HEADER HYDROLASE 30-APR-21 7MN9 TITLE PTP1B 1-284 F225Y-R199N COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN-TYROSINE PHOSPHATASE 1B,PTP-1B; COMPND 5 EC: 3.1.3.48; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PTPN1, PTP1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEIN TYROSINE PHOSPHATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.R.TORGESON,R.PAGE,W.PETI REVDAT 3 18-OCT-23 7MN9 1 REMARK REVDAT 2 24-AUG-22 7MN9 1 JRNL REVDAT 1 18-MAY-22 7MN9 0 JRNL AUTH K.R.TORGESON,M.W.CLARKSON,D.GRANATA,K.LINDORFF-LARSEN, JRNL AUTH 2 R.PAGE,W.PETI JRNL TITL CONSERVED CONFORMATIONAL DYNAMICS DETERMINE ENZYME ACTIVITY. JRNL REF SCI ADV V. 8 O5546 2022 JRNL REFN ESSN 2375-2548 JRNL PMID 35921420 JRNL DOI 10.1126/SCIADV.ABO5546 REMARK 2 REMARK 2 RESOLUTION. 1.24 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.24 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 92145 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.250 REMARK 3 FREE R VALUE TEST SET COUNT : 4841 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.3100 - 3.8600 1.00 3071 185 0.1627 0.1775 REMARK 3 2 3.8600 - 3.0600 1.00 3012 149 0.1496 0.1725 REMARK 3 3 3.0600 - 2.6800 1.00 2939 167 0.1633 0.1815 REMARK 3 4 2.6800 - 2.4300 1.00 2942 171 0.1648 0.1906 REMARK 3 5 2.4300 - 2.2600 1.00 2901 180 0.1615 0.1753 REMARK 3 6 2.2600 - 2.1200 1.00 2923 170 0.1438 0.1818 REMARK 3 7 2.1200 - 2.0200 1.00 2905 182 0.1512 0.1690 REMARK 3 8 2.0200 - 1.9300 1.00 2901 180 0.1526 0.1463 REMARK 3 9 1.9300 - 1.8600 0.99 2888 179 0.1513 0.1816 REMARK 3 10 1.8600 - 1.7900 1.00 2911 164 0.1552 0.1638 REMARK 3 11 1.7900 - 1.7400 1.00 2891 171 0.1487 0.1995 REMARK 3 12 1.7400 - 1.6900 1.00 2910 172 0.1534 0.1784 REMARK 3 13 1.6900 - 1.6400 1.00 2889 167 0.1503 0.1607 REMARK 3 14 1.6400 - 1.6000 1.00 2906 145 0.1516 0.1958 REMARK 3 15 1.6000 - 1.5600 1.00 2898 161 0.1539 0.1705 REMARK 3 16 1.5600 - 1.5300 0.99 2901 140 0.1521 0.1629 REMARK 3 17 1.5300 - 1.5000 0.99 2876 161 0.1642 0.1922 REMARK 3 18 1.5000 - 1.4700 1.00 2876 176 0.1650 0.1738 REMARK 3 19 1.4700 - 1.4500 1.00 2892 155 0.1671 0.1690 REMARK 3 20 1.4500 - 1.4200 1.00 2936 150 0.1810 0.2007 REMARK 3 21 1.4200 - 1.4000 1.00 2917 137 0.1842 0.1827 REMARK 3 22 1.4000 - 1.3800 1.00 2866 153 0.1890 0.1874 REMARK 3 23 1.3800 - 1.3600 1.00 2907 158 0.1904 0.2067 REMARK 3 24 1.3600 - 1.3400 1.00 2920 136 0.1996 0.1869 REMARK 3 25 1.3400 - 1.3200 1.00 2906 140 0.2060 0.2483 REMARK 3 26 1.3200 - 1.3000 1.00 2854 165 0.2172 0.2391 REMARK 3 27 1.3000 - 1.2900 1.00 2911 133 0.2166 0.2287 REMARK 3 28 1.2900 - 1.2700 1.00 2889 178 0.2309 0.2001 REMARK 3 29 1.2700 - 1.2600 1.00 2859 147 0.2474 0.2346 REMARK 3 30 1.2600 - 1.2400 1.00 2907 169 0.2571 0.2783 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.111 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.302 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 2424 REMARK 3 ANGLE : 1.494 3292 REMARK 3 CHIRALITY : 0.111 353 REMARK 3 PLANARITY : 0.010 428 REMARK 3 DIHEDRAL : 14.739 924 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -27.2419 18.0240 4.2370 REMARK 3 T TENSOR REMARK 3 T11: 0.1265 T22: 0.0863 REMARK 3 T33: 0.0919 T12: -0.0287 REMARK 3 T13: -0.0167 T23: 0.0229 REMARK 3 L TENSOR REMARK 3 L11: 0.6657 L22: 1.0535 REMARK 3 L33: 0.4204 L12: 0.2991 REMARK 3 L13: 0.1540 L23: -0.0677 REMARK 3 S TENSOR REMARK 3 S11: 0.0923 S12: -0.0503 S13: -0.0768 REMARK 3 S21: 0.0961 S22: -0.0972 S23: -0.1173 REMARK 3 S31: 0.0560 S32: 0.0177 S33: -0.0016 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7MN9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1000256466. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : .97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 92834 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.240 REMARK 200 RESOLUTION RANGE LOW (A) : 38.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.26 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.60700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.18.2_3874 REMARK 200 STARTING MODEL: 5K9V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, .1 M TRIS PH 7.6, 18.5% REMARK 280 PEG, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.28600 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.14300 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 24.14300 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 48.28600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 HIS A -3 REMARK 465 MET A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 ILE A 281 REMARK 465 MET A 282 REMARK 465 GLY A 283 REMARK 465 ASP A 284 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 5 CG CD CE NZ REMARK 470 GLU A 6 CG CD OE1 OE2 REMARK 470 GLU A 8 CG CD OE1 OE2 REMARK 470 GLN A 9 CG CD OE1 NE2 REMARK 470 LYS A 12 CG CD CE NZ REMARK 470 GLU A 186 CG CD OE1 OE2 REMARK 470 GLU A 207 CG CD OE1 OE2 REMARK 470 LYS A 239 CG CD CE NZ REMARK 470 LYS A 279 CG CD CE NZ REMARK 470 PHE A 280 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 203 O HOH A 401 1.76 REMARK 500 O HOH A 421 O HOH A 498 1.80 REMARK 500 O HOH A 609 O HOH A 708 1.83 REMARK 500 O HOH A 408 O HOH A 486 1.88 REMARK 500 OD1 ASN A 42 O HOH A 402 1.90 REMARK 500 O HOH A 427 O HOH A 527 1.91 REMARK 500 O HOH A 409 O HOH A 586 