HEADER IMMUNE SYSTEM 27-MAY-21 7N1C TITLE SARS-COV-2 RLQ PEPTIDE-SPECIFIC TCR PRLQ3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRLQ3 T CELL RECEPTOR ALPHA CHAIN; COMPND 3 CHAIN: D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PRLQ3 T CELL RECEPTOR BETA CHAIN; COMPND 7 CHAIN: E; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TCR ALPHA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: TCR BETA; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TCR, SARS-COV-2, SPIKE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR D.WU,R.A.MARIUZZA REVDAT 4 18-OCT-23 7N1C 1 JRNL REVDAT 3 02-FEB-22 7N1C 1 JRNL REVDAT 2 18-AUG-21 7N1C 1 JRNL REMARK REVDAT 1 28-JUL-21 7N1C 0 JRNL AUTH D.WU,A.KOLESNIKOV,R.YIN,J.D.GUEST,R.GOWTHAMAN,A.SHMELEV, JRNL AUTH 2 Y.SERDYUK,D.V.DIANOV,G.A.EFIMOV,B.G.PIERCE,R.A.MARIUZZA JRNL TITL STRUCTURAL ASSESSMENT OF HLA-A2-RESTRICTED SARS-COV-2 SPIKE JRNL TITL 2 EPITOPES RECOGNIZED BY PUBLIC AND PRIVATE T-CELL RECEPTORS. JRNL REF NAT COMMUN V. 13 19 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 35013235 JRNL DOI 10.1038/S41467-021-27669-8 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.WU,A.KOLESNIKOV,R.YIN,J.D.GUEST,R.GOWTHAMAN,A.SHMELEV, REMARK 1 AUTH 2 Y.SERDYUK,G.A.EFIMOV,B.G.PIERCE,R.A.MARIUZZA REMARK 1 TITL STRUCTURAL BASIS FOR RECOGNITION OF TWO HLA-A2-RESTRICTED REMARK 1 TITL 2 SARS-COV-2 SPIKE EPITOPES BY PUBLIC AND PRIVATE T CELL REMARK 1 TITL 3 RECEPTORS REMARK 1 REF BIORXIV 2021 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/2021.07.28.454232 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 37371 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.5570 - 4.5316 1.00 2698 186 0.1833 0.2128 REMARK 3 2 4.5316 - 3.5973 1.00 2595 136 0.1741 0.2097 REMARK 3 3 3.5973 - 3.1427 1.00 2582 123 0.1968 0.2487 REMARK 3 4 3.1427 - 2.8554 1.00 2570 117 0.2139 0.2604 REMARK 3 5 2.8554 - 2.6507 1.00 2551 118 0.2280 0.2672 REMARK 3 6 2.6507 - 2.4945 1.00 2512 134 0.2218 0.2654 REMARK 3 7 2.4945 - 2.3695 1.00 2524 144 0.2295 0.2484 REMARK 3 8 2.3695 - 2.2664 1.00 2528 134 0.2260 0.2848 REMARK 3 9 2.2664 - 2.1791 1.00 2511 125 0.2147 0.2986 REMARK 3 10 2.1791 - 2.1039 1.00 2459 151 0.2161 0.2559 REMARK 3 11 2.1039 - 2.0382 1.00 2508 158 0.2162 0.2272 REMARK 3 12 2.0382 - 1.9799 1.00 2501 120 0.2223 0.3000 REMARK 3 13 1.9799 - 1.9278 1.00 2477 146 0.2433 0.2553 REMARK 3 14 1.9278 - 1.8810 0.97 2446 117 0.2534 0.2850 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7N1C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1000257142. