HEADER TRANSFERASE 22-FEB-21 7NLT TITLE CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ARGB IN COMPLEX WITH TITLE 2 4-(4-METHYLPIPERAZIN-1-YL)BENZOIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYLGLUTAMATE KINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: N-ACETYL-L-GLUTAMATE 5-PHOSPHOTRANSFERASE,NAG KINASE,NAGK; COMPND 5 EC: 2.7.2.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV; SOURCE 3 ORGANISM_TAXID: 83332; SOURCE 4 GENE: ARGB, RV1654, MTCY06H11.19; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ARGB ACETYLGLUTAMATE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.MENDES,S.E.THOMAS,J.CORY-WRIGHT,T.L.BLUNDELL REVDAT 2 31-JAN-24 7NLT 1 REMARK REVDAT 1 30-JUN-21 7NLT 0 JRNL AUTH P.GUPTA,S.E.THOMAS,S.A.ZAIDAN,M.A.PASILLAS,J.CORY-WRIGHT, JRNL AUTH 2 V.SEBASTIAN-PEREZ,A.BURGESS,E.CATTERMOLE,C.MEGHIR,C.ABELL, JRNL AUTH 3 A.G.COYNE,W.R.JACOBS,T.L.BLUNDELL,S.TIWARI,V.MENDES JRNL TITL A FRAGMENT-BASED APPROACH TO ASSESS THE LIGANDABILITY OF JRNL TITL 2 ARGB, ARGC, ARGD AND ARGF IN THE L-ARGININE BIOSYNTHETIC JRNL TITL 3 PATHWAY OF MYCOBACTERIUM TUBERCULOSIS JRNL REF COMPUT STRUCT BIOTECHNOL J V. 19 3491 2021 JRNL REFN ESSN 2001-0370 JRNL DOI 10.1016/J.CSBJ.2021.06.006 REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 20432 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 1000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.1220 - 4.2560 1.00 2850 137 0.1517 0.2100 REMARK 3 2 4.2560 - 3.3784 1.00 2794 150 0.1858 0.2540 REMARK 3 3 3.3784 - 2.9514 1.00 2759 148 0.2414 0.3152 REMARK 3 4 2.9514 - 2.6815 1.00 2769 141 0.2339 0.2896 REMARK 3 5 2.6815 - 2.4893 1.00 2767 138 0.2466 0.3092 REMARK 3 6 2.4893 - 2.3426 1.00 2759 129 0.2543 0.2837 REMARK 3 7 2.3426 - 2.2253 1.00 2734 157 0.2802 0.3221 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2189 REMARK 3 ANGLE : 0.982 2987 REMARK 3 CHIRALITY : 0.065 365 REMARK 3 PLANARITY : 0.006 385 REMARK 3 DIHEDRAL : 17.049 1293 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.8882 3.0611 34.0415 REMARK 3 T TENSOR REMARK 3 T11: 0.6046 T22: 0.7884 REMARK 3 T33: 0.8427 T12: -0.0767 REMARK 3 T13: 0.0973 T23: 0.0667 REMARK 3 L TENSOR REMARK 3 L11: 3.2926 L22: 4.2750 REMARK 3 L33: 8.2834 L12: -0.4274 REMARK 3 L13: 5.0238 L23: 0.6477 REMARK 3 S TENSOR REMARK 3 S11: 0.4596 S12: 0.4187 S13: 0.9283 REMARK 3 S21: -0.0282 S22: -0.2593 S23: -0.4281 REMARK 3 S31: 0.1765 S32: 1.1842 S33: -0.1197 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.4911 -14.1852 33.4368 REMARK 3 T TENSOR REMARK 3 T11: 0.5973 T22: 0.5160 REMARK 3 T33: 0.7345 T12: 0.1132 REMARK 3 T13: 0.0707 T23: 0.1287 REMARK 3 L TENSOR REMARK 3 L11: 4.1730 L22: 3.5658 REMARK 3 L33: 4.7191 L12: 2.2741 REMARK 3 L13: 1.7950 L23: 0.1174 REMARK 3 S TENSOR REMARK 3 S11: 0.1953 S12: 0.0108 S13: 0.2602 REMARK 3 S21: -0.0173 S22: -0.2571 S23: -0.5784 REMARK 3 S31: 0.3632 S32: 0.6212 S33: 0.0582 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.1564 -34.0154 25.8232 REMARK 3 T TENSOR REMARK 3 T11: 0.6977 T22: 0.6300 REMARK 3 T33: 0.5355 T12: 0.1606 REMARK 3 T13: 0.0646 T23: 0.0197 REMARK 3 L TENSOR REMARK 3 L11: 2.2013 L22: 1.4771 REMARK 3 L33: 0.2340 L12: -0.3313 REMARK 3 L13: 0.6472 L23: -0.6111 REMARK 3 S TENSOR REMARK 3 S11: 0.1405 S12: 0.4577 S13: -0.0585 REMARK 3 S21: -0.3473 S22: -0.1685 S23: 0.0048 REMARK 3 S31: 0.1281 S32: 0.1650 S33: -0.0046 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 95 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0674 -28.5907 34.7628 REMARK 3 T TENSOR REMARK 3 T11: 0.7038 T22: 0.5447 REMARK 3 T33: 0.6222 T12: 0.1305 REMARK 3 T13: -0.0226 T23: 0.0545 REMARK 3 L TENSOR REMARK 3 L11: 0.4503 L22: 3.3977 REMARK 3 L33: 5.6343 L12: 0.0731 REMARK 3 L13: 0.0126 L23: 4.3958 REMARK 3 S TENSOR REMARK 3 S11: 0.0262 S12: 0.0320 S13: -0.1305 