HEADER GENE REGULATION 03-JUN-21 7N42 TITLE CRYSTAL STRUCTURE OF THE TANDEM BROMODOMAIN OF HUMAN TAF1 (TAF1-T) TITLE 2 BOUND TO ZS1-681 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CELL CYCLE GENE 1 PROTEIN,TBP-ASSOCIATED FACTOR 250 KDA, COMPND 5 P250,TRANSCRIPTION INITIATION FACTOR TFIID 250 KDA SUBUNIT,TAFII250; COMPND 6 EC: 2.3.1.48,2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TAF1, BA2R, CCG1, CCGS, TAF2A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC28.BSA4 KEYWDS BROMODOMAIN, TAF1, NON-BET, BET, KINASE INHIBITOR, ATR, DUAL BRD- KEYWDS 2 KINASE, TRANSFERASE, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR M.R.KARIM,E.SCHONBRUNN REVDAT 2 18-OCT-23 7N42 1 REMARK REVDAT 1 09-JUN-21 7N42 0 JRNL AUTH M.R.KARIM,E.SCHONBRUNN JRNL TITL CRYSTAL STRUCTURE OF THE TANDEM BROMODOMAIN OF HUMAN TAF1 JRNL TITL 2 (TAF1-T) BOUND TO ZS1-681 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4085 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 24660 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1234 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.5900 - 3.9600 1.00 2770 147 0.1567 0.1820 REMARK 3 2 3.9600 - 3.1400 1.00 2656 139 0.1474 0.2313 REMARK 3 3 3.1400 - 2.7400 1.00 2603 137 0.1677 0.1785 REMARK 3 4 2.7400 - 2.4900 1.00 2599 137 0.1677 0.2158 REMARK 3 5 2.4900 - 2.3200 1.00 2570 135 0.1589 0.2126 REMARK 3 6 2.3100 - 2.1800 1.00 2556 135 0.1528 0.1948 REMARK 3 7 2.1800 - 2.0700 1.00 2586 136 0.1608 0.1665 REMARK 3 8 2.0700 - 1.9800 1.00 2541 134 0.1682 0.2269 REMARK 3 9 1.9800 - 1.9000 0.99 2545 134 0.2246 0.2996 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.570 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1380 THROUGH 1397 ) REMARK 3 ORIGIN FOR THE GROUP (A):-131.6462-147.8894 142.8779 REMARK 3 T TENSOR REMARK 3 T11: 0.2609 T22: 0.2344 REMARK 3 T33: 0.1866 T12: -0.0060 REMARK 3 T13: 0.0351 T23: -0.0547 REMARK 3 L TENSOR REMARK 3 L11: 4.8461 L22: 2.4564 REMARK 3 L33: 4.2644 L12: 2.3045 REMARK 3 L13: -4.4698 L23: -2.3910 REMARK 3 S TENSOR REMARK 3 S11: 0.3547 S12: -0.1374 S13: 0.7380 REMARK 3 S21: 0.4793 S22: 0.0488 S23: 0.2875 REMARK 3 S31: -0.5142 S32: -0.1238 S33: -0.3639 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1398 THROUGH 1441 ) REMARK 3 ORIGIN FOR THE GROUP (A):-130.6642-148.3330 126.6887 REMARK 3 T TENSOR REMARK 3 T11: 0.1421 T22: 0.1286 REMARK 3 T33: 0.1798 T12: 0.0158 REMARK 3 T13: -0.0128 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: 2.5541 L22: 2.2364 REMARK 3 L33: 3.4380 L12: 0.5628 REMARK 3 L13: -0.2473 L23: -0.5537 REMARK 3 S TENSOR REMARK 3 S11: -0.0315 S12: 0.0494 S13: 0.2230 REMARK 3 S21: 0.0226 S22: 0.1206 S23: 0.0604 REMARK 3 S31: -0.1586 S32: -0.3419 S33: -0.0983 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1442 THROUGH 1464 ) REMARK 3 ORIGIN FOR THE GROUP (A):-125.9434-157.1495 128.4023 REMARK 3 T TENSOR REMARK 3 T11: 0.1776 T22: 0.1337 REMARK 3 T33: 0.1998 T12: -0.0185 REMARK 3 T13: 0.0040 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 2.8211 L22: 1.0822 REMARK 3 L33: 6.5414 L12: 0.6584 REMARK 3 L13: -2.6781 L23: -0.4457 REMARK 3 S TENSOR REMARK 3 S11: -0.2070 S12: 