HEADER TRANSFERASE/TRANSCRIPTION 18-MAY-21 7MXC TITLE PRMT5:MEP50 COMPLEXED WITH ADENOSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN ARGININE N-METHYLTRANSFERASE 5; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 72 KDA ICLN-BINDING PROTEIN,HISTONE-ARGININE N- COMPND 5 METHYLTRANSFERASE PRMT5,JAK-BINDING PROTEIN 1,SHK1 KINASE-BINDING COMPND 6 PROTEIN 1 HOMOLOG,SKB1HS; COMPND 7 EC: 2.1.1.320; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: METHYLOSOME PROTEIN 50; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: MEP-50,ANDROGEN RECEPTOR COFACTOR P44,WD REPEAT-CONTAINING COMPND 13 PROTEIN 77,P44/MEP50; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PRMT5, HRMT1L5, IBP72, JBP1, SKB1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: WDR77, MEP50, WD45, HKMT1069, NBLA10071; SOURCE 13 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS ARGININE, METHYL, TRANSFERASE, TRANSFERASE-TRANSCRIPTION COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.MCTIGUE,Y.L.DENG,W.LIU,A.BROOUN REVDAT 3 18-OCT-23 7MXC 1 REMARK REVDAT 2 19-JAN-22 7MXC 1 JRNL REVDAT 1 17-NOV-21 7MXC 0 JRNL AUTH K.JENSEN-PERGAKES,J.TATLOCK,K.A.MAEGLEY,I.J.MCALPINE, JRNL AUTH 2 M.MCTIGUE,T.XIE,C.P.DILLON,Y.WANG,S.YAMAZAKI,N.SPIEGEL, JRNL AUTH 3 M.SHI,A.NEMETH,N.MILLER,E.HENDRICKSON,H.LAM,J.SHERRILL, JRNL AUTH 4 C.Y.CHUNG,E.A.MCMILLAN,S.K.BRYANT,P.PALDE,J.BRAGANZA, JRNL AUTH 5 A.BROOUN,Y.L.DENG,V.GOSHTASBI,S.E.KEPHART,R.A.KUMPF,W.LIU, JRNL AUTH 6 R.L.PATMAN,E.RUI,S.SCALES,M.TRAN-DUBE,F.WANG,M.WYTHES, JRNL AUTH 7 T.A.PAUL JRNL TITL SAM-COMPETITIVE PRMT5 INHIBITOR PF-06939999 DEMONSTRATES JRNL TITL 2 ANTITUMOR ACTIVITY IN SPLICING DYSREGULATED NSCLC WITH JRNL TITL 3 DECREASED LIABILITY OF DRUG RESISTANCE. JRNL REF MOL.CANCER THER. V. 21 3 2022 JRNL REFN ESSN 1538-8514 JRNL PMID 34737197 JRNL DOI 10.1158/1535-7163.MCT-21-0620 REMARK 2 REMARK 2 RESOLUTION. 2.41 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 109.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 47768 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.251 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.303 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2392 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.41 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.42 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.82 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3186 REMARK 3 BIN FREE R VALUE : 0.4624 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 48 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7285 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 214 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -37.41540 REMARK 3 B22 (A**2) : 7.33440 REMARK 3 B33 (A**2) : 30.08100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.460 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.386 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.285 