HEADER LYASE 03-FEB-21 7NED TITLE THIOUROCANATE HYDRATASE FROM PAENIBACILLUS SP. SOIL724D2 IN COMPLEX TITLE 2 WITH COFACTOR NAD+ AND UROCANATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: UROCANATE HYDRATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: UROCANASE,IMIDAZOLONEPROPIONATE HYDROLASE,THIOUROCANATE COMPND 5 HYDRATASE; COMPND 6 EC: 4.2.1.49; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PAENIBACILLUS SP. SOIL724D2; SOURCE 3 ORGANISM_TAXID: 1736392; SOURCE 4 GENE: HUTU, ASG85_10330; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS LYASE, THIOUROCANATE HYDRATASE, ERGOTHIONEINE CATABOLISM EXPDTA X-RAY DIFFRACTION AUTHOR F.LEISINGER,F.P.SEEBECK REVDAT 3 31-JAN-24 7NED 1 REMARK REVDAT 2 03-MAR-21 7NED 1 JRNL REVDAT 1 24-FEB-21 7NED 0 JRNL AUTH M.A.BELIAEVA,F.LEISINGER,F.P.SEEBECK JRNL TITL IN VITRO RECONSTITUTION OF A FIVE-STEP PATHWAY FOR BACTERIAL JRNL TITL 2 ERGOTHIONEINE CATABOLISM. JRNL REF ACS CHEM.BIOL. V. 16 397 2021 JRNL REFN ESSN 1554-8937 JRNL PMID 33544568 JRNL DOI 10.1021/ACSCHEMBIO.0C00968 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 41644 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2070 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3200 - 4.6900 1.00 2816 176 0.1623 0.1489 REMARK 3 2 4.6800 - 3.7200 1.00 2732 111 0.1388 0.1468 REMARK 3 3 3.7200 - 3.2500 1.00 2689 137 0.1649 0.1667 REMARK 3 4 3.2500 - 2.9500 1.00 2653 138 0.1768 0.1467 REMARK 3 5 2.9500 - 2.7400 1.00 2610 142 0.1809 0.1728 REMARK 3 6 2.7400 - 2.5800 1.00 2641 114 0.1718 0.1525 REMARK 3 7 2.5800 - 2.4500 1.00 2636 128 0.1749 0.2078 REMARK 3 8 2.4500 - 2.3400 1.00 2631 142 0.1733 0.1967 REMARK 3 9 2.3400 - 2.2500 1.00 2616 129 0.1741 0.1832 REMARK 3 10 2.2500 - 2.1700 1.00 2576 152 0.1768 0.1920 REMARK 3 11 2.1700 - 2.1100 1.00 2639 123 0.1874 0.2007 REMARK 3 12 2.1100 - 2.0500 1.00 2596 156 0.1878 0.2326 REMARK 3 13 2.0500 - 1.9900 1.00 2592 126 0.2099 0.2107 REMARK 3 14 1.9900 - 1.9400 1.00 2567 147 0.2132 0.2297 REMARK 3 15 1.9400 - 1.9000 1.00 2580 149 0.2341 0.2710 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.153 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.737 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 4372 REMARK 3 ANGLE : 1.383 5932 REMARK 3 CHIRALITY : 0.093 659 REMARK 3 PLANARITY : 0.009 780 REMARK 3 DIHEDRAL : 23.128 1588 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7NED COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1292113810. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41723 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 48.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : 0.21200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.20 REMARK 200 R MERGE FOR SHELL (I) : 1.32100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1W1U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: (NH4)2SO4, BIS-TRIS-BUFFER, PH 5.