 70 0 SHEET 2 AA3 2 LYS A 77 PHE A 79 -1 O ARG A 78 N HIS A 69 SHEET 1 AA4 8 VAL A 83 PRO A 85 0 SHEET 2 AA4 8 ARG A 237 HIS A 245 -1 O PHE A 238 N LEU A 84 SHEET 3 AA4 8 VAL A 126 HIS A 146 1 N LEU A 141 O LEU A 242 SHEET 4 AA4 8 SER A 151 SER A 172 -1 O SER A 161 N GLN A 134 SHEET 5 AA4 8 SER B 151 SER B 172 -1 O GLU B 169 N GLU A 169 SHEET 6 AA4 8 VAL B 126 HIS B 146 -1 N CYS B 136 O VAL B 159 SHEET 7 AA4 8 ARG B 237 HIS B 245 1 O LEU B 244 N LEU B 141 SHEET 8 AA4 8 VAL B 83 PRO B 85 -1 N LEU B 84 O PHE B 238 SHEET 1 AA5 7 VAL A 83 PRO A 85 0 SHEET 2 AA5 7 ARG A 237 HIS A 245 -1 O PHE A 238 N LEU A 84 SHEET 3 AA5 7 ILE A 101 GLY A 107 -1 N ARG A 102 O LEU A 241 SHEET 4 AA5 7 GLN A 115 ASN A 121 -1 O LEU A 117 N PHE A 106 SHEET 5 AA5 7 VAL A 126 HIS A 146 -1 O LYS A 129 N LEU A 118 SHEET 6 AA5 7 ARG A 237 HIS A 245 1 O LEU A 242 N LEU A 141 SHEET 7 AA5 7 VAL A 83 PRO A 85 -1 N LEU A 84 O PHE A 238 SHEET 1 AA6 7 VAL B 83 PRO B 85 0 SHEET 2 AA6 7 ARG B 237 HIS B 245 -1 O PHE B 238 N LEU B 84 SHEET 3 AA6 7 VAL B 126 HIS B 146 1 N LEU B 141 O LEU B 244 SHEET 4 AA6 7 SER B 116 ASN B 121 -1 N LEU B 118 O LYS B 129 SHEET 5 AA6 7 ILE B 101 GLY B 107 -1 N PHE B 106 O LEU B 117 SHEET 6 AA6 7 ARG B 237 HIS B 245 -1 O LEU B 241 N GLY B 103 SHEET 7 AA6 7 VAL B 83 PRO B 85 -1 N LEU B 84 O PHE B 238 SHEET 1 AA7 7 ALA B 27 ASN B 30 0 SHEET 2 AA7 7 ASN B 61 HIS B 66 -1 O VAL B 62 N THR B 29 SHEET 3 AA7 7 ALA B 264 TYR B 269 -1 O TYR B 265 N PHE B 65 SHEET 4 AA7 7 GLY B 89 THR B 95 -1 N ALA B 93 O TYR B 266 SHEET 5 AA7 7 ASN B 188 ILE B 197 -1 O ARG B 190 N SER B 94 SHEET 6 AA7 7 TYR B 200 PRO B 209 -1 O THR B 208 N LEU B 189 SHEET 7 AA7 7 GLU B 224 PRO B 230 -1 O LEU B 229 N PHE B 201 SHEET 1 AA8 3 VAL B 47 PHE B 55 0 SHEET 2 AA8 3 GLN B 271 TYR B 279 -1 O LEU B 277 N HIS B 49 SHEET 3 AA8 3 ILE B 285 ASP B 290 -1 O ASP B 287 N LYS B 278 SHEET 1 AA9 2 ILE B 68 HIS B 69 0 SHEET 2 AA9 2 ARG B 78 PHE B 79 -1 O ARG B 78 N HIS B 69 SHEET 1 AB1 4 GLN D 3 SER D 7 0 SHEET 2 AB1 4 LEU D 18 SER D 25 -1 O ALA D 23 N VAL D 5 SHEET 3 AB1 4 THR D 78 MET D 83 -1 O MET D 83 N LEU D 18 SHEET 4 AB1 4 PHE D 68 ASP D 73 -1 N THR D 69 O GLN D 82 SHEET 1 AB2 6 VAL D 11 VAL D 12 0 SHEET 2 AB2 6 THR D 113 VAL D 117 1 O THR D 116 N VAL D 12 SHEET 3 AB2 6 ALA D 92 ALA D 99 -1 N TYR D 94 O THR D 113 SHEET 4 AB2 6 MET D 34 GLN D 39 -1 N VAL D 37 O TYR D 95 SHEET 5 AB2 6 LEU D 45 ILE D 51 -1 O THR D 49 N TRP D 36 SHEET 6 AB2 6 ARG D 58 TYR D 60 -1 O TYR D 59 N VAL D 50 SHEET 1 AB3 4 VAL D 11 VAL D 12 0 SHEET 2 AB3 4 THR D 113 VAL D 117 1 O THR D 116 N VAL D 