HEADER IMMUNE SYSTEM 28-APR-21 7MLM TITLE CRYSTAL STRUCTURE OF MOUSE TLR4/MD-2 IN COMPLEX WITH SULFATIDES COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOLL-LIKE RECEPTOR 4,VARIABLE LYMPHOCYTE RECEPTOR B; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.2.6; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: LYMPHOCYTE ANTIGEN 96; COMPND 8 CHAIN: C; COMPND 9 SYNONYM: LY-96,ESOP-1,PROTEIN MD-2; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS, EPTATRETUS BURGERI; SOURCE 3 ORGANISM_COMMON: MOUSE, INSHORE HAGFISH; SOURCE 4 ORGANISM_TAXID: 10090, 7764; SOURCE 5 GENE: TLR4, LPS, VLRB; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE (BTI-TN-5B1-4); SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 GENE: LY96, ESOP1, MD2; SOURCE 14 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: HIGH FIVE (BTI-TN-5B1-4) KEYWDS INNATE IMMUNITY, ENDOGENOUS LIGANDS, TOLL-LIKE RECEPTORS, IMMUNE KEYWDS 2 SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR L.SU,B.BEUTLER REVDAT 4 06-NOV-24 7MLM 1 REMARK REVDAT 3 18-OCT-23 7MLM 1 REMARK REVDAT 2 25-AUG-21 7MLM 1 JRNL REVDAT 1 28-JUL-21 7MLM 0 JRNL AUTH L.SU,M.ATHAMNA,Y.WANG,J.WANG,M.FREUDENBERG,T.YUE,J.WANG, JRNL AUTH 2 E.M.Y.MORESCO,H.HE,T.ZOR,B.BEUTLER JRNL TITL SULFATIDES ARE ENDOGENOUS LIGANDS FOR THE TLR4-MD-2 COMPLEX. JRNL REF PROC.NATL.ACAD.SCI.USA V. 118 2021 JRNL REFN ESSN 1091-6490 JRNL PMID 34290146 JRNL DOI 10.1073/PNAS.2105316118 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 75.1 REMARK 3 NUMBER OF REFLECTIONS : 46679 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.280 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3960 - 5.0678 0.98 4368 196 0.2145 0.2349 REMARK 3 2 5.0678 - 4.0232 1.00 4302 192 0.1612 0.1809 REMARK 3 3 4.0232 - 3.5149 0.98 4210 188 0.1694 0.2068 REMARK 3 4 3.5149 - 3.1936 1.00 4224 190 0.2137 0.2591 REMARK 3 5 3.1936 - 2.9647 1.00 4222 189 0.2243 0.2612 REMARK 3 6 2.9647 - 2.7899 0.98 4150 186 0.2414 0.3086 REMARK 3 7 2.7899 - 2.6502 0.97 4142 184 0.2450 0.2518 REMARK 3 8 2.6502 - 2.5349 0.93 3941 177 0.2491 0.3074 REMARK 3 9 2.5349 - 2.4373 0.77 3233 145 0.2497 0.2611 REMARK 3 10 2.4373 - 2.3532 0.57 2415 108 0.2536 0.2838 REMARK 3 11 2.3532 - 2.2796 0.43 1813 81 0.2497 0.3046 REMARK 3 12 2.2796 - 2.2145 0.35 1466 66 0.2454 0.2764 REMARK 3 13 2.2145 - 2.1562 0.29 1219 55 0.2364 0.2697 REMARK 3 14 2.1562 - 2.1040 0.23 974 43 0.2403 0.3793 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 27:59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.317 47.573 12.060 REMARK 3 T TENSOR REMARK 3 T11: 0.2034 T22: 0.5249 REMARK 3 T33: 0.6422 T12: -0.0122 REMARK 3 T13: 0.1045 T23: -0.0959 REMARK 3 L TENSOR REMARK 3 L11: 0.9034 L22: 0.0628 REMARK 3 L33: 2.4824 L12: 0.0027 REMARK 3 L13: -1.4726 L23: -0.0748 REMARK 3 S TENSOR REMARK 3 S11: 0.0876 S12: 0.0045 S13: 0.1946 REMARK 3 S21: 0.0123 S22: -0.0021 S23: -0.3738 REMARK 3 S31: -0.1150 S32: 0.6806 S33: -0.0582 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 60:260 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.899 46.765 8.321 REMARK 3 T TENSOR REMARK 3 T11: 0.1599 T22: 0.2153 REMARK 3 T33: 0.2109 T12: 0.0381 REMARK 3 T13: 0.1089 T23: -0.0306 REMARK 3 L TENSOR REMARK 3 L11: 0.7332 L22: 1.1305 REMARK 3 L33: 1.0863 L12: 0.0002 REMARK 3 L13: 0.2367 L23: 0.3294 REMARK 3 S TENSOR REMARK 3 S11: 0.0414 S12: 0.2357 S13: 0.1193 REMARK 3 S21: -0.0836 S22: -0.0720 S23: 0.1056 REMARK 3 S31: -0.1074 S32: -0.0469 S33: 0.0195 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 261:346 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.729 19.655 2.163 REMARK 3 T TENSOR REMARK 3 T11: 0.3794 T22: 0.3692 