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.390 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.289 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.847 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.805 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 7514 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 10238 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2535 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1284 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 7514 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 964 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6010 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.00 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.27 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 19.90 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7MXC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1000256983. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47892 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.410 REMARK 200 RESOLUTION RANGE LOW (A) : 109.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.10200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.41 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 0.70600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: BUSTER 2.11.7 REMARK 200 STARTING MODEL: 3GQB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZATION OF FULL-LENGTH HUMAN REMARK 280 PRMT5/MEP50 COMPLEXED WITH COFACTOR SITE INHIBITORS WAS REMARK 280 PERFORMED AT 13 DEGREES CELSIUS BY HANGING-DROP VAPOR-DIFFUSION REMARK 280 METHODS. 2.5 UL OF A SOLUTION OF 5:1 MOLAR RATIO OF INHIBITOR REMARK 280 COMPOUND TO PRMT5/MEP50 COMPLEX (13 MG/ML) WAS MIXED WITH 2.5 UL REMARK 280 OF RESERVOIR SOLUTION CONTAINING 13-15% (W/V) PEG3350, 0.1M MES, REMARK 280 PH 6.5-7.5, 0.25M NACL, AND 20% (V/V) ETHYLENE GLYCOL, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 286K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 49.96150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 68.97800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 88.97100 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 49.96150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 68.97800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 88.97100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 49.96150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 68.97800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 88.97100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 49.96150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 68.97800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 88.97100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 33150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 134690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -99.92300 