0.0532 S13: -0.0896 REMARK 3 S21: 0.0581 S22: -0.0106 S23: -0.0572 REMARK 3 S31: 0.3239 S32: -0.2571 S33: 0.2601 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1465 THROUGH 1483 ) REMARK 3 ORIGIN FOR THE GROUP (A):-119.8978-154.2539 135.9277 REMARK 3 T TENSOR REMARK 3 T11: 0.1459 T22: 0.1777 REMARK 3 T33: 0.1585 T12: 0.0056 REMARK 3 T13: -0.0525 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 4.6506 L22: 2.2018 REMARK 3 L33: 5.1618 L12: 0.8683 REMARK 3 L13: -4.1904 L23: -1.2056 REMARK 3 S TENSOR REMARK 3 S11: 0.0445 S12: -0.5009 S13: -0.0212 REMARK 3 S21: 0.2518 S22: 0.0564 S23: -0.1485 REMARK 3 S31: 0.1269 S32: 0.4338 S33: -0.0383 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1484 THROUGH 1501 ) REMARK 3 ORIGIN FOR THE GROUP (A):-136.0350-160.7133 150.1228 REMARK 3 T TENSOR REMARK 3 T11: 0.4337 T22: 0.3311 REMARK 3 T33: 0.1753 T12: -0.0554 REMARK 3 T13: 0.0086 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 2.9590 L22: 2.0997 REMARK 3 L33: 3.8502 L12: 1.3240 REMARK 3 L13: 1.7975 L23: 1.7996 REMARK 3 S TENSOR REMARK 3 S11: 0.4385 S12: -0.3808 S13: -0.1456 REMARK 3 S21: 0.8781 S22: -0.2724 S23: 0.0514 REMARK 3 S31: 0.4178 S32: -0.0103 S33: -0.1184 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1502 THROUGH 1528 ) REMARK 3 ORIGIN FOR THE GROUP (A):-134.2979-178.5610 133.8282 REMARK 3 T TENSOR REMARK 3 T11: 0.1537 T22: 0.2082 REMARK 3 T33: 0.1898 T12: 0.0070 REMARK 3 T13: -0.0426 T23: 0.0404 REMARK 3 L TENSOR REMARK 3 L11: 2.4070 L22: 1.8193 REMARK 3 L33: 7.0467 L12: -0.3312 REMARK 3 L13: -2.9248 L23: 0.9038 REMARK 3 S TENSOR REMARK 3 S11: -0.1312 S12: -0.2657 S13: -0.2923 REMARK 3 S21: 0.2654 S22: -0.0211 S23: -0.2174 REMARK 3 S31: 0.6120 S32: 0.4559 S33: 0.1073 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1529 THROUGH 1583 ) REMARK 3 ORIGIN FOR THE GROUP (A):-138.5838-169.9714 124.6722 REMARK 3 T TENSOR REMARK 3 T11: 0.1157 T22: 0.1192 REMARK 3 T33: 0.1569 T12: 0.0182 REMARK 3 T13: -0.0235 T23: -0.0262 REMARK 3 L TENSOR REMARK 3 L11: 1.9484 L22: 1.6144 REMARK 3 L33: 4.1333 L12: 0.6389 REMARK 3 L13: -1.4693 L23: -0.6152 REMARK 3 S TENSOR REMARK 3 S11: 0.0813 S12: -0.0169 S13: 0.0550 REMARK 3 S21: 0.0445 S22: -0.0714 S23: 0.0730 REMARK 3 S31: -0.2074 S32: -0.0613 S33: -0.0185 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1584 THROUGH 1606 ) REMARK 3 ORIGIN FOR THE GROUP (A):-139.7311-183.7651 122.8996 REMARK 3 T TENSOR REMARK 3 T11: 0.1881 T22: 0.1381 REMARK 3 T33: 0.2608 T12: -0.0332 REMARK 3 T13: 0.0054 T23: -0.0548 REMARK 3 L TENSOR REMARK 3 L11: 3.0937 L22: 2.6148 REMARK 3 L33: 7.0852 L12: 1.0057 REMARK 3 L13: -3.2376 L23: -1.6628 REMARK 3 S TENSOR REMARK 3 S11: -0.2370 S12: 0.1771 S13: -0.4166 REMARK 3 S21: -0.0666 S22: -0.0292 S23: -0.1126 REMARK 3 S31: 0.7537 S32: -0.1948 S33: 0.2232 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1607 THROUGH 1626 ) REMARK 3 ORIGIN FOR THE GROUP (A):-148.0597-177.1949 146.4949 REMARK 3 T TENSOR REMARK 3 T11: 0.4002 T22: 0.3631 REMARK 3 T33: 0.1824 T12: -0.0666 REMARK 3 T13: 0.0306 T23: 0.0647 REMARK 3 L TENSOR REMARK 3 L11: 5.2610 L22: 5.6572 REMARK 3 L33: 6.2506 L12: -3.8745 REMARK 3 L13: -0.5828 L23: 2.9720 REMARK 3 S TENSOR REMARK 3 S11: -0.2864 S12: -0.2420 S13: -0.0691 REMARK 3 S21: 0.8133 S22: 0.1024 S23: 0.4757 REMARK 3 S31: 0.4682 S32: -0.5233 S33: 0.1130 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7N42 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1000257315. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24715 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.53100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7K03 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15 M MGCL2, 0.1 M BIS-TRIS PH 5.5, REMARK 280 15% PEG 3,350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.79950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.29500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.23150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.29500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.79950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.23150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1371 REMARK 465 MET A 1372 REMARK 465 SER A 1373 REMARK 465 ILE A 1374 REMARK 465 HIS A 1375 REMARK 465 ARG A 1376 REMARK 465 ARG A 1377 REMARK 465 ARG A 1378 REMARK 465 THR A 1379 REMARK 465 GLU A 1627 REMARK 465 GLU A 1628 REMARK 465 ALA A 1629 REMARK 465 GLU A 1630 REMARK 465 LEU A 1631 REMARK 465 GLU A 1632 REMARK 465 SER A 1633 REMARK 465 LEU A 1634 REMARK 465 ASP A 1635 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1623 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASP A 1502 CG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1941 O HOH A 2018 2.10 REMARK 500 O HOH A 1814 O HOH A 1950 2.14 REMARK 500 OE2 GLU A 1444 O HOH A 1801 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1985 O HOH A 2035 44-17 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A1625 34.98 -75.72 REMARK 500 REMARK 500 REMARK: NULL DBREF 7N42 A 1373 1635 UNP P21675 TAF1_HUMAN 1373 1635 SEQADV 7N42 SER A 1371 UNP P21675 EXPRESSION TAG SEQADV 7N42 MET A 1372 UNP P21675 EXPRESSION TAG SEQRES 1 A 265 SER MET SER ILE HIS ARG ARG ARG THR ASP PRO MET VAL SEQRES 2 A 265 THR LEU SER SER ILE LEU GLU SER ILE ILE ASN ASP MET SEQRES 3 A 265 ARG ASP LEU PRO ASN THR TYR PRO PHE HIS THR PRO VAL SEQRES 4 A 265 ASN ALA LYS VAL VAL LYS ASP TYR TYR LYS ILE ILE THR SEQRES 5 A 265 ARG PRO MET ASP LEU GLN THR LEU ARG GLU ASN VAL ARG SEQRES 6 A 265 LYS ARG LEU TYR PRO SER ARG GLU GLU PHE ARG GLU HIS SEQRES 7 A 265 LEU GLU LEU ILE VAL LYS ASN SER ALA THR TYR ASN GLY SEQRES 8 A 265 PRO LYS HIS SER LEU THR GLN ILE SER GLN SER MET LEU SEQRES 9 A 265 ASP LEU CYS ASP GLU LYS LEU LYS GLU LYS GLU ASP LYS SEQRES 10 A 265 LEU ALA ARG LEU GLU LYS ALA ILE ASN PRO LEU LEU ASP SEQRES 11 A 265 ASP ASP ASP GLN VAL ALA PHE SER PHE ILE LEU ASP ASN SEQRES 12 A 265 ILE VAL THR GLN LYS MET MET ALA VAL PRO ASP SER TRP SEQRES 13 A 265 PRO PHE HIS HIS PRO VAL ASN LYS LYS PHE VAL PRO ASP SEQRES 14 A 265 TYR TYR LYS VAL ILE VAL ASN PRO MET ASP LEU GLU THR SEQRES 15 A 265 ILE ARG LYS ASN ILE SER LYS HIS LYS TYR GLN SER ARG SEQRES 16 A 265 GLU SER PHE LEU ASP ASP VAL ASN LEU ILE LEU ALA ASN SEQRES 17 A 265 SER VAL LYS TYR ASN GLY PRO GLU SER GLN TYR