HEADER TRANSFERASE 24-MAY-21 7MZY TITLE ANAPLASTIC LYMPHOMA KINASE (ALK) EXTRACELLULAR FRAGMENT OF LIGAND TITLE 2 BINDING REGION 673-986 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALK TYROSINE KINASE RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LIGAND BINDING REGION, RESIDUES 673-986; COMPND 5 SYNONYM: ANAPLASTIC LYMPHOMA KINASE; COMPND 6 EC: 2.7.10.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ALK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS ANAPLASTIC LYMPHOMA KINASE, RECEPTOR TYROSINE KINASES, RTK, FAM150, KEYWDS 2 LTK, DE NOVO PROTEIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.V.RESHETNYAK,M.SOWAILEH,D.J.MILLER,P.ROSSI,A.G.MYASNIKOV, AUTHOR 2 C.G.KALODIMOS REVDAT 3 15-DEC-21 7MZY 1 JRNL REVDAT 2 08-DEC-21 7MZY 1 JRNL REVDAT 1 24-NOV-21 7MZY 0 JRNL AUTH A.V.RESHETNYAK,P.ROSSI,A.G.MYASNIKOV,M.SOWAILEH,J.MOHANTY, JRNL AUTH 2 A.NOURSE,D.J.MILLER,I.LAX,J.SCHLESSINGER,C.G.KALODIMOS JRNL TITL MECHANISM FOR THE ACTIVATION OF THE ANAPLASTIC LYMPHOMA JRNL TITL 2 KINASE RECEPTOR. JRNL REF NATURE V. 600 153 2021 JRNL REFN ESSN 1476-4687 JRNL PMID 34819673 JRNL DOI 10.1038/S41586-021-04140-8 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 80.3 REMARK 3 NUMBER OF REFLECTIONS : 77123 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.760 REMARK 3 FREE R VALUE TEST SET COUNT : 5211 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.5700 - 4.6500 0.94 3045 219 0.1924 0.2181 REMARK 3 2 4.6500 - 3.6900 0.99 3040 220 0.1406 0.1592 REMARK 3 3 3.6900 - 3.2200 1.00 3034 221 0.1534 0.1672 REMARK 3 4 3.2200 - 2.9300 1.00 3033 221 0.1576 0.1788 REMARK 3 5 2.9300 - 2.7200 0.99 2985 216 0.1634 0.2332 REMARK 3 6 2.7200 - 2.5600 0.95 2874 202 0.1669 0.1821 REMARK 3 7 2.5600 - 2.4300 0.92 2748 197 0.1593 0.2058 REMARK 3 8 2.4300 - 2.3200 0.98 2948 214 0.1664 0.1867 REMARK 3 9 2.3200 - 2.2300 0.98 2905 209 0.1601 0.1867 REMARK 3 10 2.2300 - 2.1600 0.98 2919 214 0.1585 0.1994 REMARK 3 11 2.1600 - 2.0900 0.98 2934 213 0.1635 0.1986 REMARK 3 12 2.0900 - 2.0300 0.98 2904 212 0.1574 0.1929 REMARK 3 13 2.0300 - 1.9800 0.97 2898 206 0.1657 0.1943 REMARK 3 14 1.9800 - 1.9300 0.96 2854 207 0.1796 0.1989 REMARK 3 15 1.9300 - 1.8800 0.94 2776 203 0.1808 0.2025 REMARK 3 16 1.8800 - 1.8400 0.91 2689 200 0.1759 0.1959 REMARK 3 17 1.8400 - 1.8100 0.82 2452 176 0.1745 0.2173 REMARK 3 18 1.8100 - 1.7700 0.76 2256 163 0.1805 0.1976 REMARK 3 19 1.7700 - 1.7400 0.77 2270 161 0.1827 0.1932 REMARK 3 20 1.7400 - 1.7100 0.73 2129 155 0.1753 0.2246 REMARK 3 21 1.7100 - 1.6800 0.71 2104 153 0.1789 0.2493 REMARK 3 22 1.6800 - 1.6600 0.68 2011 152 0.1846 0.2441 REMARK 3 23 1.6600 - 1.6300 0.64 1894 138 0.1875 0.1842 REMARK 3 24 1.6300 - 1.6100 0.62 1840 128 0.1906 0.2262 REMARK 3 25 1.6100 - 1.5900 0.57 1698 128 0.1973 0.2441 REMARK 3 26 1.5900 - 1.5700 0.55 1590 112 0.2073 0.2666 REMARK 3 27 1.5700 - 1.5500 0.50 1508 103 0.2211 0.2237 REMARK 3 28 1.5500 - 1.5300 0.47 1397 101 0.2455 0.3152 REMARK 3 29 1.5300 - 1.5100 0.42 1236 95 0.2775 0.3212 REMARK 3 30 1.5100 - 1.5000 0.32 941 72 0.2962 0.3083 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.145 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.971 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 4520 REMARK 3 ANGLE : 1.154 6126 REMARK 3 CHIRALITY : 0.106 624 REMARK 3 PLANARITY : 0.008 832 REMARK 3 DIHEDRAL : 6.483 657 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 677 THROUGH 704 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.7367 33.6423 52.7392 REMARK 3 T TENSOR REMARK 3 T11: 0.1459 T22: -0.0141 REMARK 3 T33: 0.1331 T12: 0.0344 REMARK 3 T13: -0.1235 T23: 0.1241 REMARK 3 L TENSOR REMARK 3 L11: 0.0124 L22: 0.0213 REMARK 3 L33: 0.0271 L12: -0.0077 REMARK 3 L13: 0.0190 L23: -0.0201 REMARK 3 S TENSOR REMARK 3 S11: 0.0229 S12: -0.0259 S13: -0.0537 REMARK 3 S21: 0.0551 S22: 0.0306 S23: -0.0324 REMARK 3 S31: 0.0734 S32: 0.0281 S33: 0.0505 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 705 THROUGH 731 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9935 36.3147 59.8485 REMARK 3 T TENSOR REMARK 3 T11: 0.2904 T22: 0.0856 REMARK 3 T33: 0.1544 T12: 0.0291 REMARK 3 T13: -0.1141 T23: 0.1179 REMARK 3 L TENSOR REMARK 3 L11: 0.0043 L22: 0.0275 REMARK 3 L33: 0.0092 L12: -0.0003 REMARK 3 L13: 0.0050 L23: -0.0083 REMARK 3 S TENSOR REMARK 3 S11: 0.0268 S12: -0.0178 S13: -0.0425 REMARK 3 S21: 0.0373 S22: 0.0059 S23: -0.0287 REMARK 3 S31: 0.0314 S32: 0.0118 S33: 0.0171 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 732 THROUGH 787 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9906 43.8977 47.7570 REMARK 3 T TENSOR REMARK 3 T11: 0.1287 T22: 0.0800 REMARK 3 T33: 0.1250 T12: 0.0164 REMARK 3 T13: -0.0630 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.0329 L22: 0.0233 REMARK 3 L33: 0.0114 L12: -0.0037 REMARK 3 L13: -0.0103 L23: -0.0070 REMARK 3 S TENSOR REMARK 3 S11: 0.0157 S12: 0.0049 S13: -0.0817 REMARK 3 S21: 0.0835 S22: -0.0252 S23: -0.1483 REMARK 3 S31: 0.0362 S32: 0.0390 S33: -0.0108 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 788 THROUGH 817 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1564 54.5094 21.4267 REMARK 3 T TENSOR REMARK 3 T11: 0.1606 T22: 0.1180 REMARK 3 T33: 0.0543 T12: 0.0365 REMARK 3 T13: -0.0087 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 0.0010 L22: 0.0026 REMARK 3 L33: 0.0021 L12: -0.0013 REMARK 3 L13: 0.0005 L23: -0.0013 REMARK 3 S TENSOR REMARK 3 S11: 0.0212 S12: 0.0524 S13: -0.0071 REMARK 3 S21: -0.0444 S22: 0.0012 S23: -0.0099 REMARK 3 S31: -0.0026 S32: 0.0222 S33: 0.0006 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 818 THROUGH 833 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.2139 49.2876 55.7363 REMARK 3 T TENSOR REMARK 3 T11: 0.1034 T22: 0.0511 REMARK 3 T33: 0.0536 T12: 0.0179 REMARK 3 T13: -0.0760 T23: 0.0325 REMARK 3 L TENSOR REMARK 3 