data_7NBP # _entry.id 7NBP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.394 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7NBP pdb_00007nbp 10.2210/pdb7nbp/pdb WWPDB D_1292113669 ? ? BMRB 34596 ? 10.13018/BMR34596 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-03-02 2 'Structure model' 1 1 2022-03-16 3 'Structure model' 1 2 2022-04-20 4 'Structure model' 1 3 2024-06-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.pdbx_database_id_PubMed' 2 2 'Structure model' '_citation.title' 3 3 'Structure model' '_citation.journal_volume' 4 3 'Structure model' '_citation.page_first' 5 3 'Structure model' '_citation.page_last' 6 4 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7NBP _pdbx_database_status.recvd_initial_deposition_date 2021-01-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details ;Solution structure of DNA duplex containing a 7,8-dihydro-8-oxo-1,N6-ethenoadenine base modification that induces exclusively A->T transversions in Escherichia coli ; _pdbx_database_related.db_id 34596 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Aralov, A.V.' 1 ? 'Gubina, N.' 2 ? 'Cabrero, C.' 3 ? 'Tsvetkov, V.B.' 4 ? 'Turaev, A.V.' 5 ? 'Fedeles, B.I.' 6 ? 'Croy, R.G.' 7 ? 'Isaakova, E.A.' 8 ? 'Melnik, D.' 9 ? 'Dukova, S.' 10 ? 'Khrulev, A.A.' 11 ? 'Varizhuk, A.M.' 12 ? 'Gonzalez, C.' 13 ? 'Zatsepin, T.S.' 14 ? 'Essigmann, J.M.' 15 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 50 _citation.language ? _citation.page_first 3056 _citation.page_last 3069 _citation.title ;7,8-Dihydro-8-oxo-1,N6-ethenoadenine: an exclusively Hoogsteen-paired thymine mimic in DNA that induces A→T transversions in Escherichia coli. ; _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkac148 _citation.pdbx_database_id_PubMed 35234900 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Aralov, A.V.' 1 ? primary 'Gubina, N.' 2 ? primary 'Cabrero, C.' 3 ? primary 'Tsvetkov, V.B.' 4 ? primary 'Turaev, A.V.' 5 ? primary 'Fedeles, B.I.' 6 ? primary 'Croy, R.G.' 7 ? primary 'Isaakova, E.A.' 8 ? primary 'Melnik, D.' 9 ? primary 'Dukova, S.' 10 ? primary 'Ryazantsev, D.Y.' 11 ? primary 'Khrulev, A.A.' 12 ? primary 'Varizhuk, A.M.' 13 ? primary 'Gonzalez, C.' 14 ? primary 'Zatsepin, T.S.' 15 ? primary 'Essigmann, J.M.' 16 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*TP*AP*CP*(EDA)P*CP*AP*TP*G)-3') ; 2763.845 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*AP*TP*GP*AP*GP*TP*AP*C)-3') ; 2739.824 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DG)(DT)(DA)(DC)(U7T)(DC)(DA)(DT)(DG)' GTACXCATG A ? 2 polydeoxyribonucleotide no no '(DC)(DA)(DT)(DG)(DA)(DG)(DT)(DA)(DC)' CATGAGTAC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DT n 1 3 DA n 1 4 DC n 1 5 U7T n 1 6 DC n 1 7 DA n 1 8 DT n 1 9 DG n 2 1 DC n 2 2 DA n 2 3 DT n 2 4 DG n 2 5 DA n 2 6 DG n 2 7 DT n 2 8 DA n 2 9 DC n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 9 'synthetic construct' ? 32630 ? 2 1 sample 1 9 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 U7T non-polymer . '[(2~{R},3~{S},5~{R})-3-oxidanyl-5-(2-oxidanylidene-1~{H}-imidazo[2,1-f]purin-3-yl)oxolan-2-yl]methyl dihydrogen phosphite' 7,8-dihydro-8-oxo-1,N6-ethenoadenine 'C12 H14 N5 O6 P' 355.243 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 DA 3 3 3 DA DA A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 U7T 5 5 5 U7T EDA A . n A 1 6 DC 6 6 6 DC DC A . n A 1 7 DA 7 7 7 DA DA A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DG 9 9 9 DG DG A . n B 2 1 DC 1 10 10 DC DC B . n B 2 2 DA 2 11 11 DA DA B . n B 2 3 DT 3 12 12 DT DT B . n B 2 4 DG 4 13 13 DG DG B . n B 2 5 DA 5 14 14 DA DA B . n B 2 6 DG 6 15 15 DG DG B . n B 2 7 DT 7 16 16 DT DT B . n B 2 8 DA 8 17 17 DA DA B . n B 2 9 DC 9 18 18 DC DC B . