HEADER LIGASE 30-APR-21 7MMZ TITLE CRYSTAL STRUCTURE OF ACETYL-COENZYME A SYNTHETASE FROM LEGIONELLA TITLE 2 PNEUMOPHILA PHILADELPHIA 1 IN COMPLEX WITH ETHYL-AMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYL-COENZYME A SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: LEPNA.00629.A.B1; COMPND 5 EC: 6.2.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA SUBSP. PNEUMOPHILA SOURCE 3 (STRAIN PHILADELPHIA 1 / ATCC 33152 / DSM 7513); SOURCE 4 ORGANISM_TAXID: 272624; SOURCE 5 STRAIN: PHILADELPHIA 1 / ATCC 33152 / DSM 7513; SOURCE 6 ATCC: 33152; SOURCE 7 GENE: ACSB, LPG0127; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: LEPNA.00629.A.B1 KEYWDS SSGCID, ACETYL-COENZYME A SYNTHETASE, ACS-1, LEGIONELLA PNEUMOPHILA, KEYWDS 2 STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 3 25-OCT-23 7MMZ 1 REMARK REVDAT 2 07-JUN-23 7MMZ 1 JRNL REVDAT 1 26-MAY-21 7MMZ 0 JRNL AUTH N.D.DEBOUVER,M.J.BOLEJACK,T.E.ESAN,D.J.KRYSAN,T.J.HAGEN, JRNL AUTH 2 J.ABENDROTH JRNL TITL BACTERIAL STRUCTURAL GENOMICS TARGET ENABLED BY A RECENTLY JRNL TITL 2 DISCOVERED POTENT FUNGAL ACETYL-COA SYNTHETASE INHIBITOR. JRNL REF ACTA CRYSTALLOGR.,SECT.F 2023 JRNL REFN ESSN 2053-230X JRNL PMID 37223974 JRNL DOI 10.1107/S2053230X23003801 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19 DEV 4205 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 26362 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.740 REMARK 3 FREE R VALUE TEST SET COUNT : 2041 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.4700 - 5.9200 0.99 1789 155 0.1933 0.1962 REMARK 3 2 5.9100 - 4.7000 1.00 1690 130 0.1595 0.1845 REMARK 3 3 4.6900 - 4.1000 0.99 1654 134 0.1494 0.2030 REMARK 3 4 4.1000 - 3.7300 0.99 1623 136 0.1687 0.2140 REMARK 3 5 3.7300 - 3.4600 0.99 1612 153 0.1854 0.2248 REMARK 3 6 3.4600 - 3.2600 0.99 1591 140 0.1961 0.2504 REMARK 3 7 3.2600 - 3.0900 0.99 1636 111 0.2078 0.2974 REMARK 3 8 3.0900 - 2.9600 1.00 1604 145 0.2265 0.2531 REMARK 3 9 2.9600 - 2.8500 1.00 1610 120 0.2274 0.2618 REMARK 3 10 2.8500 - 2.7500 1.00 1593 133 0.2245 0.2192 REMARK 3 11 2.7500 - 2.6600 1.00 1581 137 0.2035 0.2799 REMARK 3 12 2.6600 - 2.5900 1.00 1574 142 0.2120 0.2427 REMARK 3 13 2.5900 - 2.5200 1.00 1613 122 0.2104 0.2701 REMARK 3 14 2.5200 - 2.4600 1.00 1590 133 0.2125 0.2739 REMARK 3 15 2.4600 - 2.4000 1.00 1561 150 0.2434 0.2651 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.268 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.09 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4367 REMARK 3 ANGLE : 0.757 5981 REMARK 3 CHIRALITY : 0.052 676 REMARK 3 PLANARITY : 0.007 779 REMARK 3 DIHEDRAL : 14.676 1509 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 12 