HEADER OXIDOREDUCTASE 08-JUN-21 7N6F
TITLE CO-COMPLEX CYP46A1 WITH COMPOUND 3F
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: CHOLESTEROL 24-HYDROXYLASE;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: CH24H,CHOLESTEROL 24-MONOOXYGENASE,CHOLESTEROL 24S-
COMPND 5 HYDROXYLASE,CYTOCHROME P450 46A1;
COMPND 6 EC: 1.14.14.25;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: CYP46A1, CYP46;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS CYP46A1, CH24H, SBDD, DRUG DISCOVERY, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR W.LANE,S.C.GAY
REVDAT 3 18-OCT-23 7N6F 1 REMARK
REVDAT 2 10-AUG-22 7N6F 1 AUTHOR
REVDAT 1 27-JUL-22 7N6F 0
JRNL AUTH S.IKEDA,Y.KAJITA,M.MIYAMOTO,K.MATSUMIYA,T.ISHII,T.NISHI,
JRNL AUTH 2 S.C.GAY,W.LANE,C.C.CONSTANTINESCU,D.ALAGILLE,C.PAPIN,
JRNL AUTH 3 G.TAMAGNAN,T.KUROITA,T.KOIKE
JRNL TITL DESIGN AND SYNTHESIS OF ARYL-PIPERIDINE DERIVATIVES AS
JRNL TITL 2 POTENT AND SELECTIVE PET TRACERS FOR CHOLESTEROL
JRNL TITL 3 24-HYDROXYLASE (CH24H)
JRNL REF EUR.J.MED.CHEM. V. 240 14612 2022
JRNL REFN ISSN 0223-5234
JRNL DOI 10.1016/J.EJMECH.2022.114612
REMARK 2
REMARK 2 RESOLUTION. 1.40 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.8.0267
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : NULL
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.81
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 90.4
REMARK 3 NUMBER OF REFLECTIONS : 81954
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE
REMARK 3 FREE R VALUE TEST SET SELECTION : NULL
REMARK 3 R VALUE (WORKING + TEST SET) : NULL
REMARK 3 R VALUE (WORKING SET) : 0.160
REMARK 3 FREE R VALUE : 0.185
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.999
REMARK 3 FREE R VALUE TEST SET COUNT : 4097
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44
REMARK 3 REFLECTION IN BIN (WORKING SET) : 3606
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 57.12
REMARK 3 BIN R VALUE (WORKING SET) : 0.2400
REMARK 3 BIN FREE R VALUE SET COUNT : 197
REMARK 3 BIN FREE R VALUE : 0.2470
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 3511
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 109
REMARK 3 SOLVENT ATOMS : 312
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.30
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.01400
REMARK 3 B22 (A**2) : 0.00400
REMARK 3 B33 (A**2) : 0.01000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.061
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.062
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.037
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.948
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3879 ; 0.013 ; 0.013
REMARK 3 BOND LENGTHS OTHERS (A): 3768 ; 0.001 ; 0.017
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5276 ; 1.903 ; 1.685
REMARK 3 BOND ANGLES OTHERS (DEGREES): 8680 ; 1.526 ; 1.596
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 484 ; 5.781 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 222 ;31.817 ;20.766
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 694 ;13.974 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;17.219 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 474 ; 0.104 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4370 ; 0.011 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 944 ; 0.007 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 827 ; 0.234 ; 0.200
REMARK 3 NON-BONDED CONTACTS OTHERS (A): 61 ; 0.210 ; 0.200
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1839 ; 0.177 ; 0.200
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 220 ; 0.194 ; 0.200
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1812 ; 1.750 ; 1.733
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1811 ; 1.736 ; 1.732
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2276 ; 2.525 ; 2.598
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2277 ; 2.527 ; 2.598
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2067 ; 2.947 ; 2.101
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2068 ; 2.947 ; 2.102
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2976 ; 4.523 ; 2.993
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2977 ; 4.522 ; 2.995
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK BULK SOLVENT
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR
REMARK 3 RIDING POSITIONS
REMARK 4
REMARK 4 7N6F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUN-21.