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.5K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 27.17450 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.73300 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 27.17450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 75.73300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9670 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33980 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 54.34900 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 151.46600 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1062 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 37 CD CE NZ REMARK 480 GLU A 106 CG CD OE1 OE2 REMARK 480 ARG A 110 CG CD NE CZ NH1 NH2 REMARK 480 GLU A 113 CD OE1 OE2 REMARK 480 ASP A 191 CB CG OD1 OD2 REMARK 480 GLU A 272 CB CG CD OE1 OE2 REMARK 480 GLU A 276 CG CD OE1 OE2 REMARK 480 GLU A 283 CG CD OE1 OE2 REMARK 480 LYS A 305 CG CD CE NZ REMARK 480 GLN A 327 CD OE1 NE2 REMARK 480 GLU A 394 CG CD OE1 OE2 REMARK 480 ASN A 546 CB CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 269 OD2 ASP A 288 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 190 CD GLU A 190 OE1 -0.069 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 37 CB - CG - CD ANGL. DEV. = -16.8 DEGREES REMARK 500 PHE A 159 CB - CG - CD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ARG A 192 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 ASP A 455 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 35 67.03 -152.34 REMARK 500 ALA A 44 -43.10 77.70 REMARK 500 LEU A 45 21.66 -146.85 REMARK 500 SER A 75 56.66 27.68 REMARK 500 THR A 84 -112.57 -127.22 REMARK 500 CYS A 96 38.03 70.31 REMARK 500 TRP A 127 37.93 74.45 REMARK 500 GLN A 254 47.88 -141.34 REMARK 500 SER A 431 -155.99 -156.76 REMARK 500 HIS A 442 100.58 -164.05 REMARK 500 ILE A 445 -99.80 -136.42 REMARK 500 SER A 454 31.51 -87.16 REMARK 500 MET A 472 24.02 83.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 PHE A 159 0.07 SIDE CHAIN REMARK 500 PHE A 351 0.06 SIDE CHAIN REMARK 500 ASP A 455 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue URO A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAD A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 703 DBREF1 7NED A 1 546 UNP A0A0Q9KFZ4_9BACL DBREF2 7NED A A0A0Q9KFZ4 1 546 SEQRES 1 A 546 MET GLU ARG ILE THR ALA ALA ARG GLY LEU GLU LEU ARG SEQRES 2 A 546 CYS LYS GLY TRP ARG GLN GLU ALA LEU LEU ARG MET LEU SEQRES 3 A 546 GLU ASN VAL LEU GLU ASN GLY GLU ASN GLN LYS GLU LEU SEQRES 4 A 546 ILE VAL TYR ALA ALA LEU ALA LYS ALA ALA ARG ASN TRP SEQRES 5 A 546 PRO SER TYR HIS ALA ILE VAL ARG THR LEU LYS GLU LEU SEQRES 6 A 546 GLU GLU ASP GLU THR LEU VAL ILE GLN SER GLY LYS PRO SEQRES 7 A 546 ILE GLY ILE PHE LYS THR HIS ARG PHE ALA