HEADER HYDROLASE 09-JUN-21 7N6X TITLE CRYSTAL STRUCTURE OF HIV-1 PROTEASE MULTIPLE MUTANTS PRS17 BOUND TO TITLE 2 INHIBITOR AMPRENAVIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PR,RETROPEPSIN; COMPND 5 EC: 3.4.23.16; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 GROUP M SOURCE 3 SUBTYPE B (ISOLATE BRU/LAI); SOURCE 4 ORGANISM_COMMON: HIV-1; SOURCE 5 ORGANISM_TAXID: 11686; SOURCE 6 STRAIN: ISOLATE BRU/LAI; SOURCE 7 VARIANT: PRS17; SOURCE 8 GENE: GAG-POL; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 11 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PJ414 KEYWDS DRUG RESISTANCE, PRS17, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.H.BURNAMAN,Y.-F.WANG,I.T.WEBER REVDAT 2 18-OCT-23 7N6X 1 REMARK REVDAT 1 08-SEP-21 7N6X 0 JRNL AUTH S.H.BURNAMAN,D.W.KNELLER,Y.F.WANG,A.KOVALEVSKY,I.T.WEBER JRNL TITL REVERTANT MUTATION V48G ALTERS CONFORMATIONAL DYNAMICS OF JRNL TITL 2 HIGHLY DRUG RESISTANT HIV PROTEASE PRS17. JRNL REF J.MOL.GRAPH.MODEL. V. 108 08005 2021 JRNL REFN ISSN 1093-3263 JRNL PMID 34419931 JRNL DOI 10.1016/J.JMGM.2021.108005 REMARK 2 REMARK 2 RESOLUTION. 1.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 29585 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1569 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.47 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2116 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.3740 REMARK 3 BIN FREE R VALUE SET COUNT : 97 REMARK 3 BIN FREE R VALUE : 0.3760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1522 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 53 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.39000 REMARK 3 B22 (A**2) : 0.39000 REMARK 3 B33 (A**2) : -1.26000 REMARK 3 B12 (A**2) : 0.19000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.082 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.065 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.719 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1703 ; 0.018 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1750 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2339 ; 2.396 ; 1.647 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4033 ; 1.439 ; 1.576 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 218 ;15.005 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 69 ;40.990 ;21.884 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 296 ;13.373 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;20.966 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 241 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1894 ; 0.015 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 366 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): 25.6069 31.0544 -9.6995 REMARK 3 T TENSOR REMARK 3 T11: 0.0365 T22: 0.1021 REMARK 3 T33: 0.1444 T12: 0.0584 REMARK 3 T13: 