HEADER VIRAL PROTEIN/IMMUNE SYSTEM 04-FEB-21 7NEH TITLE CRYSTAL STRUCTURE OF THE RECEPTOR BINDING DOMAIN OF SARS-COV-2 SPIKE TITLE 2 GLYCOPROTEIN IN COMPLEX WITH COVOX-269 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: COVOX-269 FAB HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: COVOX-269 FAB LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: SPIKE GLYCOPROTEIN; COMPND 11 CHAIN: E; COMPND 12 SYNONYM: S GLYCOPROTEIN,E2,PEPLOMER PROTEIN; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 17 2; SOURCE 18 ORGANISM_COMMON: 2019-NCOV; SOURCE 19 ORGANISM_TAXID: 2697049; SOURCE 20 GENE: S, 2; SOURCE 21 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 22 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SARS-COV-2 B.1.1.7 VARIANT, N501Y MUTATION, ANTIBODY, RECEPTOR- KEYWDS 2 BINDING-DOMAIN, SPIKE, NEUTRALISATION, VIRAL PROTEIN/IMMUNE SYSTEM, KEYWDS 3 VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.ZHOU,J.REN,D.STUART REVDAT 4 31-JAN-24 7NEH 1 REMARK REVDAT 3 28-APR-21 7NEH 1 JRNL REVDAT 2 31-MAR-21 7NEH 1 JRNL REVDAT 1 03-MAR-21 7NEH 0 JRNL AUTH P.SUPASA,D.ZHOU,W.DEJNIRATTISAI,C.LIU,A.J.MENTZER,H.M.GINN, JRNL AUTH 2 Y.ZHAO,H.M.E.DUYVESTEYN,R.NUTALAI,A.TUEKPRAKHON,B.WANG, JRNL AUTH 3 G.C.PAESEN,J.SLON-CAMPOS,C.LOPEZ-CAMACHO,B.HALLIS,N.COOMBES, JRNL AUTH 4 K.R.BEWLEY,S.CHARLTON,T.S.WALTER,E.BARNES,S.J.DUNACHIE, JRNL AUTH 5 D.SKELLY,S.F.LUMLEY,N.BAKER,I.SHAIK,H.E.HUMPHRIES,K.GODWIN, JRNL AUTH 6 N.GENT,A.SIENKIEWICZ,C.DOLD,R.LEVIN,T.DONG,A.J.POLLARD, JRNL AUTH 7 J.C.KNIGHT,P.KLENERMAN,D.CROOK,T.LAMBE,E.CLUTTERBUCK,S.BIBI, JRNL AUTH 8 A.FLAXMAN,M.BITTAYE,S.BELIJ-RAMMERSTORFER,S.GILBERT, JRNL AUTH 9 D.R.HALL,M.A.WILLIAMS,N.G.PATERSON,W.JAMES,M.W.CARROLL, JRNL AUTH10 E.E.FRY,J.MONGKOLSAPAYA,J.REN,D.I.STUART,G.R.SCREATON JRNL TITL REDUCED NEUTRALIZATION OF SARS-COV-2 B.1.1.7 VARIANT BY JRNL TITL 2 CONVALESCENT AND VACCINE SERA. JRNL REF CELL V. 184 2201 2021 JRNL REFN ISSN 1097-4172 JRNL PMID 33743891 JRNL DOI 10.1016/J.CELL.2021.02.033 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 88029 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 4325 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.7400 - 5.5000 1.00 2980 162 0.1692 0.1602 REMARK 3 2 5.5000 - 4.3600 1.00 2824 197 0.1321 0.1387 REMARK 3 3 4.3600 - 3.8100 1.00 2851 135 0.1465 0.1482 REMARK 3 4 3.8100 - 3.4600 1.00 2847 134 0.1661 0.1853 REMARK 3 5 3.4600 - 3.2200 1.00 2824 140 0.1782 0.2071 REMARK 3 6 3.2200 - 3.0300 1.00 2830 150 0.1952 0.2150 REMARK 3 7 3.0300 - 2.8700 1.00 2819 138 0.1952 0.2159 REMARK 3 8 2.8700 - 2.7500 1.00 2772 150 0.1918 0.1963 REMARK 3 9 2.7500 - 2.6400 1.00 2806 142 0.1976 0.2246 REMARK 3 10 2.6400 - 2.5500 1.00 2817 150 0.2005 0.2495 REMARK 3 11 2.5500 - 2.4700 1.00 2763 170 0.2088 0.2355 REMARK 3 12 2.4700 - 2.4000 1.00 2796 137 0.2074 0.2095 REMARK 3 13 2.4000 - 2.3400 1.00 2760 155 0.2059 0.2073 REMARK 3 14 2.3400 - 2.2800 1.00 2796 146 0.2017 0.2266 REMARK 3 15 2.2800 - 2.2300 1.00 2778 140 0.2044 0.2063 REMARK 3 16 2.2300 - 2.1800 1.00 2776 159 0.2088 0.2187 REMARK 3 17 2.1800 - 2.1400 1.00 2759 151 0.2028 0.2428 REMARK 3 18 2.1400 - 2.1000 1.00 2776 158 0.2082 0.2116 REMARK 3 19 2.1000 - 