REMARK 100 THE DEPOSITION ID IS D_1000257424.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 16-JAN-15
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ALS
REMARK 200 BEAMLINE : 5.0.3
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.976
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 81954
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 90.4
REMARK 200 DATA REDUNDANCY : 6.400
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : 0.04800
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 31.9500
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42
REMARK 200 COMPLETENESS FOR SHELL (%) : 55.3
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : 0.52100
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 7LRL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 41.20
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4M CACL2, 10-20% PEG3350, VAPOR
REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 290K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.97150
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.81650
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.79250
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.81650
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.97150
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.79250
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 21
REMARK 465 HIS A 22
REMARK 465 HIS A 23
REMARK 465 HIS A 24
REMARK 465 HIS A 25
REMARK 465 HIS A 26
REMARK 465 ARG A 38
REMARK 465 PRO A 39
REMARK 465 SER A 40
REMARK 465 PHE A 41
REMARK 465 LEU A 42
REMARK 465 LEU A 43
REMARK 465 GLY A 44
REMARK 465 HIS A 45
REMARK 465 LEU A 46
REMARK 465 PRO A 47
REMARK 465 CYS A 48
REMARK 465 PHE A 49
REMARK 465 TRP A 50
REMARK 465 LYS A 51
REMARK 465 LYS A 52
REMARK 465 ASP A 53
REMARK 465 GLU A 54
REMARK 465 VAL A 55
REMARK 465 GLY A 56
REMARK 465 THR A 228
REMARK 465 LEU A 229
REMARK 465 ALA A 230
REMARK 465 LYS A 231
REMARK 465 PHE A 232
REMARK 465 LEU A 233
REMARK 465 PRO A 234
REMARK 465 GLY A 235
REMARK 465 GLY A 490
REMARK 465 TRP A 491
REMARK 465 GLN A 492
REMARK 465 PRO A 493
REMARK 465 ALA A 494
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 HIS A 27 CG ND1 CD2 CE1 NE2
REMARK 470 SER A 28 OG
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O GLN A 473 O HOH A 601 2.04
REMARK 500 O3 GOL A 507 O HOH A 602 2.06
REMARK 500 OE1 GLN A 181 O HOH A 603 2.11
REMARK 500 OE2 GLU A 155 OE1 GLU A 159 2.13
REMARK 500 OD1 ASP A 402 O HOH A 604 2.14
REMARK 500 O HOH A 619 O HOH A 840 2.15
REMARK 500 O ILE A 33 NH1 ARG A 76 2.19
REMARK 500 N LYS A 104 O1 EDO A 504 2.19
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LEU A 120 -84.77 -118.03
REMARK 500 GLN A 175 -41.13 -143.05
REMARK 500 ASN A 388 62.83 61.11
REMARK 500 PHE A 428 63.42 -155.96
REMARK 500 SER A 431 -168.92 61.91