12 SHEET 3 AB3 4 ALA D 92 ALA D 99 -1 N TYR D 94 O THR D 113 SHEET 4 AB3 4 PHE D 106 TRP D 109 -1 O TYR D 108 N ARG D 98 SHEET 1 AB4 4 SER D 126 SER D 133 0 SHEET 2 AB4 4 THR D 141 TYR D 151 -1 O LEU D 147 N PHE D 128 SHEET 3 AB4 4 TYR D 182 PRO D 191 -1 O TYR D 182 N TYR D 151 SHEET 4 AB4 4 VAL D 169 THR D 171 -1 N HIS D 170 O VAL D 187 SHEET 1 AB5 4 SER D 126 SER D 133 0 SHEET 2 AB5 4 THR D 141 TYR D 151 -1 O LEU D 147 N PHE D 128 SHEET 3 AB5 4 TYR D 182 PRO D 191 -1 O TYR D 182 N TYR D 151 SHEET 4 AB5 4 VAL D 175 LEU D 176 -1 N VAL D 175 O SER D 183 SHEET 1 AB6 3 THR D 157 TRP D 160 0 SHEET 2 AB6 3 ILE D 201 HIS D 206 -1 O ASN D 205 N THR D 157 SHEET 3 AB6 3 THR D 211 LYS D 216 -1 O VAL D 213 N VAL D 204 SHEET 1 AB7 5 SER C 9 VAL C 12 0 SHEET 2 AB7 5 THR C 103 VAL C 107 1 O LYS C 104 N VAL C 10 SHEET 3 AB7 5 ALA C 83 ALA C 90 -1 N ALA C 83 O LEU C 105 SHEET 4 AB7 5 TYR C 33 GLN C 37 -1 N GLN C 37 O ASP C 84 SHEET 5 AB7 5 VAL C 44 ILE C 47 -1 O VAL C 46 N TRP C 34 SHEET 1 AB8 4 SER C 9 VAL C 12 0 SHEET 2 AB8 4 THR C 103 VAL C 107 1 O LYS C 104 N VAL C 10 SHEET 3 AB8 4 ALA C 83 ALA C 90 -1 N ALA C 83 O LEU C 105 SHEET 4 AB8 4 TRP C 97 PHE C 99 -1 O VAL C 98 N SER C 89 SHEET 1 AB9 3 ALA C 18 SER C 23 0 SHEET 2 AB9 3 THR C 69 ILE C 74 -1 O LEU C 72 N ILE C 20 SHEET 3 AB9 3 PHE C 61 SER C 66 -1 N SER C 62 O THR C 73 SHEET 1 AC1 4 SER C 116 PHE C 120 0 SHEET 2 AC1 4 ALA C 132 PHE C 141 -1 O LEU C 137 N THR C 118 SHEET 3 AC1 4 TYR C 174 LEU C 182 -1 O SER C 178 N CYS C 136 SHEET 4 AC1 4 VAL C 161 THR C 163 -1 N GLU C 162 O TYR C 179 SHEET 1 AC2 4 SER C 116 PHE C 120 0 SHEET 2 AC2 4 ALA C 132 PHE C 141 -1 O LEU C 137 N THR C 118 SHEET 3 AC2 4 TYR C 174 LEU C 182 -1 O SER C 178 N CYS C 136 SHEET 4 AC2 4 SER C 167 LYS C 168 -1 N SER C 167 O ALA C 175 SHEET 1 AC3 4 SER C 155 PRO C 156 0 SHEET 2 AC3 4 THR C 147 ALA C 152 -1 N ALA C 152 O SER C 155 SHEET 3 AC3 4 TYR C 193 HIS C 199 -1 O THR C 198 N THR C 147 SHEET 4 AC3 4 SER C 202 VAL C 208 -1 O SER C 202 N HIS C 199 SHEET 1 AC4 5 SER E 9 VAL E 12 0 SHEET 2 AC4 5 THR E 103 VAL E 107 1 O LYS E 104 N VAL E 10 SHEET 3 AC4 5 ALA E 83 ALA E 90 -1 N ALA E 83 O LEU E 105 SHEET 4 AC4 5 TYR E 33 GLN E 37 -1 N GLN E 37 O ASP E 84 SHEET 5 AC4 5 VAL E 44 ILE E 47 -1 O VAL E 46 N TRP E 34 SHEET 1 AC5 4 SER E 9 VAL E 12 0 SHEET 2 AC5 4 THR E 103 VAL E 107 1 O LYS E 104 N VAL E 10 SHEET 3 AC5 4 ALA E 83 ALA E 90 -1 N ALA E 83 O LEU E 105 SHEET 4 AC5 4 TRP E 97 PHE E 99 -1 O VAL E 98 N SER E 89 SHEET 1 AC6 3 ALA E 18 SER E 23 0 SHEET 2 AC6 3 THR E 69 ILE E 74 -1 O LEU E 72 N ILE E 20 