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -137.95600 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -99.92300 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 -137.95600 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 MET A 4 REMARK 465 ALA A 5 REMARK 465 VAL A 6 REMARK 465 GLY A 7 REMARK 465 GLY A 8 REMARK 465 ALA A 9 REMARK 465 GLY A 10 REMARK 465 GLY A 11 REMARK 465 SER A 12 REMARK 465 GLU A 274 REMARK 465 LYS A 275 REMARK 465 GLU A 276 REMARK 465 PHE A 277 REMARK 465 MET B -23 REMARK 465 ALA B -22 REMARK 465 SER B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 ASP B -14 REMARK 465 TYR B -13 REMARK 465 ASP B -12 REMARK 465 GLY B -11 REMARK 465 ALA B -10 REMARK 465 THR B -9 REMARK 465 THR B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 GLN B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 LEU B 1 REMARK 465 ARG B 2 REMARK 465 LYS B 3 REMARK 465 GLU B 4 REMARK 465 THR B 5 REMARK 465 PRO B 6 REMARK 465 PRO B 7 REMARK 465 PRO B 8 REMARK 465 LEU B 9 REMARK 465 VAL B 10 REMARK 465 PRO B 11 REMARK 465 PRO B 12 REMARK 465 ALA B 13 REMARK 465 ALA B 14 REMARK 465 ARG B 15 REMARK 465 GLU B 16 REMARK 465 TRP B 17 REMARK 465 ASN B 18 REMARK 465 LEU B 19 REMARK 465 PRO B 20 REMARK 465 PRO B 21 REMARK 465 ASN B 22 REMARK 465 ALA B 23 REMARK 465 CYS B 208 REMARK 465 SER B 209 REMARK 465 ALA B 210 REMARK 465 PRO B 211 REMARK 465 SER B 244 REMARK 465 THR B 245 REMARK 465 SER B 246 REMARK 465 CYS B 247 REMARK 465 GLU B 330 REMARK 465 PRO B 331 REMARK 465 LEU B 332 REMARK 465 PRO B 333 REMARK 465 ALA B 334 REMARK 465 PRO B 335 REMARK 465 GLY B 336 REMARK 465 PRO B 337 REMARK 465 ALA B 338 REMARK 465 SER B 339 REMARK 465 VAL B 340 REMARK 465 THR B 341 REMARK 465 GLU B 342 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 61 24.57 -79.80 REMARK 500 HIS A 147 -121.79 -78.52 REMARK 500 SER A 148 -16.44 105.30 REMARK 500 THR A 174 109.21 -53.48 REMARK 500 HIS A 272 54.25 -114.46 REMARK 500 LYS A 329 44.71 -89.32 REMARK 500 ARG A 368 32.16 -94.35 REMARK 500 GLU A 408 -53.12 -136.63 REMARK 500 ALA A 441 -74.49 59.17 REMARK 500 LEU A 445 35.65 74.03 REMARK 500 ASP A 459 3.18 -61.48 REMARK 500 SER A 477 95.43 -162.59 REMARK 500 HIS A 507 -59.46 -144.38 REMARK 500 CYS A 518 -70.37 -113.07 REMARK 500 MET A 529 62.34 63.75 REMARK 500 ASP A 531 119.50 71.06 REMARK 500 GLN A 561 -109.56 49.16 REMARK 500 ARG B 29 -19.99 -48.32 REMARK 500 PRO B 68 37.14 -99.28 REMARK 500 VAL B 89 75.70 -115.61 REMARK 500 ILE B 127 127.65 -32.92 REMARK 500 SER B 135 -51.48 -19.72 REMARK 500 ASP B 146 4.57 -69.86 REMARK 500 ILE B 147 -23.53 82.18 REMARK 500 ALA B 168 -161.51 -115.09 REMARK 500 ASP B 196 94.89 -167.86 REMARK 500 SER B 225 11.94 -68.16 REMARK 500 HIS B 266 152.05 -44.37 REMARK 500 ASP B 284 -156.21 -82.00 REMARK 500 LEU B 290 -60.62 -109.18 REMARK 500 VAL B 323 132.81 -35.05 REMARK 500 PRO B 328 93.48 -69.