HEADER TRANSFERASE 22-FEB-21 7NLQ TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ARGB IN COMPLEX WITH TITLE 2 2-(ISOXAZOL-5-YL)PHENOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYLGLUTAMATE KINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: N-ACETYL-L-GLUTAMATE 5-PHOSPHOTRANSFERASE,NAG KINASE,NAGK; COMPND 5 EC: 2.7.2.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 GENE: ARGB, RV1654, MTCY06H11.19; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ARGB ACETYLGLUTAMATE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.MENDES,S.E.THOMAS,J.CORY-WRIGHT,T.L.BLUNDELL REVDAT 2 31-JAN-24 7NLQ 1 REMARK REVDAT 1 30-JUN-21 7NLQ 0 JRNL AUTH P.GUPTA,S.E.THOMAS,S.A.ZAIDAN,M.A.PASILLAS,J.CORY-WRIGHT, JRNL AUTH 2 V.SEBASTIAN-PEREZ,A.BURGESS,E.CATTERMOLE,C.MEGHIR,C.ABELL, JRNL AUTH 3 A.G.COYNE,W.R.JACOBS,T.L.BLUNDELL,S.TIWARI,V.MENDES JRNL TITL A FRAGMENT-BASED APPROACH TO ASSESS THE LIGANDABILITY OF JRNL TITL 2 ARGB, ARGC, ARGD AND ARGF IN THE L-ARGININE BIOSYNTHETIC JRNL TITL 3 PATHWAY OF MYCOBACTERIUM TUBERCULOSIS JRNL REF COMPUT STRUCT BIOTECHNOL J V. 19 3491 2021 JRNL REFN ESSN 2001-0370 JRNL DOI 10.1016/J.CSBJ.2021.06.006 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 14873 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.2640 - 4.2650 1.00 2896 144 0.1551 0.1820 REMARK 3 2 4.2650 - 3.3875 1.00 2831 153 0.1859 0.2204 REMARK 3 3 3.3875 - 2.9600 1.00 2798 153 0.2401 0.2916 REMARK 3 4 2.9600 - 2.6897 1.00 2816 149 0.2505 0.3381 REMARK 3 5 2.6897 - 2.4970 0.99 2782 151 0.2607 0.3029 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 69.51 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2158 REMARK 3 ANGLE : 0.973 2947 REMARK 3 CHIRALITY : 0.062 364 REMARK 3 PLANARITY : 0.006 379 REMARK 3 DIHEDRAL : 16.528 1266 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.7628 3.2123 34.1442 REMARK 3 T TENSOR REMARK 3 T11: 0.6090 T22: 0.6626 REMARK 3 T33: 0.7766 T12: -0.0309 REMARK 3 T13: 0.1607 T23: 0.0805 REMARK 3 L TENSOR REMARK 3 L11: 9.7672 L22: 3.9008 REMARK 3 L33: 9.1691 L12: 1.0184 REMARK 3 L13: 5.9961 L23: 1.6947 REMARK 3 S TENSOR REMARK 3 S11: 0.0594 S12: 0.5460 S13: 0.7436 REMARK 3 S21: -0.2390 S22: 0.0213 S23: -0.3036 REMARK 3 S31: -0.1184 S32: 1.0223 S33: -0.0266 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.6943 -15.9044 29.4347 REMARK 3 T TENSOR REMARK 3 T11: 0.7287 T22: 0.7092 REMARK 3 T33: 0.5558 T12: 0.1305 REMARK 3 T13: 0.1544 T23: 0.1370 REMARK 3 L TENSOR REMARK 3 L11: 5.6495 L22: 1.8813 REMARK 3 L33: 4.8074 L12: 3.0361 REMARK 3 L13: 1.3164 L23: 1.2231 REMARK 3 S TENSOR REMARK 3 S11: 0.3543 S12: 0.0963 S13: 0.0742 REMARK 3 S21: -0.5331 S22: -0.2244 S23: -0.5473 REMARK 3 S31: 0.4797 S32: 0.8043 S33: -0.1611 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.5321 -12.9884 37.4085 REMARK 3 T TENSOR REMARK 3 T11: 0.5937 T22: 0.6087 REMARK 3 T33: 0.7289 T12: 0.0514 REMARK 3 T13: -0.0021 T23: 0.1229 REMARK 3 L TENSOR REMARK 3 L11: 5.7264 L22: 6.5752 REMARK 3 L33: 5.0910 L12: 0.5431 REMARK 3 L13: 0.8980 L23: 2.4821 REMARK 3 S TENSOR REMARK 3 S11: 0.2590 S12: -0.4295 S13: -0.0180 REMARK 3 S21: 0.7786 S22: -0.4412 S23: 0.3059 REMARK 3 S31: -0.1151 S32: 0.3369 S33: 0.1529 