0.0145 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 2.9854 L22: 0.5475 REMARK 3 L33: 0.8298 L12: -1.2210 REMARK 3 L13: -1.3149 L23: 0.4322 REMARK 3 S TENSOR REMARK 3 S11: 0.1558 S12: 0.3199 S13: 0.1201 REMARK 3 S21: -0.0439 S22: -0.0897 S23: -0.0655 REMARK 3 S31: -0.1146 S32: -0.2281 S33: -0.0662 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 99 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0918 37.6955 7.7032 REMARK 3 T TENSOR REMARK 3 T11: 0.0345 T22: 0.1007 REMARK 3 T33: 0.1405 T12: 0.0566 REMARK 3 T13: 0.0084 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 2.2300 L22: 1.2176 REMARK 3 L33: 0.6230 L12: -1.6244 REMARK 3 L13: -1.0182 L23: 0.8099 REMARK 3 S TENSOR REMARK 3 S11: -0.1332 S12: -0.2065 S13: 0.1225 REMARK 3 S21: 0.1262 S22: 0.1977 S23: -0.0666 REMARK 3 S31: 0.1215 S32: 0.2058 S33: -0.0644 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 201 B 201 REMARK 3 ORIGIN FOR THE GROUP (A): 22.1463 38.3379 -1.0343 REMARK 3 T TENSOR REMARK 3 T11: 0.0184 T22: 0.0290 REMARK 3 T33: 0.0504 T12: 0.0065 REMARK 3 T13: -0.0005 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 1.2697 L22: 0.7967 REMARK 3 L33: 9.1668 L12: -0.1399 REMARK 3 L13: -0.3856 L23: -1.9695 REMARK 3 S TENSOR REMARK 3 S11: -0.0459 S12: -0.0151 S13: 0.1521 REMARK 3 S21: -0.0031 S22: -0.0623 S23: -0.0809 REMARK 3 S31: 0.0104 S32: -0.0304 S33: 0.1082 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7N6X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1000257459. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 0.719.2 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 0.719.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31170 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.470 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : 8.20 REMARK 200 R MERGE FOR SHELL (I) : 1.12400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 5T2Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 37.5% TACSIMATE (HAMPTON RESEARCH), REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.56367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.12733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 41.34550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 68.90917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 13.78183 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 35 38.52 -95.53 REMARK 500 VAL A 48 139.95 66.39 REMARK 500 ASP B 35 38.34 -93.03 REMARK 500 ILE B 47 -46.64 -140.45 REMARK 500 VAL B 48 125.16 107.60 REMARK 500 VAL B 48 118.92 -162.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 34 ASP A 35 -149.48 REMARK 500 ILE B 47 VAL B 48 137.61 REMARK 500 ILE B 47 VAL B 48 -121.