HEADER TRANSPORT PROTEIN 01-MAY-21 7MNV TITLE CRYSTAL STRUCTURE OF THE ZNF8 OF NUCLEOPORIN NUP358/RANBP2 IN COMPLEX TITLE 2 WITH RAN-GDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP-BINDING NUCLEAR PROTEIN RAN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ANDROGEN RECEPTOR-ASSOCIATED PROTEIN 24,GTPASE RAN,RAS-LIKE COMPND 5 PROTEIN TC4,RAS-RELATED NUCLEAR PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: E3 SUMO-PROTEIN LIGASE RANBP2; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: 358 KDA NUCLEOPORIN,NUCLEAR PORE COMPLEX PROTEIN NUP358, COMPND 12 NUCLEOPORIN NUP358,RAN-BINDING PROTEIN 2,RANBP2,P270; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAN, ARA24, OK/SW-CL.81; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: RANBP2, NUP358; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEAR PORE COMPLEX COMPONENT, NUCLEOCYTOPLASMIC TRANSPORT, KEYWDS 2 TRANSPORT PROTEIN, ZINC FINGER EXPDTA X-RAY DIFFRACTION AUTHOR C.J.BLEY,S.NIE,G.W.MOBBS,S.PETROVIC,A.T.GRES,X.LIU,S.MUKHERJEE, AUTHOR 2 S.HARVEY,F.M.HUBER,D.H.LIN,B.BROWN,A.W.TANG,E.J.RUNDLET,A.R.CORREIA, AUTHOR 3 S.CHEN,S.G.REGMI,T.A.STEVENS,C.A.JETTE,M.DASSO,A.PATKE,A.F.PALAZZO, AUTHOR 4 A.A.KOSSIAKOFF,A.HOELZ REVDAT 3 22-MAY-24 7MNV 1 REMARK REVDAT 2 22-JUN-22 7MNV 1 JRNL REVDAT 1 15-JUN-22 7MNV 0 JRNL AUTH C.J.BLEY,S.NIE,G.W.MOBBS,S.PETROVIC,A.T.GRES,X.LIU, JRNL AUTH 2 S.MUKHERJEE,S.HARVEY,F.M.HUBER,D.H.LIN,B.BROWN,A.W.TANG, JRNL AUTH 3 E.J.RUNDLET,A.R.CORREIA,S.CHEN,S.G.REGMI,T.A.STEVENS, JRNL AUTH 4 C.A.JETTE,M.DASSO,A.PATKE,A.F.PALAZZO,A.A.KOSSIAKOFF,A.HOELZ JRNL TITL ARCHITECTURE OF THE CYTOPLASMIC FACE OF THE NUCLEAR PORE. JRNL REF SCIENCE V. 376 M9129 2022 JRNL REFN ESSN 1095-9203 JRNL PMID 35679405 JRNL DOI 10.1126/SCIENCE.ABM9129 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 26877 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.290 REMARK 3 FREE R VALUE TEST SET COUNT : 1422 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.3000 - 3.8800 1.00 2729 141 0.1525 0.1750 REMARK 3 2 3.8700 - 3.0800 1.00 2587 151 0.1494 0.1607 REMARK 3 3 3.0800 - 2.6900 1.00 2579 136 0.1523 0.1658 REMARK 3 4 2.6900 - 2.4400 1.00 2539 153 0.1476 0.2043 REMARK 3 5 2.4400 - 2.2700 1.00 2536 141 0.1476 0.1738 REMARK 3 6 2.2700 - 2.1300 1.00 2534 150 0.1524 0.2073 REMARK 3 7 2.1300 - 2.0300 1.00 2513 138 0.1744 0.1926 REMARK 3 8 2.0300 - 1.9400 1.00 2507 146 0.1954 0.2596 REMARK 3 9 1.9400 - 1.8600 1.00 2530 128 0.2317 0.2692 REMARK 3 10 1.8600 - 1.8000 0.96 2401 138 0.2796 0.2988 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 29 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0992 15.9617 24.2859 REMARK 3 T TENSOR REMARK 3 T11: 0.2134 T22: 0.2085 REMARK 3 T33: 0.2125 T12: -0.0153 REMARK 3 T13: -0.0042 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 2.7916 L22: 0.8112 REMARK 3 L33: 1.3394 L12: -0.1590 REMARK 3 L13: 0.2402 L23: 0.9041 REMARK 3 S TENSOR REMARK 3 S11: 0.0679 S12: -0.2691 S13: -0.0890 REMARK 3 S21: 0.0384 