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.4086 30.7991 28.6413 REMARK 3 T TENSOR REMARK 3 T11: 0.3717 T22: 0.3689 REMARK 3 T33: 0.6678 T12: 0.0058 REMARK 3 T13: 0.1097 T23: -0.0721 REMARK 3 L TENSOR REMARK 3 L11: 3.3375 L22: 2.7076 REMARK 3 L33: 3.8930 L12: 1.1257 REMARK 3 L13: 0.9181 L23: 0.5807 REMARK 3 S TENSOR REMARK 3 S11: -0.1772 S12: -0.2945 S13: 0.4566 REMARK 3 S21: 0.2398 S22: -0.0076 S23: 0.6688 REMARK 3 S31: -0.0967 S32: -0.4742 S33: 0.2209 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 64 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.9952 23.0329 5.3980 REMARK 3 T TENSOR REMARK 3 T11: 0.6138 T22: 0.4790 REMARK 3 T33: 0.3554 T12: -0.2840 REMARK 3 T13: -0.0244 T23: 0.0293 REMARK 3 L TENSOR REMARK 3 L11: 3.0264 L22: 2.5813 REMARK 3 L33: 1.4953 L12: 0.1016 REMARK 3 L13: -0.3555 L23: 0.4073 REMARK 3 S TENSOR REMARK 3 S11: -0.5432 S12: 0.8341 S13: 0.0202 REMARK 3 S21: -0.6197 S22: 0.4082 S23: 0.2975 REMARK 3 S31: 0.0738 S32: -0.1523 S33: 0.1263 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.2715 11.8413 -1.4086 REMARK 3 T TENSOR REMARK 3 T11: 0.9622 T22: 0.7579 REMARK 3 T33: 0.5308 T12: -0.4668 REMARK 3 T13: 0.1691 T23: -0.1986 REMARK 3 L TENSOR REMARK 3 L11: 2.0714 L22: 1.8070 REMARK 3 L33: 1.9015 L12: 0.0477 REMARK 3 L13: 0.2000 L23: 0.1114 REMARK 3 S TENSOR REMARK 3 S11: -0.8637 S12: 1.2588 S13: -0.5955 REMARK 3 S21: -0.9271 S22: 0.7641 S23: -0.2078 REMARK 3 S31: 0.5609 S32: -0.0799 S33: -0.0557 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 222 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.9594 23.2812 18.9871 REMARK 3 T TENSOR REMARK 3 T11: 0.4276 T22: 0.2654 REMARK 3 T33: 0.3689 T12: -0.1032 REMARK 3 T13: 0.0414 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 2.9670 L22: 2.6248 REMARK 3 L33: 1.8912 L12: 0.5380 REMARK 3 L13: 0.0370 L23: 0.5726 REMARK 3 S TENSOR REMARK 3 S11: -0.2392 S12: 0.1116 S13: -0.0622 REMARK 3 S21: -0.0283 S22: 0.0521 S23: 0.4522 REMARK 3 S31: 0.1998 S32: -0.2692 S33: 0.1130 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 271 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6635 36.6787 10.8022 REMARK 3 T TENSOR REMARK 3 T11: 0.5270 T22: 0.3324 REMARK 3 T33: 0.3811 T12: -0.1972 REMARK 3 T13: 0.0076 T23: 0.0493 REMARK 3 L TENSOR REMARK 3 L11: 2.8093 L22: 2.7783 REMARK 3 L33: 1.8070 L12: 1.2077 REMARK 3 L13: -0.4640 L23: 0.1320 REMARK 3 S TENSOR REMARK 3 S11: -0.5537 S12: 0.5956 S13: 0.2829 REMARK 3 S21: -0.6595 S22: 0.4353 S23: -0.1430 REMARK 3 S31: -0.2796 S32: 0.1341 S33: 0.0694 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 386 THROUGH 416 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.4175 37.4650 26.0968 REMARK 3 T TENSOR REMARK 3 T11: 0.4562 T22: 0.2909 REMARK 