HEADER VIRAL PROTEIN 24-MAY-21 7MZN TITLE SARS-COV-2 RECEPTOR BINDING DOMAIN BOUND TO FAB PDI 231 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPIKE PROTEIN S1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RECEPTOR BINDING DOMAIN (RBD); COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PDI 231 HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: PDI 231 LIGHT CHAIN; COMPND 12 CHAIN: L; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV, SARS-COV-2; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: S, 2; SOURCE 7 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 8 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 20 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SARS-COV-2, SPIKE, RBD, HUMAN ANTIBODY, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.PYMM,L.L.TAN,M.H.DIETRICH,L.J.CHAN,W.H.THAM REVDAT 4 18-OCT-23 7MZN 1 REMARK REVDAT 3 27-OCT-21 7MZN 1 JRNL REVDAT 2 20-OCT-21 7MZN 1 JRNL REVDAT 1 06-OCT-21 7MZN 0 JRNL AUTH A.K.WHEATLEY,P.PYMM,R.ESTERBAUER,M.H.DIETRICH,W.S.LEE, JRNL AUTH 2 D.DREW,H.G.KELLY,L.J.CHAN,F.L.MORDANT,K.A.BLACK,A.ADAIR, JRNL AUTH 3 H.X.TAN,J.A.JUNO,K.M.WRAGG,T.AMARASENA,E.LOPEZ,K.J.SELVA, JRNL AUTH 4 E.R.HAYCROFT,J.P.COONEY,H.VENUGOPAL,L.L.TAN,M.T.O NEILL, JRNL AUTH 5 C.C.ALLISON,D.CROMER,M.P.DAVENPORT,R.A.BOWEN,A.W.CHUNG, JRNL AUTH 6 M.PELLEGRINI,M.T.LIDDAMENT,A.GLUKHOVA,K.SUBBARAO,S.J.KENT, JRNL AUTH 7 W.H.THAM JRNL TITL LANDSCAPE OF HUMAN ANTIBODY RECOGNITION OF THE SARS-COV-2 JRNL TITL 2 RECEPTOR BINDING DOMAIN. JRNL REF CELL REP V. 37 09822 2021 JRNL REFN ESSN 2211-1247 JRNL PMID 34610292 JRNL DOI 10.1016/J.CELREP.2021.109822 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15_3459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 17687 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 893 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.9210 - 5.6314 1.00 2968 147 0.2041 0.2161 REMARK 3 2 5.6314 - 4.4708 1.00 2816 152 0.1845 0.2139 REMARK 3 3 4.4708 - 3.9059 1.00 2786 145 0.2021 0.2698 REMARK 3 4 3.9059 - 3.5489 1.00 2772 142 0.2462 0.2847 REMARK 3 5 3.5489 - 3.2946 1.00 2744 153 0.2847 0.3148 REMARK 3 6 3.2946 - 3.1004 0.99 2708 154 0.3238 0.3703 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 64.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7MZN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1000257076. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JAN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953732 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17774 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 48.921 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.27900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 1.24000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6W41 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG3350, 10% N,N REMARK 280 -DIMETHYLDODECYLAMINE N-OXIDE (LDAO), 0.2 M SODIUM SULPHATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.74100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.59950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.85550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 81.59950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.74100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.85550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 331 REMARK 465 ILE A 332 REMARK 465 THR A 333 