PRO LEU ILE SEQRES 8 A 546 VAL MET ALA ASN CYS ASN LEU VAL GLY ARG TRP ALA THR SEQRES 9 A 546 SER GLU ASN PHE TYR ARG LEU GLN GLU LYS GLY LEU LEU SEQRES 10 A 546 ILE TRP GLY GLY LEU THR ALA ALA ALA TRP GLN TYR ILE SEQRES 11 A 546 GLY SER GLN GLY VAL ILE GLN GLY THR TYR GLU ILE PHE SEQRES 12 A 546 GLN SER ILE ALA ARG LEU HIS PHE ASN GLY SER LEU ALA SEQRES 13 A 546 GLY LYS PHE ILE LEU THR ALA GLY LEU GLY GLY MET GLY SEQRES 14 A 546 GLY ALA GLN PRO LEU ALA GLY THR LEU ALA GLY ALA ALA SEQRES 15 A 546 ILE LEU CYS VAL GLU VAL SER GLU ASP ARG VAL ASP ARG SEQRES 16 A 546 ARG LEU GLN THR ASN TYR LEU GLN ARG LYS THR ARG SER SEQRES 17 A 546 LEU ASP GLU ALA LEU LEU TRP ILE GLU GLU ALA VAL ASP SEQRES 18 A 546 ASN LEU HIS PRO VAL SER VAL GLY LEU THR GLY ASN ALA SEQRES 19 A 546 SER ASP ILE TYR PRO GLU LEU VAL ARG ARG GLY ILE THR SEQRES 20 A 546 PRO ASP ILE VAL THR ASP GLN THR SER ALA HIS ASP LEU SEQRES 21 A 546 VAL TYR GLY TYR VAL PRO SER GLY TYR ARG VAL GLU GLU SEQRES 22 A 546 LEU GLU GLU ALA ARG ALA ASN ASP PRO GLU GLN LEU GLN SEQRES 23 A 546 ARG ASP ALA GLY ALA SER ILE ALA VAL GLU VAL GLU ALA SEQRES 24 A 546 MET LEU GLU LEU LYS LYS ARG GLY ALA ILE VAL PHE ASP SEQRES 25 A 546 ASN GLY ASN ASN ILE ARG SER GLN ALA LYS GLU TYR GLY SEQRES 26 A 546 VAL GLN ASN ALA PHE ASP ILE ASP ILE PHE THR GLU ALA SEQRES 27 A 546 PHE LEU ARG PRO LEU PHE ALA ARG ALA ILE GLY PRO PHE SEQRES 28 A 546 ARG TRP VAL ALA LEU SER GLY GLU LEU SER ASP ILE HIS SEQRES 29 A 546 ALA ILE ASP GLU PHE ILE LEU GLU ALA PHE SER ASP ASN SEQRES 30 A 546 GLU VAL ILE ALA ASN TRP ILE ARG LEU ALA ARG GLU HIS SEQRES 31 A 546 VAL PRO VAL GLU GLY LEU PRO ALA ARG ILE GLY TRP PHE SEQRES 32 A 546 GLY HIS GLY ASP ARG THR LYS LEU ALA LEU ALA VAL ASN SEQRES 33 A 546 GLN MET VAL ARG GLU GLY LYS LEU GLN GLY PRO ILE ALA SEQRES 34 A 546 PHE SER ARG ASP HIS LEU ASP ALA ALA SER MET THR HIS SEQRES 35 A 546 PRO ASN ILE MET THR GLU ARG MET LYS ASP GLY SER ASP SEQRES 36 A 546 ALA ILE ALA ASP TRP PRO LEU LEU ASN ALA MET LEU ASN SEQRES 37 A 546 CYS SER SER MET ALA ASP LEU VAL THR ILE HIS SER GLY SEQRES 38 A 546 GLY GLY GLY TYR ALA GLY TYR MET THR SER ALA GLY VAL SEQRES 39 A 546 THR LEU VAL ALA ASP GLY SER THR GLU SER ASP ILE ARG SEQRES 40 A 546 LEU GLU THR THR LEU ASN ASN ASP THR GLY LEU GLY VAL SEQRES 41 A 546 LEU ARG TYR ALA ASP ALA GLY TYR GLU GLU SER ALA ASP SEQRES 42 A 546 GLU VAL ARG LEU LYS ASP ILE ARG TRP ILE LYS THR ASN HET URO A 701 10 HET NAD A 702 70 HET EDO A 703 10 HETNAM URO (2E)-3-(1H-IMIDAZOL-4-YL)ACRYLIC ACID HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 URO C6 H6 N2 O2 FORMUL 3 NAD C21 H27 N7 O14 P2 FORMUL 4 EDO C2 H6 O2 FORMUL 5 HOH *271(H2 O) HELIX 1 AA1 GLY A 16 ASN A 32 1 17 HELIX 2 AA2 ASN A 35 GLU A 38 5 4 HELIX 3 AA3 ASN A 51 LEU A 65 1 15 HELIX 4 AA4 VAL A 99 ALA A 103 5 5 HELIX 5 AA5 THR A 104 LYS A 114 1 11 HELIX 6 AA6 SER A 