L11: 0.0196 L22: 0.0016 REMARK 3 L33: 0.0203 L12: -0.0039 REMARK 3 L13: 0.0029 L23: 0.0011 REMARK 3 S TENSOR REMARK 3 S11: 0.0139 S12: 0.0216 S13: 0.0058 REMARK 3 S21: 0.0350 S22: 0.0133 S23: -0.0250 REMARK 3 S31: 0.0056 S32: -0.0121 S33: 0.0115 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 834 THROUGH 963 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7612 55.7534 43.2033 REMARK 3 T TENSOR REMARK 3 T11: 0.0579 T22: 0.0754 REMARK 3 T33: 0.0721 T12: 0.0013 REMARK 3 T13: -0.0172 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 0.0022 L22: 0.1048 REMARK 3 L33: 0.0046 L12: -0.0167 REMARK 3 L13: 0.0070 L23: 0.0336 REMARK 3 S TENSOR REMARK 3 S11: 0.0236 S12: 0.0317 S13: -0.0011 REMARK 3 S21: 0.0174 S22: 0.0123 S23: -0.1310 REMARK 3 S31: -0.0134 S32: 0.0080 S33: 0.0066 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 964 THROUGH 985 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.0550 41.7453 50.4418 REMARK 3 T TENSOR REMARK 3 T11: 0.1720 T22: 0.1409 REMARK 3 T33: 0.2366 T12: 0.0453 REMARK 3 T13: -0.1230 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 0.0101 L22: 0.0029 REMARK 3 L33: 0.0001 L12: 0.0057 REMARK 3 L13: 0.0020 L23: 0.0006 REMARK 3 S TENSOR REMARK 3 S11: -0.0059 S12: -0.0153 S13: -0.0093 REMARK 3 S21: 0.0260 S22: 0.0133 S23: -0.0354 REMARK 3 S31: 0.0152 S32: 0.0377 S33: 0.0162 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 680 THROUGH 717 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.6382 37.4499 38.9917 REMARK 3 T TENSOR REMARK 3 T11: 0.0844 T22: 0.0498 REMARK 3 T33: 0.2741 T12: -0.0329 REMARK 3 T13: -0.0494 T23: -0.0683 REMARK 3 L TENSOR REMARK 3 L11: 0.0004 L22: 0.0018 REMARK 3 L33: 0.0014 L12: 0.0004 REMARK 3 L13: 0.0025 L23: 0.0021 REMARK 3 S TENSOR REMARK 3 S11: 0.0031 S12: 0.0278 S13: -0.0700 REMARK 3 S21: -0.0252 S22: 0.0164 S23: -0.0212 REMARK 3 S31: 0.0508 S32: -0.0167 S33: 0.0105 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 718 THROUGH 765 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.4503 48.7898 41.7896 REMARK 3 T TENSOR REMARK 3 T11: 0.0759 T22: 0.1143 REMARK 3 T33: 0.0830 T12: -0.0145 REMARK 3 T13: 0.0004 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 0.0347 L22: 0.0454 REMARK 3 L33: 0.0012 L12: 0.0100 REMARK 3 L13: -0.0034 L23: 0.0060 REMARK 3 S TENSOR REMARK 3 S11: 0.0321 S12: -0.0170 S13: -0.1513 REMARK 3 S21: -0.0245 S22: -0.0455 S23: -0.0167 REMARK 3 S31: -0.0257 S32: -0.0507 S33: -0.0129 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 766 THROUGH 787 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.4821 45.7251 42.9030 REMARK 3 T TENSOR REMARK 3 T11: 0.1013 T22: 0.0823 REMARK 3 T33: 0.0844 T12: -0.0146 REMARK 3 T13: 0.0003 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 0.0130 L22: 0.0258 REMARK 3 L33: 0.0293 L12: 0.0170 REMARK 3 L13: -0.0022 L23: -0.0001 REMARK 3 S TENSOR REMARK 3 S11: 0.0139 S12: 0.0107 S13: -0.1232 REMARK 3 S21: 0.0068 