REMARK 3 T33: 0.3511 T12: -0.0679 REMARK 3 T13: 0.0959 T23: -0.1411 REMARK 3 L TENSOR REMARK 3 L11: 0.8566 L22: 0.9934 REMARK 3 L33: 0.7670 L12: -0.3845 REMARK 3 L13: 0.0171 L23: 0.3322 REMARK 3 S TENSOR REMARK 3 S11: -0.1259 S12: 0.0607 S13: -0.1890 REMARK 3 S21: 0.1461 S22: -0.1229 S23: 0.5100 REMARK 3 S31: 0.5188 S32: -0.4672 S33: 0.1626 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 347:433 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.116 9.087 -10.397 REMARK 3 T TENSOR REMARK 3 T11: 0.5263 T22: 0.1047 REMARK 3 T33: 0.0500 T12: 0.0104 REMARK 3 T13: 0.1279 T23: -0.2605 REMARK 3 L TENSOR REMARK 3 L11: 0.3459 L22: 0.6458 REMARK 3 L33: 0.7694 L12: -0.2932 REMARK 3 L13: -0.1219 L23: 0.3317 REMARK 3 S TENSOR REMARK 3 S11: -0.4523 S12: 0.1689 S13: -0.1303 REMARK 3 S21: 0.4127 S22: 0.1330 S23: 0.1743 REMARK 3 S31: 0.4338 S32: -0.4086 S33: 0.0219 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 434:466 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.157 3.690 -15.402 REMARK 3 T TENSOR REMARK 3 T11: 0.3150 T22: 0.1341 REMARK 3 T33: 0.2015 T12: -0.0118 REMARK 3 T13: 0.0421 T23: -0.0467 REMARK 3 L TENSOR REMARK 3 L11: 2.2630 L22: 2.2272 REMARK 3 L33: 2.6829 L12: -0.7292 REMARK 3 L13: 0.7051 L23: 0.5456 REMARK 3 S TENSOR REMARK 3 S11: -0.2274 S12: -0.0204 S13: -0.1440 REMARK 3 S21: 0.3071 S22: 0.0235 S23: -0.2388 REMARK 3 S31: 0.2875 S32: -0.0575 S33: 0.1194 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN A AND RESID 467:563 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.534 9.819 -14.764 REMARK 3 T TENSOR REMARK 3 T11: 0.3196 T22: 0.1442 REMARK 3 T33: 0.4281 T12: 0.0197 REMARK 3 T13: -0.1408 T23: 0.0303 REMARK 3 L TENSOR REMARK 3 L11: 0.9133 L22: 0.1768 REMARK 3 L33: 0.6235 L12: -0.0105 REMARK 3 L13: -0.1519 L23: -0.1849 REMARK 3 S TENSOR REMARK 3 S11: -0.2872 S12: -0.0190 S13: -0.0414 REMARK 3 S21: 0.2113 S22: -0.0070 S23: -0.5149 REMARK 3 S31: 0.0472 S32: 0.1846 S33: 0.0856 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN A AND RESID 564:618 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.607 18.781 -7.967 REMARK 3 T TENSOR REMARK 3 T11: 0.3753 T22: 0.2207 REMARK 3 T33: 0.8911 T12: -0.1740 REMARK 3 T13: -0.7706 T23: -0.0821 REMARK 3 L TENSOR REMARK 3 L11: 0.3207 L22: 0.4426 REMARK 3 L33: 0.4282 L12: -0.2235 REMARK 3 L13: -0.0762 L23: -0.2749 REMARK 3 S TENSOR REMARK 3 S11: -0.1936 S12: -0.0865 S13: 0.1690 REMARK 3 S21: 0.2053 S22: -0.0145 S23: -0.4679 REMARK 3 S31: -0.1390 S32: 0.2799 S33: -0.0444 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN C AND RESID 21:44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.079 22.738 31.554 REMARK 3 T TENSOR REMARK 3 T11: 0.7715 T22: 0.2710 REMARK 3 T33: 0.3023 T12: 0.0808 REMARK 3 T13: -0.2137 T23: -0.2197 REMARK 3 L TENSOR REMARK 3 L11: 0.7864 L22: 2.8154 REMARK 3 L33: 0.1335 L12: 1.1780 REMARK 3 L13: -0.2937 L23: -0.3575 REMARK 3 S TENSOR REMARK 3 S11: 0.0223 S12: -0.1871 S13: -0.0800 REMARK 3 S21: 0.2451 S22: 0.1015 S23: -0.2012 REMARK 3 S31: 0.2067 S32: 0.1632 S33: -0.1156 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN C AND RESID 45:55 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.460 16.034 31.203 REMARK 3 T TENSOR REMARK 3 T11: 0.4415 T22: 0.1921 REMARK 3 T33: 0.2970 T12: 0.0125 REMARK 3 T13: 0.0609 T23: -0.0337 REMARK 3 L TENSOR REMARK 3 L11: 6.7115 L22: 1.8746 REMARK 3 L33: 5.6376 L12: 0.2662 REMARK 3 L13: 0.7956 L23: 3.1375 REMARK 3 S TENSOR REMARK 3 S11: -0.1542 S12: -0.2881 S13: -0.3120 REMARK 3 S21: 0.5467 S22: 0.1052 S23: 0.5547 REMARK 3 S31: 0.1696 S32: -0.2194 S33: 0.0225 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN C AND