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN A 701 DBREF 7MXC A 1 637 UNP O14744 ANM5_HUMAN 1 637 DBREF 7MXC B 2 342 UNP Q9BQA1 MEP50_HUMAN 2 342 SEQADV 7MXC MET B -23 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC ALA B -22 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC SER B -21 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC HIS B -20 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC HIS B -19 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC HIS B -18 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC HIS B -17 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC HIS B -16 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC HIS B -15 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC ASP B -14 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC TYR B -13 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC ASP B -12 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC GLY B -11 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC ALA B -10 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC THR B -9 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC THR B -8 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC GLU B -7 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC ASN B -6 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC LEU B -5 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC TYR B -4 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC PHE B -3 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC GLN B -2 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC GLY B -1 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC SER B 0 UNP Q9BQA1 EXPRESSION TAG SEQADV 7MXC LEU B 1 UNP Q9BQA1 EXPRESSION TAG SEQRES 1 A 637 MET ALA ALA MET ALA VAL GLY GLY ALA GLY GLY SER ARG SEQRES 2 A 637 VAL SER SER GLY ARG ASP LEU ASN CYS VAL PRO GLU ILE SEQRES 3 A 637 ALA ASP THR LEU GLY ALA VAL ALA LYS GLN GLY PHE ASP SEQRES 4 A 637 PHE LEU CYS MET PRO VAL PHE HIS PRO ARG PHE LYS ARG SEQRES 5 A 637 GLU PHE ILE GLN GLU PRO ALA LYS ASN ARG PRO GLY PRO SEQRES 6 A 637 GLN THR ARG SER ASP LEU LEU LEU SER GLY ARG ASP TRP SEQRES 7 A 637 ASN THR LEU ILE VAL GLY LYS LEU SER PRO TRP ILE ARG SEQRES 8 A 637 PRO ASP SER LYS VAL GLU LYS ILE ARG ARG ASN SER GLU SEQRES 9 A 637 ALA ALA MET LEU GLN GLU LEU ASN PHE GLY ALA TYR LEU SEQRES 10 A 637 GLY LEU PRO ALA PHE LEU LEU PRO LEU ASN GLN GLU ASP SEQRES 11 A 637 ASN THR ASN LEU ALA ARG VAL LEU THR ASN HIS ILE HIS SEQRES 12 A 637 THR GLY HIS HIS SER SER MET PHE TRP MET ARG VAL PRO SEQRES 13 A 637 LEU VAL ALA PRO GLU ASP LEU ARG ASP ASP ILE ILE GLU SEQRES 14 A 637 ASN ALA PRO THR THR HIS THR GLU GLU TYR SER GLY GLU SEQRES 15 A 637 GLU LYS THR TRP MET TRP TRP HIS ASN PHE ARG THR LEU SEQRES 16 A 637 CYS ASP TYR SER LYS ARG ILE ALA VAL ALA LEU GLU ILE SEQRES 17 A 637 GLY ALA ASP LEU PRO SER ASN HIS VAL ILE ASP ARG TRP SEQRES 18 A 637 LEU GLY GLU PRO ILE LYS ALA ALA ILE LEU