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7NBP _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7NBP _struct.title ;Solution structure of DNA duplex containing a 7,8-dihydro-8-oxo-1,N6-ethenoadenine base modification that induces exclusively A->T transversions in Escherichia coli ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7NBP _struct_keywords.text 'Modified DNA, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7NBP 7NBP ? 1 ? 1 2 PDB 7NBP 7NBP ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7NBP A 1 ? 9 ? 7NBP 1 ? 9 ? 1 9 2 2 7NBP B 1 ? 9 ? 7NBP 10 ? 18 ? 10 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 840 ? 1 MORE -2 ? 1 'SSA (A^2)' 3590 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A DC 4 "O3'" ? ? ? 1_555 A U7T 5 P ? ? A DC 4 A U7T 5 1_555 ? ? ? ? ? ? ? 1.616 ? ? covale2 covale one ? A U7T 5 "O3'" ? ? ? 1_555 A DC 6 P ? ? A U7T 5 A DC 6 1_555 ? ? ? ? ? ? ? 1.616 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 1 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 1 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 1 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 2 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 2 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 7 N3 ? ? A DA 3 B DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 7 O4 ? ? A DA 3 B DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 4 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 4 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 4 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 6 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 6 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 6 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 7 B DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 7 B DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 2 N1 ? ? A DT 8 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 2 N6 ? ? A DT 8 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 9 B DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 9 B DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 9 B DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.22 108.30 1.92 0.30 N 2 1 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.89 108.30 2.59 0.30 N 3 1 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 114.71 118.60 -3.89 0.60 N 4 1 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.97 108.30 2.67 0.30 N 5 1 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.56 108.30 2.26 0.30 N 6 1 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.34 108.30 2.04 0.30 N 7 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.58 108.30 3.28 0.30 N 8 1 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.12 108.30 1.82 0.30 N 9 1 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 110.96 108.30 2.66 0.30 N 10 1 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.59 108.30 2.29 0.30 N 11 1 C5 B DA 14 ? ? C6 B DA 14 ? ? N1 B DA 14 ? ? 