RESID 56:82 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.912 24.262 20.001 REMARK 3 T TENSOR REMARK 3 T11: 0.2646 T22: 0.1727 REMARK 3 T33: 0.2139 T12: 0.0291 REMARK 3 T13: -0.0100 T23: -0.0613 REMARK 3 L TENSOR REMARK 3 L11: 0.6929 L22: 1.9883 REMARK 3 L33: 1.1680 L12: -0.0502 REMARK 3 L13: -0.1949 L23: -0.3569 REMARK 3 S TENSOR REMARK 3 S11: 0.1573 S12: 0.0054 S13: -0.0300 REMARK 3 S21: 0.3761 S22: 0.0627 S23: -0.0546 REMARK 3 S31: 0.1266 S32: 0.0141 S33: -0.1126 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN C AND RESID 83:102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.450 17.647 14.220 REMARK 3 T TENSOR REMARK 3 T11: 0.2656 T22: 0.2299 REMARK 3 T33: 0.2915 T12: 0.0563 REMARK 3 T13: -0.0575 T23: -0.0924 REMARK 3 L TENSOR REMARK 3 L11: 1.2727 L22: 2.8483 REMARK 3 L33: 0.8741 L12: -1.4165 REMARK 3 L13: 0.1149 L23: -1.1741 REMARK 3 S TENSOR REMARK 3 S11: 0.1520 S12: 0.0238 S13: 0.0453 REMARK 3 S21: 0.2959 S22: -0.0585 S23: -0.1369 REMARK 3 S31: 0.1618 S32: 0.0900 S33: -0.0799 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN C AND RESID 103:143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.378 21.413 20.784 REMARK 3 T TENSOR REMARK 3 T11: 0.3501 T22: 0.2045 REMARK 3 T33: 0.2268 T12: 0.0031 REMARK 3 T13: -0.0852 T23: -0.1023 REMARK 3 L TENSOR REMARK 3 L11: 0.7703 L22: 2.9302 REMARK 3 L33: 0.8237 L12: -0.4752 REMARK 3 L13: -0.2880 L23: -1.0479 REMARK 3 S TENSOR REMARK 3 S11: 0.1756 S12: 0.0603 S13: 0.0813 REMARK 3 S21: 0.3961 S22: 0.0478 S23: -0.2402 REMARK 3 S31: 0.2590 S32: 0.1399 S33: -0.0395 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ( CHAIN C AND RESID 144:156 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.291 19.584 26.359 REMARK 3 T TENSOR REMARK 3 T11: 0.3441 T22: 0.2340 REMARK 3 T33: 0.3064 T12: 0.0062 REMARK 3 T13: -0.1559 T23: -0.1592 REMARK 3 L TENSOR REMARK 3 L11: 1.6095 L22: 2.2112 REMARK 3 L33: 1.5542 L12: -0.2941 REMARK 3 L13: 0.9736 L23: 1.2680 REMARK 3 S TENSOR REMARK 3 S11: 0.2032 S12: -0.1335 S13: 0.0156 REMARK 3 S21: 0.3795 S22: 0.0083 S23: -0.0639 REMARK 3 S31: 0.0674 S32: 0.1213 S33: -0.0282 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: ( CHAIN A AND RESID 703:704 ) OR ( CHAIN C AND RESID REMARK 3 203:203 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.242 12.278 17.039 REMARK 3 T TENSOR REMARK 3 T11: 0.5176 T22: 0.4973 REMARK 3 T33: 0.5096 T12: 0.0244 REMARK 3 T13: -0.0574 T23: 0.0274 REMARK 3 L TENSOR REMARK 3 L11: 0.0008 L22: 0.0040 REMARK 3 L33: -0.0006 L12: -0.0077 REMARK 3 L13: 0.0013 L23: 0.0019 REMARK 3 S TENSOR REMARK 3 S11: 0.0465 S12: 0.0694 S13: -0.0095 REMARK 3 S21: -0.0802 S22: 0.0822 S23: 0.0676 REMARK 3 S31: 0.0472 S32: -0.0829 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7MLM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-21. REMARK 100 THE DEPOSITION ID IS D_1000256336. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97951 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58410 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 200 DATA REDUNDANCY : 11.90 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 64.