S22: 0.0893 S23: 0.0534 REMARK 3 S31: 0.0886 S32: -0.0821 S33: -0.1733 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 30 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3199 15.4957 29.2268 REMARK 3 T TENSOR REMARK 3 T11: 0.2543 T22: 0.2568 REMARK 3 T33: 0.2376 T12: 0.0043 REMARK 3 T13: 0.0002 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.9170 L22: 1.9352 REMARK 3 L33: 1.0437 L12: -0.0052 REMARK 3 L13: -0.3924 L23: 0.2775 REMARK 3 S TENSOR REMARK 3 S11: -0.0524 S12: -0.1722 S13: 0.0085 REMARK 3 S21: 0.1689 S22: 0.0835 S23: 0.0353 REMARK 3 S31: -0.0513 S32: 0.0069 S33: -0.0248 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9925 28.9339 20.1068 REMARK 3 T TENSOR REMARK 3 T11: 0.3363 T22: 0.2336 REMARK 3 T33: 0.3952 T12: -0.0330 REMARK 3 T13: 0.0231 T23: 0.0056 REMARK 3 L TENSOR REMARK 3 L11: 2.4873 L22: 1.5651 REMARK 3 L33: 2.2415 L12: -0.2556 REMARK 3 L13: 0.0621 L23: -0.4472 REMARK 3 S TENSOR REMARK 3 S11: 0.0332 S12: 0.0231 S13: 0.4916 REMARK 3 S21: -0.0160 S22: 0.0082 S23: -0.1016 REMARK 3 S31: -0.3587 S32: 0.0501 S33: 0.0199 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4539 26.4597 7.0473 REMARK 3 T TENSOR REMARK 3 T11: 0.4635 T22: 0.3675 REMARK 3 T33: 0.3306 T12: -0.0142 REMARK 3 T13: 0.0271 T23: 0.1229 REMARK 3 L TENSOR REMARK 3 L11: 3.2447 L22: 3.6911 REMARK 3 L33: 2.5029 L12: 0.4688 REMARK 3 L13: -0.5646 L23: -0.1768 REMARK 3 S TENSOR REMARK 3 S11: -0.0236 S12: 0.5779 S13: 0.7237 REMARK 3 S21: -0.7245 S22: -0.0276 S23: -0.0890 REMARK 3 S31: -0.6253 S32: 0.1326 S33: 0.0495 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.9594 20.5943 12.3577 REMARK 3 T TENSOR REMARK 3 T11: 0.3002 T22: 0.2990 REMARK 3 T33: 0.3130 T12: -0.0263 REMARK 3 T13: 0.0234 T23: 0.0274 REMARK 3 L TENSOR REMARK 3 L11: 3.7992 L22: 3.9129 REMARK 3 L33: 3.5992 L12: -0.1905 REMARK 3 L13: -0.0674 L23: 0.8868 REMARK 3 S TENSOR REMARK 3 S11: -0.0853 S12: 0.2295 S13: 0.6455 REMARK 3 S21: -0.3547 S22: 0.1689 S23: -0.3194 REMARK 3 S31: -0.4058 S32: 0.2478 S33: -0.0462 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 157 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5395 9.6070 16.6192 REMARK 3 T TENSOR REMARK 3 T11: 0.2697 T22: 0.2756 REMARK 3 T33: 0.2868 T12: -0.0190 REMARK 3 T13: 0.0143 T23: -0.0191 REMARK 3 L TENSOR REMARK 3 L11: 1.6957 L22: 1.2385 REMARK 3 L33: 1.0842 L12: 0.5281 REMARK 3 L13: 0.1510 L23: 0.0719 REMARK 3 S TENSOR REMARK 3 S11: -0.0968 S12: 0.2605 S13: -0.1004 REMARK 3 S21: -0.2186 S22: 0.1002 S23: -0.0845 REMARK 3 S31: 0.0246 S32: 0.0937 S33: -0.0045 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 189 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4939 21.6009 1.3497 REMARK 3 T TENSOR REMARK 3 T11: 0.5387 T22: 0.5590 REMARK 3 T33: 0.3322 T12: -0.0369 REMARK 3 T13: 0.1077 T23: 0.0688 REMARK 3 L TENSOR REMARK 3 L11: 3.9791 L22: 4.7068 REMARK 3 L33: 3.3364 L12: 1.1305 REMARK 3 L13: -0.5756 L23: 0.0671 REMARK 3 S TENSOR REMARK 3 S11: -0.2564 S12: 0.9271 S13: 0.4045 REMARK 