HEADER OXIDOREDUCTASE 17-MAR-21 7M2O TITLE CRYSTAL STRUCTURE OF HUMAN GLYCOLATE OXIDASE WITH INHIBITOR COMPOUND TITLE 2 15 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYDROXYACID OXIDASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HAOX1,GLYCOLATE OXIDASE,GOX; COMPND 5 EC: 1.1.3.15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HAO1, GOX1, HAOX1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.GUMPENA,J.DING,D.A.POWELL,W.T.LOWTHER REVDAT 2 18-OCT-23 7M2O 1 REMARK REVDAT 1 14-JUL-21 7M2O 0 JRNL AUTH J.DING,R.GUMPENA,M.O.BOILY,A.CARON,O.CHONG,J.H.COX,V.DUMAIS, JRNL AUTH 2 S.GAUDREAULT,A.H.GRAFF,A.KING,J.KNIGHT,R.OBALLA, JRNL AUTH 3 J.SURENDRADOSS,T.TANG,J.WU,W.T.LOWTHER,D.A.POWELL JRNL TITL DUAL GLYCOLATE OXIDASE/LACTATE DEHYDROGENASE A INHIBITORS JRNL TITL 2 FOR PRIMARY HYPEROXALURIA JRNL REF ACS MEDICINAL CHEMISTRY V. 12 1116 2021 JRNL REF 2 LETTERS JRNL DOI 10.1021/ACSMEDCHEMLETT.1C00196 REMARK 2 REMARK 2 RESOLUTION. 2.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 21419 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.128 REMARK 3 R VALUE (WORKING SET) : 0.126 REMARK 3 FREE R VALUE : 0.166 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1065 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.07 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.12 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1534 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 85 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2602 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 119 REMARK 3 SOLVENT ATOMS : 200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.031 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.028 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.991 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2820 ; 0.011 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2728 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3818 ; 1.754 ; 1.686 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6299 ; 1.365 ; 1.598 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 348 ; 6.649 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 139 ;29.040 ;21.151 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 495 ;14.858 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;18.100 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 355 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3094 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 585 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1359 ; 1.727 ; 1.913 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1358 ; 1.726 ; 1.911 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1700 ; 2.395 ; 2.855 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1701 ; 2.395 ; 2.858 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1461 ; 2.901 ; 2.510 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1462 ; 2.900 ; 2.510 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2110 ; 4.405 ; 3.606 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3372 ; 7.453 ;24.628 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3372 ; 7.453 ;24.625 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.784 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.216 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 7M2O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1000255510. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : CU REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 200K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22486 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2RDW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL PH 8.5, 25 % (W/V) PEG REMARK 280 1000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 48.45200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.45200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 39.76800 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 48.45200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.45200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.76800 