PRO THR SER SEQRES 19 A 637 ILE PHE LEU THR ASN LYS LYS GLY PHE PRO VAL LEU SER SEQRES 20 A 637 LYS MET HIS GLN ARG LEU ILE PHE ARG LEU LEU LYS LEU SEQRES 21 A 637 GLU VAL GLN PHE ILE ILE THR GLY THR ASN HIS HIS SER SEQRES 22 A 637 GLU LYS GLU PHE CYS SER TYR LEU GLN TYR LEU GLU TYR SEQRES 23 A 637 LEU SER GLN ASN ARG PRO PRO PRO ASN ALA TYR GLU LEU SEQRES 24 A 637 PHE ALA LYS GLY TYR GLU ASP TYR LEU GLN SER PRO LEU SEQRES 25 A 637 GLN PRO LEU MET ASP ASN LEU GLU SER GLN THR TYR GLU SEQRES 26 A 637 VAL PHE GLU LYS ASP PRO ILE LYS TYR SER GLN TYR GLN SEQRES 27 A 637 GLN ALA ILE TYR LYS CYS LEU LEU ASP ARG VAL PRO GLU SEQRES 28 A 637 GLU GLU LYS ASP THR ASN VAL GLN VAL LEU MET VAL LEU SEQRES 29 A 637 GLY ALA GLY ARG GLY PRO LEU VAL ASN ALA SER LEU ARG SEQRES 30 A 637 ALA ALA LYS GLN ALA ASP ARG ARG ILE LYS LEU TYR ALA SEQRES 31 A 637 VAL GLU LYS ASN PRO ASN ALA VAL VAL THR LEU GLU ASN SEQRES 32 A 637 TRP GLN PHE GLU GLU TRP GLY SER GLN VAL THR VAL VAL SEQRES 33 A 637 SER SER ASP MET ARG GLU TRP VAL ALA PRO GLU LYS ALA SEQRES 34 A 637 ASP ILE ILE VAL SER GLU LEU LEU GLY SER PHE ALA ASP SEQRES 35 A 637 ASN GLU LEU SER PRO GLU CYS LEU ASP GLY ALA GLN HIS SEQRES 36 A 637 PHE LEU LYS ASP ASP GLY VAL SER ILE PRO GLY GLU TYR SEQRES 37 A 637 THR SER PHE LEU ALA PRO ILE SER SER SER LYS LEU TYR SEQRES 38 A 637 ASN GLU VAL ARG ALA CYS ARG GLU LYS ASP ARG ASP PRO SEQRES 39 A 637 GLU ALA GLN PHE GLU MET PRO TYR VAL VAL ARG LEU HIS SEQRES 40 A 637 ASN PHE HIS GLN LEU SER ALA PRO GLN PRO CYS PHE THR SEQRES 41 A 637 PHE SER HIS PRO ASN ARG ASP PRO MET ILE ASP ASN ASN SEQRES 42 A 637 ARG TYR CYS THR LEU GLU PHE PRO VAL GLU VAL ASN THR SEQRES 43 A 637 VAL LEU HIS GLY PHE ALA GLY TYR PHE GLU THR VAL LEU SEQRES 44 A 637 TYR GLN ASP ILE THR LEU SER ILE ARG PRO GLU THR HIS SEQRES 45 A 637 SER PRO GLY MET PHE SER TRP PHE PRO ILE LEU PHE PRO SEQRES 46 A 637 ILE LYS GLN PRO ILE THR VAL ARG GLU GLY GLN THR ILE SEQRES 47 A 637 CYS VAL ARG PHE TRP ARG CYS SER ASN SER LYS LYS VAL SEQRES 48 A 637 TRP TYR GLU TRP ALA VAL THR ALA PRO VAL CYS SER ALA SEQRES 49 A 637 ILE HIS ASN PRO THR GLY ARG SER TYR THR ILE GLY LEU SEQRES 1 B 366 MET ALA SER HIS HIS HIS HIS HIS HIS ASP TYR ASP GLY SEQRES 2 B 366 ALA THR THR GLU ASN LEU TYR PHE GLN GLY SER LEU ARG SEQRES 3 B 366 LYS GLU THR PRO PRO PRO LEU VAL PRO PRO ALA ALA ARG SEQRES 4 B 366 GLU TRP ASN LEU PRO PRO ASN ALA PRO ALA CYS MET GLU SEQRES 5 B 366 ARG GLN LEU GLU ALA ALA ARG TYR ARG SER ASP GLY ALA SEQRES 6 B 366 LEU LEU LEU GLY ALA SER SER LEU SER GLY ARG CYS TRP SEQRES 7 B 366 ALA GLY SER LEU TRP LEU PHE LYS ASP PRO CYS ALA ALA SEQRES 8 B 366 PRO ASN GLU GLY PHE CYS SER ALA GLY VAL GLN THR GLU SEQRES 9 B 366 ALA GLY VAL ALA ASP LEU THR TRP VAL GLY GLU ARG GLY SEQRES 10 B 366 ILE LEU VAL ALA SER ASP SER GLY ALA VAL GLU LEU TRP SEQRES 11 B 366 GLU LEU ASP GLU ASN GLU THR LEU ILE VAL SER LYS PHE SEQRES 12 B 366 CYS LYS TYR GLU HIS ASP