HEADER DNA BINDING PROTEIN 02-FEB-21 7NDY TITLE DI-PHOSPHORYLATED BARRIER-TO-AUTOINTEGRATION FACTOR (BAF) IN COMPLEX TITLE 2 WITH LEM DOMAIN OF EMERIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: BARRIER-TO-AUTOINTEGRATION FACTOR, N-TERMINALLY PROCESSED; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: EMERIN; COMPND 7 CHAIN: G; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BANF1, BAF, BCRG1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: EMD, EDMD, STA; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PHOSPHORYLATION COMPLEX HIGH RESOLUTION, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.MARCELOT,M.H.LE DU,G.HOFFMANN,S.ZINN-JUSTIN REVDAT 3 31-JAN-24 7NDY 1 REMARK REVDAT 2 28-APR-21 7NDY 1 JRNL REVDAT 1 07-APR-21 7NDY 0 JRNL AUTH A.MARCELOT,A.PETITALOT,V.ROPARS,M.H.LE DU,C.SAMSON,S.DUBOIS, JRNL AUTH 2 G.HOFFMANN,S.MIRON,P.CUNIASSE,J.A.MARQUEZ,R.THAI, JRNL AUTH 3 F.X.THEILLET,S.ZINN-JUSTIN JRNL TITL DI-PHOSPHORYLATED BAF SHOWS ALTERED STRUCTURAL DYNAMICS AND JRNL TITL 2 BINDING TO DNA, BUT INTERACTS WITH ITS NUCLEAR ENVELOPE JRNL TITL 3 PARTNERS. JRNL REF NUCLEIC ACIDS RES. V. 49 3841 2021 JRNL REFN ESSN 1362-4962 JRNL PMID 33744941 JRNL DOI 10.1093/NAR/GKAB184 REMARK 2 REMARK 2 RESOLUTION. 1.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 57.2 REMARK 3 NUMBER OF REFLECTIONS : 20430 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 983 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.56 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 5.69 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2196 REMARK 3 BIN FREE R VALUE : 0.2947 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 25 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1749 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 208 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.81250 REMARK 3 B22 (A**2) : -0.65270 REMARK 3 B33 (A**2) : 2.46520 REMARK 3 B12 (A**2) : -1.45340 REMARK 3 B13 (A**2) : 0.98650 REMARK 3 B23 (A**2) : -0.32110 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.220 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.130 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.124 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.126 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.122 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1840 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2489 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 670 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 320 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1840 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 219 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2077 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.87 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.08 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.58 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 2.3492 -16.6061 -16.5982 REMARK 3 T TENSOR REMARK 3 T11: -0.0201 T22: -0.0247 REMARK 3 T33: 0.0169 T12: -0.0172 REMARK 3 T13: 0.0126 T23: -0.001 REMARK 3 L TENSOR REMARK 3 L11: 0.491 L22: 