1.92 REMARK 500 O HOH A 526 O HOH A 632 1.93 REMARK 500 O HOH A 708 O HOH A 752 1.95 REMARK 500 OE2 GLU A 167 O HOH A 403 1.98 REMARK 500 O HOH A 529 O HOH A 718 2.00 REMARK 500 O HOH A 436 O HOH A 689 2.04 REMARK 500 O HOH A 452 O HOH A 551 2.04 REMARK 500 OE1 GLN A 262 O HOH A 404 2.05 REMARK 500 OH TYR A 225 O HOH A 405 2.05 REMARK 500 O HOH A 419 O HOH A 717 2.06 REMARK 500 OD1 ASP A 48 O HOH A 406 2.07 REMARK 500 O HOH A 596 O HOH A 733 2.08 REMARK 500 ND2 ASN A 42 O HOH A 407 2.09 REMARK 500 O HOH A 547 O HOH A 657 2.11 REMARK 500 O HOH A 639 O HOH A 718 2.12 REMARK 500 O HOH A 501 O HOH A 712 2.12 REMARK 500 O PHE A 256 O HOH A 408 2.12 REMARK 500 O HOH A 755 O HOH A 757 2.15 REMARK 500 O HOH A 551 O HOH A 738 2.15 REMARK 500 O HOH A 731 O HOH A 749 2.17 REMARK 500 O HOH A 406 O HOH A 669 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 525 O HOH A 718 4565 1.97 REMARK 500 O HOH A 623 O HOH A 718 4565 2.08 REMARK 500 O HOH A 654 O HOH A 656 3455 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 43 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ASP A 245 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 121 148.40 -170.08 REMARK 500 CYS A 215 -133.56 -136.18 REMARK 500 CYS A 215 -133.01 -136.18 REMARK 500 ILE A 219 -31.21 -133.53 REMARK 500 ILE A 261 109.09 71.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 757 DISTANCE = 6.22 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TRS A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 306 DBREF 7MN9 A 1 284 UNP P18031 PTN1_HUMAN 1 284 SEQADV 7MN9 GLY A -4 UNP P18031 EXPRESSION TAG SEQADV 7MN9 HIS A -3 UNP P18031 EXPRESSION TAG SEQADV 7MN9 MET A -2 UNP P18031 EXPRESSION TAG SEQADV 7MN9 ALA A -1 UNP P18031 EXPRESSION TAG SEQADV 7MN9 SER A 0 UNP P18031 EXPRESSION TAG SEQADV 7MN9 ASN A 199 UNP P18031 ARG 199 ENGINEERED MUTATION SEQADV 7MN9 TYR A 225 UNP P18031 PHE 225 ENGINEERED MUTATION SEQRES 1 A 289 GLY HIS MET ALA SER MET GLU MET GLU LYS GLU PHE GLU SEQRES 2 A 289 GLN ILE ASP LYS SER GLY SER TRP ALA ALA ILE TYR GLN SEQRES 3 A 289 ASP ILE ARG HIS GLU ALA SER ASP PHE PRO CYS ARG VAL SEQRES 4 A 289 ALA LYS LEU PRO LYS ASN LYS ASN ARG ASN ARG TYR ARG SEQRES 5 A 289 ASP VAL SER PRO PHE ASP HIS SER ARG ILE LYS LEU HIS SEQRES 6 A 289 GLN GLU ASP ASN ASP TYR ILE ASN ALA SER LEU ILE LYS SEQRES 7 A 289 MET GLU GLU ALA GLN ARG SER TYR ILE LEU THR GLN GLY SEQRES 8 A 289 PRO LEU PRO ASN THR CYS GLY HIS PHE TRP GLU MET VAL SEQRES 9 A 289 TRP GLU GLN LYS SER ARG GLY VAL VAL MET LEU ASN ARG SEQRES 10 A 289 VAL MET GLU LYS GLY SER LEU LYS CYS ALA GLN TYR TRP SEQRES 11 A 289 PRO GLN LYS GLU GLU LYS GLU MET ILE PHE