SHEET 3 AC6 3 PHE E 61 SER E 66 -1 N SER E 62 O THR E 73 SHEET 1 AC7 4 SER E 116 PHE E 120 0 SHEET 2 AC7 4 ALA E 132 PHE E 141 -1 O LEU E 137 N THR E 118 SHEET 3 AC7 4 TYR E 174 LEU E 182 -1 O LEU E 182 N ALA E 132 SHEET 4 AC7 4 VAL E 161 THR E 163 -1 N GLU E 162 O TYR E 179 SHEET 1 AC8 4 SER E 116 PHE E 120 0 SHEET 2 AC8 4 ALA E 132 PHE E 141 -1 O LEU E 137 N THR E 118 SHEET 3 AC8 4 TYR E 174 LEU E 182 -1 O LEU E 182 N ALA E 132 SHEET 4 AC8 4 SER E 167 LYS E 168 -1 N SER E 167 O ALA E 175 SHEET 1 AC9 4 SER E 155 VAL E 157 0 SHEET 2 AC9 4 THR E 147 ALA E 152 -1 N ALA E 152 O SER E 155 SHEET 3 AC9 4 TYR E 193 HIS E 199 -1 O THR E 198 N THR E 147 SHEET 4 AC9 4 SER E 202 VAL E 208 -1 O VAL E 204 N VAL E 197 SHEET 1 AD1 4 GLN F 3 SER F 7 0 SHEET 2 AD1 4 LEU F 18 SER F 25 -1 O ALA F 23 N VAL F 5 SHEET 3 AD1 4 THR F 78 MET F 83 -1 O MET F 83 N LEU F 18 SHEET 4 AD1 4 PHE F 68 ASP F 73 -1 N THR F 69 O GLN F 82 SHEET 1 AD2 6 VAL F 11 VAL F 12 0 SHEET 2 AD2 6 THR F 113 VAL F 117 1 O THR F 116 N VAL F 12 SHEET 3 AD2 6 ALA F 92 ALA F 99 -1 N TYR F 94 O THR F 113 SHEET 4 AD2 6 MET F 34 GLN F 39 -1 N VAL F 37 O TYR F 95 SHEET 5 AD2 6 LEU F 45 ILE F 51 -1 O GLU F 46 N ARG F 38 SHEET 6 AD2 6 ARG F 58 TYR F 60 -1 O TYR F 59 N VAL F 50 SHEET 1 AD3 4 VAL F 11 VAL F 12 0 SHEET 2 AD3 4 THR F 113 VAL F 117 1 O THR F 116 N VAL F 12 SHEET 3 AD3 4 ALA F 92 ALA F 99 -1 N TYR F 94 O THR F 113 SHEET 4 AD3 4 PHE F 106 TRP F 109 -1 O TYR F 108 N ARG F 98 SHEET 1 AD4 4 SER F 126 SER F 133 0 SHEET 2 AD4 4 THR F 141 TYR F 151 -1 O LYS F 149 N SER F 126 SHEET 3 AD4 4 TYR F 182 PRO F 191 -1 O TYR F 182 N TYR F 151 SHEET 4 AD4 4 VAL F 169 THR F 171 -1 N HIS F 170 O VAL F 187 SHEET 1 AD5 4 SER F 126 SER F 133 0 SHEET 2 AD5 4 THR F 141 TYR F 151 -1 O LYS F 149 N SER F 126 SHEET 3 AD5 4 TYR F 182 PRO F 191 -1 O TYR F 182 N TYR F 151 SHEET 4 AD5 4 VAL F 175 LEU F 176 -1 N VAL F 175 O SER F 183 SHEET 1 AD6 3 THR F 157 TRP F 160 0 SHEET 2 AD6 3 ILE F 201 HIS F 206 -1 O ASN F 203 N SER F 159 SHEET 3 AD6 3 THR F 211 LYS F 216 -1 O VAL F 213 N VAL F 204 SSBOND 1 CYS A 15 CYS A 136 1555 1555 2.04 SSBOND 2 CYS A 131 CYS A 166 1555 1555 2.04 SSBOND 3 CYS A 291 CYS A 301 1555 1555 2.03 SSBOND 4 CYS B 15 CYS B 136 1555 1555 2.03 SSBOND 5 CYS B 131 CYS B 166 1555 1555 2.04 SSBOND 6 CYS B 291 CYS B 301 1555 1555 2.03 SSBOND 7 CYS D 22 CYS D 96 1555 1555 2.04 SSBOND 8 CYS D 146 CYS D 202 1555 1555 2.02 SSBOND 9 CYS C 22 CYS C 87 1555 1555 2.04 SSBOND 10 CYS C 136 CYS C 195 1555 1555 2.03 SSBOND 11 CYS E 22 CYS E 87 1555 1555 2.04 SSBOND 12 CYS E 136 CYS E 195 1555 1555 