S22: -0.0682 S23: -0.0276 REMARK 3 S31: 0.0084 S32: 0.0044 S33: -0.0485 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 788 THROUGH 851 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.4757 55.3891 57.2834 REMARK 3 T TENSOR REMARK 3 T11: 0.1289 T22: 0.1086 REMARK 3 T33: 0.0198 T12: -0.0513 REMARK 3 T13: -0.0110 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.0321 L22: 0.0299 REMARK 3 L33: 0.0252 L12: -0.0083 REMARK 3 L13: -0.0095 L23: 0.0192 REMARK 3 S TENSOR REMARK 3 S11: 0.0071 S12: -0.0393 S13: -0.0867 REMARK 3 S21: 0.0777 S22: -0.0291 S23: -0.0054 REMARK 3 S31: -0.0198 S32: -0.0381 S33: -0.0274 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 857 THROUGH 876 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.2126 64.8273 43.0115 REMARK 3 T TENSOR REMARK 3 T11: 0.0785 T22: 0.0829 REMARK 3 T33: 0.0993 T12: -0.0003 REMARK 3 T13: -0.0074 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.0008 L22: 0.0053 REMARK 3 L33: 0.0033 L12: 0.0012 REMARK 3 L13: 0.0027 L23: -0.0019 REMARK 3 S TENSOR REMARK 3 S11: 0.0273 S12: -0.0021 S13: 0.0233 REMARK 3 S21: -0.0068 S22: -0.0009 S23: 0.0169 REMARK 3 S31: -0.0104 S32: -0.0035 S33: 0.0058 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 877 THROUGH 963 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.2701 57.6651 49.6267 REMARK 3 T TENSOR REMARK 3 T11: 0.0627 T22: 0.0739 REMARK 3 T33: 0.0729 T12: -0.0126 REMARK 3 T13: -0.0062 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 0.0220 L22: 0.0447 REMARK 3 L33: 0.0134 L12: 0.0195 REMARK 3 L13: -0.0076 L23: -0.0099 REMARK 3 S TENSOR REMARK 3 S11: 0.0262 S12: -0.0080 S13: -0.0160 REMARK 3 S21: 0.0283 S22: -0.0152 S23: 0.0017 REMARK 3 S31: -0.0082 S32: -0.0048 S33: -0.0076 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 964 THROUGH 986 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.4494 49.7265 41.6606 REMARK 3 T TENSOR REMARK 3 T11: 0.0929 T22: 0.1286 REMARK 3 T33: 0.1187 T12: -0.0090 REMARK 3 T13: -0.0129 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 0.0026 L22: 0.0037 REMARK 3 L33: 0.0000 L12: 0.0007 REMARK 3 L13: 0.0011 L23: -0.0015 REMARK 3 S TENSOR REMARK 3 S11: 0.0227 S12: 0.0057 S13: -0.0525 REMARK 3 S21: 0.0201 S22: -0.0085 S23: 0.0248 REMARK 3 S31: 0.0013 S32: -0.0449 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7MZY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1000256590. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-19; 08-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 22-ID; 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0, 0.97911, 0.97166; 1.0 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL; PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M; DECTRIS REMARK 200 PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 95109 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.3 REMARK 200 DATA REDUNDANCY : 11.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 61.