3 T33: 0.4370 T12: -0.0468 REMARK 3 T13: -0.0073 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 2.9448 L22: 3.9138 REMARK 3 L33: 1.4839 L12: 2.5821 REMARK 3 L13: -0.6979 L23: 0.6176 REMARK 3 S TENSOR REMARK 3 S11: 0.0241 S12: -0.0237 S13: 0.6371 REMARK 3 S21: 0.2852 S22: -0.0056 S23: 0.3313 REMARK 3 S31: -0.1004 S32: 0.1974 S33: 0.0939 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 417 THROUGH 528 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4467 22.3057 32.0056 REMARK 3 T TENSOR REMARK 3 T11: 0.5312 T22: 0.2751 REMARK 3 T33: 0.3076 T12: 0.0263 REMARK 3 T13: 0.0117 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 4.4668 L22: 3.2431 REMARK 3 L33: 2.2798 L12: 1.2103 REMARK 3 L13: -0.2135 L23: 0.4857 REMARK 3 S TENSOR REMARK 3 S11: -0.1591 S12: -0.3712 S13: -0.3938 REMARK 3 S21: 0.5549 S22: 0.0551 S23: -0.2454 REMARK 3 S31: 0.4349 S32: 0.2362 S33: 0.0543 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 529 THROUGH 575 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5847 10.0480 17.1214 REMARK 3 T TENSOR REMARK 3 T11: 0.5153 T22: 0.6220 REMARK 3 T33: 1.2543 T12: 0.0246 REMARK 3 T13: 0.2150 T23: -0.2965 REMARK 3 L TENSOR REMARK 3 L11: 2.5109 L22: 6.1526 REMARK 3 L33: 4.7815 L12: -3.8761 REMARK 3 L13: -0.4573 L23: 1.1594 REMARK 3 S TENSOR REMARK 3 S11: -0.3727 S12: 0.8784 S13: -1.2047 REMARK 3 S21: -0.2161 S22: 0.8105 S23: -1.7590 REMARK 3 S31: -0.0522 S32: 1.0484 S33: -0.1738 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7MMZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-21. REMARK 100 THE DEPOSITION ID IS D_1000256555. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26436 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.846 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.7400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.16 REMARK 200 R MERGE FOR SHELL (I) : 0.61800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: PDB ENTRY 1PG4 AS PER MORDA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RIGAKUREAGENTS WIZARD JCSG TOP96 REMARK 280 SCREEN, CONDITION B6: 100MM HEPES FREE ACID / SODIUM HYDROXIDE REMARK 280 PH 7.5, 20% (W/V) PEG 4000, 20% (V/V) ISOPROPANOL: REMARK 280 LEPNA.00629.A.B1.PW38314 AT 20MG/ML + 2MM TCEP + 3MM ETHYLAMP REMARK 280 (BSI111322): TRAY 319765 B6, CRYO 20% EG + COMPOUND: PUCK HYQ3- REMARK 280 9., PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 114.39500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.46500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.46500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.19750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.46500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.46500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 