121.28 117.70 3.58 0.50 N 12 1 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 110.47 108.30 2.17 0.30 N 13 1 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.56 108.30 3.26 0.30 N 14 2 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.47 108.30 2.17 0.30 N 15 2 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 114.75 118.60 -3.85 0.60 N 16 2 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.43 108.30 3.13 0.30 N 17 2 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 114.82 118.60 -3.78 0.60 N 18 2 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.48 108.30 2.18 0.30 N 19 2 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.40 122.90 -4.50 0.60 N 20 2 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.66 108.30 4.36 0.30 N 21 2 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.64 108.30 2.34 0.30 N 22 2 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 110.51 108.30 2.21 0.30 N 23 2 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 111.56 108.30 3.26 0.30 N 24 2 "O4'" B DA 14 ? ? "C1'" B DA 14 ? ? N9 B DA 14 ? ? 110.57 108.30 2.27 0.30 N 25 2 C5 B DA 14 ? ? C6 B DA 14 ? ? N1 B DA 14 ? ? 121.03 117.70 3.33 0.50 N 26 2 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 110.18 108.30 1.88 0.30 N 27 2 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 110.34 108.30 2.04 0.30 N 28 2 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 120.90 117.70 3.20 0.50 N 29 2 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.58 108.30 2.28 0.30 N 30 3 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.23 108.30 2.93 0.30 N 31 3 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 114.65 118.60 -3.95 0.60 N 32 3 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 112.67 108.30 4.37 0.30 N 33 3 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.50 108.30 2.20 0.30 N 34 3 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.66 121.90 -4.24 0.70 N 35 3 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 114.96 118.60 -3.64 0.60 N 36 3 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.62 108.30 4.32 0.30 N 37 3 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.41 108.30 2.11 0.30 N 38 3 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 119.21 122.90 -3.69 0.60 N 39 3 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 112.17 108.30 3.87 0.30 N 40 3 "O4'" B DA 14 ? ? "C1'" B DA 14 ? ? N9 B DA 14 ? ? 110.50 108.30 2.20 0.30 N 41 3 C4 B DA 14 ? ? C5 B DA 14 ? ? C6 B DA 14 ? ? 113.88 117.00 -3.12 0.50 N 42 3 C5 B DA 14 ? ? C6 B DA 14 ? ? N1 B DA 14 ? ? 121.21 117.70 3.51 0.50 N 43 3 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 110.82 108.30 2.52 0.30 N 44 3 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 111.07 108.30 2.77 0.30 N 45 3 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.95 108.30 2.65 0.30 N 46 4 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.15 108.30 2.85 0.30 N 47 4 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 119.14 122.90 -3.76 0.60 N 48 4 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.24 108.30 1.94 0.30 N 49 4 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.83 108.30 2.53 0.30 N 50 4 N3 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 117.53 121.90 -4.37 0.70 N 51 4 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.35 108.30 2.05 0.30 N 52 4 N3 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 117.64 121.90 -4.26 0.70 N 53 4 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.53 108.30 2.23 0.30 N 54 4 "O4'" B DA 14 ? ? "C1'" B DA 14 ? ? N9 B DA 14 ? ? 110.78 108.30 2.48 0.30 N 55 4 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 114.83 118.60 -3.77 0.60 N 56 4 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.71 108.30 3.41 0.30 N 57 4 N3 B DC 18 ? ? C2 B DC 18 ? ? O2 B DC 18 ? ? 