2.0600 1.00 2808 133 0.2249 0.2745 REMARK 3 20 2.0600 - 2.0300 1.00 2786 113 0.2443 0.2643 REMARK 3 21 2.0300 - 1.9900 1.00 2772 144 0.2515 0.3063 REMARK 3 22 1.9900 - 1.9600 1.00 2817 125 0.2810 0.2874 REMARK 3 23 1.9600 - 1.9300 1.00 2746 151 0.3047 0.3344 REMARK 3 24 1.9300 - 1.9100 1.00 2744 164 0.3129 0.3258 REMARK 3 25 1.9100 - 1.8800 1.00 2808 121 0.3187 0.3282 REMARK 3 26 1.8800 - 1.8600 1.00 2768 137 0.3361 0.3256 REMARK 3 27 1.8600 - 1.8300 1.00 2804 124 0.3453 0.3515 REMARK 3 28 1.8300 - 1.8100 1.00 2779 134 0.3668 0.4083 REMARK 3 29 1.8100 - 1.7900 0.99 2710 157 0.3792 0.3698 REMARK 3 30 1.7900 - 1.7700 0.92 2588 108 0.4043 0.3960 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.279 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.245 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5056 REMARK 3 ANGLE : 0.648 6831 REMARK 3 CHIRALITY : 0.046 759 REMARK 3 PLANARITY : 0.005 873 REMARK 3 DIHEDRAL : 13.017 1806 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 332 THROUGH 342 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.7830 77.0853 19.2299 REMARK 3 T TENSOR REMARK 3 T11: 0.9500 T22: 0.6899 REMARK 3 T33: 0.8372 T12: 0.1376 REMARK 3 T13: 0.0867 T23: -0.0856 REMARK 3 L TENSOR REMARK 3 L11: 0.5139 L22: 2.4429 REMARK 3 L33: 5.6678 L12: -0.8674 REMARK 3 L13: -1.3752 L23: 3.6781 REMARK 3 S TENSOR REMARK 3 S11: 0.0781 S12: -1.0554 S13: 0.8592 REMARK 3 S21: -0.5775 S22: -0.4718 S23: 0.1573 REMARK 3 S31: -2.1649 S32: -0.2930 S33: 0.0576 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 343 THROUGH 358 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2361 67.9140 10.6846 REMARK 3 T TENSOR REMARK 3 T11: 0.4840 T22: 0.2853 REMARK 3 T33: 0.4379 T12: -0.0439 REMARK 3 T13: 0.0872 T23: 0.0080 REMARK 3 L TENSOR REMARK 3 L11: 6.4930 L22: 8.1965 REMARK 3 L33: 5.2890 L12: -3.0448 REMARK 3 L13: -1.4764 L23: 3.0217 REMARK 3 S TENSOR REMARK 3 S11: 0.3892 S12: 0.2152 S13: 0.5234 REMARK 3 S21: -1.2028 S22: 0.0201 S23: -0.3060 REMARK 3 S31: -0.9407 S32: 0.1983 S33: -0.2510 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 359 THROUGH 393 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.7571 66.9752 22.5182 REMARK 3 T TENSOR REMARK 3 T11: 0.5131 T22: 0.8411 REMARK 3 T33: 0.6335 T12: 0.1329 REMARK 3 T13: 0.0479 T23: -0.0656 REMARK 3 L TENSOR REMARK 3 L11: 2.6306 L22: 2.6685 REMARK 3 L33: 5.8567 L12: 0.5246 REMARK 3 L13: 1.1618 L23: 3.7758 REMARK 3 S TENSOR REMARK 3 S11: 0.0425 S12: -0.7345 S13: 0.3158 REMARK 3 S21: -0.1318 S22: -0.5429 S23: 0.7881 REMARK 3 S31: -0.5637 S32: -1.4876 S33: 0.4403 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 394 THROUGH 421 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0901 55.6054 12.0545 REMARK 3 T TENSOR REMARK 3 T11: 0.3091 T22: 0.3696 REMARK 3 T33: 0.4191 T12: -0.0121 REMARK 3 T13: 0.0283 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 4.0273 L22: 3.9274 REMARK 3 L33: 4.1570 L12: -0.8968 REMARK 3 L13: -0.8188 L23: 1.9052 REMARK 3 S TENSOR REMARK 3 S11: 0.1108 S12: -0.1316 S13: -0.1252 REMARK 3 S21: -0.1219 S22: -0.1250 S23: -0.0146 REMARK 3 S31: -0.1287 S32: -0.2348 S33: -0.0768 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 422 