GLU ASP THR SEQRES 12 A 289 ASN LEU LYS LEU THR LEU ILE SER GLU ASP ILE LYS SER SEQRES 13 A 289 TYR TYR THR VAL ARG GLN LEU GLU LEU GLU ASN LEU THR SEQRES 14 A 289 THR GLN GLU THR ARG GLU ILE LEU HIS PHE HIS TYR THR SEQRES 15 A 289 THR TRP PRO ASP PHE GLY VAL PRO GLU SER PRO ALA SER SEQRES 16 A 289 PHE LEU ASN PHE LEU PHE LYS VAL ASN GLU SER GLY SER SEQRES 17 A 289 LEU SER PRO GLU HIS GLY PRO VAL VAL VAL HIS CYS SER SEQRES 18 A 289 ALA GLY ILE GLY ARG SER GLY THR TYR CYS LEU ALA ASP SEQRES 19 A 289 THR CYS LEU LEU LEU MET ASP LYS ARG LYS ASP PRO SER SEQRES 20 A 289 SER VAL ASP ILE LYS LYS VAL LEU LEU GLU MET ARG LYS SEQRES 21 A 289 PHE ARG MET GLY LEU ILE GLN THR ALA ASP GLN LEU ARG SEQRES 22 A 289 PHE SER TYR LEU ALA VAL ILE GLU GLY ALA LYS PHE ILE SEQRES 23 A 289 MET GLY ASP HET GOL A 301 6 HET GOL A 302 6 HET GOL A 303 6 HET TRS A 304 8 HET CL A 305 1 HET CL A 306 1 HETNAM GOL GLYCEROL HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN TRS TRIS BUFFER FORMUL 2 GOL 3(C3 H8 O3) FORMUL 5 TRS C4 H12 N O3 1+ FORMUL 6 CL 2(CL 1-) FORMUL 8 HOH *357(H2 O) HELIX 1 AA1 MET A 1 GLY A 14 1 14 HELIX 2 AA2 SER A 15 ALA A 27 1 13 HELIX 3 AA3 LEU A 37 ASN A 44 5 8 HELIX 4 AA4 PHE A 52 HIS A 54 5 3 HELIX 5 AA5 THR A 91 LYS A 103 1 13 HELIX 6 AA6 PRO A 188 SER A 201 1 14 HELIX 7 AA7 GLY A 220 ASP A 236 1 17 HELIX 8 AA8 ASP A 240 VAL A 244 5 5 HELIX 9 AA9 ASP A 245 ARG A 254 1 10 HELIX 10 AB1 THR A 263 PHE A 280 1 18 SHEET 1 AA1 9 ARG A 56 LYS A 58 0 SHEET 2 AA1 9 TYR A 66 MET A 74 -1 O ALA A 69 N ILE A 57 SHEET 3 AA1 9 ARG A 79 THR A 84 -1 O TYR A 81 N ILE A 72 SHEET 4 AA1 9 VAL A 211 HIS A 214 1 O VAL A 213 N ILE A 82 SHEET 5 AA1 9 GLY A 106 MET A 109 1 N VAL A 108 O VAL A 212 SHEET 6 AA1 9 THR A 168 TYR A 176 1 O PHE A 174 N VAL A 107 SHEET 7 AA1 9 TYR A 153 ASN A 162 -1 N THR A 154 O HIS A 175 SHEET 8 AA1 9 LEU A 140 ILE A 149 -1 N LYS A 141 O GLU A 161 SHEET 9 AA1 9 MET A 133 PHE A 135 -1 N PHE A 135 O LEU A 140 SHEET 1 AA2 2 MET A 114 GLU A 115 0 SHEET 2 AA2 2 SER A 118 LEU A 119 -1 O SER A 118 N GLU A 115 SITE 1 AC1 7 PRO A 89 CYS A 92 MET A 133 PHE A 135 SITE 2 AC1 7 HOH A 456 HOH A 495 HOH A 594 SITE 1 AC2 6 GLU A 76 LYS A 248 GLU A 252 HOH A 460 SITE 2 AC2 6 HOH A 482 HOH A 523 SITE 1 AC3 3 LEU A 172 SER A 201 HOH A 618 SITE 1 AC4 5 HIS A 54 LYS A 128 GLU A 129 GLU A 130 SITE 2 AC4 5 HOH A 562 SITE 1 AC5 3 PRO A 38 LYS A 39 HOH A 748 SITE 1 AC6 3 ARG A 24 ARG A 254 GLN A 262 CRYST1 88.464 88.464 72.429 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011304 0.006526 0.000000 0.00000 SCALE2 0.000000 0.013053 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013807 0.00000