117.69 121.90 -4.21 0.70 N 58 5 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.53 108.30 3.23 0.30 N 59 5 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.66 108.30 3.36 0.30 N 60 5 C6 A DT 2 ? ? C5 A DT 2 ? ? C7 A DT 2 ? ? 118.17 122.90 -4.73 0.60 N 61 5 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.39 108.30 3.09 0.30 N 62 5 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 111.68 108.30 3.38 0.30 N 63 5 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 118.15 122.90 -4.75 0.60 N 64 5 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 115.38 108.30 7.08 0.30 N 65 5 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.94 108.30 2.64 0.30 N 66 5 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 111.18 108.30 2.88 0.30 N 67 5 C5 B DA 14 ? ? C6 B DA 14 ? ? N1 B DA 14 ? ? 120.90 117.70 3.20 0.50 N 68 5 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 111.87 108.30 3.57 0.30 N 69 5 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 110.82 108.30 2.52 0.30 N 70 5 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 111.11 108.30 2.81 0.30 N 71 6 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.60 108.30 2.30 0.30 N 72 6 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 114.71 118.60 -3.89 0.60 N 73 6 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 111.21 108.30 2.91 0.30 N 74 6 C5 A DA 7 ? ? C6 A DA 7 ? ? N1 A DA 7 ? ? 120.81 117.70 3.11 0.50 N 75 6 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.64 108.30 4.34 0.30 N 76 6 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.31 108.30 2.01 0.30 N 77 6 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 111.01 108.30 2.71 0.30 N 78 6 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 119.16 122.90 -3.74 0.60 N 79 6 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.47 108.30 2.17 0.30 N 80 6 "O4'" B DA 14 ? ? "C1'" B DA 14 ? ? N9 B DA 14 ? ? 110.18 108.30 1.88 0.30 N 81 6 C5 B DA 14 ? ? C6 B DA 14 ? ? N1 B DA 14 ? ? 120.84 117.70 3.14 0.50 N 82 6 N1 B DA 14 ? ? C6 B DA 14 ? ? N6 B DA 14 ? ? 114.90 118.60 -3.70 0.60 N 83 6 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 111.28 108.30 2.98 0.30 N 84 6 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 111.02 108.30 2.72 0.30 N 85 6 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 112.06 108.30 3.76 0.30 N 86 7 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 111.10 108.30 2.80 0.30 N 87 7 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 120.75 117.70 3.05 0.50 N 88 7 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.57 108.30 2.27 0.30 N 89 7 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.26 108.30 1.96 0.30 N 90 7 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.01 122.90 -3.89 0.60 N 91 7 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.41 108.30 4.11 0.30 N 92 7 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.14 108.30 1.84 0.30 N 93 7 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 110.43 108.30 2.13 0.30 N 94 7 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 118.09 122.90 -4.81 0.60 N 95 7 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 110.36 108.30 2.06 0.30 N 96 7 C5 B DA 14 ? ? C6 B DA 14 ? ? N1 B DA 14 ? ? 121.07 117.70 3.37 0.50 N 97 7 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 110.40 108.30 2.10 0.30 N 98 7 "O4'" B DT 16 ? ? "C1'" B DT 16 ? ? N1 B DT 16 ? ? 