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25.5 % PEG 4000, 15% GLYCEROL, 0.17 M REMARK 280 AMMONIUM ACETATE AND 0.085M SODIUM CITRATE PH 5.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 35.14450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 66.67800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.14450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 66.67800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 672 REMARK 465 GLN A 673 REMARK 465 THR A 674 REMARK 465 PRO A 675 REMARK 465 ILE A 676 REMARK 465 ASN A 749 REMARK 465 THR A 750 REMARK 465 ASN A 986 REMARK 465 GLY B 672 REMARK 465 GLN B 673 REMARK 465 THR B 674 REMARK 465 PRO B 675 REMARK 465 ILE B 676 REMARK 465 PHE B 677 REMARK 465 ASP B 678 REMARK 465 PRO B 679 REMARK 465 LYS B 852 REMARK 465 THR B 853 REMARK 465 ASP B 854 REMARK 465 THR B 855 REMARK 465 PHE B 856 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 809 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 852 CG CD CE NZ REMARK 470 MET A 973 CG SD CE REMARK 470 THR B 750 OG1 CG2 REMARK 470 GLU B 797 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 813 CB CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 803 NH2 ARG B 806 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1261 O HOH B 1208 4456 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 813 -60.15 -91.68 REMARK 500 TRP A 814 55.99 -90.68 REMARK 500 TRP A 814 55.99 -90.20 REMARK 500 TRP A 913 15.77 -158.30 REMARK 500 CYS A 928 -122.16 -120.57 REMARK 500 ASN A 946 56.94 -93.06 REMARK 500 PRO A 968 -178.66 -67.35 REMARK 500 ASP B 768 -2.89 74.17 REMARK 500 TRP B 814 54.62 -90.87 REMARK 500 TRP B 913 17.49 -152.16 REMARK 500 CYS B 928 -122.53 -122.70 REMARK 500 VAL B 972 -25.42 -146.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7N00 RELATED DB: PDB REMARK 900 CRYO EM STRUCTURE OF ALK LIGAND BINDING FRAGMENT IN COMPLEX WITH REMARK 900 AUGALPHA REMARK 900 RELATED ID: 7MZW RELATED DB: PDB REMARK 900 NMR STRUCTURE OF ALK LIGAND BINDING FRAGMENT REMARK 900 RELATED ID: 7MZX RELATED DB: PDB REMARK 900 NMR STRUCTURE OF AUGALPHA 77-152 REMARK 900 RELATED ID: 7MZZ RELATED DB: PDB REMARK 900 NMR STRUCTURE OF AUGBETA 60-129 DBREF 7MZY A 673 986 UNP Q9UM73 ALK_HUMAN 673 986 DBREF 7MZY B 673 986 UNP Q9UM73 ALK_HUMAN 673 986 SEQADV 7MZY GLY A 672 UNP Q9UM73 EXPRESSION TAG SEQADV 7MZY GLY B 672 UNP Q9UM73 EXPRESSION TAG SEQRES 1 A 315 GLY GLN THR PRO ILE PHE ASP PRO THR VAL HIS TRP LEU SEQRES 2 A 315 PHE THR THR CYS GLY ALA SER GLY PRO HIS GLY PRO THR SEQRES 3 A 315 GLN ALA GLN CYS ASN ASN ALA TYR GLN ASN SER ASN LEU SEQRES 4 A 315 SER VAL GLU VAL GLY SER GLU GLY PRO LEU LYS GLY ILE SEQRES 5 A 315 GLN ILE TRP LYS VAL PRO ALA THR ASP THR TYR SER ILE SEQRES 6 A 315 SER GLY TYR GLY ALA ALA GLY GLY LYS GLY GLY LYS ASN SEQRES 7 A 315 THR MET MET ARG SER HIS GLY VAL SER VAL LEU GLY ILE SEQRES 8 A 315 PHE ASN LEU GLU LYS ASP