REMARK 465 HIS A 531 REMARK 465 HIS A 532 REMARK 465 HIS A 533 REMARK 465 HIS A 534 REMARK 465 HIS A 535 REMARK 465 LYS H 227 REMARK 465 THR H 228 REMARK 465 HIS H 229 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 335 CG CD1 CD2 REMARK 470 TYR A 369 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASN A 370 CG OD1 ND2 REMARK 470 LYS A 386 CG CD CE NZ REMARK 470 ASN A 388 CG OD1 ND2 REMARK 470 ASP A 389 CG OD1 OD2 REMARK 470 LYS A 458 CG CD CE NZ REMARK 470 HIS A 530 CG ND1 CD2 CE1 NE2 REMARK 470 GLN H 13 CG CD OE1 NE2 REMARK 470 LYS H 43 CG CD CE NZ REMARK 470 LYS H 114 CG CD CE NZ REMARK 470 LYS H 126 CG CD CE NZ REMARK 470 LYS H 215 CG CD CE NZ REMARK 470 LYS H 223 CG CD CE NZ REMARK 470 LYS L 45 CG CD CE NZ REMARK 470 LYS L 126 CG CD CE NZ REMARK 470 LYS L 169 CG CD CE NZ REMARK 470 LYS L 190 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 343 35.55 -85.74 REMARK 500 ALA A 352 54.58 -111.51 REMARK 500 ASN A 360 66.30 60.41 REMARK 500 ASP A 389 49.02 -102.77 REMARK 500 ASN A 422 -56.03 -137.84 REMARK 500 ASP A 428 40.95 -100.00 REMARK 500 LEU A 441 -44.34 -131.47 REMARK 500 LYS A 458 -70.37 -61.75 REMARK 500 VAL H 48 -63.82 -109.64 REMARK 500 ASP H 153 71.33 59.56 REMARK 500 PRO H 156 -155.01 -89.87 REMARK 500 ARG L 30 -128.88 58.09 REMARK 500 ALA L 51 -42.14 68.24 REMARK 500 ALA L 84 -173.50 -172.11 REMARK 500 TYR L 91 -158.11 -114.84 REMARK 500 ASP L 92 -4.26 63.47 REMARK 500 ASN L 138 76.26 57.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7MZF RELATED DB: PDB REMARK 900 RELATED ID: 7MZG RELATED DB: PDB REMARK 900 RELATED ID: 7MZH RELATED DB: PDB REMARK 900 RELATED ID: 7MZI RELATED DB: PDB REMARK 900 RELATED ID: 7MZJ RELATED DB: PDB REMARK 900 RELATED ID: 7MZK RELATED DB: PDB REMARK 900 RELATED ID: 7MZL RELATED DB: PDB REMARK 900 RELATED ID: 7MZM RELATED DB: PDB DBREF 7MZN A 331 527 UNP P0DTC2 SPIKE_SARS2 331 527 DBREF 7MZN H 1 229 PDB 7MZN 7MZN 1 229 DBREF 7MZN L 1 214 PDB 7MZN 7MZN 1 214 SEQADV 7MZN GLY A 528 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZN SER A 529 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZN HIS A 530 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZN HIS A 531 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZN HIS A 532 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZN HIS A 533 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZN HIS A 534 UNP P0DTC2 EXPRESSION TAG SEQADV 7MZN HIS A 535 UNP P0DTC2 EXPRESSION TAG SEQRES 1 A 205 ASN ILE THR ASN LEU CYS PRO PHE GLY GLU VAL PHE ASN SEQRES 2 A 205 ALA THR ARG PHE ALA SER VAL TYR ALA TRP ASN ARG LYS SEQRES 3 A 205 ARG ILE SER ASN CYS VAL ALA ASP TYR SER VAL LEU TYR SEQRES 4 A 205 ASN SER ALA SER PHE SER THR PHE LYS CYS TYR GLY VAL SEQRES 5 A 205 SER PRO THR LYS LEU ASN ASP LEU CYS PHE THR ASN VAL SEQRES 6 A 205 TYR ALA ASP SER PHE VAL ILE ARG GLY ASP GLU VAL ARG SEQRES 7 A 205 GLN ILE ALA PRO GLY GLN THR GLY LYS ILE ALA ASP TYR SEQRES 8 A 205 ASN TYR LYS LEU PRO ASP ASP PHE THR GLY CYS VAL ILE SEQRES 9 A 205 ALA TRP ASN SER ASN ASN LEU ASP SER LYS VAL GLY GLY SEQRES 10 A 205 ASN TYR ASN TYR LEU TYR ARG LEU PHE ARG LYS SER ASN SEQRES 11 A 205 LEU LYS PRO PHE GLU ARG ASP ILE SER THR GLU ILE TYR SEQRES 12 A 205 GLN ALA GLY SER THR PRO CYS ASN GLY VAL GLU GLY PHE SEQRES 13 A 205 ASN CYS TYR PHE PRO LEU GLN SER TYR GLY PHE GLN PRO SEQRES 14 A 205 THR ASN GLY VAL GLY TYR