THROUGH 516 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3854 56.4292 5.2639 REMARK 3 T TENSOR REMARK 3 T11: 0.3456 T22: 0.2681 REMARK 3 T33: 0.3913 T12: -0.0530 REMARK 3 T13: 0.0823 T23: -0.0205 REMARK 3 L TENSOR REMARK 3 L11: 3.4610 L22: 4.7305 REMARK 3 L33: 2.8745 L12: -1.1567 REMARK 3 L13: -0.4709 L23: 1.4598 REMARK 3 S TENSOR REMARK 3 S11: 0.1871 S12: 0.2338 S13: -0.0328 REMARK 3 S21: -0.6688 S22: 0.0656 S23: -0.4831 REMARK 3 S31: -0.4385 S32: 0.0832 S33: -0.2494 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 517 THROUGH 527 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4401 71.2100 32.6145 REMARK 3 T TENSOR REMARK 3 T11: 0.5471 T22: 0.9437 REMARK 3 T33: 0.5819 T12: 0.1300 REMARK 3 T13: 0.0946 T23: 0.0271 REMARK 3 L TENSOR REMARK 3 L11: 2.8658 L22: 5.3466 REMARK 3 L33: 6.4090 L12: -0.6612 REMARK 3 L13: 3.7510 L23: -1.9025 REMARK 3 S TENSOR REMARK 3 S11: -0.1556 S12: -0.5003 S13: 0.0712 REMARK 3 S21: 0.1025 S22: 0.4585 S23: 0.3804 REMARK 3 S31: -0.6454 S32: -0.7590 S33: -0.2282 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2980 30.3974 3.7432 REMARK 3 T TENSOR REMARK 3 T11: 0.2701 T22: 0.3532 REMARK 3 T33: 0.4606 T12: -0.0244 REMARK 3 T13: -0.0386 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.7007 L22: 4.3062 REMARK 3 L33: 1.8313 L12: 1.1540 REMARK 3 L13: -0.2185 L23: 0.6262 REMARK 3 S TENSOR REMARK 3 S11: 0.0815 S12: -0.0668 S13: -0.0154 REMARK 3 S21: 0.0976 S22: 0.0796 S23: -0.6190 REMARK 3 S31: 0.0304 S32: 0.1935 S33: -0.1213 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 114 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.5960 2.1760 -15.3525 REMARK 3 T TENSOR REMARK 3 T11: 0.2793 T22: 0.2901 REMARK 3 T33: 0.2215 T12: -0.0139 REMARK 3 T13: 0.0355 T23: 0.0224 REMARK 3 L TENSOR REMARK 3 L11: 2.4048 L22: 2.2400 REMARK 3 L33: 1.4963 L12: -0.2429 REMARK 3 L13: -0.4591 L23: -0.8301 REMARK 3 S TENSOR REMARK 3 S11: -0.0506 S12: 0.4063 S13: -0.1447 REMARK 3 S21: -0.4168 S22: -0.0208 S23: 0.0505 REMARK 3 S31: 0.3325 S32: 0.0214 S33: 0.0637 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 139 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1596 1.5580 -18.2959 REMARK 3 T TENSOR REMARK 3 T11: 0.3129 T22: 0.3206 REMARK 3 T33: 0.2350 T12: 0.0156 REMARK 3 T13: 0.0346 T23: 0.0319 REMARK 3 L TENSOR REMARK 3 L11: 1.5068 L22: 2.1525 REMARK 3 L33: 5.3224 L12: -0.1536 REMARK 3 L13: -1.0383 L23: 1.1153 REMARK 3 S TENSOR REMARK 3 S11: -0.0534 S12: 0.0650 S13: -0.1177 REMARK 3 S21: -0.2658 S22: -0.0527 S23: -0.0542 REMARK 3 S31: 0.2480 S32: 0.2226 S33: 0.1233 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.6991 36.9341 -21.2599 REMARK 3 T TENSOR REMARK 3 T11: 0.5093 T22: 0.4367 REMARK 3 T33: 0.3787 T12: -0.0237 REMARK 3 T13: -0.0091 T23: 0.0675 REMARK 3 L TENSOR REMARK 3 L11: 1.6551 L22: 6.3490 REMARK 3 L33: 4.9314 L12: -0.7411 REMARK 3 L13: -0.0023 L23: 2.7207 REMARK 3 S TENSOR REMARK 3 S11: -0.0011 S12: 0.2505 S13: -0.0447 REMARK 3 S21: -0.6603 S22: -0.2876 S23: 0.0191 REMARK 3 S31: -0.2895 S32: -0.7187 S33: 0.1571 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 19 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.1968 41.6681 -14.9448 REMARK 3 T TENSOR