ASP ILE VAL SER THR VAL SER SEQRES 13 B 366 VAL LEU SER SER GLY THR GLN ALA VAL SER GLY SER LYS SEQRES 14 B 366 ASP ILE CYS ILE LYS VAL TRP ASP LEU ALA GLN GLN VAL SEQRES 15 B 366 VAL LEU SER SER TYR ARG ALA HIS ALA ALA GLN VAL THR SEQRES 16 B 366 CYS VAL ALA ALA SER PRO HIS LYS ASP SER VAL PHE LEU SEQRES 17 B 366 SER CYS SER GLU ASP ASN ARG ILE LEU LEU TRP ASP THR SEQRES 18 B 366 ARG CYS PRO LYS PRO ALA SER GLN ILE GLY CYS SER ALA SEQRES 19 B 366 PRO GLY TYR LEU PRO THR SER LEU ALA TRP HIS PRO GLN SEQRES 20 B 366 GLN SER GLU VAL PHE VAL PHE GLY ASP GLU ASN GLY THR SEQRES 21 B 366 VAL SER LEU VAL ASP THR LYS SER THR SER CYS VAL LEU SEQRES 22 B 366 SER SER ALA VAL HIS SER GLN CYS VAL THR GLY LEU VAL SEQRES 23 B 366 PHE SER PRO HIS SER VAL PRO PHE LEU ALA SER LEU SER SEQRES 24 B 366 GLU ASP CYS SER LEU ALA VAL LEU ASP SER SER LEU SER SEQRES 25 B 366 GLU LEU PHE ARG SER GLN ALA HIS ARG ASP PHE VAL ARG SEQRES 26 B 366 ASP ALA THR TRP SER PRO LEU ASN HIS SER LEU LEU THR SEQRES 27 B 366 THR VAL GLY TRP ASP HIS GLN VAL VAL HIS HIS VAL VAL SEQRES 28 B 366 PRO THR GLU PRO LEU PRO ALA PRO GLY PRO ALA SER VAL SEQRES 29 B 366 THR GLU HET ADN A 701 19 HETNAM ADN ADENOSINE FORMUL 3 ADN C10 H13 N5 O4 FORMUL 4 HOH *214(H2 O) HELIX 1 AA1 GLU A 25 GLY A 37 1 13 HELIX 2 AA2 SER A 69 LEU A 73 5 5 HELIX 3 AA3 SER A 74 LEU A 81 1 8 HELIX 4 AA4 VAL A 96 LEU A 117 1 22 HELIX 5 AA5 ASN A 131 HIS A 143 1 13 HELIX 6 AA6 ALA A 159 LEU A 163 5 5 HELIX 7 AA7 SER A 180 GLU A 182 5 3 HELIX 8 AA8 GLU A 183 CYS A 196 1 14 HELIX 9 AA9 SER A 214 ARG A 220 1 7 HELIX 10 AB1 SER A 234 PHE A 236 5 3 HELIX 11 AB2 SER A 247 LEU A 260 1 14 HELIX 12 AB3 SER A 279 ASN A 290 1 12 HELIX 13 AB4 ASN A 295 LYS A 302 1 8 HELIX 14 AB5 GLU A 320 LYS A 329 1 10 HELIX 15 AB6 ASP A 330 ASP A 347 1 18 HELIX 16 AB7 PRO A 350 LYS A 354 5 5 HELIX 17 AB8 GLY A 369 ASP A 383 1 15 HELIX 18 AB9 ASN A 394 GLU A 408 1 15 HELIX 19 AC1 TRP A 409 SER A 411 5 3 HELIX 20 AC2 ALA A 441 GLU A 444 5 4 HELIX 21 AC3 LEU A 445 ALA A 453 1 9 HELIX 22 AC4 SER A 477 ALA A 486 1 10 HELIX 23 AC5 GLU A 495 GLU A 499 5 5 HELIX 24 AC6 ARG A 568 HIS A 572 5 5 HELIX 25 AC7 ASN A 627 ARG A 631 5 5 SHEET 1 AA1 9 SER A 16 ASP A 19 0 SHEET 2 AA1 9 PHE A 40 CYS A 42 1 O CYS A 42 N ARG A 18 SHEET 3 AA1 9 ILE A 82 LYS A 85 1 O VAL A 83 N LEU A 41 SHEET 4 AA1 9 ALA A 121 PRO A 125 1 O LEU A 123 N GLY A 84 SHEET 5 AA1 9 MET A 150 PRO A 156 1 O ARG A 154 N LEU A 124 SHEET 6 AA1 9 ILE A 202 GLU A 207 1 O ALA A 205 N MET A 153 SHEET 7 AA1 9 ILE A 226 PRO A 232 1 O ILE A 230 N LEU A 206 SHEET 8 AA1 9 GLN A 263 THR A 267 1 O ILE A 265 N ALA A 229 SHEET 9 AA1 9 SER A 16 ASP A 19 1 N ASP A 19 O ILE A 266 SHEET 1 AA2 2 LEU A 237 THR A 238 0 SHEET 2 AA2 2 PRO A 244 VAL A 245 -1 O VAL A 245 N LEU A 237 SHEET 1 AA3 5 VAL A 413 SER A 417 0 SHEET 2 AA3 5 ARG A 385 GLU A 392 1 N ALA A 390 O VAL A 416 SHEET 3 AA3 5 VAL A 358 LEU A 364 1 N GLN A 359 O