110.25 108.30 1.95 0.30 N 99 7 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 111.07 108.30 2.77 0.30 N 100 7 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.70 108.30 2.40 0.30 N 101 8 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.70 108.30 2.40 0.30 N 102 8 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 114.85 118.60 -3.75 0.60 N 103 8 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.47 108.30 2.17 0.30 N 104 8 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.60 108.30 2.30 0.30 N 105 8 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.88 108.30 4.58 0.30 N 106 8 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.56 108.30 2.26 0.30 N 107 8 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 110.52 108.30 2.22 0.30 N 108 8 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 118.47 122.90 -4.43 0.60 N 109 8 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 113.73 108.30 5.43 0.30 N 110 8 "O4'" B DA 14 ? ? "C1'" B DA 14 ? ? N9 B DA 14 ? ? 110.83 108.30 2.53 0.30 N 111 8 C5 B DA 14 ? ? C6 B DA 14 ? ? N1 B DA 14 ? ? 121.29 117.70 3.59 0.50 N 112 8 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 111.29 108.30 2.99 0.30 N 113 8 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 110.53 108.30 2.23 0.30 N 114 8 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.13 117.70 3.43 0.50 N 115 8 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.53 108.30 2.23 0.30 N 116 9 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.51 108.30 2.21 0.30 N 117 9 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.68 108.30 2.38 0.30 N 118 9 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 113.31 108.30 5.01 0.30 N 119 9 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.16 108.30 3.86 0.30 N 120 9 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 111.65 108.30 3.35 0.30 N 121 9 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 110.63 108.30 2.33 0.30 N 122 9 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 119.23 122.90 -3.67 0.60 N 123 9 C5 B DA 14 ? ? C6 B DA 14 ? ? N1 B DA 14 ? ? 121.14 117.70 3.44 0.50 N 124 9 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 110.36 108.30 2.06 0.30 N 125 9 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 110.73 108.30 2.43 0.30 N 126 9 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.40 108.30 2.10 0.30 N 127 10 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.26 108.30 1.96 0.30 N 128 10 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 114.79 118.60 -3.81 0.60 N 129 10 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.33 108.30 2.03 0.30 N 130 10 "O4'" A DC 6 ? ? "C1'" A DC 6 ? ? N1 A DC 6 ? ? 110.35 108.30 2.05 0.30 N 131 10 "O4'" A DT 8 ? ? "C1'" A DT 8 ? ? N1 A DT 8 ? ? 110.12 108.30 1.82 0.30 N 132 10 C6 A DT 8 ? ? C5 A DT 8 ? ? C7 A DT 8 ? ? 119.11 122.90 -3.79 0.60 N 133 10 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.93 108.30 3.63 0.30 N 134 10 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 111.26 108.30 2.96 0.30 N 135 10 N1 B DA 11 ? ? C6 B DA 11 ? ? N6 B DA 11 ? ? 114.93 118.60 -3.67 0.60 N 136 10 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 110.38 108.30 2.08 0.30 N 137 10 "O4'" B DG 13 ? ? "C1'" B DG 13 ? ? N9 B DG 13 ? ? 113.33 108.30 5.03 0.30 N 138 10 "O4'" B DA 14 ? ? "C1'" B DA 14 ? ? N9 B DA 14 ? ? 110.56 108.30 2.26 0.30 N 139 10 C5 B DA 14 ? ? C6 B DA 14 ? ? N1 B DA 14 ? ? 121.31 117.70 3.61 0.50 N 140 10 C6 B DT 16 ? ? C5 B DT 16 ? ? C7 B DT 16 ? ? 