2.03 SSBOND 13 CYS F 22 CYS F 96 1555 1555 2.04 SSBOND 14 CYS F 146 CYS F 202 1555 1555 2.03 LINK ND2 ASN A 17 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN A 61 C1 NAG H 1 1555 1555 1.43 LINK ND2 ASN A 122 C1 NAG I 1 1555 1555 1.44 LINK ND2 ASN A 149 C1 NAG A1702 1555 1555 1.45 LINK ND2 ASN A 165 C1 NAG J 1 1555 1555 1.45 LINK ND2 ASN A 234 C1 NAG A1701 1555 1555 1.45 LINK ND2 ASN A 282 C1 NAG K 1 1555 1555 1.45 LINK ND2 ASN B 17 C1 NAG L 1 1555 1555 1.47 LINK ND2 ASN B 61 C1 NAG O 1 1555 1555 1.45 LINK ND2 ASN B 122 C1 NAG M 1 1555 1555 1.44 LINK ND2 ASN B 149 C1 NAG N 1 1555 1555 1.45 LINK ND2 ASN B 165 C1 NAG B 401 1555 1555 1.46 LINK ND2 ASN B 234 C1 NAG B 402 1555 1555 1.45 LINK ND2 ASN B 282 C1 NAG B 403 1555 1555 1.45 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 LINK O6 NAG G 1 C1 FUC G 4 1555 1555 1.43 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.45 LINK O6 NAG H 1 C1 FUC H 2 1555 1555 1.44 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.46 LINK O6 NAG I 1 C1 FUC I 4 1555 1555 1.44 LINK O4 NAG I 2 C1 BMA I 3 1555 1555 1.46 LINK O6 NAG J 1 C1 FUC J 2 1555 1555 1.45 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.46 LINK O6 NAG K 1 C1 FUC K 5 1555 1555 1.45 LINK O4 NAG K 2 C1 BMA K 3 1555 1555 1.46 LINK O6 BMA K 3 C1 MAN K 4 1555 1555 1.44 LINK O4 NAG L 1 C1 NAG L 2 1555 1555 1.44 LINK O6 NAG L 1 C1 FUC L 5 1555 1555 1.45 LINK O4 NAG L 2 C1 BMA L 3 1555 1555 1.46 LINK O6 BMA L 3 C1 MAN L 4 1555 1555 1.46 LINK O4 NAG M 1 C1 NAG M 2 1555 1555 1.45 LINK O6 NAG M 1 C1 FUC M 4 1555 1555 1.44 LINK O4 NAG M 2 C1 BMA M 3 1555 1555 1.46 LINK O6 NAG N 1 C1 FUC N 2 1555 1555 1.44 LINK O6 NAG O 1 C1 FUC O 2 1555 1555 1.46 CISPEP 1 PHE D 152 PRO D 153 0 -7.16 CISPEP 2 GLU D 154 PRO D 155 0 2.61 CISPEP 3 TYR C 142 PRO C 143 0 -0.96 CISPEP 4 TYR E 142 PRO E 143 0 -1.27 CISPEP 5 PHE F 152 PRO F 153 0 -7.28 CISPEP 6 GLU F 154 PRO F 155 0 5.84 CRYST1 66.444 125.457 365.946 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015050 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007971 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002733 0.00000 MTRIX1 1 -0.948842 -0.013519 -0.315462 29.27856 1 MTRIX2 1 0.008075 -0.999795 0.018557 19.34032 1 MTRIX3 1 -0.315648 0.015060 0.948757 3.70648 1 MTRIX1 2 -0.949129 -0.229837 -0.215241 19.57699 1 MTRIX2 2 0.098471 -0.865910 0.490412 3.09953 1 MTRIX3 2 -0.299094 0.444269 0.844492 20.92360 1 MTRIX1 3 -0.968357 0.137373 -0.208360 29.93085 1 MTRIX2 3 -0.216811 -0.876544 0.429725 6.82986 1 MTRIX3 3 -0.123605 0.461302 0.878591 15.34140 1