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 1.13400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5IJC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH8.0, 0.8 M SODIUM REMARK 280 FORMATE, 8% PEG 8000, 8% PEG 1000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.64800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.64800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 72.54700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 82.14650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 72.54700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 82.14650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.64800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 72.54700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 82.14650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.64800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 72.54700 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 82.14650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 59030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -15 REMARK 465 LEU A -14 REMARK 465 LEU A -13 REMARK 465 VAL A -12 REMARK 465 ASN A -11 REMARK 465 GLN A -10 REMARK 465 SER A -9 REMARK 465 HIS A -8 REMARK 465 GLN A -7 REMARK 465 GLY A -6 REMARK 465 PHE A -5 REMARK 465 ASN A -4 REMARK 465 LYS A -3 REMARK 465 GLU A -2 REMARK 465 HIS A -1 REMARK 465 THR A 0 REMARK 465 SER A 1 REMARK 465 LYS A 2 REMARK 465 MET A 3 REMARK 465 VAL A 4 REMARK 465 SER A 5 REMARK 465 ALA A 6 REMARK 465 ILE A 7 REMARK 465 VAL A 8 REMARK 465 LEU A 9 REMARK 465 TYR A 10 REMARK 465 VAL A 11 REMARK 465 LEU A 12 REMARK 465 LEU A 13 REMARK 465 ALA A 14 REMARK 465 ALA A 15 REMARK 465 ALA A 16 REMARK 465 ALA A 17 REMARK 465 HIS A 18 REMARK 465 SER A 19 REMARK 465 ALA A 20 REMARK 465 PHE A 21 REMARK 465 ALA A 22 REMARK 465 ALA A 23 REMARK 465 ASP A 24 REMARK 465 PRO A 25 REMARK 465 ASN A 26 REMARK 465 GLY A 607 REMARK 465 SER A 608 REMARK 465 THR A 619 REMARK 465 MET C -22 REMARK 465 LEU C -21 REMARK 465 LEU C -20 REMARK 465 VAL C -19 REMARK 465 ASN C -18 REMARK 465 GLN C -17 REMARK 465 SER C -16 REMARK 465 HIS C -15 REMARK 465 GLN C -14 REMARK 465 GLY C -13 REMARK 465 PHE C -12 REMARK 465 ASN C -11 REMARK 465 LYS C -10 REMARK 465 GLU C -9 REMARK 465 HIS C -8 REMARK 465 THR C -7 REMARK 465 SER C -6 REMARK 465 LYS C -5 REMARK 465 MET C -4 REMARK 465 VAL C -3 REMARK 465 SER C -2 REMARK 465 ALA C -1 REMARK 465 ILE C 0 REMARK 465 VAL C 1 REMARK 465 LEU C 2 REMARK 465 TYR C 3 REMARK 465 VAL C 4 REMARK 465 LEU C 5 REMARK 465 LEU C 6 REMARK 465 ALA C 7 REMARK 465 ALA C 8 REMARK 465 ALA C 9 REMARK 465 ALA C 10 REMARK 465 HIS C 11 REMARK 465 SER C 12 REMARK 465 ALA C 13 REMARK 465 PHE C 14 REMARK 465 ALA C 15 REMARK 465 ALA C 16 REMARK 465 ASP C 17 REMARK 465 PRO C 18 REMARK 465 GLU C 19 REMARK 465 LYS C 20 REMARK 465 ARG C 157 REMARK 465 ASP C 158 REMARK 465 VAL C 159 REMARK 465 ASN C 160 REMARK 465 LEU C 161 REMARK 465 VAL C 162 REMARK 465 PRO C 163 REMARK 465 ARG C 164 REMARK 465 GLY C 165 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 492 O5 NAG A 701 2.07 REMARK 500 O4 NAG D 1 O5 NAG D 2 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 34 15.05 59.68 REMARK 500 ILE A 35 -53.09 -130.21 REMARK 500 LYS A 66 -36.53 71.87 REMARK 500 LEU A 100 55.31 -93.19 REMARK 500 GLN A 114 -73.00 64.21 REMARK 500 ASN A 159 -154.91 -121.77 REMARK 500 ASN A 184 -157.57 -119.50 REMARK 500 ASN A 200 78.58 -118.52 REMARK 500 HIS A 228 -72.30 -72.87 REMARK 500 THR A 290 -167.80 -111.66 REMARK 500 SER A 317 41.79 -78.59 REMARK 500 ASN A 415 53.09 -98.16 REMARK 500 ASP A 460 16.12 -140.28 REMARK 500 LEU A 468 58.19 -90.06 REMARK 500 ASN A 479 -152.77 -103.91 REMARK 500 ASP A 483 16.35 58.79 REMARK 500 ASN A 528 -165.05 -112.19 REMARK 500 ASN A 552 -155.38 -121.68 REMARK 500 CYS A 580 54.81 -99.04 REMARK 500 SER A 614 55.90 -114.46 REMARK 500 REMARK 500 REMARK: NULL DBREF 7MLM A 26 544 UNP Q9QUK6 TLR4_MOUSE 26 544 DBREF 7MLM A 545 619 UNP Q4G1L2 Q4G1L2_EPTBU 126 200 DBREF 7MLM C 19 160 UNP Q9JHF9 LY96_MOUSE 19 160 SEQADV 7MLM MET A -15 UNP Q9QUK6 INITIATING METHIONINE SEQADV 7MLM LEU A -14 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM LEU A -13 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM VAL A -12 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM ASN A -11 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM GLN A -10 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM SER A -9 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM HIS A -8 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM GLN A -7 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM GLY A -6 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM PHE A -5 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM ASN A -4 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM LYS A -3 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM GLU A -2 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM HIS A -1 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM THR A 0 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM SER A 1 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM LYS A 2 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM MET A 3 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM VAL A 4 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM SER A 5 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM ALA A 6 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM ILE A 7 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM VAL A 8 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM LEU A 9 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM TYR A 10 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM VAL A 11 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM LEU A 12 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM LEU A 13 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM ALA A 14 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM ALA A 15 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM ALA A 16 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM ALA A 17 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM HIS A 18 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM SER A 19 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM ALA A 20 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM PHE A 21 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM ALA A 22 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM ALA A 23 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM ASP A 24 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM PRO A 25 UNP Q9QUK6 EXPRESSION TAG SEQADV 7MLM MET C -22 UNP Q9JHF9 INITIATING METHIONINE SEQADV 7MLM LEU C -21 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM LEU C -20 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM VAL C -19 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ASN C -18 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM GLN C -17 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM SER C -16 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM HIS C -15 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM GLN C -14 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM GLY C -13 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM PHE C -12 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ASN C -11 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM LYS C -10 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM GLU C -9 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM HIS C -8 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM THR C -7 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM SER C -6 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM LYS C -5 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM MET C -4 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM VAL C -3 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM SER C -2 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ALA C -1 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ILE C 0 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM VAL C 1 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM LEU C 2 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM TYR C 3 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM VAL C 4 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM LEU C 5 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM LEU C 6 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ALA C 7 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ALA C 8 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ALA C 9 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ALA C 10 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM HIS C 11 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM SER C 12 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ALA C 13 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM PHE C 14 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ALA C 15 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ALA C 16 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ASP C 17 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM PRO C 18 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM LEU C 161 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM VAL C 162 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM PRO C 163 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM ARG C 164 UNP Q9JHF9 EXPRESSION TAG SEQADV 7MLM GLY C 165 UNP Q9JHF9 EXPRESSION TAG SEQRES 1 A 635 MET LEU LEU VAL ASN GLN SER HIS GLN GLY PHE ASN LYS SEQRES 2 A 635 GLU HIS THR SER LYS MET VAL SER ALA ILE VAL LEU TYR SEQRES 3 A 635 VAL LEU LEU ALA ALA ALA ALA HIS SER ALA PHE ALA ALA SEQRES 4 A 635 ASP PRO ASN PRO CYS ILE GLU VAL VAL PRO ASN ILE THR SEQRES 5 A 635 TYR GLN CYS MET ASP GLN LYS LEU SER LYS VAL PRO ASP SEQRES 6 A 635 ASP ILE PRO SER SER THR LYS ASN ILE ASP LEU SER PHE SEQRES 7 A 635 ASN PRO LEU LYS ILE LEU LYS SER TYR SER PHE SER ASN SEQRES 8 A 635 PHE SER GLU LEU GLN TRP LEU ASP LEU SER ARG CYS GLU SEQRES 9 A 635 ILE GLU THR ILE GLU ASP LYS ALA TRP HIS GLY LEU HIS SEQRES 10 A 635 HIS LEU SER ASN LEU ILE LEU THR GLY ASN PRO ILE GLN SEQRES 11 A 635 SER PHE SER PRO GLY SER PHE SER GLY LEU THR SER LEU SEQRES 12 A 635 GLU ASN LEU VAL ALA VAL GLU THR LYS LEU ALA SER LEU SEQRES 13 A 635 GLU SER PHE PRO ILE GLY GLN LEU ILE THR LEU LYS LYS SEQRES 14 A 635 LEU ASN VAL ALA HIS ASN PHE ILE HIS SER CYS LYS LEU SEQRES 15 A 635 PRO ALA TYR PHE SER ASN LEU THR ASN LEU VAL HIS VAL SEQRES 16 A 635 ASP LEU SER TYR ASN TYR ILE GLN THR ILE THR VAL ASN SEQRES 17 A 635 ASP LEU GLN PHE LEU ARG GLU ASN PRO GLN VAL ASN LEU SEQRES 18 A 635 SER LEU ASP MET SER LEU ASN PRO ILE ASP PHE ILE GLN SEQRES 19 A 635 ASP GLN ALA PHE GLN GLY ILE LYS LEU HIS GLU LEU THR SEQRES 20 A 635 LEU ARG GLY ASN PHE ASN SER SER ASN ILE MET LYS THR SEQRES 21 A 635 CYS LEU GLN ASN LEU ALA GLY LEU HIS VAL HIS ARG LEU SEQRES 22 A 635 ILE LEU GLY GLU PHE LYS ASP GLU ARG ASN LEU GLU ILE SEQRES 23 A 635 PHE GLU PRO SER ILE MET GLU GLY LEU CYS ASP VAL THR SEQRES 24 A 635 ILE ASP GLU PHE ARG LEU THR TYR THR ASN ASP PHE SER SEQRES 25 A 635 ASP ASP ILE VAL LYS PHE HIS CYS LEU ALA ASN VAL SER SEQRES 26 A 635 ALA MET SER LEU ALA GLY VAL SER ILE LYS TYR LEU GLU SEQRES 27 A 635 ASP VAL PRO LYS HIS PHE LYS TRP GLN SER LEU SER ILE SEQRES 28 A 635 ILE ARG CYS GLN LEU LYS GLN PHE PRO THR LEU