REMARK 500 GLN A 473 -115.30 -102.98
REMARK 500 ALA A 474 -53.03 77.43
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 HEM A 501 FE
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 CYS A 437 SG
REMARK 620 2 HEM A 501 NA 93.1
REMARK 620 3 HEM A 501 NB 89.4 91.9
REMARK 620 4 HEM A 501 NC 84.9 177.9 88.6
REMARK 620 5 HEM A 501 ND 93.3 89.9 176.6 89.7
REMARK 620 6 0I1 A 502 N16 176.3 89.8 88.2 92.2 89.0
REMARK 620 N 1 2 3 4 5
DBREF 7N6F A 28 494 UNP Q9Y6A2 CP46A_HUMAN 28 494
SEQADV 7N6F MET A 21 UNP Q9Y6A2 INITIATING METHIONINE
SEQADV 7N6F HIS A 22 UNP Q9Y6A2 EXPRESSION TAG
SEQADV 7N6F HIS A 23 UNP Q9Y6A2 EXPRESSION TAG
SEQADV 7N6F HIS A 24 UNP Q9Y6A2 EXPRESSION TAG
SEQADV 7N6F HIS A 25 UNP Q9Y6A2 EXPRESSION TAG
SEQADV 7N6F HIS A 26 UNP Q9Y6A2 EXPRESSION TAG
SEQADV 7N6F HIS A 27 UNP Q9Y6A2 EXPRESSION TAG
SEQRES 1 A 474 MET HIS HIS HIS HIS HIS HIS SER ARG TYR GLU HIS ILE
SEQRES 2 A 474 PRO GLY PRO PRO ARG PRO SER PHE LEU LEU GLY HIS LEU
SEQRES 3 A 474 PRO CYS PHE TRP LYS LYS ASP GLU VAL GLY GLY ARG VAL
SEQRES 4 A 474 LEU GLN ASP VAL PHE LEU ASP TRP ALA LYS LYS TYR GLY
SEQRES 5 A 474 PRO VAL VAL ARG VAL ASN VAL PHE HIS LYS THR SER VAL
SEQRES 6 A 474 ILE VAL THR SER PRO GLU SER VAL LYS LYS PHE LEU MET
SEQRES 7 A 474 SER THR LYS TYR ASN LYS ASP SER LYS MET TYR ARG ALA
SEQRES 8 A 474 LEU GLN THR VAL PHE GLY GLU ARG LEU PHE GLY GLN GLY
SEQRES 9 A 474 LEU VAL SER GLU CYS ASN TYR GLU ARG TRP HIS LYS GLN
SEQRES 10 A 474 ARG ARG VAL ILE ASP LEU ALA PHE SER ARG SER SER LEU
SEQRES 11 A 474 VAL SER LEU MET GLU THR PHE ASN GLU LYS ALA GLU GLN
SEQRES 12 A 474 LEU VAL GLU ILE LEU GLU ALA LYS ALA ASP GLY GLN THR
SEQRES 13 A 474 PRO VAL SER MET GLN ASP MET LEU THR TYR THR ALA MET
SEQRES 14 A 474 ASP ILE LEU ALA LYS ALA ALA PHE GLY MET GLU THR SER
SEQRES 15 A 474 MET LEU LEU GLY ALA GLN LYS PRO LEU SER GLN ALA VAL
SEQRES 16 A 474 LYS LEU MET LEU GLU GLY ILE THR ALA SER ARG ASN THR
SEQRES 17 A 474 LEU ALA LYS PHE LEU PRO GLY LYS ARG LYS GLN LEU ARG
SEQRES 18 A 474 GLU VAL ARG GLU SER ILE ARG PHE LEU ARG GLN VAL GLY
SEQRES 19 A 474 ARG ASP TRP VAL GLN ARG ARG ARG GLU ALA LEU LYS ARG
SEQRES 20 A 474 GLY GLU GLU VAL PRO ALA ASP ILE LEU THR GLN ILE LEU
SEQRES 21 A 474 LYS ALA GLU GLU GLY ALA GLN ASP ASP GLU GLY LEU LEU
SEQRES 22 A 474 ASP ASN PHE VAL THR PHE PHE ILE ALA GLY HIS GLU THR
SEQRES 23 A 474 SER ALA ASN HIS LEU ALA PHE THR VAL MET GLU LEU SER
SEQRES 24 A 474 ARG GLN PRO GLU ILE VAL ALA ARG LEU GLN ALA GLU VAL
SEQRES 25 A 474 ASP GLU VAL ILE GLY SER LYS ARG TYR LEU ASP PHE GLU
SEQRES 26 A 474 ASP LEU GLY ARG LEU GLN TYR LEU SER GLN VAL LEU LYS
SEQRES 27 A 474 GLU SER LEU ARG LEU TYR PRO PRO ALA TRP GLY THR PHE
SEQRES 28 A 474 ARG LEU LEU GLU GLU GLU THR LEU ILE ASP GLY VAL ARG
SEQRES 29 A 474 VAL PRO GLY ASN THR PRO LEU LEU PHE SER THR TYR VAL