0.7886 REMARK 3 L33: 0.3216 L12: 0.1572 REMARK 3 L13: 0.2915 L23: -0.1596 REMARK 3 S TENSOR REMARK 3 S11: 0.0357 S12: 0.0087 S13: 0.015 REMARK 3 S21: 0.0087 S22: -0.0404 S23: -0.0118 REMARK 3 S31: 0.015 S32: -0.0118 S33: 0.0047 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 10.0107 1.2639 -28.8454 REMARK 3 T TENSOR REMARK 3 T11: -0.0342 T22: -0.0291 REMARK 3 T33: 0.0194 T12: -0.0082 REMARK 3 T13: 0.0262 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.9691 L22: 0.5929 REMARK 3 L33: 0.4564 L12: -0.1972 REMARK 3 L13: 0.0955 L23: 0.229 REMARK 3 S TENSOR REMARK 3 S11: 0.0624 S12: 0.0051 S13: 0.0136 REMARK 3 S21: 0.0051 S22: -0.0621 S23: 0.0078 REMARK 3 S31: 0.0136 S32: 0.0078 S33: -0.0003 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { G|* } REMARK 3 ORIGIN FOR THE GROUP (A): 18.1529 -0.2069 -7.0399 REMARK 3 T TENSOR REMARK 3 T11: -0.02 T22: -0.0288 REMARK 3 T33: -0.0018 T12: 0.0067 REMARK 3 T13: -0.0149 T23: 0.005 REMARK 3 L TENSOR REMARK 3 L11: 0.4406 L22: 1.7398 REMARK 3 L33: 2.2397 L12: 0.0054 REMARK 3 L13: 0.2021 L23: 0.6811 REMARK 3 S TENSOR REMARK 3 S11: -0.0677 S12: 0.0229 S13: -0.0622 REMARK 3 S21: 0.0229 S22: 0.0186 S23: 0.0556 REMARK 3 S31: -0.0622 S32: 0.0556 S33: 0.0491 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7NDY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1292113796. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-20 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87313 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32449 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.242 REMARK 200 RESOLUTION RANGE LOW (A) : 33.225 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.8 REMARK 200 DATA REDUNDANCY : 15.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.24 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.41 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.80200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6GHD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES SODIUM SALT 0.1 M PH 7.5 PEG 600 REMARK 280 25% W/V, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 GLY B 1 REMARK 465 GLY G 1 REMARK 465 ASP G 2 REMARK 465 ARG G 45 REMARK 465 ARG G 46 REMARK 465 ARG G 47 REMARK 465 LEU G 48 REMARK 465 SER G 49 REMARK 465 PRO G 50 REMARK 465 PRO G 51 REMARK 465 SER G 52 REMARK 465 SER G 53 REMARK 465 SER G 54 REMARK 465 ALA G 55 REMARK 465 ALA G 56 REMARK 465 SER G 57 REMARK 465 SER G 58 REMARK 465 TYR G 59 REMARK 465 SER G 60 REMARK 465 PHE G 61 REMARK 465 SER G 62 REMARK 465 ASP G 63 REMARK 465 LEU G 64 REMARK 465 ASN G 65 REMARK 465 SER G 66 REMARK 465 THR G 67 REMARK 465 ARG G 68 REMARK 465 GLY G 69 REMARK 465 ASP G 70 REMARK 465 ALA G 71 REMARK 465 ASP G 72 REMARK 465 MET G 73 REMARK 465 TYR G 74 REMARK 465 ASP G 75 REMARK 465 LEU G 76 REMARK 465 PRO G 77 REMARK 465 LYS G 78 REMARK 465 LYS G 79 REMARK 465 GLU G 80 REMARK 465 ASP G 81 REMARK 465 ALA G 82 REMARK 465 LEU G 83 REMARK 465 LEU G 84 REMARK 465 TYR G 85 REMARK 465 GLN G 86 REMARK 465 SER G 87 REMARK 465 LYS G 88 REMARK 465 GLY G 89 REMARK 465 TYR G 90 REMARK 465 ASN G 91 REMARK 465 ASP G 92 