171.59250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.46500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.46500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.19750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.46500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.46500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 171.59250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 114.39500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 PRO A 3 REMARK 465 VAL A 4 REMARK 465 HIS A 5 REMARK 465 LEU A 6 REMARK 465 LYS A 7 REMARK 465 HIS A 8 REMARK 465 PRO A 9 REMARK 465 HIS A 10 REMARK 465 LEU A 11 REMARK 465 LYS A 542 REMARK 465 GLN A 543 REMARK 465 GLY A 544 REMARK 465 ASN A 545 REMARK 465 LYS A 546 REMARK 465 ASN A 576 REMARK 465 ASP A 577 REMARK 465 LEU A 578 REMARK 465 PRO A 579 REMARK 465 LYS A 580 REMARK 465 THR A 581 REMARK 465 ARG A 582 REMARK 465 SER A 583 REMARK 465 GLY A 584 REMARK 465 LYS A 585 REMARK 465 ILE A 586 REMARK 465 MET A 587 REMARK 465 ARG A 588 REMARK 465 ARG A 589 REMARK 465 ILE A 590 REMARK 465 LEU A 591 REMARK 465 ARG A 592 REMARK 465 LYS A 593 REMARK 465 ILE A 594 REMARK 465 ALA A 595 REMARK 465 CYS A 596 REMARK 465 LYS A 597 REMARK 465 GLU A 598 REMARK 465 VAL A 599 REMARK 465 SER A 600 REMARK 465 HIS A 601 REMARK 465 ILE A 602 REMARK 465 ASP A 603 REMARK 465 GLU A 604 REMARK 465 LEU A 605 REMARK 465 GLY A 606 REMARK 465 ASP A 607 REMARK 465 LEU A 608 REMARK 465 THR A 609 REMARK 465 THR A 610 REMARK 465 LEU A 611 REMARK 465 ALA A 612 REMARK 465 ASN A 613 REMARK 465 PRO A 614 REMARK 465 GLN A 615 REMARK 465 ILE A 616 REMARK 465 VAL A 617 REMARK 465 GLU A 618 REMARK 465 GLU A 619 REMARK 465 LEU A 620 REMARK 465 MET A 621 REMARK 465 LYS A 622 REMARK 465 ASN A 623 REMARK 465 ILE A 624 REMARK 465 LEU A 625 REMARK 465 LYS A 626 REMARK 465 ARG A 627 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 16 CG CD OE1 OE2 REMARK 470 LYS A 46 CG CD CE NZ REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 ARG A 112 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 163 CG CD CE NZ REMARK 470 LYS A 176 CG CD CE NZ REMARK 470 LYS A 182 CG CD CE NZ REMARK 470 ASP A 190 CG OD1 OD2 REMARK 470 LYS A 199 CG CD CE NZ REMARK 470 ASN A 202 CG OD1 ND2 REMARK 470 LYS A 209 CG CD CE NZ REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 LYS A 219 CG CD CE NZ REMARK 470 GLN A 220 CG CD OE1 NE2 REMARK 470 GLN A 225 CG CD OE1 NE2 REMARK 470 GLN A 268 CG CD OE1 NE2 REMARK 470 ASP A 275 CG OD1 OD2 REMARK 470 GLU A 371 CG CD OE1 OE2 REMARK 470 LYS A 384 CG CD CE NZ REMARK 470 GLU A 429 CG CD OE1 OE2 REMARK 470 GLN A 430 CG CD OE1 NE2 REMARK 470 ASN A 469 CG OD1 ND2 