REMARK 3 T11: 0.5314 T22: 0.3797 REMARK 3 T33: 0.4693 T12: -0.0523 REMARK 3 T13: 0.1151 T23: 0.0398 REMARK 3 L TENSOR REMARK 3 L11: 0.8135 L22: 3.7088 REMARK 3 L33: 3.3544 L12: -0.1010 REMARK 3 L13: -0.2659 L23: 1.7741 REMARK 3 S TENSOR REMARK 3 S11: 0.0250 S12: 0.1285 S13: 0.0654 REMARK 3 S21: -0.7840 S22: 0.0498 S23: -0.4531 REMARK 3 S31: -0.4338 S32: -0.1381 S33: -0.0436 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 70 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9025 38.1466 -24.0741 REMARK 3 T TENSOR REMARK 3 T11: 0.7785 T22: 0.3394 REMARK 3 T33: 0.4520 T12: -0.1148 REMARK 3 T13: 0.1689 T23: 0.0567 REMARK 3 L TENSOR REMARK 3 L11: 0.1929 L22: 3.5638 REMARK 3 L33: 4.6746 L12: 0.7239 REMARK 3 L13: 0.7613 L23: 1.5012 REMARK 3 S TENSOR REMARK 3 S11: -0.0951 S12: 0.2643 S13: 0.2586 REMARK 3 S21: -1.3043 S22: 0.1329 S23: -0.8264 REMARK 3 S31: -0.6159 S32: 0.4096 S33: -0.0542 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 84 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.2032 33.8546 -16.0905 REMARK 3 T TENSOR REMARK 3 T11: 0.4174 T22: 0.3606 REMARK 3 T33: 0.3663 T12: -0.0033 REMARK 3 T13: 0.0682 T23: 0.0528 REMARK 3 L TENSOR REMARK 3 L11: 0.8208 L22: 3.1970 REMARK 3 L33: 0.8417 L12: 0.9457 REMARK 3 L13: 0.8403 L23: 1.2677 REMARK 3 S TENSOR REMARK 3 S11: -0.0239 S12: -0.0181 S13: 0.1189 REMARK 3 S21: -0.4294 S22: 0.0105 S23: -0.0109 REMARK 3 S31: -0.2235 S32: -0.1420 S33: 0.0472 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 115 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.7612 -0.6563 -18.6958 REMARK 3 T TENSOR REMARK 3 T11: 0.3618 T22: 0.2807 REMARK 3 T33: 0.2765 T12: 0.0011 REMARK 3 T13: -0.0391 T23: -0.0286 REMARK 3 L TENSOR REMARK 3 L11: 6.7199 L22: 5.5076 REMARK 3 L33: 6.2831 L12: 1.8530 REMARK 3 L13: -0.9840 L23: -0.8956 REMARK 3 S TENSOR REMARK 3 S11: 0.1770 S12: -0.2283 S13: -0.4419 REMARK 3 S21: -0.1662 S22: -0.1392 S23: 0.0003 REMARK 3 S31: 0.7864 S32: -0.0291 S33: 0.0149 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 130 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.0879 13.9031 -23.4776 REMARK 3 T TENSOR REMARK 3 T11: 0.4355 T22: 0.3501 REMARK 3 T33: 0.2492 T12: -0.0001 REMARK 3 T13: -0.0525 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 3.7782 L22: 3.9855 REMARK 3 L33: 4.0427 L12: 2.1708 REMARK 3 L13: -3.0399 L23: -2.0836 REMARK 3 S TENSOR REMARK 3 S11: 0.2000 S12: 0.1110 S13: 0.3103 REMARK 3 S21: -0.2456 S22: -0.2097 S23: 0.0937 REMARK 3 S31: -0.3230 S32: 0.1603 S33: 0.0062 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 152 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4808 13.0189 -16.8486 REMARK 3 T TENSOR REMARK 3 T11: 0.4194 T22: 0.3822 REMARK 3 T33: 0.2997 T12: 0.0601 REMARK 3 T13: -0.0141 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 8.0353 L22: 1.7233 REMARK 3 L33: 0.7992 L12: 0.5852 REMARK 3 L13: -0.3416 L23: -0.2991 REMARK 3 S TENSOR REMARK 3 S11: 0.0463 S12: 0.1796 S13: 0.1191 REMARK 3 S21: -0.1023 S22: -0.0006 S23: 0.2744 REMARK 3 S31: -0.1845 S32: -0.1013 S33: -0.0174 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 165 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7414 18.1488 -27.4251 REMARK 3 