REMARK 465 ASP G 93 REMARK 465 TYR G 94 REMARK 465 TYR G 95 REMARK 465 GLU G 96 REMARK 465 GLU G 97 REMARK 465 SER G 98 REMARK 465 TYR G 99 REMARK 465 PHE G 100 REMARK 465 THR G 101 REMARK 465 THR G 102 REMARK 465 ARG G 103 REMARK 465 THR G 104 REMARK 465 TYR G 105 REMARK 465 GLY G 106 REMARK 465 GLU G 107 REMARK 465 PRO G 108 REMARK 465 GLU G 109 REMARK 465 SER G 110 REMARK 465 ALA G 111 REMARK 465 GLY G 112 REMARK 465 PRO G 113 REMARK 465 SER G 114 REMARK 465 ARG G 115 REMARK 465 ALA G 116 REMARK 465 VAL G 117 REMARK 465 ARG G 118 REMARK 465 GLN G 119 REMARK 465 SER G 120 REMARK 465 VAL G 121 REMARK 465 THR G 122 REMARK 465 SER G 123 REMARK 465 PHE G 124 REMARK 465 PRO G 125 REMARK 465 ASP G 126 REMARK 465 ALA G 127 REMARK 465 ASP G 128 REMARK 465 ALA G 129 REMARK 465 PHE G 130 REMARK 465 HIS G 131 REMARK 465 HIS G 132 REMARK 465 GLN G 133 REMARK 465 VAL G 134 REMARK 465 HIS G 135 REMARK 465 ASP G 136 REMARK 465 ASP G 137 REMARK 465 ASP G 138 REMARK 465 LEU G 139 REMARK 465 LEU G 140 REMARK 465 SER G 141 REMARK 465 SER G 142 REMARK 465 SER G 143 REMARK 465 GLU G 144 REMARK 465 GLU G 145 REMARK 465 GLU G 146 REMARK 465 CYS G 147 REMARK 465 LYS G 148 REMARK 465 ASP G 149 REMARK 465 ARG G 150 REMARK 465 GLU G 151 REMARK 465 ARG G 152 REMARK 465 PRO G 153 REMARK 465 MET G 154 REMARK 465 TYR G 155 REMARK 465 GLY G 156 REMARK 465 ARG G 157 REMARK 465 ASP G 158 REMARK 465 SER G 159 REMARK 465 ALA G 160 REMARK 465 TYR G 161 REMARK 465 GLN G 162 REMARK 465 SER G 163 REMARK 465 ILE G 164 REMARK 465 THR G 165 REMARK 465 HIS G 166 REMARK 465 TYR G 167 REMARK 465 ARG G 168 REMARK 465 PRO G 169 REMARK 465 VAL G 170 REMARK 465 SER G 171 REMARK 465 ALA G 172 REMARK 465 SER G 173 REMARK 465 ARG G 174 REMARK 465 SER G 175 REMARK 465 SER G 176 REMARK 465 LEU G 177 REMARK 465 ASP G 178 REMARK 465 LEU G 179 REMARK 465 SER G 180 REMARK 465 TYR G 181 REMARK 465 TYR G 182 REMARK 465 PRO G 183 REMARK 465 THR G 184 REMARK 465 SER G 185 REMARK 465 SER G 186 REMARK 465 SER G 187 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN G 44 CB CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE B 39 76.45 -100.69 REMARK 500 REMARK 500 REMARK: NULL DBREF 7NDY A 2 89 UNP O75531 BAF_HUMAN 2 89 DBREF 7NDY B 2 89 UNP O75531 BAF_HUMAN 2 89 DBREF 7NDY G 2 187 UNP P50402 EMD_HUMAN 2 187 SEQADV 7NDY GLY A 1 UNP O75531 EXPRESSION TAG SEQADV 7NDY ALA A 67 UNP O75531 CYS 67 CONFLICT SEQADV 7NDY ALA A 77 UNP O75531 CYS 77 CONFLICT SEQADV 7NDY ALA A 80 UNP O75531 CYS 80 CONFLICT SEQADV 7NDY ALA A 85 UNP O75531 CYS 85 CONFLICT SEQADV 7NDY GLY B 1 UNP O75531 EXPRESSION TAG SEQADV 7NDY ALA B 67 UNP O75531 CYS 67 CONFLICT SEQADV 7NDY ALA B 77 UNP O75531 CYS 77 CONFLICT SEQADV 7NDY ALA B 80 UNP O75531 CYS 80 CONFLICT SEQADV 7NDY ALA B 85 UNP O75531 CYS 85 CONFLICT SEQADV 7NDY GLY G 1 UNP P50402 EXPRESSION TAG SEQRES 1 A 89 GLY THR TPO SEP GLN LYS HIS ARG ASP PHE VAL ALA GLU SEQRES 2 A 89 PRO MET GLY GLU LYS PRO VAL GLY SER LEU ALA GLY ILE SEQRES 3 A 89 GLY GLU VAL LEU GLY LYS LYS LEU GLU GLU ARG GLY PHE SEQRES 4 A 89 ASP LYS ALA TYR VAL VAL LEU GLY GLN PHE LEU VAL LEU SEQRES 5 A 89 LYS LYS ASP