GLN PRO TYR ARG VAL VAL VAL SEQRES 15 A 205 LEU SER PHE GLU LEU LEU HIS ALA PRO ALA THR VAL CYS SEQRES 16 A 205 GLY PRO GLY SER HIS HIS HIS HIS HIS HIS SEQRES 1 H 229 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU ILE GLN SEQRES 2 H 229 PRO GLY GLY SER LEU ARG LEU SER CYS VAL ALA SER GLY SEQRES 3 H 229 LEU THR VAL SER SER ASN TYR MET ASN TRP VAL ARG GLN SEQRES 4 H 229 THR PRO GLY LYS GLY LEU GLU TRP VAL SER VAL ILE TYR SEQRES 5 H 229 SER GLY GLY SER THR PHE TYR ALA ASP SER VAL LYS GLY SEQRES 6 H 229 ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR LEU SEQRES 7 H 229 PHE LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA SEQRES 8 H 229 VAL TYR TYR CYS ALA ARG VAL GLY GLY TYR CYS SER SER SEQRES 9 H 229 ALA ASN CYS VAL SER ASP VAL TRP GLY LYS GLY THR THR SEQRES 10 H 229 VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL SEQRES 11 H 229 PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY SEQRES 12 H 229 THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO SEQRES 13 H 229 GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SEQRES 14 H 229 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER SEQRES 15 H 229 GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SEQRES 16 H 229 SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN SEQRES 17 H 229 HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU SEQRES 18 H 229 PRO LYS SER CYS ASP LYS THR HIS SEQRES 1 L 214 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS GLN ALA SER SEQRES 3 L 214 GLN ASP ILE ARG ASN TYR LEU ASN TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY LYS ALA PRO LYS ILE MET ILE TYR ASP ALA SER SEQRES 5 L 214 ILE LEU GLU THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP PHE THR PHE THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO GLU ASP ILE ALA THR TYR TYR CYS GLN GLN TYR SEQRES 8 L 214 ASP ASN LEU PRO ILE THR PHE GLY GLN GLY THR GLN LEU SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS HET NAG B 1 14 HET NAG B 2 14 HET FUC B 3 10 HET SO4 A 601 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 4 NAG 2(C8 H15 N O6) FORMUL 4 FUC C6 H12 O5 FORMUL 5 SO4 O4 S 2- HELIX 1 AA1 PRO A 337 ASN A 343 1 7 HELIX 2 AA2 TYR A 365 SER A 371 1 7 HELIX 3 AA3 THR A 385 ASP A 389 5 5 HELIX 4 AA4 GLU A 406 ILE A 410 5 5 HELIX 5 AA5 GLY A 416 ASN A 422 1 7 HELIX 6 AA6 SER A 438 SER A 443 1 6 HELIX 7 AA7 GLY A 502 TYR A 505 5 4 HELIX 8 AA8 THR H 28 ASN H 32 5 5 HELIX 9 AA9 ARG H 86 THR H 90 5 5 HELIX 10 AB1 SER H 136 LYS H 138 5 3 HELIX 11 AB2 SER H 196 GLN H 201 1 6 HELIX 12 AB3 LYS H 210 ASN H 213 5 4 HELIX 13 AB4 GLN L 79 ILE L 83 5 5 HELIX 14 AB5 SER L 121 LYS L 126 1 6 HELIX 15 AB6 LYS L 183 LYS L 188 1 6 SHEET 1 AA1 5 ASN A 354 ILE A 358 0 SHEET 2 AA1 5 ASN A 394 ARG A 403 -1 O VAL A 395 N ILE A 358 SHEET 3 AA1 5 PRO A 507 GLU A 516 -1 O VAL A 510 N PHE A 400 SHEET 4 AA1 5 GLY A 431 ASN A 437 -1 N ILE A 434 O VAL A 511 SHEET 5 AA1 5 THR A 376 TYR A 380 -1 N LYS A 378 O VAL A 433 SHEET 1 AA2 3 CYS A 361 VAL A 362 0 SHEET 2 AA2 3 VAL A 524 CYS A 525 1 O CYS A 525 N CYS A 361 SHEET 3 AA2 3 CYS A 391 PHE A 392 -1 N PHE A 392 O VAL A 524 SHEET 1 AA3 2 LEU A 452 ARG A 454 0 SHEET 2 AA3 2 LEU A 492 SER A 494 -1 O GLN A 493 N TYR A 453 SHEET 1 AA4 2 TYR A 473 GLN A 474 0 SHEET 2 AA4 2 CYS A 488 TYR A 489 -1 O TYR A 489 N TYR A 473 SHEET 1 AA5 4 GLN H 3 SER H 7 0 SHEET 2 AA5 