119.13 122.90 -3.77 0.60 N 141 10 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 110.75 108.30 2.45 0.30 N 142 10 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 112.08 108.30 3.78 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA A 3 ? ? 0.053 'SIDE CHAIN' 2 1 DC A 4 ? ? 0.063 'SIDE CHAIN' 3 1 DA B 11 ? ? 0.063 'SIDE CHAIN' 4 2 DC A 4 ? ? 0.065 'SIDE CHAIN' 5 2 DA B 11 ? ? 0.066 'SIDE CHAIN' 6 3 DA A 3 ? ? 0.068 'SIDE CHAIN' 7 4 DA A 3 ? ? 0.069 'SIDE CHAIN' 8 6 DC A 4 ? ? 0.069 'SIDE CHAIN' 9 6 DA B 11 ? ? 0.055 'SIDE CHAIN' 10 7 DA A 3 ? ? 0.053 'SIDE CHAIN' 11 7 DA B 17 ? ? 0.058 'SIDE CHAIN' 12 10 DC A 4 ? ? 0.077 'SIDE CHAIN' # _pdbx_entry_details.entry_id 7NBP _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # _pdbx_nmr_ensemble.entry_id 7NBP _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7NBP _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'fewest violations' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;0.5 M DNA (5'-D(*GP*TP*AP*CP*(EDA)P*CP*AP*TP*G)-3'), 0.5 M DNA (5'-D(*CP*AP*TP*GP*AP*GP*TP*AP*C)-3'), 25 mM sodium phosphate, 100 mM sodium chloride, 0.5 % v/v DSS, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 'Sample 1' _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 ;DNA (5'-D(*GP*TP*AP*CP*(EDA)P*CP*AP*TP*G)-3') ; 0.5 ? M 'natural abundance' 1 ;DNA (5'-D(*CP*AP*TP*GP*AP*GP*TP*AP*C)-3') ; 0.5 ? M 'natural abundance' 1 'sodium phosphate' 25 ? mM 'natural abundance' 1 'sodium chloride' 100 ? mM 'natural abundance' 1 DSS 0.5 ? '% v/v' 'natural abundance' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 276 atm 1 7 125 ? ? mM T3 ? pH ? ? K 2 278 atm 1 7 125 ? ? mM T5 ? pH ? ? K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H NOESY' 1 isotropic 2 1 1 '2D 1H-1H TOCSY' 1 isotropic 3 2 1 '2D 1H-1H NOESY' 1 isotropic # _pdbx_nmr_refine.entry_id 7NBP _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 5 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection TopSpin ? 'Bruker Biospin' 2 processing TopSpin ? 'Bruker Biospin' 3 'chemical shift assignment' NMRFAM-SPARKY ? 'Goddard & Kneller' 4 'structure calculation' Amber 18 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 5 refinement Amber 18 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 6 'data analysis' MOLMOL ? 'Koradi, Billeter and Wuthrich' 7 'data analysis' 3DNA ? 'Lu & Olson' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 U7T P P N N 144 U7T OP1 O N N 145 U7T OP2 O N N 146 U7T "O5'" O N N 147 U7T C4 C Y N 148 U7T N3 N Y N 149 U7T C2 C Y N 150 U7T N1 N N N 151 U7T C6 C Y N 152 U7T C5 C Y N 153 U7T "C2'" C N N 154 U7T "C5'" C N N 155 U7T "C4'" C N R 156 U7T "O4'" O N N 157 U7T "C1'" C N R 158 U7T "C3'" C N S 159 U7T "O3'" O N N 160 U7T C1 C Y N 161 U7T N2 N Y N 162 U7T C3 C Y N 163 U7T N4 N Y N 164 U7T O4 O N N 165 U7T N5 N N N 166 U7T C7 C N N 167 U7T H1 H N N 168 U7T H3 H N N 169 U7T H5 H N N 170 U7T H4 H N N 171 U7T H6 H N N 172 U7T "H2'" H N N 173 U7T "H2''" H N N 174 U7T "H5''" H N N 175 U7T "H5'" H N N 176 U7T "H4'" H N N 177 U7T "H1'" H N N 178 U7T "H3'" H N N 179 U7T H7 H N N 180 U7T H2 H N N 181 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 U7T C5 N4 sing Y N 150 U7T C5 C4 doub Y N 151 U7T N4 C3 doub Y N 152 U7T C4 N3 sing Y N 153 U7T C3 C6 sing Y N 154 U7T C3 N3 sing Y N 155 U7T N5 C6 sing N N 156 U7T N5 C7 sing N N 157 U7T C6 C1 doub Y N 158 U7T N3 C2 sing Y N 159 U7T O4 C7 doub N N 160 U7T C7 N1 sing N N 161 U7T C1 N1 