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 239229 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 46.557 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3TFK, 3FFC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CALCIUM ACETATE, 0.1M IMIDAZOLE REMARK 280 (PH 8.0), 17% (W/V) PEG 1500, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.04200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.33700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.96050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.33700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.04200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.96050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE D 198 REMARK 465 PRO D 199 REMARK 465 SER D 200 REMARK 465 PRO D 201 REMARK 465 GLU D 202 REMARK 465 SER D 203 REMARK 465 SER D 204 REMARK 465 ASP E 244 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN D 113 CG CD OE1 NE2 REMARK 470 LYS D 126 CG CD CE NZ REMARK 470 LYS E 76 CD CE NZ REMARK 470 GLN E 78 CG CD OE1 NE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASP E 61 CG REMARK 480 GLU E 66 CD REMARK 480 GLU E 83 CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 339 O HOH D 380 1.82 REMARK 500 N ASN D 143 O HOH D 301 1.96 REMARK 500 OE1 GLN E 225 O HOH E 301 2.00 REMARK 500 O HOH D 391 O HOH D 412 2.01 REMARK 500 O HOH E 407 O HOH E 423 2.02 REMARK 500 O TYR D 26 O HOH D 302 2.02 REMARK 500 NZ LYS D 14 OE1 GLU D 78 2.05 REMARK 500 OG SER E 168 O HOH E 302 2.10 REMARK 500 O PHE D 197 O HOH D 303 2.11 REMARK 500 OE1 GLU E 83 O HOH E 303 2.16 REMARK 500 O HOH D 353 O HOH D 358 2.17 REMARK 500 O HOH E 414 O HOH E 423 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH D 393 O HOH E 407 3545 2.09 REMARK 500 O HOH D 385 O HOH E 345 4445 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE D 91 CB - CA - C ANGL. DEV. = -13.7 DEGREES REMARK 500 ASN D 189 CB - CA - C ANGL. DEV. = 17.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU D 46 -60.22 -102.19 REMARK 500 THR D 67 58.44 35.03 REMARK 500 ALA D 82 178.43 179.72 REMARK 500 ALA D 94 -63.24 66.72 REMARK 500 ASP D 116 56.46 -143.87 REMARK 500 ASP D 129 47.59 -101.65 REMARK 500 SER D 140 1.18 -68.18 REMARK 500 ASN D 189 -168.28 -114.34 REMARK 500 ARG E 14 -5.23 75.17 REMARK 500 ASN E 49 -130.81 56.48 REMARK 500 PRO E 59 85.71 -67.25 REMARK 500 VAL E 71 -97.55 -122.33 REMARK 500 LEU E 183 128.58 -172.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PHE D 187 -11.60 REMARK 500 REMARK 500 REMARK: NULL DBREF 7N1C D 1 204 PDB 7N1C 7N1C 1 204 DBREF 7N1C E 1 244 PDB 7N1C 7N1C 1 244 SEQRES 1 D 204 GLN ARG VAL THR GLN PRO GLU LYS LEU LEU SER VAL PHE SEQRES 2 D 204 LYS GLY ALA PRO VAL GLU LEU LYS CYS ASN TYR SER TYR SEQRES 3 D 204 SER GLY SER PRO GLU LEU PHE TRP TYR VAL GLN TYR SER SEQRES 4 D 204 ARG GLN ARG LEU GLN LEU LEU LEU ARG HIS ILE SER ARG SEQRES 5 D 204 GLU SER ILE LYS