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 48.45200 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 48.45200 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 39.76800 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 48.45200 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 48.45200 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 39.76800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 MET A -13 REMARK 465 ALA A -12 REMARK 465 SER A -11 REMARK 465 MET A -10 REMARK 465 THR A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 GLN A -6 REMARK 465 GLN A -5 REMARK 465 MET A -4 REMARK 465 GLY A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 LYS A 176 REMARK 465 LEU A 177 REMARK 465 PRO A 178 REMARK 465 PRO A 179 REMARK 465 GLN A 180 REMARK 465 LEU A 181 REMARK 465 ARG A 182 REMARK 465 MET A 183 REMARK 465 LYS A 184 REMARK 465 ASN A 185 REMARK 465 PHE A 186 REMARK 465 GLU A 187 REMARK 465 THR A 188 REMARK 465 SER A 189 REMARK 465 THR A 190 REMARK 465 LEU A 191 REMARK 465 SER A 192 REMARK 465 PHE A 193 REMARK 465 SER A 194 REMARK 465 PRO A 195 REMARK 465 GLU A 196 REMARK 465 GLU A 197 REMARK 465 ASN A 198 REMARK 465 PHE A 199 REMARK 465 GLY A 200 REMARK 465 ASP A 201 REMARK 465 ASP A 202 REMARK 465 SER A 203 REMARK 465 GLY A 204 REMARK 465 PRO A 364 REMARK 465 LEU A 365 REMARK 465 ALA A 366 REMARK 465 VAL A 367 REMARK 465 SER A 368 REMARK 465 LYS A 369 REMARK 465 ILE A 370 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 32 -122.22 57.14 REMARK 500 ASN A 56 101.90 77.85 REMARK 500 ASN A 56 105.36 -54.42 REMARK 500 THR A 64 -168.18 -162.31 REMARK 500 PRO A 74 48.67 -85.82 REMARK 500 GLN A 264 -100.55 -112.99 REMARK 500 GLN A 324 41.03 -166.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue YOJ A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 409 DBREF 7M2O A 1 370 UNP Q9UJM8 HAOX1_HUMAN 1 370 SEQADV 7M2O GLY A -16 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O SER A -15 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O HIS A -14 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O MET A -13 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O ALA A -12 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O SER A -11 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O MET A -10 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O THR A -9 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O GLY A -8 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O GLY A -7 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O GLN A -6 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O GLN A -5 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O MET A -4 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O GLY A -3 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O ARG A -2 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O GLY A -1 UNP Q9UJM8 EXPRESSION TAG SEQADV 7M2O SER A 0 UNP Q9UJM8 EXPRESSION TAG SEQRES 1 A 387 GLY SER HIS MET ALA SER MET THR GLY GLY GLN GLN MET SEQRES 2 A 387 GLY ARG GLY SER MET LEU PRO ARG LEU ILE CYS ILE ASN SEQRES 3 A 387 ASP TYR GLU GLN HIS ALA LYS SER VAL LEU PRO LYS SER SEQRES 4 A 387 ILE TYR ASP TYR TYR ARG SER GLY ALA ASN ASP GLU GLU SEQRES 5 A 387 THR LEU ALA ASP ASN ILE ALA ALA PHE SER ARG TRP LYS SEQRES 6 A 387 LEU TYR PRO ARG MET LEU ARG ASN VAL ALA GLU THR ASP SEQRES 7 A 387 LEU SER THR SER VAL LEU GLY GLN ARG VAL SER MET PRO SEQRES 8 A 387 ILE CYS VAL GLY ALA THR ALA MET GLN ARG MET ALA HIS SEQRES 9 A 387 VAL ASP GLY GLU LEU ALA THR VAL ARG ALA CYS GLN SER SEQRES 10 A 387 LEU GLY THR GLY MET MET LEU SER SER TRP ALA THR SER SEQRES 11 A 387 SER ILE GLU GLU VAL ALA GLU ALA GLY PRO GLU ALA LEU SEQRES 12 A 387 ARG TRP LEU GLN LEU TYR ILE TYR LYS ASP ARG GLU VAL SEQRES 13 A 387 THR LYS LYS LEU VAL ARG GLN ALA GLU LYS MET GLY TYR SEQRES 14 A 387 LYS ALA ILE PHE VAL THR VAL ASP THR PRO TYR LEU GLY SEQRES 15 A 387 ASN ARG LEU ASP ASP VAL ARG ASN ARG PHE LYS LEU PRO SEQRES 16 A 387 PRO GLN LEU ARG MET LYS ASN PHE GLU THR SER THR LEU SEQRES 17 A 387 SER PHE SER PRO GLU GLU ASN PHE GLY ASP ASP SER