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2763 -34.2964 26.1145 REMARK 3 T TENSOR REMARK 3 T11: 0.6224 T22: 0.6651 REMARK 3 T33: 0.4820 T12: 0.1386 REMARK 3 T13: 0.0581 T23: -0.0219 REMARK 3 L TENSOR REMARK 3 L11: 1.9287 L22: 5.2851 REMARK 3 L33: 1.4851 L12: -0.1477 REMARK 3 L13: 0.7405 L23: -0.7612 REMARK 3 S TENSOR REMARK 3 S11: 0.0647 S12: 0.4408 S13: -0.0381 REMARK 3 S21: -0.1582 S22: -0.1402 S23: -0.2050 REMARK 3 S31: 0.5035 S32: 0.1569 S33: 0.0469 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 95 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1744 -28.7962 35.1677 REMARK 3 T TENSOR REMARK 3 T11: 0.6894 T22: 0.5248 REMARK 3 T33: 0.4854 T12: 0.1248 REMARK 3 T13: 0.0215 T23: 0.0942 REMARK 3 L TENSOR REMARK 3 L11: 1.5685 L22: 4.1460 REMARK 3 L33: 7.6287 L12: 1.6838 REMARK 3 L13: 2.1328 L23: 5.6685 REMARK 3 S TENSOR REMARK 3 S11: -0.2034 S12: 0.1929 S13: 0.2025 REMARK 3 S21: 0.8386 S22: -0.1176 S23: 0.4631 REMARK 3 S31: 0.4237 S32: 0.2327 S33: 0.1577 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 121 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1795 -22.6643 23.0357 REMARK 3 T TENSOR REMARK 3 T11: 0.6347 T22: 0.6469 REMARK 3 T33: 0.5404 T12: 0.1884 REMARK 3 T13: 0.0268 T23: 0.0943 REMARK 3 L TENSOR REMARK 3 L11: 1.9420 L22: 3.8562 REMARK 3 L33: 1.8826 L12: 1.1310 REMARK 3 L13: 0.7212 L23: 0.3987 REMARK 3 S TENSOR REMARK 3 S11: -0.0383 S12: 0.5375 S13: 0.2453 REMARK 3 S21: -0.4483 S22: 0.0161 S23: 0.2576 REMARK 3 S31: 0.1199 S32: 0.0841 S33: -0.0096 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 214 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.8275 -13.8613 16.6634 REMARK 3 T TENSOR REMARK 3 T11: 0.8340 T22: 0.8201 REMARK 3 T33: 0.7954 T12: 0.1211 REMARK 3 T13: 0.1086 T23: 0.1610 REMARK 3 L TENSOR REMARK 3 L11: 2.6221 L22: 1.5991 REMARK 3 L33: 4.5985 L12: 0.7476 REMARK 3 L13: -0.2552 L23: 1.3677 REMARK 3 S TENSOR REMARK 3 S11: -0.0654 S12: 0.5444 S13: -0.0380 REMARK 3 S21: -0.4305 S22: 0.1133 S23: -0.4460 REMARK 3 S31: 0.0028 S32: 0.6675 S33: -0.0197 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7NLQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1292114242. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.31 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14890 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.497 REMARK 200 RESOLUTION RANGE LOW (A) : 65.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.600 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 8.80 REMARK 200 R MERGE FOR SHELL (I) : 0.89700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.0 REMARK 200 STARTING MODEL: 2AP9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1260 MM AMMONIUM SULPHATE 100 MM CHES REMARK 280 PH 9.5 200 MM NACL, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 87.46300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.49679 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 24.30267 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 87.46300 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 50.49679 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 24.30267 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 87.46300 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 