THR LYS SEQRES 18 A 265 THR ALA GLN GLU ILE VAL ASN VAL CYS TYR GLN THR LEU SEQRES 19 A 265 THR GLU TYR ASP GLU HIS LEU THR GLN LEU GLU LYS ASP SEQRES 20 A 265 ILE CYS THR ALA LYS GLU ALA ALA LEU GLU GLU ALA GLU SEQRES 21 A 265 LEU GLU SER LEU ASP HET EDO A1701 4 HET EDO A1702 4 HET EDO A1703 4 HET EDO A1704 4 HET EDO A1705 4 HET EDO A1706 4 HET EDO A1707 4 HET 06M A1708 36 HET DMS A1709 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM 06M 6-(BUT-3-EN-1-YL)-4-[6-{1-[(R)-S- HETNAM 2 06M METHANESULFONIMIDOYL]CYCLOPROPYL}-2-(1H-PYRROLO[2,3- HETNAM 3 06M B]PYRIDIN-4-YL)PYRIMIDIN-4-YL]-1,6-DIHYDRO-7H- HETNAM 4 06M PYRROLO[2,3-C]PYRIDIN-7-ONE HETNAM DMS DIMETHYL SULFOXIDE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 7(C2 H6 O2) FORMUL 9 06M C26 H25 N7 O2 S FORMUL 10 DMS C2 H6 O S FORMUL 11 HOH *263(H2 O) HELIX 1 AA1 ASP A 1380 ASP A 1398 1 19 HELIX 2 AA2 THR A 1402 HIS A 1406 5 5 HELIX 3 AA3 ASP A 1416 ILE A 1421 1 6 HELIX 4 AA4 ASP A 1426 LYS A 1436 1 11 HELIX 5 AA5 SER A 1441 ASN A 1460 1 20 HELIX 6 AA6 HIS A 1464 LYS A 1484 1 21 HELIX 7 AA7 LYS A 1484 ASN A 1496 1 13 HELIX 8 AA8 PRO A 1497 ASP A 1500 5 4 HELIX 9 AA9 ASP A 1501 LYS A 1518 1 18 HELIX 10 AB1 SER A 1525 HIS A 1529 5 5 HELIX 11 AB2 ASP A 1539 ILE A 1544 1 6 HELIX 12 AB3 ASP A 1549 LYS A 1559 1 11 HELIX 13 AB4 SER A 1564 GLY A 1584 1 21 HELIX 14 AB5 SER A 1587 TYR A 1607 1 21 HELIX 15 AB6 TYR A 1607 ALA A 1625 1 19 CRYST1 45.599 54.463 122.590 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021930 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018361 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008157 0.00000 CONECT 2020 2021 2022 CONECT 2021 2020 CONECT 2022 2020 2023 CONECT 2023 2022 CONECT 2024 2025 2026 CONECT 2025 2024 CONECT 2026 2024 2027 CONECT 2027 2026 CONECT 2028 2029 2030 CONECT 2029 2028 CONECT 2030 2028 2031 CONECT 2031 2030 CONECT 2032 2033 2034 CONECT 2033 2032 CONECT 2034 2032 2035 CONECT 2035 2034 CONECT 2036 2037 2038 CONECT 2037 2036 CONECT 2038 2036 2039 CONECT 2039 2038 CONECT 2040 2041 2042 CONECT 2041 2040 CONECT 2042 2040 2043 CONECT 2043 2042 CONECT 2044 2045 2046 CONECT 2045 2044 CONECT 2046 2044 2047 CONECT 2047 2046 CONECT 2048 2061 2062 CONECT 2049 2050 2062 CONECT 2050 2049 2063 2076 CONECT 2051 2063 2064 CONECT 2052 2053 2065 2067 2083 CONECT 2053 2052 2067 CONECT 2054 2058 2079 CONECT 2055 2056 2079 2081 CONECT 2056 2055 2057 2080 CONECT 2057 2056 2058 2073 CONECT 2058 2054 2057 2059 CONECT 2059 2058 2068 2075 CONECT 2060 2061 2075 2077 CONECT 2061 2048 2060 2063 CONECT 2062 2048 2049 CONECT 2063 2050 2051 2061 CONECT 2064 2051 2076 CONECT 2065 2052 2068 2077 CONECT 2066 2083 CONECT 2067 2052 2053 CONECT 2068 2059 2065 CONECT 2069 2070 2079 CONECT 2070 2069 2071 CONECT 2071 2070 2072 CONECT 2072 2071 CONECT 2073 2057 2074 CONECT 2074 2073 2080 CONECT 2075 2059 2060 CONECT 2076 2050 2064 CONECT 2077 2060 2065 CONECT 2078 2083 CONECT 2079 2054 2055 2069 CONECT 2080 2056 2074 CONECT 2081 2055 CONECT 2082 2083 CONECT 2083 2052 2066 2078 2082 CONECT 2084 2085 2086 2087 CONECT 2085 2084 CONECT 2086 2084 CONECT 2087 2084 MASTER 421 0 9 15 0 0 0 6 2349 1 68 21 END