GLY PHE THR ALA ASP LEU ASN LYS GLY SEQRES 6 D 204 GLU THR SER PHE HIS LEU LYS LYS PRO PHE ALA GLN GLU SEQRES 7 D 204 GLU ASP SER ALA MET TYR TYR CYS ALA LEU SER GLY PHE SEQRES 8 D 204 ASN ASN ALA GLY ASN MET LEU THR PHE GLY GLY GLY THR SEQRES 9 D 204 ARG LEU MET VAL LYS PRO ASN ILE GLN ASN PRO ASP PRO SEQRES 10 D 204 ALA VAL TYR GLN LEU ARG ASP SER LYS SER SER ASP LYS SEQRES 11 D 204 SER VAL CYS LEU PHE THR ASP PHE ASP SER GLN THR ASN SEQRES 12 D 204 VAL SER GLN SER LYS ASP SER ASP VAL TYR ILE THR ASP SEQRES 13 D 204 LYS CYS VAL LEU ASP MET ARG SER MET ASP PHE LYS SER SEQRES 14 D 204 ASN SER ALA VAL ALA TRP SER ASN LYS SER ASP PHE ALA SEQRES 15 D 204 CYS ALA ASN ALA PHE ASN ASN SER ILE ILE PRO GLU ASP SEQRES 16 D 204 THR PHE PHE PRO SER PRO GLU SER SER SEQRES 1 E 244 GLY VAL ALA GLN SER PRO ARG TYR LYS ILE ILE GLU LYS SEQRES 2 E 244 ARG GLN SER VAL ALA PHE TRP CYS ASN PRO ILE SER GLY SEQRES 3 E 244 HIS ALA THR LEU TYR TRP TYR GLN GLN ILE LEU GLY GLN SEQRES 4 E 244 GLY PRO LYS LEU LEU ILE GLN PHE GLN ASN ASN GLY VAL SEQRES 5 E 244 VAL ASP ASP SER GLN LEU PRO LYS ASP ARG PHE SER ALA SEQRES 6 E 244 GLU ARG LEU LYS GLY VAL ASP SER THR LEU LYS ILE GLN SEQRES 7 E 244 PRO ALA LYS LEU GLU ASP SER ALA VAL TYR LEU CYS ALA SEQRES 8 E 244 SER SER LEU GLY GLY ALA GLY GLY ALA ASP THR GLN TYR SEQRES 9 E 244 PHE GLY PRO GLY THR ARG LEU THR VAL LEU GLU ASP LEU SEQRES 10 E 244 LYS ASN VAL PHE PRO PRO GLU VAL ALA VAL PHE GLU PRO SEQRES 11 E 244 SER GLU ALA GLU ILE SER HIS THR GLN LYS ALA THR LEU SEQRES 12 E 244 VAL CYS LEU ALA THR GLY PHE TYR PRO ASP HIS VAL GLU SEQRES 13 E 244 LEU SER TRP TRP VAL ASN GLY LYS GLU VAL HIS SER GLY SEQRES 14 E 244 VAL CYS THR ASP PRO GLN PRO LEU LYS GLU GLN PRO ALA SEQRES 15 E 244 LEU ASN ASP SER ARG TYR ALA LEU SER SER ARG LEU ARG SEQRES 16 E 244 VAL SER ALA THR PHE TRP GLN ASN PRO ARG ASN HIS PHE SEQRES 17 E 244 ARG CYS GLN VAL GLN PHE TYR GLY LEU SER GLU ASN ASP SEQRES 18 E 244 GLU TRP THR GLN ASP ARG ALA LYS PRO VAL THR GLN ILE SEQRES 19 E 244 VAL SER ALA GLU ALA TRP GLY ARG ALA ASP FORMUL 3 HOH *267(H2 O) HELIX 1 AA1 GLN D 77 SER D 81 5 5 HELIX 2 AA2 ARG D 163 ASP D 166 5 4 HELIX 3 AA3 ALA D 182 PHE D 187 1 6 HELIX 4 AA4 LYS E 81 SER E 85 5 5 HELIX 5 AA5 ASP E 116 VAL E 120 5 5 HELIX 6 AA6 SER E 131 GLN E 139 1 9 HELIX 7 AA7 ALA E 198 ASN E 203 1 6 SHEET 1 AA1 2 ARG D 2 THR D 4 0 SHEET 2 AA1 2 ASN D 23 SER D 25 -1 O ASN D 23 N THR D 4 SHEET 1 AA2 5 LEU D 9 PHE D 13 0 SHEET 2 AA2 5 THR D 104 LYS D 109 1 O LYS D 109 N VAL D 12 SHEET 3 AA2 5 ALA D 82 GLY D 90 -1 N ALA D 82 O LEU D 106 SHEET 4 AA2 5 GLU D 31 GLN D 37 -1 N TYR D 35 O TYR D 85 SHEET 5 AA2 5 GLN D 44 ARG D 48 -1 O GLN D 44 N VAL D 36 SHEET 1 AA3 4 LEU D 9 PHE D 13 0 SHEET 2 AA3 4 THR D 104 