GLU ASP LEU PHE ARG GLU TRP LEU LYS ASP SEQRES 6 A 89 THR ALA GLY ALA ASN ALA LYS GLN SER ARG ASP ALA PHE SEQRES 7 A 89 GLY ALA LEU ARG GLU TRP ALA ASP ALA PHE LEU SEQRES 1 B 89 GLY THR TPO SEP GLN LYS HIS ARG ASP PHE VAL ALA GLU SEQRES 2 B 89 PRO MET GLY GLU LYS PRO VAL GLY SER LEU ALA GLY ILE SEQRES 3 B 89 GLY GLU VAL LEU GLY LYS LYS LEU GLU GLU ARG GLY PHE SEQRES 4 B 89 ASP LYS ALA TYR VAL VAL LEU GLY GLN PHE LEU VAL LEU SEQRES 5 B 89 LYS LYS ASP GLU ASP LEU PHE ARG GLU TRP LEU LYS ASP SEQRES 6 B 89 THR ALA GLY ALA ASN ALA LYS GLN SER ARG ASP ALA PHE SEQRES 7 B 89 GLY ALA LEU ARG GLU TRP ALA ASP ALA PHE LEU SEQRES 1 G 187 GLY ASP ASN TYR ALA ASP LEU SER ASP THR GLU LEU THR SEQRES 2 G 187 THR LEU LEU ARG ARG TYR ASN ILE PRO HIS GLY PRO VAL SEQRES 3 G 187 VAL GLY SER THR ARG ARG LEU TYR GLU LYS LYS ILE PHE SEQRES 4 G 187 GLU TYR GLU THR GLN ARG ARG ARG LEU SER PRO PRO SER SEQRES 5 G 187 SER SER ALA ALA SER SER TYR SER PHE SER ASP LEU ASN SEQRES 6 G 187 SER THR ARG GLY ASP ALA ASP MET TYR ASP LEU PRO LYS SEQRES 7 G 187 LYS GLU ASP ALA LEU LEU TYR GLN SER LYS GLY TYR ASN SEQRES 8 G 187 ASP ASP TYR TYR GLU GLU SER TYR PHE THR THR ARG THR SEQRES 9 G 187 TYR GLY GLU PRO GLU SER ALA GLY PRO SER ARG ALA VAL SEQRES 10 G 187 ARG GLN SER VAL THR SER PHE PRO ASP ALA ASP ALA PHE SEQRES 11 G 187 HIS HIS GLN VAL HIS ASP ASP ASP LEU LEU SER SER SER SEQRES 12 G 187 GLU GLU GLU CYS LYS ASP ARG GLU ARG PRO MET TYR GLY SEQRES 13 G 187 ARG ASP SER ALA TYR GLN SER ILE THR HIS TYR ARG PRO SEQRES 14 G 187 VAL SER ALA SER ARG SER SER LEU ASP LEU SER TYR TYR SEQRES 15 G 187 PRO THR SER SER SER MODRES 7NDY TPO A 3 THR MODIFIED RESIDUE MODRES 7NDY SEP A 4 SER MODIFIED RESIDUE MODRES 7NDY TPO B 3 THR MODIFIED RESIDUE MODRES 7NDY SEP B 4 SER MODIFIED RESIDUE HET TPO A 3 11 HET SEP A 4 10 HET TPO B 3 11 HET SEP B 4 10 HET EPE B 101 15 HETNAM TPO PHOSPHOTHREONINE HETNAM SEP PHOSPHOSERINE HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN TPO PHOSPHONOTHREONINE HETSYN SEP PHOSPHONOSERINE HETSYN EPE HEPES FORMUL 1 TPO 2(C4 H10 N O6 P) FORMUL 1 SEP 2(C3 H8 N O6 P) FORMUL 4 EPE C8 H18 N2 O4 S FORMUL 5 HOH *208(H2 O) HELIX 1 AA1 THR A 2 ALA A 12 1 11 HELIX 2 AA2 PRO A 19 LEU A 23 5 5 HELIX 3 AA3 GLY A 27 ARG A 37 1 11 HELIX 4 AA4 LYS A 41 LEU A 52 1 12 HELIX 5 AA5 ASP A 55 GLY A 68 1 14 HELIX 6 AA6 ASN A 70 LEU A 89 1 20 HELIX 7 AA7 TPO B 3 ALA B 12 1 10 HELIX 8 AA8 PRO B 19 LEU B 23 5 5 HELIX 9 AA9 GLY B 27 ARG B 37 1 11 HELIX 10 AB1 LYS B 41 LEU B 52 1 12 HELIX 11 AB2 ASP B 55 GLY B 68 1 14 HELIX 12 AB3 ASN B 70 LEU B 89 1 20 HELIX 13 AB4 ASN G 3 LEU G 7 5 5 HELIX 14 AB5 SER G 8 TYR G 19 1 12 HELIX 15 AB6 THR G 30 GLN G 44 1 15 LINK C THR A 2 N TPO A 3 1555 1555 1.35 LINK C TPO A 3 N SEP A 4 1555 1555 1.35 LINK C SEP A 4 N GLN A 5 1555 1555 1.33 LINK C THR B 2 N TPO B 3 1555 1555 1.34 LINK C TPO B 3 N SEP B 4 1555 1555 1.35 LINK C SEP B 4 N GLN B 5 1555 1555 1.34 CRYST1 33.050 40.628 43.224 69.51 69.68 85.03 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030257 -0.002631 -0.010967 0.00000 SCALE2 0.000000 0.024706 -0.009006 0.00000 SCALE3 0.000000 0.000000 0.026259 0.00000