ASP MET LEU TYR ILE LEU VAL SEQRES 9 A 315 GLY GLN GLN GLY GLU ASP ALA CYS PRO SER THR ASN GLN SEQRES 10 A 315 LEU ILE GLN LYS VAL CYS ILE GLY GLU ASN ASN VAL ILE SEQRES 11 A 315 GLU GLU GLU ILE ARG VAL ASN ARG SER VAL HIS GLU TRP SEQRES 12 A 315 ALA GLY GLY GLY GLY GLY GLY GLY GLY ALA THR TYR VAL SEQRES 13 A 315 PHE LYS MET LYS ASP GLY VAL PRO VAL PRO LEU ILE ILE SEQRES 14 A 315 ALA ALA GLY GLY GLY GLY ARG ALA TYR GLY ALA LYS THR SEQRES 15 A 315 ASP THR PHE HIS PRO GLU ARG LEU GLU ASN ASN SER SER SEQRES 16 A 315 VAL LEU GLY LEU ASN GLY ASN SER GLY ALA ALA GLY GLY SEQRES 17 A 315 GLY GLY GLY TRP ASN ASP ASN THR SER LEU LEU TRP ALA SEQRES 18 A 315 GLY LYS SER LEU GLN GLU GLY ALA THR GLY GLY HIS SER SEQRES 19 A 315 CYS PRO GLN ALA MET LYS LYS TRP GLY TRP GLU THR ARG SEQRES 20 A 315 GLY GLY PHE GLY GLY GLY GLY GLY GLY CYS SER SER GLY SEQRES 21 A 315 GLY GLY GLY GLY GLY TYR ILE GLY GLY ASN ALA ALA SER SEQRES 22 A 315 ASN ASN ASP PRO GLU MET ASP GLY GLU ASP GLY VAL SER SEQRES 23 A 315 PHE ILE SER PRO LEU GLY ILE LEU TYR THR PRO ALA LEU SEQRES 24 A 315 LYS VAL MET GLU GLY HIS GLY GLU VAL ASN ILE LYS HIS SEQRES 25 A 315 TYR LEU ASN SEQRES 1 B 315 GLY GLN THR PRO ILE PHE ASP PRO THR VAL HIS TRP LEU SEQRES 2 B 315 PHE THR THR CYS GLY ALA SER GLY PRO HIS GLY PRO THR SEQRES 3 B 315 GLN ALA GLN CYS ASN ASN ALA TYR GLN ASN SER ASN LEU SEQRES 4 B 315 SER VAL GLU VAL GLY SER GLU GLY PRO LEU LYS GLY ILE SEQRES 5 B 315 GLN ILE TRP LYS VAL PRO ALA THR ASP THR TYR SER ILE SEQRES 6 B 315 SER GLY TYR GLY ALA ALA GLY GLY LYS GLY GLY LYS ASN SEQRES 7 B 315 THR MET MET ARG SER HIS GLY VAL SER VAL LEU GLY ILE SEQRES 8 B 315 PHE ASN LEU GLU LYS ASP ASP MET LEU TYR ILE LEU VAL SEQRES 9 B 315 GLY GLN GLN GLY GLU ASP ALA CYS PRO SER THR ASN GLN SEQRES 10 B 315 LEU ILE GLN LYS VAL CYS ILE GLY GLU ASN ASN VAL ILE SEQRES 11 B 315 GLU GLU GLU ILE ARG VAL ASN ARG SER VAL HIS GLU TRP SEQRES 12 B 315 ALA GLY GLY GLY GLY GLY GLY GLY GLY ALA THR TYR VAL SEQRES 13 B 315 PHE LYS MET LYS ASP GLY VAL PRO VAL PRO LEU ILE ILE SEQRES 14 B 315 ALA ALA GLY GLY GLY GLY ARG ALA TYR GLY ALA LYS THR SEQRES 15 B 315 ASP THR PHE HIS PRO GLU ARG LEU GLU ASN ASN SER SER SEQRES 16 B 315 VAL LEU GLY LEU ASN GLY ASN SER GLY ALA ALA GLY GLY SEQRES 17 B 315 GLY GLY GLY TRP ASN ASP ASN THR SER LEU LEU TRP ALA SEQRES 18 B 315 GLY LYS SER LEU GLN GLU GLY ALA THR GLY GLY HIS SER SEQRES 19 B 315 CYS PRO GLN ALA MET LYS LYS TRP GLY TRP GLU THR ARG SEQRES 20 B 315 GLY GLY PHE GLY GLY GLY GLY GLY GLY CYS SER SER GLY SEQRES 21 B 315 GLY GLY GLY GLY GLY TYR ILE GLY GLY ASN ALA ALA SER SEQRES 22 B 315 ASN ASN ASP PRO GLU MET ASP GLY GLU ASP GLY VAL SER SEQRES 23 B 315 PHE ILE SER PRO LEU GLY ILE LEU TYR THR PRO ALA LEU SEQRES 24 B 315 LYS VAL MET GLU GLY HIS GLY GLU VAL ASN ILE LYS HIS SEQRES 25 B 315 TYR LEU ASN HET ACT A1001 4 HET ACT A1002 4 HETNAM ACT ACETATE ION FORMUL 3 ACT 2(C2 H3 O2 1-) FORMUL 5 HOH *452(H2 O) HELIX 