50.49679 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 24.30267 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 87.46300 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 50.49679 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 24.30267 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 87.46300 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 50.49679 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 24.30267 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 87.46300 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 50.49679 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 24.30267 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 100.99357 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 48.60533 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 100.99357 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 48.60533 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 100.99357 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 48.60533 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 100.99357 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 48.60533 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 100.99357 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 48.60533 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 100.99357 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 48.60533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 65010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -242.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 72.90800 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 72.90800 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 72.90800 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C07 97T A 301 LIES ON A SPECIAL POSITION. REMARK 375 S SO4 A 302 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 SER A 2 REMARK 465 ARG A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 4 CG1 CG2 CD1 REMARK 470 GLU A 5 CG CD OE1 OE2 REMARK 470 ARG A 57 CZ NH1 NH2 REMARK 470 ARG A 140 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 144 CG1 CG2 REMARK 470 ASP A 145 CG OD1 OD2 REMARK 470 ARG A 225 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 239 CG CD OE1 NE2 REMARK 470 GLU A 245 CD OE1 OE2 REMARK 470 ARG A 257 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 290 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 108 -61.96 -129.31 REMARK 500 ALA A 132 19.40 49.61 REMARK 500 ASP A 145 -73.31 66.19 REMARK 500 PRO A 223 40.50 -104.32 REMARK 500 ILE A 232 149.66 -171.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 97T A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 DBREF 7NLQ A 2 294 UNP P9WQ01 ARGB_MYCTU 2 294 SEQADV 7NLQ GLY A -2 UNP P9WQ01 EXPRESSION TAG SEQADV 7NLQ SER A -1 UNP P9WQ01 EXPRESSION TAG SEQADV 7NLQ MET A 0 UNP P9WQ01 EXPRESSION TAG SEQADV 7NLQ VAL A 1 UNP P9WQ01 EXPRESSION TAG SEQRES 1 A 297 GLY SER MET VAL SER ARG ILE GLU ALA LEU PRO THR HIS SEQRES 2 A 297 ILE LYS ALA GLN VAL LEU ALA GLU ALA LEU PRO TRP LEU SEQRES 3 A 297 LYS GLN LEU HIS GLY LYS VAL VAL VAL VAL LYS TYR GLY SEQRES 4 A 297 GLY ASN ALA MET THR ASP ASP THR LEU ARG ARG ALA PHE SEQRES 5 A 