ASP LEU SEQRES 29 A 635 PRO PHE LEU LYS SER LEU THR LEU THR MET ASN LYS GLY SEQRES 30 A 635 SER ILE SER PHE LYS LYS VAL ALA LEU PRO SER LEU SER SEQRES 31 A 635 TYR LEU ASP LEU SER ARG ASN ALA LEU SER PHE SER GLY SEQRES 32 A 635 CYS CYS SER TYR SER ASP LEU GLY THR ASN SER LEU ARG SEQRES 33 A 635 HIS LEU ASP LEU SER PHE ASN GLY ALA ILE ILE MET SER SEQRES 34 A 635 ALA ASN PHE MET GLY LEU GLU GLU LEU GLN HIS LEU ASP SEQRES 35 A 635 PHE GLN HIS SER THR LEU LYS ARG VAL THR GLU PHE SER SEQRES 36 A 635 ALA PHE LEU SER LEU GLU LYS LEU LEU TYR LEU ASP ILE SEQRES 37 A 635 SER TYR THR ASN THR LYS ILE ASP PHE ASP GLY ILE PHE SEQRES 38 A 635 LEU GLY LEU THR SER LEU ASN THR LEU LYS MET ALA GLY SEQRES 39 A 635 ASN SER PHE LYS ASP ASN THR LEU SER ASN VAL PHE ALA SEQRES 40 A 635 ASN THR THR ASN LEU THR PHE LEU ASP LEU SER LYS CYS SEQRES 41 A 635 GLN LEU GLU GLN ILE SER TRP GLY VAL PHE ASP THR LEU SEQRES 42 A 635 HIS ARG LEU GLN LEU LEU ASN MET SER HIS ASN ASN LEU SEQRES 43 A 635 LEU PHE LEU ASP SER SER HIS TYR ASN GLN LEU TYR SER SEQRES 44 A 635 LEU LYS GLU LEU ALA LEU ASP THR ASN GLN LEU LYS SER SEQRES 45 A 635 VAL PRO ASP GLY ILE PHE ASP ARG LEU THR SER LEU GLN SEQRES 46 A 635 LYS ILE TRP LEU HIS THR ASN PRO TRP ASP CYS SER CYS SEQRES 47 A 635 PRO ARG ILE ASP TYR LEU SER ARG TRP LEU ASN LYS ASN SEQRES 48 A 635 SER GLN LYS GLU GLN GLY SER ALA LYS CYS SER GLY SER SEQRES 49 A 635 GLY LYS PRO VAL ARG SER ILE ILE CYS PRO THR SEQRES 1 C 188 MET LEU LEU VAL ASN GLN SER HIS GLN GLY PHE ASN LYS SEQRES 2 C 188 GLU HIS THR SER LYS MET VAL SER ALA ILE VAL LEU TYR SEQRES 3 C 188 VAL LEU LEU ALA ALA ALA ALA HIS SER ALA PHE ALA ALA SEQRES 4 C 188 ASP PRO GLU LYS GLN GLN TRP PHE CYS ASN SER SER ASP SEQRES 5 C 188 ALA ILE ILE SER TYR SER TYR CYS ASP HIS LEU LYS PHE SEQRES 6 C 188 PRO ILE SER ILE SER SER GLU PRO CYS ILE ARG LEU ARG SEQRES 7 C 188 GLY THR ASN GLY PHE VAL HIS VAL GLU PHE ILE PRO ARG SEQRES 8 C 188 GLY ASN LEU LYS TYR LEU TYR PHE ASN LEU PHE ILE SER SEQRES 9 C 188 VAL ASN SER ILE GLU LEU PRO LYS ARG LYS GLU VAL LEU SEQRES 10 C 188 CYS HIS GLY HIS ASP ASP ASP TYR SER PHE CYS ARG ALA SEQRES 11 C 188 LEU LYS GLY GLU THR VAL ASN THR SER ILE PRO PHE SER SEQRES 12 C 188 PHE GLU GLY ILE LEU PHE PRO LYS GLY HIS TYR ARG CYS SEQRES 13 C 188 VAL ALA GLU ALA ILE ALA GLY ASP THR GLU GLU LYS LEU SEQRES 14 C 188 PHE CYS LEU ASN PHE THR ILE ILE HIS ARG ARG ASP VAL SEQRES 15 C 188 ASN LEU VAL PRO ARG GLY HET NAG B 1 14 HET NAG B 2 14 HET NAG D 1 14 HET NAG D 2 14 HET NAG D 3 14 HET NAG A 701 14 HET NAG A 702 14 HET ZKM A 703 53 HET ZKM A 704 53 HET NAG C 201 14 HET NAG C 202 14 HET ZKM C 203 53 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM ZKM N-[(1S,2R,3E)-2-HYDROXY-1-{[(3-O-SULFO-BETA-D- HETNAM 2 ZKM GALACTOPYRANOSYL)OXY]METHYL}HEPTADEC-3-EN-1-YL]- HETNAM 3 ZKM HEXADECANAMIDE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 NAG 9(C8 H15 N O6) FORMUL 7 ZKM 3(C40 H77 N O11 S) FORMUL 12 HOH *262(H2 O) HELIX 1 AA1 PRO A 167 ASN A 172 5 6 HELIX 2 AA2 VAL A 191 ASP A 193 5 3 HELIX 3 AA3 LEU A 194 ASN A 200 1 7 HELIX 4 AA4 SER A 238 ASN A 248 1 11 HELIX 5 AA5 GLU A 272 VAL A 282 5 11 HELIX 6 AA6 SER A 296 ALA A 306 5 11 HELIX 7 AA7 SER A 390 GLY A 395 1 6 HELIX 8 AA8 ASP A 534 ASN A 539 5 6 HELIX 9 AA9 ILE A 585 ASN A 595 1 11 HELIX 10 AB1 PRO A 611 ILE A 615 5 5 HELIX 11 AB2 TYR C 102 ALA C 107 5 6 SHEET 1 AA125 ILE A 29 VAL A 32 0 SHEET 2 AA125 THR A 36 GLN A 38 -1 O GLN A 38 N ILE A 29 SHEET 3 AA125 ASN A 57 ASP A 59 1 O ASN A 57 N TYR A 37 SHEET 4 AA125 TRP A 81 ASP A 83 1 O ASP A 83 N ILE A 58 SHEET 5 AA125 ASN A 105 ILE A 107 1 O ILE A 107 N LEU A 82 SHEET 6 AA125 ASN A 129 VAL A 131 