T TENSOR REMARK 3 T11: 0.5668 T22: 0.3691 REMARK 3 T33: 0.3715 T12: -0.0225 REMARK 3 T13: 0.0591 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 9.1094 L22: 4.3480 REMARK 3 L33: 4.9300 L12: 4.3699 REMARK 3 L13: -2.4891 L23: -4.2908 REMARK 3 S TENSOR REMARK 3 S11: 0.0657 S12: 0.2555 S13: -0.1754 REMARK 3 S21: -0.4989 S22: 0.0697 S23: -0.5335 REMARK 3 S31: 0.0615 S32: 0.2636 S33: -0.0360 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 176 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.4953 6.9028 -22.5036 REMARK 3 T TENSOR REMARK 3 T11: 0.3481 T22: 0.3471 REMARK 3 T33: 0.3035 T12: 0.0791 REMARK 3 T13: -0.0392 T23: -0.0592 REMARK 3 L TENSOR REMARK 3 L11: 5.8852 L22: 6.5121 REMARK 3 L33: 4.2424 L12: 4.2922 REMARK 3 L13: -2.2081 L23: -3.1772 REMARK 3 S TENSOR REMARK 3 S11: 0.0231 S12: 0.2612 S13: 0.0443 REMARK 3 S21: -0.3360 S22: 0.1328 S23: 0.4583 REMARK 3 S31: 0.0895 S32: -0.3730 S33: -0.1242 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7NEH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1292113816. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 88349 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 75.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.50 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7BEM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.09 M NPS, 0.1 M SODIUM HEPES AND REMARK 280 MOPS, 30% EDO_P8K, PH 7.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.95300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.95300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.40600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 74.85600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 41.40600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 74.85600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.95300 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.40600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 74.85600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 72.95300 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 41.40600 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 74.85600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 41.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, E, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH L 544 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 134 REMARK 465 ASP H 221 REMARK 465 LYS H 222 REMARK 465 GLU E 324 REMARK 465 THR E 325 REMARK 465 GLY E 326 REMARK 465 HIS E 327 REMARK 465 HIS E 328 REMARK 465 HIS E 329 REMARK 465 HIS E 330 REMARK 465 HIS E 331 REMARK 465 LYS E 528 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS E 527 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH H 600 O HOH H 709 1.99 REMARK 500 O HOH H 505 O HOH H 677 2.00 REMARK 500 O LYS H 218 O HOH H 501 2.01 REMARK 500 O HOH H 673 O HOH L 531 2.04 REMARK 500 O HOH H 599 O HOH H 642 2.05 REMARK 500 O HOH H 686 O HOH H 711 2.09 REMARK 500 O HOH L 523 O HOH L 540 2.09 REMARK 500 O HOH H 606 O HOH H 691 2.13 REMARK 500 O2 EDO E 906 O HOH E 1001 2.13 REMARK 500 O HOH H 642 O HOH L 548 2.13 REMARK 500 ND2 ASN H 73 O HOH H 502 2.15 REMARK 500 OE2 GLU L 162 O HOH L 401 