REMARK 470 LYS A 517 CG CD CE NZ REMARK 470 VAL A 518 CG1 CG2 REMARK 470 GLU A 520 CG CD OE1 OE2 REMARK 470 ILE A 540 CG1 CG2 CD1 REMARK 470 ASP A 548 CG OD1 OD2 REMARK 470 GLU A 550 CG CD OE1 OE2 REMARK 470 GLU A 554 CG CD OE1 OE2 REMARK 470 ARG A 558 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 560 CG CD CE NZ REMARK 470 ASP A 561 CG OD1 OD2 REMARK 470 ILE A 566 CG1 CG2 CD1 REMARK 470 LYS A 568 CG CD CE NZ REMARK 470 VAL A 571 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 64 -72.74 -139.40 REMARK 500 ASN A 110 4.25 83.37 REMARK 500 ASN A 192 79.66 -104.81 REMARK 500 VAL A 295 -70.42 -99.28 REMARK 500 TRP A 392 -176.47 -175.31 REMARK 500 LYS A 411 74.60 47.43 REMARK 500 ARG A 416 -127.42 65.92 REMARK 500 ALA A 456 109.97 -52.80 REMARK 500 ASP A 493 -157.76 -96.06 REMARK 500 ILE A 563 -88.32 -118.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue WTA A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 702 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: LEPNA.00629.A RELATED DB: TARGETTRACK DBREF 7MMZ A 1 627 UNP Q5ZZ84 Q5ZZ84_LEGPH 1 627 SEQADV 7MMZ MET A -7 UNP Q5ZZ84 INITIATING METHIONINE SEQADV 7MMZ ALA A -6 UNP Q5ZZ84 EXPRESSION TAG SEQADV 7MMZ HIS A -5 UNP Q5ZZ84 EXPRESSION TAG SEQADV 7MMZ HIS A -4 UNP Q5ZZ84 EXPRESSION TAG SEQADV 7MMZ HIS A -3 UNP Q5ZZ84 EXPRESSION TAG SEQADV 7MMZ HIS A -2 UNP Q5ZZ84 EXPRESSION TAG SEQADV 7MMZ HIS A -1 UNP Q5ZZ84 EXPRESSION TAG SEQADV 7MMZ HIS A 0 UNP Q5ZZ84 EXPRESSION TAG SEQRES 1 A 635 MET ALA HIS HIS HIS HIS HIS HIS MET LEU PRO VAL HIS SEQRES 2 A 635 LEU LYS HIS PRO HIS LEU THR ALA THR GLU GLU TYR LEU SEQRES 3 A 635 SER GLU PHE TRP SER GLU ILE ALA ALA GLN THR ILE ASP SEQRES 4 A 635 TRP ILE GLN PRO TRP SER ILE THR LEU GLN GLY GLY LEU SEQRES 5 A 635 HIS LYS GLY ASP VAL LYS TRP PHE GLN GLY GLY LEU LEU SEQRES 6 A 635 ASN VAL SER ALA ASN CYS LEU ASP ARG HIS LEU PRO HIS SEQRES 7 A 635 LYS ALA ASN GLN THR ALA ILE ILE TRP GLU GLY ASP ASP SEQRES 8 A 635 GLU ASN GLN ASN LYS THR LEU THR PHE ALA GLN LEU TYR SEQRES 9 A 635 SER GLU VAL CYS LYS MET SER ASN VAL LEU LYS SER LEU SEQRES 10 A 635 ASN VAL ARG ARG GLY ASP THR VAL GLY ILE TYR LEU PRO SEQRES 11 A 635 MET ILE PRO GLU ALA ALA ILE ALA MET LEU ALA CYS ALA SEQRES 12 A 635 ARG ILE GLY ALA ILE HIS THR VAL VAL PHE ALA GLY PHE SEQRES 13 A 635 SER ALA HIS ALA LEU GLN GLN ARG LEU ILE ALA SER SER SEQRES 14 A 635 CYS LYS CYS LEU ILE THR ALA ASP ALA PHE GLN ARG GLY SEQRES 15 A 635 GLY LYS THR ILE PRO LEU LYS LYS GLN ALA ASP GLU ALA SEQRES 16 A 635 SER VAL ASP LEU ASN ILE THR LYS LEU VAL VAL LYS ASN SEQRES 17 A 635 SER ASN ALA PRO THR ALA LEU ASN LYS ASN LYS GLU HIS SEQRES 18 A 635 TRP TRP HIS GLU LEU LYS GLN THR VAL SER ASP GLN CYS SEQRES 19 A 635 THR PRO