132 PHE A 151 1 20 HELIX 7 AA7 MET A 168 GLY A 170 5 3 HELIX 8 AA8 ALA A 171 ALA A 179 1 9 HELIX 9 AA9 SER A 189 THR A 199 1 11 HELIX 10 AB1 SER A 208 LEU A 223 1 16 HELIX 11 AB2 ASN A 233 ARG A 244 1 12 HELIX 12 AB3 ARG A 270 GLU A 272 5 3 HELIX 13 AB4 GLU A 273 ASP A 281 1 9 HELIX 14 AB5 ASP A 281 ARG A 306 1 26 HELIX 15 AB6 ASN A 316 TYR A 324 1 9 HELIX 16 AB7 ASN A 328 ILE A 332 5 5 HELIX 17 AB8 PHE A 335 PHE A 339 1 5 HELIX 18 AB9 LEU A 340 ALA A 345 1 6 HELIX 19 AC1 GLU A 359 PHE A 374 1 16 HELIX 20 AC2 ASN A 377 VAL A 391 1 15 HELIX 21 AC3 GLY A 406 GLU A 421 1 16 HELIX 22 AC4 ALA A 458 SER A 470 1 13 HELIX 23 AC5 GLY A 482 ALA A 486 5 5 HELIX 24 AC6 SER A 501 ALA A 526 1 26 HELIX 25 AC7 TYR A 528 ASP A 539 1 12 SHEET 1 AA1 2 ILE A 40 TYR A 42 0 SHEET 2 AA1 2 ALA A 46 LYS A 47 -1 O ALA A 46 N VAL A 41 SHEET 1 AA2 8 LYS A 77 LYS A 83 0 SHEET 2 AA2 8 GLU A 69 GLN A 74 -1 N VAL A 72 O ILE A 79 SHEET 3 AA2 8 ILE A 91 ASN A 95 1 O VAL A 92 N ILE A 73 SHEET 4 AA2 8 LEU A 475 SER A 480 1 O ILE A 478 N ASN A 95 SHEET 5 AA2 8 THR A 490 ALA A 498 -1 O SER A 491 N HIS A 479 SHEET 6 AA2 8 ILE A 428 ARG A 432 -1 N ILE A 428 O ALA A 498 SHEET 7 AA2 8 PHE A 351 ALA A 355 -1 N ARG A 352 O SER A 431 SHEET 8 AA2 8 ALA A 398 ILE A 400 -1 O ARG A 399 N TRP A 353 SHEET 1 AA3 6 LYS A 77 LYS A 83 0 SHEET 2 AA3 6 GLU A 69 GLN A 74 -1 N VAL A 72 O ILE A 79 SHEET 3 AA3 6 ILE A 91 ASN A 95 1 O VAL A 92 N ILE A 73 SHEET 4 AA3 6 LEU A 475 SER A 480 1 O ILE A 478 N ASN A 95 SHEET 5 AA3 6 THR A 490 ALA A 498 -1 O SER A 491 N HIS A 479 SHEET 6 AA3 6 MET A 440 THR A 441 -1 N THR A 441 O THR A 490 SHEET 1 AA4 7 ARG A 204 THR A 206 0 SHEET 2 AA4 7 VAL A 226 THR A 231 1 O GLY A 229 N ARG A 204 SHEET 3 AA4 7 ALA A 182 GLU A 187 1 N CYS A 185 O VAL A 228 SHEET 4 AA4 7 PHE A 159 ALA A 163 1 N THR A 162 O LEU A 184 SHEET 5 AA4 7 ILE A 250 VAL A 251 1 O ILE A 250 N LEU A 161 SHEET 6 AA4 7 ILE A 309 ASP A 312 1 O ILE A 309 N VAL A 251 SHEET 7 AA4 7 ASP A 333 ILE A 334 1 O ASP A 333 N ASP A 312 SITE 1 AC1 10 TYR A 42 LEU A 122 THR A 123 TYR A 129 SITE 2 AC1 10 MET A 168 ARG A 352 ASP A 433 NAD A 702 SITE 3 AC1 10 HOH A 822 HOH A 931 SITE 1 AC2 28 TYR A 42 ALA A 43 ALA A 44 GLY A 166 SITE 2 AC2 28 GLY A 167 MET A 168 GLY A 169 GLU A 187 SITE 3 AC2 28 VAL A 188 ARG A 192 GLY A 232 ASN A 233 SITE 4 AC2 28 ALA A 234 GLN A 254 THR A 255 SER A 256 SITE 5 AC2 28 HIS A 258 TYR A 264 VAL A 265 GLY A 314 SITE 6 AC2 28 ASN A 315 ILE A 445 TYR A 485 URO A 701 SITE 7 AC2 28 HOH A 807 HOH A 822 HOH A 829 HOH A1013 SITE 1 AC3 6 ARG A 3 GLY A 33 GLU A 34 ASN A 35 SITE 2 AC3 6 GLN A 36 LYS A 37 CRYST1 54.349 62.747 151.466 90.00 90.00 90.00 P 21 2 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018400 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015937 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006602 0.00000