SEQRES 30 A 474 MET GLY ARG MET ASP THR TYR PHE GLU ASP PRO LEU THR
SEQRES 31 A 474 PHE ASN PRO ASP ARG PHE GLY PRO GLY ALA PRO LYS PRO
SEQRES 32 A 474 ARG PHE THR TYR PHE PRO PHE SER LEU GLY HIS ARG SER
SEQRES 33 A 474 CYS ILE GLY GLN GLN PHE ALA GLN MET GLU VAL LYS VAL
SEQRES 34 A 474 VAL MET ALA LYS LEU LEU GLN ARG LEU GLU PHE ARG LEU
SEQRES 35 A 474 VAL PRO GLY GLN ARG PHE GLY LEU GLN GLU GLN ALA THR
SEQRES 36 A 474 LEU LYS PRO LEU ASP PRO VAL LEU CYS THR LEU ARG PRO
SEQRES 37 A 474 ARG GLY TRP GLN PRO ALA
HET HEM A 501 43
HET 0I1 A 502 26
HET EDO A 503 4
HET EDO A 504 4
HET EDO A 505 4
HET EDO A 506 4
HET GOL A 507 6
HET GOL A 508 6
HET GOL A 509 6
HET GOL A 510 6
HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE
HETNAM 0I1 (3-FLUOROAZETIDIN-1-YL){1-[4-(4-FLUOROPHENYL)PYRIMIDIN-
HETNAM 2 0I1 5-YL]PIPERIDIN-4-YL}METHANONE
HETNAM EDO 1,2-ETHANEDIOL
HETNAM GOL GLYCEROL
HETSYN HEM HEME
HETSYN EDO ETHYLENE GLYCOL
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 2 HEM C34 H32 FE N4 O4
FORMUL 3 0I1 C19 H20 F2 N4 O
FORMUL 4 EDO 4(C2 H6 O2)
FORMUL 8 GOL 4(C3 H8 O3)
FORMUL 12 HOH *312(H2 O)
HELIX 1 AA1 VAL A 59 GLY A 72 1 14
HELIX 2 AA2 SER A 89 MET A 98 1 10
HELIX 3 AA3 ASP A 105 MET A 108 5 4
HELIX 4 AA4 TYR A 109 GLN A 113 1 5
HELIX 5 AA5 ASN A 130 ASP A 142 1 13
HELIX 6 AA6 LEU A 143 PHE A 145 5 3
HELIX 7 AA7 SER A 146 SER A 152 1 7
HELIX 8 AA8 LEU A 153 ALA A 170 1 18
HELIX 9 AA9 MET A 180 GLY A 198 1 19
HELIX 10 AB1 SER A 202 GLY A 206 5 5
HELIX 11 AB2 GLN A 208 ASN A 227 1 20
HELIX 12 AB3 ARG A 237 ARG A 267 1 31
HELIX 13 AB4 ASP A 274 GLU A 283 1 10
HELIX 14 AB5 ASP A 289 SER A 319 1 31
HELIX 15 AB6 GLN A 321 ILE A 336 1 16
HELIX 16 AB7 ASP A 343 LEU A 350 1 8
HELIX 17 AB8 LEU A 350 TYR A 364 1 15
HELIX 18 AB9 THR A 395 ARG A 400 1 6
HELIX 19 AC1 ASN A 412 GLY A 417 5 6
HELIX 20 AC2 GLY A 439 ARG A 457 1 19
SHEET 1 AA1 4 VAL A 74 VAL A 79 0
SHEET 2 AA1 4 LYS A 82 VAL A 87 -1 O ILE A 86 N VAL A 75
SHEET 3 AA1 4 THR A 389 SER A 394 1 O LEU A 392 N VAL A 85
SHEET 4 AA1 4 GLY A 369 LEU A 374 -1 N ARG A 372 O LEU A 391
SHEET 1 AA2 2 THR A 114 VAL A 115 0
SHEET 2 AA2 2 GLU A 118 ARG A 119 -1 O GLU A 118 N VAL A 115
SHEET 1 AA3 3 VAL A 178 SER A 179 0
SHEET 2 AA3 3 LEU A 483 PRO A 488 -1 O CYS A 484 N VAL A 178
SHEET 3 AA3 3 LEU A 458 LEU A 462 -1 N GLU A 459 O ARG A 487
SHEET 1 AA4 2 THR A 378 ILE A 380 0
SHEET 2 AA4 2 VAL A 383 VAL A 385 -1 O VAL A 383 N ILE A 380
SHEET 1 AA5 2 LEU A 470 GLU A 472 0
SHEET 2 AA5 2 LEU A 476 PRO A 478 -1 O LYS A 477 N GLN A 471
LINK SG CYS A 437 FE HEM A 501 1555 1555 2.29
LINK FE HEM A 501 N16 0I1 A 502 1555 1555 2.09
CRYST1 57.943 63.585 123.633 90.00 90.00 90.00 P 21 21 21 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.017258 0.000000 0.000000 0.00000
SCALE2 0.000000 0.015727 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008088 0.00000