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6O54 RELATED DB: PDB REMARK 900 APO OF MULTIPLE MUTANTS PRS17 (D25N) REMARK 900 RELATED ID: 5T2E RELATED DB: PDB REMARK 900 APO OF MULTIPLE MUTANTS PRS17 REMARK 900 RELATED ID: 5T2Z RELATED DB: PDB REMARK 900 MULTIPLE MUTANTS PRS17 WITH DRV REMARK 900 RELATED ID: 6O5A RELATED DB: PDB REMARK 900 MULTIPLE MUTANTS PRS17 WITH SUBSTRATE P2/NC IN P61 REMARK 900 RELATED ID: 6O57 RELATED DB: PDB REMARK 900 MULTIPLE MUTANTS PRS17 WITH SUBSTRATE P2/NC IN P41 REMARK 900 RELATED ID: 6O5X RELATED DB: PDB REMARK 900 MULTIPLE MUTANTS PRS17 WITH SUBSTRATE CA/P2 DBREF 7N6X A 1 99 UNP P03367 POL_HV1BR 501 599 DBREF 7N6X B 1 99 UNP P03367 POL_HV1BR 501 599 SEQADV 7N6X LYS A 7 UNP P03367 GLN 507 ENGINEERED MUTATION SEQADV 7N6X ILE A 10 UNP P03367 LEU 510 ENGINEERED MUTATION SEQADV 7N6X ARG A 20 UNP P03367 LYS 520 ENGINEERED MUTATION SEQADV 7N6X ASP A 35 UNP P03367 GLU 535 ENGINEERED MUTATION SEQADV 7N6X ILE A 36 UNP P03367 MET 536 ENGINEERED MUTATION SEQADV 7N6X ASP A 37 UNP P03367 SER 537 ENGINEERED MUTATION SEQADV 7N6X LEU A 46 UNP P03367 MET 546 ENGINEERED MUTATION SEQADV 7N6X VAL A 48 UNP P03367 GLY 548 ENGINEERED MUTATION SEQADV 7N6X VAL A 54 UNP P03367 ILE 554 ENGINEERED MUTATION SEQADV 7N6X GLU A 60 UNP P03367 ASP 560 ENGINEERED MUTATION SEQADV 7N6X VAL A 62 UNP P03367 ILE 562 ENGINEERED MUTATION SEQADV 7N6X PRO A 63 UNP P03367 LEU 563 ENGINEERED MUTATION SEQADV 7N6X ALA A 67 UNP P03367 CYS 567 ENGINEERED MUTATION SEQADV 7N6X VAL A 71 UNP P03367 ALA 571 ENGINEERED MUTATION SEQADV 7N6X VAL A 72 UNP P03367 ILE 572 ENGINEERED MUTATION SEQADV 7N6X ILE A 77 UNP P03367 VAL 577 ENGINEERED MUTATION SEQADV 7N6X SER A 82 UNP P03367 VAL 582 ENGINEERED MUTATION SEQADV 7N6X MET A 90 UNP P03367 LEU 590 ENGINEERED MUTATION SEQADV 7N6X LEU A 93 UNP P03367 ILE 593 ENGINEERED MUTATION SEQADV 7N6X ALA A 95 UNP P03367 CYS 595 ENGINEERED MUTATION SEQADV 7N6X LYS B 7 UNP P03367 GLN 507 ENGINEERED MUTATION SEQADV 7N6X ILE B 10 UNP P03367 LEU 510 ENGINEERED MUTATION SEQADV 7N6X ARG B 20 UNP P03367 LYS 520 ENGINEERED MUTATION SEQADV 7N6X ASP B 35 UNP P03367 GLU 535 ENGINEERED MUTATION SEQADV 7N6X ILE B 36 UNP P03367 MET 536 ENGINEERED MUTATION SEQADV 7N6X ASP B 37 UNP P03367 SER 537 ENGINEERED MUTATION SEQADV 7N6X LEU B 46 UNP P03367 MET 546 ENGINEERED MUTATION SEQADV 7N6X VAL B 48 UNP P03367 GLY 548 ENGINEERED MUTATION SEQADV 7N6X VAL B 54 UNP P03367 ILE 554 ENGINEERED MUTATION SEQADV 7N6X GLU B 60 UNP P03367 ASP 560 ENGINEERED MUTATION SEQADV 7N6X VAL B 62 UNP P03367 ILE 562 ENGINEERED MUTATION SEQADV 7N6X PRO B 63 UNP P03367 LEU 563 ENGINEERED MUTATION SEQADV 7N6X ALA B 67 UNP P03367 CYS 567 ENGINEERED MUTATION SEQADV 7N6X VAL B 71 UNP P03367 ALA 571 ENGINEERED MUTATION SEQADV 7N6X VAL B 72 UNP P03367 ILE 572 ENGINEERED MUTATION SEQADV 7N6X ILE B 77 UNP P03367 VAL 577 ENGINEERED MUTATION SEQADV 7N6X SER B 82 UNP P03367 VAL 582 ENGINEERED MUTATION SEQADV 7N6X MET B 90 UNP P03367 LEU 