sing N N 162 U7T C1 N2 sing Y N 163 U7T C2 N2 doub Y N 164 U7T N1 "C1'" sing N N 165 U7T "O4'" "C1'" sing N N 166 U7T "O4'" "C4'" sing N N 167 U7T "C5'" "C4'" sing N N 168 U7T "C5'" "O5'" sing N N 169 U7T "C1'" "C2'" sing N N 170 U7T P "O5'" sing N N 171 U7T P OP1 sing N N 172 U7T P OP2 sing N N 173 U7T "C4'" "C3'" sing N N 174 U7T "C2'" "C3'" sing N N 175 U7T "C3'" "O3'" sing N N 176 U7T OP1 H1 sing N N 177 U7T OP2 H3 sing N N 178 U7T C4 H5 sing N N 179 U7T C2 H4 sing N N 180 U7T C5 H6 sing N N 181 U7T "C2'" "H2'" sing N N 182 U7T "C2'" "H2''" sing N N 183 U7T "C5'" "H5''" sing N N 184 U7T "C5'" "H5'" sing N N 185 U7T "C4'" "H4'" sing N N 186 U7T "C1'" "H1'" sing N N 187 U7T "C3'" "H3'" sing N N 188 U7T "O3'" H7 sing N N 189 U7T N5 H2 sing N N 190 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7NBP 'double helix' 7NBP 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 9 1_555 -0.462 -0.184 0.463 13.437 -0.889 0.498 1 A_DG1:DC18_B A 1 ? B 18 ? 19 1 1 A DT 2 1_555 B DA 8 1_555 -0.213 -0.073 -0.113 12.138 -12.351 -2.877 2 A_DT2:DA17_B A 2 ? B 17 ? 20 1 1 A DA 3 1_555 B DT 7 1_555 0.128 -0.101 -0.023 -3.877 -7.649 0.020 3 A_DA3:DT16_B A 3 ? B 16 ? 20 1 1 A DC 4 1_555 B DG 6 1_555 0.332 -0.155 -0.024 2.051 -4.594 1.122 4 A_DC4:DG15_B A 4 ? B 15 ? 19 1 1 A DC 6 1_555 B DG 4 1_555 0.261 -0.168 0.044 3.550 -15.189 0.395 5 A_DC6:DG13_B A 6 ? B 13 ? 19 1 1 A DA 7 1_555 B DT 3 1_555 0.006 -0.116 0.180 7.373 -8.903 -2.746 6 A_DA7:DT12_B A 7 ? B 12 ? 20 1 1 A DT 8 1_555 B DA 2 1_555 -0.006 -0.115 -0.144 4.972 -9.420 0.809 7 A_DT8:DA11_B A 8 ? B 11 ? 20 1 1 A DG 9 1_555 B DC 1 1_555 -0.300 -0.156 -0.031 -19.190 -12.545 -1.142 8 A_DG9:DC10_B A 9 ? B 10 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 9 1_555 A DT 2 1_555 B DA 8 1_555 -0.205 -0.857 3.408 4.204 -0.066 31.366 -1.560 1.182 3.355 -0.122 -7.731 31.639 1 AA_DG1DT2:DA17DC18_BB A 1 ? B 18 ? A 2 ? B 17 ? 1 A DT 2 1_555 B DA 8 1_555 A DA 3 1_555 B DT 7 1_555 0.012 -0.947 3.549 -1.336 4.630 37.927 -2.068 -0.198 3.412 7.089 2.046 38.221 2 AA_DT2DA3:DT16DA17_BB A 2 ? B 17 ? A 3 ? B 16 ? 1 A DA 3 1_555 B DT 7 1_555 A DC 4 1_555 B DG 6 1_555 0.232 -0.636 3.170 -1.482 -0.098 34.688 -1.052 -0.608 3.160 -0.165 2.485 34.719 3 AA_DA3DC4:DG15DT16_BB A 3 ? B 16 ? A 4 ? B 15 ? 1 A DC 4 1_555 B DG 6 1_555 A DC 6 1_555 B DG 4 1_555 -0.611 -0.385 6.396 -1.349 7.558 68.259 -0.889 0.444 6.338 6.713 1.198 68.638 4 AA_DC4DC6:DG13DG15_BB A 4 ? B 15 ? A 6 ? B 13 ? 1 A DC 6 1_555 B DG 4 1_555 A DA 7 1_555 B DT 3 1_555 -0.517 -0.723 3.071 -2.515 13.130 29.499 -3.397 0.526 2.561 24.277 4.650 32.325 5 AA_DC6DA7:DT12DG13_BB A 6 ? B 13 ? A 7 ? B 12 ? 1 A DA 7 1_555 B DT 3 1_555 A DT 8 1_555 B DA 2 1_555 0.186 -0.947 3.295 2.750 -1.076 31.807 -1.523 0.168 3.329 -1.958 -5.004 31.940 6 AA_DA7DT8:DA11DT12_BB A 7 ? B 12 ? A 8 ? B 11 ? 1 A DT 8 1_555 B DA 2 1_555 A DG 9 1_555 B DC 1 1_555 0.336 -1.208 3.663 1.238 8.623 38.117 -2.932 -0.341 3.331 12.997 -1.867 39.064 7 AA_DT8DG9:DC10DA11_BB A 8 ? B 11 ? A 9 ? B 10 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Spanish Ministry of Science, Innovation, and Universities' Spain BFU2017-89707-P 1 'Spanish Ministry of Science, Innovation, and Universities' Spain PRE2018-083173 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id U7T _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id U7T _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _atom_sites.entry_id 7NBP _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P # loop_