297 ALA ALA ASP MET ALA PHE LEU ARG ASN CYS GLY ILE HIS SEQRES 6 A 297 PRO VAL VAL VAL HIS GLY GLY GLY PRO GLN ILE THR ALA SEQRES 7 A 297 MET LEU ARG ARG LEU GLY ILE GLU GLY ASP PHE LYS GLY SEQRES 8 A 297 GLY PHE ARG VAL THR THR PRO GLU VAL LEU ASP VAL ALA SEQRES 9 A 297 ARG MET VAL LEU PHE GLY GLN VAL GLY ARG GLU LEU VAL SEQRES 10 A 297 ASN LEU ILE ASN ALA HIS GLY PRO TYR ALA VAL GLY ILE SEQRES 11 A 297 THR GLY GLU ASP ALA GLN LEU PHE THR ALA VAL ARG ARG SEQRES 12 A 297 SER VAL THR VAL ASP GLY VAL ALA THR ASP ILE GLY LEU SEQRES 13 A 297 VAL GLY ASP VAL ASP GLN VAL ASN THR ALA ALA MET LEU SEQRES 14 A 297 ASP LEU VAL ALA ALA GLY ARG ILE PRO VAL VAL SER THR SEQRES 15 A 297 LEU ALA PRO ASP ALA ASP GLY VAL VAL HIS ASN ILE ASN SEQRES 16 A 297 ALA ASP THR ALA ALA ALA ALA VAL ALA GLU ALA LEU GLY SEQRES 17 A 297 ALA GLU LYS LEU LEU MET LEU THR ASP ILE ASP GLY LEU SEQRES 18 A 297 TYR THR ARG TRP PRO ASP ARG ASP SER LEU VAL SER GLU SEQRES 19 A 297 ILE ASP THR GLY THR LEU ALA GLN LEU LEU PRO THR LEU SEQRES 20 A 297 GLU SER GLY MET VAL PRO LYS VAL GLU ALA CYS LEU ARG SEQRES 21 A 297 ALA VAL ILE GLY GLY VAL PRO SER ALA HIS ILE ILE ASP SEQRES 22 A 297 GLY ARG VAL THR HIS CYS VAL LEU VAL GLU LEU PHE THR SEQRES 23 A 297 ASP ALA GLY THR GLY THR LYS VAL VAL ARG GLY HET 97T A 301 12 HET SO4 A 302 5 HET SO4 A 303 5 HETNAM 97T 2-(1,2-OXAZOL-5-YL)PHENOL HETNAM SO4 SULFATE ION FORMUL 2 97T C9 H7 N O2 FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *6(H2 O) HELIX 1 AA1 PRO A 8 GLU A 18 1 11 HELIX 2 AA2 ALA A 19 HIS A 27 1 9 HELIX 3 AA3 GLY A 37 ASP A 42 1 6 HELIX 4 AA4 ASP A 42 ASN A 58 1 17 HELIX 5 AA5 GLY A 69 LEU A 80 1 12 HELIX 6 AA6 THR A 94 GLN A 108 1 15 HELIX 7 AA7 GLN A 108 ASN A 118 1 11 HELIX 8 AA8 GLU A 130 GLN A 133 5 4 HELIX 9 AA9 ASN A 161 ALA A 171 1 11 HELIX 10 AB1 ASN A 192 GLY A 205 1 14 HELIX 11 AB2 THR A 234 LEU A 241 1 8 HELIX 12 AB3 PRO A 242 LEU A 244 5 3 HELIX 13 AB4 MET A 248 GLY A 261 1 14 HELIX 14 AB5 HIS A 275 THR A 283 1 9 SHEET 1 AA1 8 ALA A 124 ILE A 127 0 SHEET 2 AA1 8 ILE A 174 SER A 178 1 O VAL A 176 N VAL A 125 SHEET 3 AA1 8 HIS A 62 HIS A 67 1 N VAL A 65 O VAL A 177 SHEET 4 AA1 8 VAL A 30 TYR A 35 1 N VAL A 33 O VAL A 64 SHEET 5 AA1 8 LYS A 208 THR A 213 1 O LEU A 210 N LYS A 34 SHEET 6 AA1 8 SER A 265 ASP A 270 1 O HIS A 267 N LEU A 209 SHEET 7 AA1 8 THR A 289 VAL A 292 -1 O VAL A 291 N ALA A 266 SHEET 8 AA1 8 GLU A 231 ASP A 233 1 N ILE A 232 O VAL A 292 SHEET 1 AA2 2 PHE A 86 LYS A 87 0 SHEET 2 AA2 2 PHE A 90 ARG A 91 -1 O PHE A 90 N LYS A 87 SHEET 1 AA3 4 PHE A 135 ARG A 139 0 SHEET 2 AA3 4 VAL A 154 VAL A 160 -1 O ASP A 158 N THR A 136 SHEET 3 AA3 4 VAL A 188 ILE A 191 1 O ASN A 190 N GLY A 155 SHEET 4 AA3 4 LEU A 180 PRO A 182 -1 N ALA A 181 O HIS A 189 SHEET 1 AA4 2 VAL A 142 VAL A 144 0 SHEET 2 AA4 2 VAL A 147 THR A 149 -1 O THR A 149 N VAL A 142 CISPEP 1 TRP A 222 PRO A 223 0 2.91 SITE 1 AC1 3 VAL A 125 ILE A 127 LEU A 168 SITE 1 AC2 3 ARG A 78 PHE A 86 ARG A 91 SITE 1 AC3 4 TRP A 22 GLN A 25 LYS A 208 LYS A 290 CRYST1 174.926 174.926 72.908 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005717 0.003301 0.000000 0.00000 SCALE2 0.000000 0.006601 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013716 0.00000