3 S21: -0.9295 S22: 0.3723 S23: -0.2629 REMARK 3 S31: -0.4764 S32: 0.0314 S33: -0.1093 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1772 THROUGH 1777 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7638 0.9357 28.7352 REMARK 3 T TENSOR REMARK 3 T11: 0.7902 T22: 0.7527 REMARK 3 T33: 1.3018 T12: 0.0100 REMARK 3 T13: -0.0349 T23: -0.0452 REMARK 3 L TENSOR REMARK 3 L11: 9.4728 L22: 7.6505 REMARK 3 L33: 5.1362 L12: 6.6019 REMARK 3 L13: 0.6150 L23: -2.6332 REMARK 3 S TENSOR REMARK 3 S11: 0.5719 S12: -0.4968 S13: -0.8004 REMARK 3 S21: 0.0036 S22: 0.0708 S23: -0.4240 REMARK 3 S31: 0.0222 S32: -0.3993 S33: -0.3696 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1778 THROUGH 1782 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3155 7.7427 39.3161 REMARK 3 T TENSOR REMARK 3 T11: 1.2283 T22: 1.5645 REMARK 3 T33: 1.0850 T12: -0.1245 REMARK 3 T13: 0.2190 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 0.3450 L22: 0.3628 REMARK 3 L33: 4.3948 L12: -0.3443 REMARK 3 L13: -1.2320 L23: 1.2280 REMARK 3 S TENSOR REMARK 3 S11: 0.2973 S12: 0.4781 S13: 0.3325 REMARK 3 S21: -0.3453 S22: 0.6207 S23: -0.1029 REMARK 3 S31: 0.8379 S32: -0.0086 S33: -0.4817 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1783 THROUGH 1792 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8393 11.7591 40.8712 REMARK 3 T TENSOR REMARK 3 T11: 0.3723 T22: 0.5231 REMARK 3 T33: 0.3815 T12: 0.0688 REMARK 3 T13: 0.0211 T23: 0.0801 REMARK 3 L TENSOR REMARK 3 L11: 7.6834 L22: 4.0526 REMARK 3 L33: 4.6615 L12: -0.4555 REMARK 3 L13: 1.7988 L23: -0.4111 REMARK 3 S TENSOR REMARK 3 S11: -0.4280 S12: -0.3718 S13: -1.1100 REMARK 3 S21: 0.3284 S22: 0.0334 S23: -0.6102 REMARK 3 S31: 0.0565 S32: 0.8729 S33: 0.4418 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1793 THROUGH 1800 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8481 16.0523 45.7791 REMARK 3 T TENSOR REMARK 3 T11: 0.4576 T22: 0.8256 REMARK 3 T33: 0.3746 T12: -0.0226 REMARK 3 T13: -0.0318 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 5.4555 L22: 3.4867 REMARK 3 L33: 6.0129 L12: 0.4456 REMARK 3 L13: -0.6350 L23: -0.8569 REMARK 3 S TENSOR REMARK 3 S11: 0.3509 S12: -0.1672 S13: 0.0707 REMARK 3 S21: 0.1220 S22: -0.3643 S23: -0.7637 REMARK 3 S31: 0.3108 S32: 1.1469 S33: 0.0538 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1801 THROUGH 1809 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.7884 16.1607 45.4886 REMARK 3 T TENSOR REMARK 3 T11: 0.4001 T22: 0.5250 REMARK 3 T33: 0.3302 T12: -0.0330 REMARK 3 T13: -0.0032 T23: 0.0328 REMARK 3 L TENSOR REMARK 3 L11: 6.1451 L22: 1.3300 REMARK 3 L33: 5.6699 L12: -0.8382 REMARK 3 L13: 0.9042 L23: 0.4774 REMARK 3 S TENSOR REMARK 3 S11: -0.1405 S12: -0.5541 S13: -0.5691 REMARK 3 S21: 0.8913 S22: -0.0138 S23: 0.1004 REMARK 3 S31: -0.3209 S32: 0.3111 S33: 0.2227 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7MNV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1000256561. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2825 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26934 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 29.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 12.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 19% (W/V) PEG 3350; 0.1 M BIS-TRIS, PH REMARK 280 6.7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 30.23500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.23500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.23500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.23500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 501 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 GLN A 4 REMARK 465 GLY A 5 REMARK 465 GLU A 6 REMARK 465 PRO A 210 REMARK 465 ASP A 211 REMARK 465 GLU A 212 REMARK 465 ASP A 213 REMARK 465 ASP A 214 REMARK 465 ASP A 215 REMARK 465 LEU A 216 REMARK 465 GLY B 1769 REMARK 465 PRO B 1770 REMARK 465 LEU B 1771 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 113 -155.88 57.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 24 OG1 REMARK 620 2 GDP A 301 O3B 93.6 REMARK 620 3 HOH A 416 O 175.5 90.0 REMARK 620 4 HOH A 449 O 87.5 98.6 89.5 REMARK 620 5 HOH A 464 O 91.2 85.6 91.6 175.6 REMARK 620 6 HOH A 478 O 85.5 171.8 91.2 89.5 86.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1787 SG REMARK 620 2 CYS B1790 SG 114.7 REMARK 620 3 CYS B1801 SG 109.8 102.4 REMARK 620 4 CYS B1804 SG 99.0 117.5 113.9 REMARK 620 N 1 2 3 DBREF 7MNV A 1 216 UNP P62826 RAN_HUMAN 1 216 DBREF 7MNV B 1773 1809 UNP P49792 RBP2_HUMAN 1773 1809 SEQADV 7MNV MET A -19 UNP P62826 EXPRESSION TAG SEQADV 7MNV GLY A -18 UNP P62826 EXPRESSION TAG SEQADV 7MNV SER A -17 UNP P62826 EXPRESSION TAG SEQADV 7MNV SER A -16 UNP P62826 EXPRESSION TAG SEQADV 7MNV HIS A -15 UNP P62826 EXPRESSION TAG SEQADV 7MNV HIS A -14 UNP P62826 EXPRESSION TAG SEQADV 7MNV HIS A -13 UNP P62826 EXPRESSION TAG SEQADV 7MNV HIS A -12 UNP P62826 EXPRESSION TAG SEQADV 7MNV HIS A -11 UNP P62826 EXPRESSION TAG SEQADV 7MNV HIS A -10 UNP P62826 EXPRESSION TAG SEQADV 7MNV SER A -9 UNP P62826 EXPRESSION TAG SEQADV 7MNV SER A -8 UNP P62826 EXPRESSION TAG SEQADV 7MNV GLY A -7 UNP P62826 EXPRESSION TAG SEQADV 7MNV LEU A -6 UNP P62826 EXPRESSION TAG SEQADV 7MNV VAL A -5 UNP P62826 EXPRESSION TAG SEQADV 7MNV PRO A -4 UNP P62826 EXPRESSION TAG SEQADV 7MNV ARG A -3 UNP P62826 EXPRESSION TAG SEQADV 7MNV GLY A -2 UNP P62826 EXPRESSION TAG SEQADV 7MNV SER A -1 UNP P62826 EXPRESSION TAG SEQADV 7MNV HIS A 0 UNP P62826 EXPRESSION TAG SEQADV 7MNV SER A 35 UNP P62826 PHE 35 ENGINEERED MUTATION SEQADV 7MNV GLY B 1769 UNP P49792 EXPRESSION TAG SEQADV 7MNV PRO B 1770 UNP P49792 EXPRESSION TAG SEQADV 7MNV LEU B 1771 UNP P49792 EXPRESSION TAG SEQADV 7MNV GLY B 1772 UNP P49792 EXPRESSION TAG SEQRES 1 A 236 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 236 LEU VAL PRO ARG GLY SER HIS MET ALA ALA GLN GLY GLU SEQRES 3 A 236 PRO GLN VAL GLN PHE LYS LEU VAL LEU VAL GLY ASP GLY SEQRES 4 A 236 GLY THR GLY LYS THR THR