1 AA1 THR A 697 TYR A 705 1 9 HELIX 2 AA2 GLU A 717 LYS A 721 5 5 HELIX 3 AA3 ASN A 787 ILE A 795 1 9 HELIX 4 AA4 ASN A 799 ASN A 808 1 10 HELIX 5 AA5 SER A 895 GLY A 899 5 5 HELIX 6 AA6 CYS A 906 GLY A 914 1 9 HELIX 7 AA7 THR B 697 TYR B 705 1 9 HELIX 8 AA8 GLU B 717 LYS B 721 5 5 HELIX 9 AA9 ASN B 787 ILE B 795 1 9 HELIX 10 AB1 ASN B 799 ARG B 809 1 11 HELIX 11 AB2 SER B 895 GLY B 899 5 5 HELIX 12 AB3 CYS B 906 GLY B 914 1 9 SHEET 1 AA1 5 THR A 680 PHE A 685 0 SHEET 2 AA1 5 GLU A 978 TYR A 984 -1 O VAL A 979 N PHE A 685 SHEET 3 AA1 5 ASP A 732 TYR A 739 -1 N SER A 737 O ASN A 980 SHEET 4 AA1 5 VAL A 757 LEU A 765 -1 O PHE A 763 N TYR A 734 SHEET 5 AA1 5 ILE A 964 LEU A 965 -1 O ILE A 964 N ILE A 762 SHEET 1 AA2 5 THR A 680 PHE A 685 0 SHEET 2 AA2 5 GLU A 978 TYR A 984 -1 O VAL A 979 N PHE A 685 SHEET 3 AA2 5 ASP A 732 TYR A 739 -1 N SER A 737 O ASN A 980 SHEET 4 AA2 5 VAL A 757 LEU A 765 -1 O PHE A 763 N TYR A 734 SHEET 5 AA2 5 LEU A 970 LYS A 971 -1 O LEU A 970 N SER A 758 SHEET 1 AA3 7 GLU A 713 VAL A 714 0 SHEET 2 AA3 7 GLN A 724 LYS A 727 -1 O ILE A 725 N GLU A 713 SHEET 3 AA3 7 MET A 770 LEU A 774 -1 O ILE A 773 N GLN A 724 SHEET 4 AA3 7 THR A 825 LYS A 831 -1 O PHE A 828 N TYR A 772 SHEET 5 AA3 7 VAL A 834 ALA A 841 -1 O VAL A 836 N LYS A 829 SHEET 6 AA3 7 SER A 957 ILE A 959 -1 O PHE A 958 N ILE A 840 SHEET 7 AA3 7 LEU A 861 GLU A 862 1 N GLU A 862 O SER A 957 SHEET 1 AA4 5 HIS B 682 PHE B 685 0 SHEET 2 AA4 5 GLU B 978 HIS B 983 -1 O VAL B 979 N PHE B 685 SHEET 3 AA4 5 ASP B 732 TYR B 739 -1 N SER B 735 O LYS B 982 SHEET 4 AA4 5 GLY B 756 LEU B 765 -1 O PHE B 763 N TYR B 734 SHEET 5 AA4 5 ILE B 964 LEU B 965 -1 O ILE B 964 N ILE B 762 SHEET 1 AA5 5 HIS B 682 PHE B 685 0 SHEET 2 AA5 5 GLU B 978 HIS B 983 -1 O VAL B 979 N PHE B 685 SHEET 3 AA5 5 ASP B 732 TYR B 739 -1 N SER B 735 O LYS B 982 SHEET 4 AA5 5 GLY B 756 LEU B 765 -1 O PHE B 763 N TYR B 734 SHEET 5 AA5 5 LEU B 970 MET B 973 -1 O LEU B 970 N SER B 758 SHEET 1 AA6 7 GLU B 713 VAL B 714 0 SHEET 2 AA6 7 GLN B 724 LYS B 727 -1 O ILE B 725 N GLU B 713 SHEET 3 AA6 7 MET B 770 LEU B 774 -1 O ILE B 773 N GLN B 724 SHEET 4 AA6 7 THR B 825 LYS B 831 -1 O PHE B 828 N TYR B 772 SHEET 5 AA6 7 VAL B 834 ALA B 841 -1 O VAL B 836 N LYS B 829 SHEET 6 AA6 7 SER B 957 ILE B 959 -1 O PHE B 958 N ILE B 840 SHEET 7 AA6 7 LEU B 861 GLU B 862 1 N GLU B 862 O SER B 957 SSBOND 1 CYS A 688 CYS A 701 1555 1555 2.07 SSBOND 2 CYS A 783 CYS A 794 1555 1555 2.08 SSBOND 3 CYS A 906 CYS A 928 1555 1555 2.08 SSBOND 4 CYS B 688 CYS B 701 1555 1555 2.06 SSBOND 5 CYS B 783 CYS B 794 1555 1555 2.04 SSBOND 6 CYS B 906 CYS B 928 1555 1555 2.11 CISPEP 1 CYS A 783 PRO A 784 0 0.93 CISPEP 2 CYS B 783 PRO B 784 0 1.80 CRYST1 70.289 133.356 62.909 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014227 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007499 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015896 0.00000