2.16 REMARK 500 OE1 GLN L 79 O HOH L 402 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH H 503 O HOH H 503 3554 2.08 REMARK 500 O HOH H 696 O HOH H 730 3554 2.10 REMARK 500 O HOH H 669 O HOH E 1083 8455 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP H 148 66.94 66.74 REMARK 500 SER L 30 -126.63 56.43 REMARK 500 ALA L 51 -33.60 70.11 REMARK 500 PHE E 377 84.77 -151.53 REMARK 500 LYS E 386 49.40 -73.32 REMARK 500 ASP E 389 41.08 -109.00 REMARK 500 ASN E 422 -56.33 -129.97 REMARK 500 ASP E 428 38.06 -96.71 REMARK 500 ASN E 481 65.47 39.07 REMARK 500 REMARK 500 REMARK: NULL DBREF 7NEH H 1 222 PDB 7NEH 7NEH 1 222 DBREF 7NEH L 1 215 PDB 7NEH 7NEH 1 215 DBREF 7NEH E 333 528 UNP P0DTC2 SPIKE_SARS2 333 528 SEQADV 7NEH GLU E 324 UNP P0DTC2 EXPRESSION TAG SEQADV 7NEH THR E 325 UNP P0DTC2 EXPRESSION TAG SEQADV 7NEH GLY E 326 UNP P0DTC2 EXPRESSION TAG SEQADV 7NEH HIS E 327 UNP P0DTC2 EXPRESSION TAG SEQADV 7NEH HIS E 328 UNP P0DTC2 EXPRESSION TAG SEQADV 7NEH HIS E 329 UNP P0DTC2 EXPRESSION TAG SEQADV 7NEH HIS E 330 UNP P0DTC2 EXPRESSION TAG SEQADV 7NEH HIS E 331 UNP P0DTC2 EXPRESSION TAG SEQADV 7NEH HIS E 332 UNP P0DTC2 EXPRESSION TAG SEQADV 7NEH LYS E 527 UNP P0DTC2 PRO 527 ENGINEERED MUTATION SEQRES 1 H 222 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU ILE GLN SEQRES 2 H 222 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 222 LEU THR VAL ASN ARG ASN TYR MET SER TRP ILE ARG GLN SEQRES 4 H 222 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER VAL ILE TYR SEQRES 5 H 222 SER GLY GLY SER THR PHE TYR ALA ASP SER VAL LYS GLY SEQRES 6 H 222 ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR LEU SEQRES 7 H 222 SER LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA SEQRES 8 H 222 ILE TYR TYR CYS ALA ARG ASP PHE TYR GLU GLY SER PHE SEQRES 9 H 222 ASP ILE TRP GLY GLN GLY THR MET VAL THR VAL SER SER SEQRES 10 H 222 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 11 H 222 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 12 H 222 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 13 H 222 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 14 H 222 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 15 H 222 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 16 H 222 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 17 H 222 THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS ASP SEQRES 18 H 222 LYS SEQRES 1 L 215 ALA ILE GLN LEU THR GLN SER PRO SER PHE LEU SER ALA SEQRES 2 L 215 SER ILE GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 215 GLN GLY ILE SER SER TYR LEU ALA TRP TYR GLN GLN LYS SEQRES 4 L 215 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR ALA ALA SER SEQRES 5 L 215 THR LEU GLN SER GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 215 GLY SER GLY THR GLU PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 215 GLN PRO GLU ASP PHE ALA SER TYR TYR CYS GLN GLN LEU SEQRES 8 L 215 ASN SER TYR PRO ALA PRO VAL PHE GLY PRO GLY THR LYS SEQRES 9 L 215 VAL ASP ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 E 205 GLU THR GLY HIS HIS HIS HIS HIS HIS THR ASN LEU CYS SEQRES 2 E 205 PRO PHE GLY GLU VAL PHE ASN ALA THR ARG PHE ALA SER SEQRES 3 E 205 