GLU PRO MET ASN THR GLU ASP PRO LEU PHE ILE SEQRES 20 A 635 LEU TYR THR SER GLY SER THR GLY GLN PRO LYS GLY VAL SEQRES 21 A 635 VAL HIS THR THR GLY GLY TYR LEU VAL GLN ALA ALA TYR SEQRES 22 A 635 THR HIS GLN LEU ILE PHE ALA CYS GLN ASP ASN GLU VAL SEQRES 23 A 635 PHE TRP CYS THR ALA ASP VAL GLY TRP ILE THR GLY HIS SEQRES 24 A 635 SER TYR VAL VAL TYR GLY PRO LEU CYS ASN GLY ILE THR SEQRES 25 A 635 THR LEU MET PHE GLU GLY ILE PRO THR TRP PRO ASP ALA SEQRES 26 A 635 ALA ARG ASN TRP ARG ILE ILE ASP LYS HIS GLN VAL ASN SEQRES 27 A 635 VAL PHE TYR THR ALA PRO THR ALA ILE ARG SER LEU MET SEQRES 28 A 635 ARG ALA GLY ASP GLN TRP LEU ASN SER SER SER ARG SER SEQRES 29 A 635 SER LEU ARG LEU LEU GLY SER VAL GLY GLU PRO ILE ASN SEQRES 30 A 635 PRO GLU ALA TRP ASN TRP TYR HIS GLN LYS VAL GLY GLN SEQRES 31 A 635 GLY LYS CYS PRO ILE VAL ASP THR TRP TRP GLN THR GLU SEQRES 32 A 635 THR GLY ALA ILE MET ILE SER PRO ARG ALA SER ASP GLU SEQRES 33 A 635 VAL ILE LYS PRO GLY SER ALA ARG LYS PRO ILE PRO GLY SEQRES 34 A 635 ILE VAL PRO LEU LEU LEU ASN GLU GLN GLY HIS GLU ILE SEQRES 35 A 635 ASN GLY ALA GLY GLU GLY LEU LEU ALA ILE LYS TYR PRO SEQRES 36 A 635 TRP PRO SER MET ALA ARG THR ILE ALA GLY ASP HIS GLN SEQRES 37 A 635 ARG TYR CYS ASN THR TYR LEU SER ASN GLY TYR TYR ILE SEQRES 38 A 635 THR GLY ASP GLY ALA LYS ARG ASP GLU ASP GLY ASP TYR SEQRES 39 A 635 TRP ILE THR GLY ARG ILE ASP ASP VAL LEU ASN VAL SER SEQRES 40 A 635 GLY HIS ARG LEU GLY THR ALA GLU ILE GLU SER ALA LEU SEQRES 41 A 635 VAL SER HIS PRO LYS VAL ALA GLU ALA GLY VAL VAL GLY SEQRES 42 A 635 ILE PRO HIS ASP LEU LYS GLY GLN ALA ILE PHE ALA TYR SEQRES 43 A 635 VAL ILE LEU LYS GLN GLY ASN LYS PRO ASP ALA GLU LEU SEQRES 44 A 635 GLN THR GLU LEU MET GLU ARG VAL LYS ASP GLN ILE SER SEQRES 45 A 635 ALA ILE ALA LYS PRO ASP VAL ILE GLN PHE ALA ASN ASP SEQRES 46 A 635 LEU PRO LYS THR ARG SER GLY LYS ILE MET ARG ARG ILE SEQRES 47 A 635 LEU ARG LYS ILE ALA CYS LYS GLU VAL SER HIS ILE ASP SEQRES 48 A 635 GLU LEU GLY ASP LEU THR THR LEU ALA ASN PRO GLN ILE SEQRES 49 A 635 VAL GLU GLU LEU MET LYS ASN ILE LEU LYS ARG HET WTA A 701 25 HET EDO A 702 4 HETNAM WTA 5'-O-[(S)-ETHOXY(HYDROXY)PHOSPHORYL]ADENOSINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 WTA C12 H18 N5 O7 P FORMUL 3 EDO C2 H6 O2 FORMUL 4 HOH *122(H2 O) HELIX 1 AA1 THR A 12 ILE A 30 1 19 HELIX 2 AA2 ASN A 58 LEU A 64 1 7 HELIX 3 AA3 ASP A 65 LEU A 68 5 4 HELIX 4 AA4 PHE A 92 LEU A 109 1 18 HELIX 5 AA5 ILE A 124 GLY A 138 1 15 HELIX 6 AA6 SER A 149 SER A 161 1 13 HELIX 7 AA7 PRO A 179 VAL A 189 1 11 HELIX 8 AA8 TRP A 215 LYS A 219 1 5 HELIX 9 AA9 GLN A 220 VAL A 222 5 3 HELIX 10 AB1 THR A 256 ALA A 272 1 17 HELIX 11 AB2 TRP A 287 VAL A 294 1 8 HELIX 12 AB3 VAL A 295 