PHE VAL LYS ARG HIS LEU THR SEQRES 5 A 236 GLY GLU SER GLU LYS LYS TYR VAL ALA THR LEU GLY VAL SEQRES 6 A 236 GLU VAL HIS PRO LEU VAL PHE HIS THR ASN ARG GLY PRO SEQRES 7 A 236 ILE LYS PHE ASN VAL TRP ASP THR ALA GLY GLN GLU LYS SEQRES 8 A 236 PHE GLY GLY LEU ARG ASP GLY TYR TYR ILE GLN ALA GLN SEQRES 9 A 236 CYS ALA ILE ILE MET PHE ASP VAL THR SER ARG VAL THR SEQRES 10 A 236 TYR LYS ASN VAL PRO ASN TRP HIS ARG ASP LEU VAL ARG SEQRES 11 A 236 VAL CYS GLU ASN ILE PRO ILE VAL LEU CYS GLY ASN LYS SEQRES 12 A 236 VAL ASP ILE LYS ASP ARG LYS VAL LYS ALA LYS SER ILE SEQRES 13 A 236 VAL PHE HIS ARG LYS LYS ASN LEU GLN TYR TYR ASP ILE SEQRES 14 A 236 SER ALA LYS SER ASN TYR ASN PHE GLU LYS PRO PHE LEU SEQRES 15 A 236 TRP LEU ALA ARG LYS LEU ILE GLY ASP PRO ASN LEU GLU SEQRES 16 A 236 PHE VAL ALA MET PRO ALA LEU ALA PRO PRO GLU VAL VAL SEQRES 17 A 236 MET ASP PRO ALA LEU ALA ALA GLN TYR GLU HIS ASP LEU SEQRES 18 A 236 GLU VAL ALA GLN THR THR ALA LEU PRO ASP GLU ASP ASP SEQRES 19 A 236 ASP LEU SEQRES 1 B 41 GLY PRO LEU GLY SER GLY PHE GLU GLY MET PHE ILE ARG SEQRES 2 B 41 LYS GLY GLN TRP ASP CYS SER VAL CYS CYS VAL GLN ASN SEQRES 3 B 41 GLU SER SER SER LEU LYS CYS VAL ALA CYS ASP ALA SER SEQRES 4 B 41 LYS PRO HET GDP A 301 40 HET GOL A 302 13 HET MG A 303 1 HET ZN B1901 1 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETNAM ZN ZINC ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 GOL C3 H8 O3 FORMUL 5 MG MG 2+ FORMUL 6 ZN ZN 2+ FORMUL 7 HOH *200(H2 O) HELIX 1 AA1 GLY A 22 LYS A 28 1 7 HELIX 2 AA2 HIS A 30 GLU A 36 1 7 HELIX 3 AA3 GLY A 68 GLY A 73 5 6 HELIX 4 AA4 ARG A 76 ILE A 81 1 6 HELIX 5 AA5 SER A 94 ASN A 100 1 7 HELIX 6 AA6 ASN A 100 GLU A 113 1 14 HELIX 7 AA7 LYS A 132 ILE A 136 5 5 HELIX 8 AA8 VAL A 137 LYS A 142 1 6 HELIX 9 AA9 GLU A 158 GLY A 170 1 13 HELIX 10 AB1 ASP A 190 THR A 207 1 18 SHEET 1 AA1 7 LYS A 38 VAL A 40 0 SHEET 2 AA1 7 VAL A 45 THR A 54 -1 O VAL A 45 N VAL A 40 SHEET 3 AA1 7 GLY A 57 THR A 66 -1 O PHE A 61 N LEU A 50 SHEET 4 AA1 7 VAL A 9 VAL A 16 1 N PHE A 11 O ASN A 62 SHEET 5 AA1 7 CYS A 85 ASP A 91 1 O MET A 89 N VAL A 16 SHEET 6 AA1 7 ILE A 117 ASN A 122 1 O ASN A 122 N PHE A 90 SHEET 7 AA1 7 GLN A 145 ASP A 148 1 O GLN A 145 N LEU A 119 SHEET 1 AA2 2 TRP B1785 ASP B1786 0 SHEET 2 AA2 2 GLN B1793 ASN B1794 -1 O ASN B1794 N TRP B1785 LINK OG1 THR A 24 MG MG A 303 1555 1555 2.08 LINK O3B GDP A 301 MG MG A 303 1555 1555 1.98 LINK MG MG A 303 O HOH A 416 1555 1555 2.14 LINK MG MG A 303 O HOH A 449 1555 1555 2.05 LINK MG MG A 303 O HOH A 464 1555 1555 2.14 LINK MG MG A 303 O HOH A 478 1555 1555 2.07 LINK SG CYS B1787 ZN ZN B1901 1555 1555 2.40 LINK SG CYS B1790 ZN ZN B1901 1555 1555 2.27 LINK SG CYS B1801 ZN ZN B1901 1555 1555 2.33 LINK SG CYS B1804 ZN ZN B1901 1555 1555 2.35 CRYST1 60.470 80.470 58.320 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016537 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012427 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017147 0.00000