590 ENGINEERED MUTATION SEQADV 7N6X LEU B 93 UNP P03367 ILE 593 ENGINEERED MUTATION SEQADV 7N6X ALA B 95 UNP P03367 CYS 595 ENGINEERED MUTATION SEQRES 1 A 99 PRO GLN ILE THR LEU TRP LYS ARG PRO ILE VAL THR ILE SEQRES 2 A 99 LYS ILE GLY GLY GLN LEU ARG GLU ALA LEU LEU ASP THR SEQRES 3 A 99 GLY ALA ASP ASP THR VAL LEU GLU ASP ILE ASP LEU PRO SEQRES 4 A 99 GLY ARG TRP LYS PRO LYS LEU ILE VAL GLY ILE GLY GLY SEQRES 5 A 99 PHE VAL LYS VAL ARG GLN TYR GLU GLN VAL PRO ILE GLU SEQRES 6 A 99 ILE ALA GLY HIS LYS VAL VAL GLY THR VAL LEU ILE GLY SEQRES 7 A 99 PRO THR PRO SER ASN ILE ILE GLY ARG ASN LEU MET THR SEQRES 8 A 99 GLN LEU GLY ALA THR LEU ASN PHE SEQRES 1 B 99 PRO GLN ILE THR LEU TRP LYS ARG PRO ILE VAL THR ILE SEQRES 2 B 99 LYS ILE GLY GLY GLN LEU ARG GLU ALA LEU LEU ASP THR SEQRES 3 B 99 GLY ALA ASP ASP THR VAL LEU GLU ASP ILE ASP LEU PRO SEQRES 4 B 99 GLY ARG TRP LYS PRO LYS LEU ILE VAL GLY ILE GLY GLY SEQRES 5 B 99 PHE VAL LYS VAL ARG GLN TYR GLU GLN VAL PRO ILE GLU SEQRES 6 B 99 ILE ALA GLY HIS LYS VAL VAL GLY THR VAL LEU ILE GLY SEQRES 7 B 99 PRO THR PRO SER ASN ILE ILE GLY ARG ASN LEU MET THR SEQRES 8 B 99 GLN LEU GLY ALA THR LEU ASN PHE HET 478 B 201 70 HETNAM 478 {3-[(4-AMINO-BENZENESULFONYL)-ISOBUTYL-AMINO]-1-BENZYL- HETNAM 2 478 2-HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL HETNAM 3 478 ESTER HETSYN 478 AMPRENAVIR FORMUL 3 478 C25 H35 N3 O6 S FORMUL 4 HOH *53(H2 O) HELIX 1 AA1 GLY A 86 THR A 91 1 6 HELIX 2 AA2 GLN A 92 GLY A 94 5 3 HELIX 3 AA3 GLY B 86 THR B 91 1 6 HELIX 4 AA4 GLN B 92 GLY B 94 5 3 SHEET 1 AA1 4 GLN A 2 ILE A 3 0 SHEET 2 AA1 4 THR B 96 ASN B 98 -1 O LEU B 97 N ILE A 3 SHEET 3 AA1 4 THR A 96 ASN A 98 -1 N THR A 96 O ASN B 98 SHEET 4 AA1 4 GLN B 2 ILE B 3 -1 O ILE B 3 N LEU A 97 SHEET 1 AA2 8 LYS A 43 GLY A 49 0 SHEET 2 AA2 8 GLY A 52 ILE A 66 -1 O GLN A 58 N LYS A 43 SHEET 3 AA2 8 HIS A 69 ILE A 77 -1 O ILE A 77 N ARG A 57 SHEET 4 AA2 8 VAL A 32 LEU A 33 1 N LEU A 33 O LEU A 76 SHEET 5 AA2 8 ILE A 84 ILE A 85 -1 O ILE A 84 N VAL A 32 SHEET 6 AA2 8 GLN A 18 LEU A 24 1 N LEU A 23 O ILE A 85 SHEET 7 AA2 8 ILE A 10 ILE A 15 -1 N ILE A 13 O ARG A 20 SHEET 8 AA2 8 GLY A 52 ILE A 66 -1 O GLU A 65 N LYS A 14 SHEET 1 AA3 8 LYS B 43 LEU B 46 0 SHEET 2 AA3 8 LYS B 55 ILE B 66 -1 O VAL B 56 N LYS B 45 SHEET 3 AA3 8 HIS B 69 ILE B 77 -1 O ILE B 77 N ARG B 57 SHEET 4 AA3 8 VAL B 32 LEU B 33 1 N LEU B 33 O LEU B 76 SHEET 5 AA3 8 ILE B 84 ILE B 85 -1 O ILE B 84 N VAL B 32 SHEET 6 AA3 8 GLN B 18 LEU B 24 1 N LEU B 23 O ILE B 85 SHEET 7 AA3 8 ILE B 10 ILE B 15 -1 N ILE B 13 O ARG B 20 SHEET 8 AA3 8 LYS B 55 ILE B 66 -1 O GLU B 65 N LYS B 14 CRYST1 62.994 62.994 82.691 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015875 0.009165 0.000000 0.00000 SCALE2 0.000000 0.018330 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012093 0.00000