VAL TYR ALA TRP ASN ARG LYS ARG ILE SER ASN CYS VAL SEQRES 4 E 205 ALA ASP TYR SER VAL LEU TYR ASN SER ALA SER PHE SER SEQRES 5 E 205 THR PHE LYS CYS TYR GLY VAL SER PRO THR LYS LEU ASN SEQRES 6 E 205 ASP LEU CYS PHE THR ASN VAL TYR ALA ASP SER PHE VAL SEQRES 7 E 205 ILE ARG GLY ASP GLU VAL ARG GLN ILE ALA PRO GLY GLN SEQRES 8 E 205 THR GLY LYS ILE ALA ASP TYR ASN TYR LYS LEU PRO ASP SEQRES 9 E 205 ASP PHE THR GLY CYS VAL ILE ALA TRP ASN SER ASN ASN SEQRES 10 E 205 LEU ASP SER LYS VAL GLY GLY ASN TYR ASN TYR LEU TYR SEQRES 11 E 205 ARG LEU PHE ARG LYS SER ASN LEU LYS PRO PHE GLU ARG SEQRES 12 E 205 ASP ILE SER THR GLU ILE TYR GLN ALA GLY SER THR PRO SEQRES 13 E 205 CYS ASN GLY VAL GLU GLY PHE ASN CYS TYR PHE PRO LEU SEQRES 14 E 205 GLN SER TYR GLY PHE GLN PRO THR ASN GLY VAL GLY TYR SEQRES 15 E 205 GLN PRO TYR ARG VAL VAL VAL LEU SER PHE GLU LEU LEU SEQRES 16 E 205 HIS ALA PRO ALA THR VAL CYS GLY LYS LYS HET NAG A 1 14 HET NAG A 2 14 HET FUC A 3 10 HET EDO H 401 4 HET EDO H 402 4 HET EDO H 403 4 HET NO3 H 404 4 HET EDO H 405 4 HET EDO H 406 4 HET EDO H 407 4 HET EDO L 301 4 HET EDO L 302 4 HET EDO L 303 4 HET NO3 L 304 4 HET PEG L 305 7 HET EDO L 306 4 HET EDO L 307 4 HET EDO L 308 4 HET SO4 L 309 5 HET EDO E 901 4 HET EDO E 902 4 HET EDO E 903 4 HET EDO E 904 4 HET NO3 E 905 4 HET EDO E 906 4 HET EDO E 907 4 HET EDO E 908 4 HET CL E 909 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM EDO 1,2-ETHANEDIOL HETNAM NO3 NITRATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN EDO ETHYLENE GLYCOL FORMUL 4 NAG 2(C8 H15 N O6) FORMUL 4 FUC C6 H12 O5 FORMUL 5 EDO 19(C2 H6 O2) FORMUL 8 NO3 3(N O3 1-) FORMUL 16 PEG C4 H10 O3 FORMUL 20 SO4 O4 S 2- FORMUL 29 CL CL 1- FORMUL 30 HOH *496(H2 O) HELIX 1 AA1 THR H 28 ASN H 32 5 5 HELIX 2 AA2 ARG H 86 THR H 90 5 5 HELIX 3 AA3 SER H 160 ALA H 162 5 3 HELIX 4 AA4 SER H 191 THR H 195 5 5 HELIX 5 AA5 LYS H 205 ASN H 208 5 4 HELIX 6 AA6 GLN L 79 PHE L 83 5 5 HELIX 7 AA7 SER L 122 LYS L 127 1 6 HELIX 8 AA8 LYS L 184 GLU L 188 1 5 HELIX 9 AA9 PRO E 337 ASN E 343 1 7 HELIX 10 AB1 SER E 349 TRP E 353 5 5 HELIX 11 AB2 ASP E 364 SER E 371 1 8 HELIX 12 AB3 PRO E 384 ASN E 388 5 5 HELIX 13 AB4 ASP E 405 ILE E 410 5 6 HELIX 14 AB5 GLY E 416 ASN E 422 1 7 HELIX 15 AB6 SER E 438 SER E 443 1 6 HELIX 16 AB7 GLY E 502 TYR E 505 5 4 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O ALA H 23 N VAL H 5 SHEET 3 AA1 4 THR H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA1 4 PHE H 67 ASP H 72 -1 N THR H 68 O GLN H 81 SHEET 1 AA2 6 LEU H 11 ILE H 12 0 SHEET 2 AA2 6 THR H 111 VAL H 115 1 O THR H 114 N ILE H 12 SHEET 3 AA2 6 ALA H 91 ASP H 98 -1 N TYR H 93 O THR H 111 SHEET 4 AA2 6 TYR H 33 GLN H 39 -1 N ILE H 37 O TYR H 94 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 THR H 57 TYR H 59 -1 O PHE H 58 N VAL H 50 SHEET 1 AA3 4 LEU H 11 ILE H 12 0 SHEET 2 AA3 4 THR H 111 VAL H 115 1 O THR H 114 N ILE H 12 SHEET 3 AA3 4 ALA H 91 ASP H 98 -1 N TYR H 93 O THR H 111 SHEET 4 AA3 4 PHE H 104 TRP H 107 -1 O ILE H 106 N ARG H 97 SHEET 1 AA4 4 SER H 124 LEU H 128 0 SHEET 2 AA4 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AA4 4 TYR H 180 PRO H 189 -1 O VAL H 188 N ALA H 140 SHEET 4 AA4 4 