ARG A 385 SHEET 4 AA3 5 ALA A 429 VAL A 433 1 O ILE A 431 N MET A 362 SHEET 5 AA3 5 LEU A 457 ILE A 464 1 O ILE A 464 N ILE A 432 SHEET 1 AA4 5 TYR A 502 VAL A 503 0 SHEET 2 AA4 5 ILE A 582 VAL A 592 -1 O LEU A 583 N TYR A 502 SHEET 3 AA4 5 THR A 546 TYR A 560 -1 N LEU A 548 O ILE A 590 SHEET 4 AA4 5 GLU A 467 SER A 476 -1 N THR A 469 O GLU A 556 SHEET 5 AA4 5 GLN A 516 SER A 522 -1 O CYS A 518 N SER A 470 SHEET 1 AA5 4 HIS A 510 GLN A 511 0 SHEET 2 AA5 4 GLU A 467 SER A 476 -1 N SER A 476 O HIS A 510 SHEET 3 AA5 4 THR A 546 TYR A 560 -1 O GLU A 556 N THR A 469 SHEET 4 AA5 4 ILE A 563 SER A 566 -1 O LEU A 565 N THR A 557 SHEET 1 AA6 4 ARG A 534 PRO A 541 0 SHEET 2 AA6 4 THR A 597 SER A 606 -1 O ILE A 598 N PHE A 540 SHEET 3 AA6 4 LYS A 610 ALA A 619 -1 O THR A 618 N CYS A 599 SHEET 4 AA6 4 ILE A 635 GLY A 636 -1 O ILE A 635 N VAL A 611 SHEET 1 AA7 4 GLN B 30 TYR B 36 0 SHEET 2 AA7 4 LEU B 42 SER B 47 -1 O SER B 47 N GLN B 30 SHEET 3 AA7 4 GLY B 56 PHE B 61 -1 O PHE B 61 N LEU B 42 SHEET 4 AA7 4 ALA B 75 THR B 79 -1 O ALA B 75 N LEU B 60 SHEET 1 AA8 4 VAL B 83 VAL B 89 0 SHEET 2 AA8 4 GLY B 93 SER B 98 -1 O ALA B 97 N ASP B 85 SHEET 3 AA8 4 ALA B 102 LEU B 108 -1 O GLU B 104 N VAL B 96 SHEET 4 AA8 4 ILE B 115 TYR B 122 -1 O LYS B 118 N LEU B 105 SHEET 1 AA9 4 VAL B 128 LEU B 134 0 SHEET 2 AA9 4 GLN B 139 SER B 144 -1 O GLN B 139 N LEU B 134 SHEET 3 AA9 4 ILE B 149 ASP B 153 -1 O TRP B 152 N ALA B 140 SHEET 4 AA9 4 VAL B 158 TYR B 163 -1 O TYR B 163 N ILE B 149 SHEET 1 AB1 4 VAL B 170 ALA B 175 0 SHEET 2 AB1 4 VAL B 182 SER B 187 -1 O LEU B 184 N ALA B 174 SHEET 3 AB1 4 ILE B 192 ASP B 196 -1 O TRP B 195 N PHE B 183 SHEET 4 AB1 4 GLN B 205 ILE B 206 -1 O ILE B 206 N ILE B 192 SHEET 1 AB2 4 PRO B 215 TRP B 220 0 SHEET 2 AB2 4 VAL B 227 ASP B 232 -1 O VAL B 229 N ALA B 219 SHEET 3 AB2 4 THR B 236 ASP B 241 -1 O VAL B 240 N PHE B 228 SHEET 4 AB2 4 LEU B 249 ALA B 252 -1 O LEU B 249 N LEU B 239 SHEET 1 AB3 4 GLY B 260 PHE B 263 0 SHEET 2 AB3 4 LEU B 271 LEU B 274 -1 O ALA B 272 N VAL B 262 SHEET 3 AB3 4 LEU B 280 LEU B 283 -1 O LEU B 283 N LEU B 271 SHEET 4 AB3 4 GLU B 289 SER B 293 -1 O LEU B 290 N VAL B 282 SHEET 1 AB4 3 VAL B 300 TRP B 305 0 SHEET 2 AB4 3 LEU B 312 GLY B 317 -1 O THR B 314 N THR B 304 SHEET 3 AB4 3 HIS B 324 VAL B 326 -1 O HIS B 325 N LEU B 313 CISPEP 1 GLU A 57 PRO A 58 0 3.86 CISPEP 2 ILE A 464 PRO A 465 0 9.47 CISPEP 3 HIS A 523 PRO A 524 0 2.51 CISPEP 4 ALA A 619 PRO A 620 0 3.58 CISPEP 5 ALA B 67 PRO B 68 0 5.72 SITE 1 AC1 15 PRO A 314 LEU A 315 TYR A 324 GLY A 365 SITE 2 AC1 15 GLU A 392 LYS A 393 SER A 418 ASP A 419 SITE 3 AC1 15 MET A 420 ARG A 421 GLU A 435 LEU A 436 SITE 4 AC1 15 CYS A 449 HOH A 812 HOH A 885 CRYST1 99.923 137.956 177.942 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010008 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007249 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005620 0.00000