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA5 4 THR H 77 MET H 82 -1 O LEU H 78 N CYS H 22 SHEET 4 AA5 4 PHE H 67 ASP H 72 -1 N THR H 68 O GLN H 81 SHEET 1 AA6 6 LEU H 11 ILE H 12 0 SHEET 2 AA6 6 THR H 116 VAL H 120 1 O THR H 119 N ILE H 12 SHEET 3 AA6 6 ALA H 91 ARG H 97 -1 N ALA H 91 O VAL H 118 SHEET 4 AA6 6 MET H 34 THR H 40 -1 N ASN H 35 O ALA H 96 SHEET 5 AA6 6 GLY H 44 ILE H 51 -1 O SER H 49 N TRP H 36 SHEET 6 AA6 6 THR H 57 TYR H 59 -1 O PHE H 58 N VAL H 50 SHEET 1 AA7 4 LEU H 11 ILE H 12 0 SHEET 2 AA7 4 THR H 116 VAL H 120 1 O THR H 119 N ILE H 12 SHEET 3 AA7 4 ALA H 91 ARG H 97 -1 N ALA H 91 O VAL H 118 SHEET 4 AA7 4 VAL H 111 TRP H 112 -1 O VAL H 111 N ARG H 97 SHEET 1 AA8 4 SER H 129 LEU H 133 0 SHEET 2 AA8 4 THR H 144 TYR H 154 -1 O LEU H 150 N PHE H 131 SHEET 3 AA8 4 TYR H 185 PRO H 194 -1 O VAL H 193 N ALA H 145 SHEET 4 AA8 4 VAL H 172 THR H 174 -1 N HIS H 173 O VAL H 190 SHEET 1 AA9 4 THR H 140 SER H 141 0 SHEET 2 AA9 4 THR H 144 TYR H 154 -1 O THR H 144 N SER H 141 SHEET 3 AA9 4 TYR H 185 PRO H 194 -1 O VAL H 193 N ALA H 145 SHEET 4 AA9 4 VAL H 178 LEU H 179 -1 N VAL H 178 O SER H 186 SHEET 1 AB1 3 THR H 160 TRP H 163 0 SHEET 2 AB1 3 ILE H 204 HIS H 209 -1 O ASN H 206 N SER H 162 SHEET 3 AB1 3 THR H 214 LYS H 219 -1 O THR H 214 N HIS H 209 SHEET 1 AB2 4 MET L 4 SER L 7 0 SHEET 2 AB2 4 VAL L 19 ALA L 25 -1 O GLN L 24 N THR L 5 SHEET 3 AB2 4 ASP L 70 ILE L 75 -1 O PHE L 73 N ILE L 21 SHEET 4 AB2 4 PHE L 62 SER L 67 -1 N SER L 65 O THR L 72 SHEET 1 AB3 6 SER L 10 ALA L 13 0 SHEET 2 AB3 6 THR L 102 ILE L 106 1 O GLU L 105 N ALA L 13 SHEET 3 AB3 6 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB3 6 LEU L 33 GLN L 38 -1 N ASN L 34 O GLN L 89 SHEET 5 AB3 6 PRO L 44 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 AB3 6 ILE L 53 LEU L 54 -1 O ILE L 53 N TYR L 49 SHEET 1 AB4 4 SER L 10 ALA L 13 0 SHEET 2 AB4 4 THR L 102 ILE L 106 1 O GLU L 105 N ALA L 13 SHEET 3 AB4 4 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB4 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AB5 4 SER L 114 PHE L 118 0 SHEET 2 AB5 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB5 4 TYR L 173 SER L 182 -1 O LEU L 175 N LEU L 136 SHEET 4 AB5 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB6 4 LEU L 154 GLN L 155 0 SHEET 2 AB6 4 LYS L 145 VAL L 150 -1 N TRP L 148 O GLN L 155 SHEET 3 AB6 4 VAL L 191 THR L 197 -1 O THR L 197 N LYS L 145 SHEET 4 AB6 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS A 336 CYS A 361 1555 1555 2.03 SSBOND 2 CYS A 379 CYS A 432 1555 1555 2.03 SSBOND 3 CYS A 391 CYS A 525 1555 1555 2.03 SSBOND 4 CYS A 480 CYS A 488 1555 1555 2.03 SSBOND 5 CYS H 22 CYS H 95 1555 1555 2.03 SSBOND 6 CYS H 102 CYS H 107 1555 1555 2.03 SSBOND 7 CYS H 149 CYS H 205 1555 1555 2.03 SSBOND 8 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 9 CYS L 134 CYS L 194 1555 1555 2.03 LINK ND2 ASN A 343 C1 NAG B 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.38 LINK O6 NAG B 1 C1 FUC B 3 1555 1555 1.37 CISPEP 1 PHE H 155 PRO H 156 0 -3.60 CISPEP 2 GLU H 157 PRO H 158 0 0.17 CISPEP 3 SER L 7 PRO L 8 0 -4.09 CISPEP 4 LEU L 94 PRO L 95 0 -1.03 CISPEP 5 TYR L 140 PRO L 141 0 1.67 CRYST1 55.482 103.711 163.199 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018024 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009642 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006127 0.00000