1 O VAL A 131 N LEU A 106 SHEET 7 AA125 LYS A 153 ASN A 155 1 O ASN A 155 N LEU A 130 SHEET 8 AA125 HIS A 178 ASP A 180 1 O ASP A 180 N LEU A 154 SHEET 9 AA125 SER A 206 ASP A 208 1 O SER A 206 N VAL A 179 SHEET 10 AA125 LYS A 226 ARG A 233 1 O GLU A 229 N LEU A 207 SHEET 11 AA125 HIS A 253 GLY A 260 1 O ILE A 258 N LEU A 232 SHEET 12 AA125 THR A 283 LEU A 289 1 O ARG A 288 N LEU A 257 SHEET 13 AA125 ALA A 310 ALA A 314 1 O ALA A 310 N PHE A 287 SHEET 14 AA125 SER A 332 ILE A 336 1 O SER A 334 N LEU A 313 SHEET 15 AA125 SER A 353 THR A 357 1 O THR A 355 N ILE A 335 SHEET 16 AA125 TYR A 375 ASP A 377 1 O ASP A 377 N LEU A 356 SHEET 17 AA125 HIS A 401 ASP A 403 1 O ASP A 403 N LEU A 376 SHEET 18 AA125 HIS A 424 ASP A 426 1 O HIS A 424 N LEU A 402 SHEET 19 AA125 TYR A 449 ASP A 451 1 O TYR A 449 N LEU A 425 SHEET 20 AA125 THR A 473 LYS A 475 1 O LYS A 475 N LEU A 450 SHEET 21 AA125 PHE A 498 ASP A 500 1 O PHE A 498 N LEU A 474 SHEET 22 AA125 LEU A 522 ASN A 524 1 O ASN A 524 N LEU A 499 SHEET 23 AA125 GLU A 546 ALA A 548 1 O ALA A 548 N LEU A 523 SHEET 24 AA125 LYS A 570 TRP A 572 1 O TRP A 572 N LEU A 547 SHEET 25 AA125 GLU A 599 GLN A 600 1 O GLN A 600 N ILE A 571 SHEET 1 AA2 2 ILE A 67 LEU A 68 0 SHEET 2 AA2 2 THR A 91 ILE A 92 1 O THR A 91 N LEU A 68 SHEET 1 AA3 2 THR A 188 ILE A 189 0 SHEET 2 AA3 2 PHE A 216 ILE A 217 1 O PHE A 216 N ILE A 189 SHEET 1 AA4 3 PHE A 385 CYS A 388 0 SHEET 2 AA4 3 ALA A 409 MET A 412 1 O ILE A 411 N PHE A 385 SHEET 3 AA4 3 THR A 431 LYS A 433 1 O LYS A 433 N MET A 412 SHEET 1 AA5 2 LYS A 458 ILE A 459 0 SHEET 2 AA5 2 SER A 480 PHE A 481 1 O SER A 480 N ILE A 459 SHEET 1 AA6 2 THR A 485 LEU A 486 0 SHEET 2 AA6 2 GLN A 508 ILE A 509 1 O GLN A 508 N LEU A 486 SHEET 1 AA7 6 TRP C 23 ASN C 26 0 SHEET 2 AA7 6 ALA C 30 TYR C 36 -1 O ILE C 32 N CYS C 25 SHEET 3 AA7 6 GLU C 144 HIS C 155 -1 O THR C 152 N SER C 33 SHEET 4 AA7 6 GLY C 129 ALA C 139 -1 N TYR C 131 O ILE C 153 SHEET 5 AA7 6 LEU C 74 VAL C 82 -1 N ASN C 77 O GLU C 136 SHEET 6 AA7 6 ILE C 85 GLU C 86 -1 O ILE C 85 N VAL C 82 SHEET 1 AA8 6 TRP C 23 ASN C 26 0 SHEET 2 AA8 6 ALA C 30 TYR C 36 -1 O ILE C 32 N CYS C 25 SHEET 3 AA8 6 GLU C 144 HIS C 155 -1 O THR C 152 N SER C 33 SHEET 4 AA8 6 GLY C 129 ALA C 139 -1 N TYR C 131 O ILE C 153 SHEET 5 AA8 6 LEU C 74 VAL C 82 -1 N ASN C 77 O GLU C 136 SHEET 6 AA8 6 ARG C 90 VAL C 93 -1 O ARG C 90 N LEU C 78 SHEET 1 AA9 3 SER C 45 GLU C 49 0 SHEET 2 AA9 3 GLY C 56 PHE C 65 -1 O PHE C 60 N GLU C 49 SHEET 3 AA9 3 VAL C 113 GLU C 122 -1 O THR C 115 N VAL C 63 SSBOND 1 CYS A 28 CYS A 39 1555 1555 2.03 SSBOND 2 CYS A 280 CYS A 304 1555 1555 2.03 SSBOND 3 CYS A 388 CYS A 389 1555 1555 2.02 SSBOND 4 CYS A 580 CYS A 605 1555 1555 2.03 SSBOND 5 CYS A 582 CYS A 617 1555 1555 2.03 SSBOND 6 CYS C 25 CYS C 51 1555 1555 2.03 SSBOND 7 CYS C 37 CYS C 148 1555 1555 2.03 SSBOND 8 CYS C 95 CYS C 105 1555 1555 2.03 LINK ND2 ASN A 204 C1 NAG B 1 1555 1555 1.53 LINK ND2 ASN A 237 C1 NAG D 1 1555 1555 1.48 LINK ND2 ASN A 492 C1 NAG A 701 1555 1555 1.52 LINK ND2 ASN A 524 C1 NAG A 702 1555 1555 1.51 LINK ND2 ASN C 114 C1 NAG C 201 1555 1555 1.48 LINK ND2 ASN C 150 C1 NAG C 202 1555 1555 1.53 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.43 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.43 LINK O4 NAG D 2 C1 NAG D 3 1555 1555 1.46 CISPEP 1 CYS A 388 CYS A 389 0 -8.89 CISPEP 2 CYS A 582 PRO A 583 0 3.69 CISPEP 3 GLU C 49 PRO C 50 0 -0.08 CRYST1 145.094 164.293 89.296 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006892 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006087 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011199 0.00000