GLY SEQRES 18 A 387 LEU ALA ALA TYR VAL ALA LYS ALA ILE ASP PRO SER ILE SEQRES 19 A 387 SER TRP GLU ASP ILE LYS TRP LEU ARG ARG LEU THR SER SEQRES 20 A 387 LEU PRO ILE VAL ALA LYS GLY ILE LEU ARG GLY ASP ASP SEQRES 21 A 387 ALA ARG GLU ALA VAL LYS HIS GLY LEU ASN GLY ILE LEU SEQRES 22 A 387 VAL SER ASN HIS GLY ALA ARG GLN LEU ASP GLY VAL PRO SEQRES 23 A 387 ALA THR ILE ASP VAL LEU PRO GLU ILE VAL GLU ALA VAL SEQRES 24 A 387 GLU GLY LYS VAL GLU VAL PHE LEU ASP GLY GLY VAL ARG SEQRES 25 A 387 LYS GLY THR ASP VAL LEU LYS ALA LEU ALA LEU GLY ALA SEQRES 26 A 387 LYS ALA VAL PHE VAL GLY ARG PRO ILE VAL TRP GLY LEU SEQRES 27 A 387 ALA PHE GLN GLY GLU LYS GLY VAL GLN ASP VAL LEU GLU SEQRES 28 A 387 ILE LEU LYS GLU GLU PHE ARG LEU ALA MET ALA LEU SER SEQRES 29 A 387 GLY CYS GLN ASN VAL LYS VAL ILE ASP LYS THR LEU VAL SEQRES 30 A 387 ARG LYS ASN PRO LEU ALA VAL SER LYS ILE HET FMN A 401 31 HET YOJ A 402 51 HET EDO A 403 4 HET PEG A 404 7 HET EDO A 405 4 HET EDO A 406 4 HET PEG A 407 7 HET PEG A 408 7 HET EDO A 409 4 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM YOJ 5-[(5'-{1-(4-CARBOXY-1,3-THIAZOL-2-YL)-5- HETNAM 2 YOJ (CYCLOPROPYLMETHYL)-4-[(3-FLUORO-4-SULFAMOYLPHENYL) HETNAM 3 YOJ METHYL]-1H-PYRAZOL-3-YL}-2'-FLUORO[1,1'-BIPHENYL]-4- HETNAM 4 YOJ YL)OXY]-1H-1,2,3-TRIAZOLE-4-CARBOXYLIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 FMN C17 H21 N4 O9 P FORMUL 3 YOJ C33 H25 F2 N7 O7 S2 FORMUL 4 EDO 4(C2 H6 O2) FORMUL 5 PEG 3(C4 H10 O3) FORMUL 11 HOH *200(H2 O) HELIX 1 AA1 CYS A 7 LEU A 19 1 13 HELIX 2 AA2 PRO A 20 SER A 29 1 10 HELIX 3 AA3 GLU A 34 ARG A 46 1 13 HELIX 4 AA4 MET A 82 ALA A 86 5 5 HELIX 5 AA5 ASP A 89 GLY A 102 1 14 HELIX 6 AA6 SER A 114 GLY A 122 1 9 HELIX 7 AA7 ASP A 136 MET A 150 1 15 HELIX 8 AA8 ARG A 167 ARG A 174 1 8 HELIX 9 AA9 ALA A 206 ILE A 213 1 8 HELIX 10 AB1 SER A 218 THR A 229 1 12 HELIX 11 AB2 ARG A 240 HIS A 250 1 11 HELIX 12 AB3 ALA A 270 GLU A 283 1 14 HELIX 13 AB4 LYS A 296 LEU A 306 1 11 HELIX 14 AB5 GLY A 314 SER A 347 1 34 HELIX 15 AB6 ASN A 351 ILE A 355 5 5 HELIX 16 AB7 ASP A 356 THR A 358 5 3 SHEET 1 AA1 2 TRP A 47 LEU A 49 0 SHEET 2 AA1 2 VAL A 360 LYS A 362 -1 O ARG A 361 N LYS A 48 SHEET 1 AA2 2 THR A 64 VAL A 66 0 SHEET 2 AA2 2 GLN A 69 VAL A 71 -1 O VAL A 71 N THR A 64 SHEET 1 AA3 9 ILE A 75 VAL A 77 0 SHEET 2 AA3 9 GLY A 104 LEU A 107 1 O GLY A 104 N VAL A 77 SHEET 3 AA3 9 LEU A 126 LEU A 131 1 O GLN A 130 N LEU A 107 SHEET 4 AA3 9 ILE A 155 THR A 158 1 O PHE A 156 N LEU A 129 SHEET 5 AA3 9 ILE A 233 ILE A 238 1 O LYS A 236 N VAL A 157 SHEET 6 AA3 9 GLY A 254 VAL A 257 1 O LEU A 256 N ALA A 235 SHEET 7 AA3 9 GLU A 287 LEU A 290 1 O PHE A 289 N ILE A 255 SHEET 8 AA3 9 ALA A 310 VAL A 313 1 O PHE A 312 N LEU A 290 SHEET 9 AA3 9 ILE A 75 VAL A 77 1 N CYS A 76 O VAL A 311 CISPEP 1 LEU A 2 PRO A 3 0 -8.20 SITE 1 AC1 24 TYR A 27 ALA A 79 THR A 80 ALA A 81 SITE 2 AC1 24 SER A 108 TRP A 110 GLN A 130 TYR A 132 SITE 3 AC1 24 THR A 158 LYS A 236 SER A 258 HIS A 260 SITE 4 AC1 24 GLY A 261 ARG A 263 ASP A 291 GLY A 292 SITE 5 AC1 24 GLY A 293 ARG A 295 GLY A 314 ARG A 315 SITE 6 AC1 24 YOJ A 402 HOH A 550 HOH A 574 HOH A 634 SITE 1 AC2 16 TYR A 26 ALA A 81 MET A 82 TRP A 110 SITE 2 AC2 16 ALA A 111 THR A 112 SER A 113 SER A 114 SITE 3 AC2 16 TYR A 132 TYR A 134 ARG A 167 LEU A 205 SITE 4 AC2 16 TYR A 208 HIS A 260 ARG A 263 FMN A 401 SITE 1 AC3 4 ASN A 32 ASP A 33 LEU A 168 GLU A 339 SITE 1 AC4 7 ASP A 61 SER A 63 ASN A 351 LYS A 353 SITE 2 AC4 7 HOH A 511 HOH A 543 HOH A 645 SITE 1 AC5 3 ALA A 281 GLU A 283 LYS A 285 SITE 1 AC6 8 ARG A 52 MET A 53 LEU A 54 ARG A 55 SITE 2 AC6 8 VAL A 159 ALA A 345 GLY A 348 HOH A 648 SITE 1 AC7 9 ARG A 84 MET A 85 ALA A 86 HIS A 87 SITE 2 AC7 9 VAL A 88 LYS A 353 HOH A 502 HOH A 579 SITE 3 AC7 9 HOH A 645 SITE 1 AC8 3 LEU A 5 GLN A 13 HOH A 557 SITE 1 AC9 5 LEU A 37 ALA A 38 ILE A 41 HOH A 539 SITE 2 AC9 5 HOH A 600 CRYST1 96.904 96.904 79.536 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010319 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010319 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012573 0.00000