LYS D 109 1 O LYS D 109 N VAL D 12 SHEET 3 AA3 4 ALA D 82 GLY D 90 -1 N ALA D 82 O LEU D 106 SHEET 4 AA3 4 MET D 97 PHE D 100 -1 O THR D 99 N LEU D 88 SHEET 1 AA4 3 VAL D 18 LEU D 20 0 SHEET 2 AA4 3 SER D 68 LYS D 73 -1 O LYS D 73 N VAL D 18 SHEET 3 AA4 3 THR D 59 ASN D 63 -1 N THR D 59 O LYS D 72 SHEET 1 AA5 8 VAL D 152 ILE D 154 0 SHEET 2 AA5 8 LYS D 168 SER D 176 -1 O TRP D 175 N TYR D 153 SHEET 3 AA5 8 SER D 131 THR D 136 -1 N CYS D 133 O ALA D 174 SHEET 4 AA5 8 ALA D 118 ASP D 124 -1 N TYR D 120 O LEU D 134 SHEET 5 AA5 8 GLU E 124 GLU E 129 -1 O GLU E 129 N ARG D 123 SHEET 6 AA5 8 LYS E 140 PHE E 150 -1 O VAL E 144 N PHE E 128 SHEET 7 AA5 8 TYR E 188 SER E 197 -1 O LEU E 194 N LEU E 143 SHEET 8 AA5 8 VAL E 170 THR E 172 -1 N CYS E 171 O ARG E 193 SHEET 1 AA6 8 CYS D 158 ASP D 161 0 SHEET 2 AA6 8 LYS D 168 SER D 176 -1 O SER D 169 N LEU D 160 SHEET 3 AA6 8 SER D 131 THR D 136 -1 N CYS D 133 O ALA D 174 SHEET 4 AA6 8 ALA D 118 ASP D 124 -1 N TYR D 120 O LEU D 134 SHEET 5 AA6 8 GLU E 124 GLU E 129 -1 O GLU E 129 N ARG D 123 SHEET 6 AA6 8 LYS E 140 PHE E 150 -1 O VAL E 144 N PHE E 128 SHEET 7 AA6 8 TYR E 188 SER E 197 -1 O LEU E 194 N LEU E 143 SHEET 8 AA6 8 LEU E 177 LYS E 178 -1 N LEU E 177 O ALA E 189 SHEET 1 AA7 4 ALA E 3 SER E 5 0 SHEET 2 AA7 4 VAL E 17 ASN E 22 -1 O TRP E 20 N SER E 5 SHEET 3 AA7 4 SER E 73 ILE E 77 -1 O LEU E 75 N PHE E 19 SHEET 4 AA7 4 PHE E 63 GLU E 66 -1 N SER E 64 O LYS E 76 SHEET 1 AA8 6 TYR E 8 GLU E 12 0 SHEET 2 AA8 6 THR E 109 LEU E 114 1 O LEU E 114 N ILE E 11 SHEET 3 AA8 6 ALA E 86 SER E 93 -1 N TYR E 88 O THR E 109 SHEET 4 AA8 6 THR E 29 GLN E 35 -1 N TYR E 33 O LEU E 89 SHEET 5 AA8 6 LYS E 42 GLN E 48 -1 O LEU E 44 N TRP E 32 SHEET 6 AA8 6 GLY E 51 ASP E 54 -1 O GLY E 51 N GLN E 48 SHEET 1 AA9 4 TYR E 8 GLU E 12 0 SHEET 2 AA9 4 THR E 109 LEU E 114 1 O LEU E 114 N ILE E 11 SHEET 3 AA9 4 ALA E 86 SER E 93 -1 N TYR E 88 O THR E 109 SHEET 4 AA9 4 TYR E 104 PHE E 105 -1 O TYR E 104 N SER E 92 SHEET 1 AB1 4 LYS E 164 VAL E 166 0 SHEET 2 AB1 4 VAL E 155 VAL E 161 -1 N VAL E 161 O LYS E 164 SHEET 3 AB1 4 HIS E 207 PHE E 214 -1 O GLN E 211 N SER E 158 SHEET 4 AB1 4 GLN E 233 TRP E 240 -1 O GLN E 233 N PHE E 214 SSBOND 1 CYS D 22 CYS D 86 1555 1555 2.06 SSBOND 2 CYS D 133 CYS D 183 1555 1555 2.05 SSBOND 3 CYS D 158 CYS E 171 1555 1555 1.95 SSBOND 4 CYS E 21 CYS E 90 1555 1555 1.86 SSBOND 5 CYS E 145 CYS E 210 1555 1555 2.03 CISPEP 1 SER E 5 PRO E 6 0 -2.36 CISPEP 2 GLN E 78 PRO E 79 0 -6.22 CISPEP 3 TYR E 151 PRO E 152 0 -3.64 CRYST1 42.084 101.921 104.674 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023762 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009812 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009553 0.00000