ASN A 301 1 7 HELIX 13 AB4 ALA A 318 GLN A 328 1 11 HELIX 14 AB5 ALA A 335 GLY A 346 1 12 HELIX 15 AB6 ASP A 347 ASN A 351 5 5 HELIX 16 AB7 ASN A 369 LYS A 379 1 11 HELIX 17 AB8 GLN A 393 GLY A 397 5 5 HELIX 18 AB9 ASP A 458 TYR A 466 1 9 HELIX 19 AC1 GLY A 504 SER A 514 1 11 HELIX 20 AC2 ASP A 548 ILE A 563 1 16 HELIX 21 AC3 SER A 564 LYS A 568 5 5 SHEET 1 AA1 2 ILE A 38 GLN A 41 0 SHEET 2 AA1 2 LYS A 50 GLN A 53 -1 O LYS A 50 N GLN A 41 SHEET 1 AA2 2 LEU A 56 LEU A 57 0 SHEET 2 AA2 2 MET A 231 ASN A 232 -1 O MET A 231 N LEU A 57 SHEET 1 AA3 7 ASN A 87 THR A 91 0 SHEET 2 AA3 7 THR A 75 GLU A 80 -1 N TRP A 79 O LYS A 88 SHEET 3 AA3 7 THR A 304 PHE A 308 1 O MET A 307 N ILE A 78 SHEET 4 AA3 7 VAL A 278 CYS A 281 1 N PHE A 279 O THR A 304 SHEET 5 AA3 7 VAL A 331 THR A 334 1 O TYR A 333 N TRP A 280 SHEET 6 AA3 7 LEU A 360 SER A 363 1 O GLY A 362 N PHE A 332 SHEET 7 AA3 7 ILE A 387 ASP A 389 1 O VAL A 388 N LEU A 361 SHEET 1 AA4 5 ILE A 140 VAL A 143 0 SHEET 2 AA4 5 THR A 116 TYR A 120 1 N VAL A 117 O ILE A 140 SHEET 3 AA4 5 CYS A 164 ALA A 168 1 O ILE A 166 N TYR A 120 SHEET 4 AA4 5 THR A 194 VAL A 198 1 O THR A 194 N LEU A 165 SHEET 5 AA4 5 GLU A 212 TRP A 214 1 O HIS A 213 N VAL A 197 SHEET 1 AA5 2 PHE A 171 ARG A 173 0 SHEET 2 AA5 2 LYS A 176 ILE A 178 -1 O ILE A 178 N PHE A 171 SHEET 1 AA6 3 PRO A 236 THR A 242 0 SHEET 2 AA6 3 LYS A 250 THR A 255 -1 O HIS A 254 N LEU A 237 SHEET 3 AA6 3 THR A 454 ILE A 455 -1 O THR A 454 N VAL A 253 SHEET 1 AA7 4 PRO A 424 LEU A 427 0 SHEET 2 AA7 4 GLY A 438 ILE A 444 -1 O LEU A 441 N LEU A 427 SHEET 3 AA7 4 TYR A 471 ARG A 480 -1 O ASP A 476 N LEU A 442 SHEET 4 AA7 4 LEU A 467 SER A 468 -1 N SER A 468 O TYR A 471 SHEET 1 AA8 4 PRO A 424 LEU A 427 0 SHEET 2 AA8 4 GLY A 438 ILE A 444 -1 O LEU A 441 N LEU A 427 SHEET 3 AA8 4 TYR A 471 ARG A 480 -1 O ASP A 476 N LEU A 442 SHEET 4 AA8 4 TYR A 486 ARG A 491 -1 O TRP A 487 N LYS A 479 SHEET 1 AA9 2 LEU A 496 VAL A 498 0 SHEET 2 AA9 2 HIS A 501 LEU A 503 -1 O LEU A 503 N LEU A 496 SHEET 1 AB1 3 GLU A 520 HIS A 528 0 SHEET 2 AB1 3 GLY A 532 ILE A 540 -1 O TYR A 538 N GLY A 522 SHEET 3 AB1 3 VAL A 571 PHE A 574 1 O GLN A 573 N ALA A 537 CISPEP 1 LEU A 68 PRO A 69 0 -0.15 CISPEP 2 TRP A 314 PRO A 315 0 3.80 SITE 1 AC1 16 ILE A 288 THR A 289 GLY A 365 GLU A 366 SITE 2 AC1 16 PRO A 367 ASP A 389 THR A 390 TRP A 391 SITE 3 AC1 16 TRP A 392 GLN A 393 THR A 394 ASP A 476 SITE 4 AC1 16 ARG A 491 ARG A 502 HOH A 865 HOH A 872 SITE 1 AC2 4 ALA A 283 TRP A 287 THR A 289 VAL A 364 CRYST1 74.930 74.930 228.790 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013346 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013346 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004371 0.00000