VAL H 167 THR H 169 -1 N HIS H 168 O VAL H 185 SHEET 1 AA5 4 SER H 124 LEU H 128 0 SHEET 2 AA5 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AA5 4 TYR H 180 PRO H 189 -1 O VAL H 188 N ALA H 140 SHEET 4 AA5 4 VAL H 173 LEU H 174 -1 N VAL H 173 O SER H 181 SHEET 1 AA6 3 THR H 155 TRP H 158 0 SHEET 2 AA6 3 ILE H 199 HIS H 204 -1 O ASN H 201 N SER H 157 SHEET 3 AA6 3 THR H 209 LYS H 214 -1 O VAL H 211 N VAL H 202 SHEET 1 AA7 4 LEU L 4 SER L 7 0 SHEET 2 AA7 4 VAL L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 4 GLU L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA7 4 PHE L 62 SER L 65 -1 N SER L 63 O THR L 74 SHEET 1 AA8 6 PHE L 10 ALA L 13 0 SHEET 2 AA8 6 THR L 103 ILE L 107 1 O LYS L 104 N LEU L 11 SHEET 3 AA8 6 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 105 SHEET 4 AA8 6 LEU L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AA8 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AA8 6 THR L 53 LEU L 54 -1 O THR L 53 N TYR L 49 SHEET 1 AA9 4 PHE L 10 ALA L 13 0 SHEET 2 AA9 4 THR L 103 ILE L 107 1 O LYS L 104 N LEU L 11 SHEET 3 AA9 4 ALA L 84 GLN L 90 -1 N ALA L 84 O VAL L 105 SHEET 4 AA9 4 VAL L 98 PHE L 99 -1 O VAL L 98 N GLN L 90 SHEET 1 AB1 4 SER L 115 PHE L 119 0 SHEET 2 AB1 4 THR L 130 PHE L 140 -1 O LEU L 136 N PHE L 117 SHEET 3 AB1 4 TYR L 174 SER L 183 -1 O LEU L 176 N LEU L 137 SHEET 4 AB1 4 SER L 160 VAL L 164 -1 N GLN L 161 O THR L 179 SHEET 1 AB2 4 ALA L 154 GLN L 156 0 SHEET 2 AB2 4 LYS L 146 VAL L 151 -1 N TRP L 149 O GLN L 156 SHEET 3 AB2 4 VAL L 192 THR L 198 -1 O ALA L 194 N LYS L 150 SHEET 4 AB2 4 VAL L 206 ASN L 211 -1 O VAL L 206 N VAL L 197 SHEET 1 AB3 5 ASN E 354 ILE E 358 0 SHEET 2 AB3 5 ASN E 394 ARG E 403 -1 O VAL E 395 N ILE E 358 SHEET 3 AB3 5 PRO E 507 GLU E 516 -1 O VAL E 512 N ASP E 398 SHEET 4 AB3 5 GLY E 431 ASN E 437 -1 N ILE E 434 O VAL E 511 SHEET 5 AB3 5 THR E 376 TYR E 380 -1 N TYR E 380 O GLY E 431 SHEET 1 AB4 3 CYS E 361 ALA E 363 0 SHEET 2 AB4 3 VAL E 524 GLY E 526 1 O CYS E 525 N ALA E 363 SHEET 3 AB4 3 CYS E 391 PHE E 392 -1 N PHE E 392 O VAL E 524 SHEET 1 AB5 2 LEU E 452 ARG E 454 0 SHEET 2 AB5 2 LEU E 492 SER E 494 -1 O GLN E 493 N TYR E 453 SHEET 1 AB6 2 TYR E 473 GLN E 474 0 SHEET 2 AB6 2 CYS E 488 TYR E 489 -1 O TYR E 489 N TYR E 473 SSBOND 1 CYS H 22 CYS H 95 1555 1555 2.04 SSBOND 2 CYS H 144 CYS H 200 1555 1555 2.03 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 4 CYS L 135 CYS L 195 1555 1555 2.04 SSBOND 5 CYS E 336 CYS E 361 1555 1555 2.03 SSBOND 6 CYS E 379 CYS E 432 1555 1555 2.04 SSBOND 7 CYS E 391 CYS E 525 1555 1555 2.04 SSBOND 8 CYS E 480 CYS E 488 1555 1555 2.03 LINK NZ LYS L 45 O2 EDO L 308 1555 1555 1.30 LINK ND2 ASN E 343 C1 NAG A 1 1555 1555 1.44 LINK O4 NAG A 1 C1 NAG A 2 1555 1555 1.46 LINK O6 NAG A 1 C1 FUC A 3 1555 1555 1.44 CISPEP 1 PHE H 150 PRO H 151 0 -5.91 CISPEP 2 GLU H 152 PRO H 153 0 -1.66 CISPEP 3 SER L 7 PRO L 8 0 -6.88 CISPEP 4 TYR L 94 PRO L 95 0 3.93 CISPEP 5 TYR L 141 PRO L 142 0 2.76 CRYST1 82.812 149.712 145.906 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012076 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006679 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006854 0.00000