REMARK 3 S21: 0.7754 S22: -0.1874 S23: -0.2364 REMARK 3 S31: 0.3346 S32: 0.0124 S33: 0.0267 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 121 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6310 -22.5157 28.7040 REMARK 3 T TENSOR REMARK 3 T11: 0.7251 T22: 0.5119 REMARK 3 T33: 0.6901 T12: 0.1216 REMARK 3 T13: 0.0759 T23: 0.0635 REMARK 3 L TENSOR REMARK 3 L11: 2.5077 L22: 0.7024 REMARK 3 L33: 4.2005 L12: 1.1931 REMARK 3 L13: 1.0689 L23: 0.8810 REMARK 3 S TENSOR REMARK 3 S11: 0.2500 S12: 0.2308 S13: 0.3672 REMARK 3 S21: 0.0649 S22: -0.1793 S23: -0.0411 REMARK 3 S31: 0.2154 S32: -0.1827 S33: -0.0138 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.9525 -31.0715 13.0740 REMARK 3 T TENSOR REMARK 3 T11: 0.9861 T22: 1.0194 REMARK 3 T33: 0.6960 T12: 0.3098 REMARK 3 T13: 0.0789 T23: 0.0945 REMARK 3 L TENSOR REMARK 3 L11: 1.5466 L22: 5.1042 REMARK 3 L33: 5.3108 L12: 0.4891 REMARK 3 L13: 2.9116 L23: 0.4702 REMARK 3 S TENSOR REMARK 3 S11: 0.8950 S12: 1.2472 S13: -0.5072 REMARK 3 S21: -2.0584 S22: -1.1811 S23: 0.5163 REMARK 3 S31: -0.2677 S32: -0.1353 S33: 0.1348 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 162 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8862 -18.8046 24.4175 REMARK 3 T TENSOR REMARK 3 T11: 0.6525 T22: 0.6046 REMARK 3 T33: 0.6693 T12: 0.1971 REMARK 3 T13: 0.0768 T23: 0.0860 REMARK 3 L TENSOR REMARK 3 L11: 1.3063 L22: 4.4815 REMARK 3 L33: 1.5218 L12: 1.8961 REMARK 3 L13: 0.3618 L23: -0.4913 REMARK 3 S TENSOR REMARK 3 S11: -0.0927 S12: 0.3709 S13: 0.4903 REMARK 3 S21: 0.1029 S22: 0.1293 S23: 0.5094 REMARK 3 S31: -0.1220 S32: -0.0095 S33: 0.0045 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 214 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.2859 -16.2433 14.1991 REMARK 3 T TENSOR REMARK 3 T11: 0.9249 T22: 1.2189 REMARK 3 T33: 1.2813 T12: 0.1492 REMARK 3 T13: 0.1029 T23: 0.0607 REMARK 3 L TENSOR REMARK 3 L11: 7.9061 L22: 5.8746 REMARK 3 L33: 2.8955 L12: -3.4682 REMARK 3 L13: 2.0409 L23: 0.9685 REMARK 3 S TENSOR REMARK 3 S11: -0.0806 S12: 1.3632 S13: -0.1950 REMARK 3 S21: 0.4541 S22: -0.4650 S23: -0.8759 REMARK 3 S31: -0.3586 S32: 0.7237 S33: 0.1553 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 231 THROUGH 245 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.6482 -15.7015 7.4255 REMARK 3 T TENSOR REMARK 3 T11: 1.4740 T22: 1.1405 REMARK 3 T33: 0.8053 T12: 0.0921 REMARK 3 T13: 0.3611 T23: 0.1375 REMARK 3 L TENSOR REMARK 3 L11: 5.7988 L22: 4.9081 REMARK 3 L33: 2.3082 L12: -2.1087 REMARK 3 L13: 1.2486 L23: 1.5001 REMARK 3 S TENSOR REMARK 3 S11: -0.1607 S12: 1.1354 S13: -0.2837 REMARK 3 S21: -1.1349 S22: -0.4782 S23: -0.5821 REMARK 3 S31: 0.2681 S32: 1.4626 S33: 0.6373 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 246 THROUGH 260 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5937 -18.5791 13.5000 REMARK 3 T TENSOR REMARK 3 T11: 1.1252 T22: 0.7741 REMARK 3 T33: 0.8475 T12: 0.0758 REMARK 3 T13: 0.1498 T23: 0.0261 REMARK 3 L TENSOR REMARK 3 L11: 7.8959 L22: 2.4676 REMARK 3 L33: 8.2284 L12: -3.9714 REMARK 3 L13: 0.9221 L23: -2.1784 REMARK 3 S TENSOR REMARK 3 S11: 0.2359 S12: 0.4597 S13: -0.6875 REMARK 3 S21: -1.8166 S22: 0.0799 S23: -0.2299 REMARK 3 S31: 1.4124 S32: 0.4648 S33: -0.0074 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 261 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.9670 -9.2848 22.7454 REMARK 3 T TENSOR REMARK 3 T11: 0.7616 T22: 0.6866 REMARK 3 T33: 0.8747 T12: 0.1119 REMARK 3 T13: 0.0883 T23: 0.1755 REMARK 3 L TENSOR REMARK 3 L11: 1.9241 L22: 2.3049 REMARK 3 L33: 5.4906 L12: 0.4735 REMARK 3 L13: 0.4714 L23: 1.1326 REMARK 3 S TENSOR REMARK 3 S11: 0.0308 S12: 0.3375 S13: 0.2845 REMARK 3 S21: -0.4003 S22: 0.0753 S23: -0.0313 REMARK 3 S31: -0.0657 S32: 0.8784 S33: -0.0400 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7NLT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-FEB-21. REMARK 100 THE DEPOSITION ID IS D_1292114245. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20440 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.225 REMARK 200 RESOLUTION RANGE LOW (A) : 50.122 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.40 REMARK 200 R MERGE FOR SHELL (I) : 1.00500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.0 REMARK 200 STARTING MODEL: 2AP9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1260 MM AMMONIUM SULPHATE 100 MM CHES REMARK 280 PH 9.5 200 MM NACL, VAPOR DIFFUSION, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 86.81350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.12180 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 23.99733 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 86.81350 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 50.12180 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 23.99733 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 86.81350 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 50.12180 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 23.99733 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 86.81350 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 50.12180 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 23.99733 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 86.81350 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 50.12180 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 23.99733 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 86.81350 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 50.12180 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 23.99733 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 100.24360 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 47.99467 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 100.24360 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 47.99467 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 100.24360 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 47.99467 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 100.24360 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 47.99467 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 100.24360 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 47.99467 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 100.24360 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 47.99467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 63450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -234.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 71.99200 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 71.99200 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 71.99200 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 303 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 SER A 2 REMARK 465 ARG A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 4 CG1 CG2 CD1 REMARK 470 ASP A 145 CG OD1 OD2 REMARK 470 ARG A 225 CG CD NE CZ NH1 NH2 REMARK 470 SER A 246 OG REMARK 470 ARG A 257 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 290 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 62 79.45 -109.51 REMARK 500 GLN A 108 -65.11 -133.37 REMARK 500 ASN A 118 2.58 -68.65 REMARK 500 ASP A 158 -81.05 -88.54 REMARK 500 ALA A 285 30.50 -89.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 14N A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 DBREF 7NLT A 2 294 UNP P9WQ01 ARGB_MYCTU 2 294 SEQADV 7NLT GLY A -2 UNP P9WQ01 EXPRESSION TAG SEQADV 7NLT SER A -1 UNP P9WQ01 EXPRESSION TAG SEQADV 7NLT MET A 0 UNP P9WQ01 EXPRESSION TAG SEQADV 7NLT VAL A 1 UNP P9WQ01 EXPRESSION TAG SEQRES 1 A 297 GLY SER MET VAL SER ARG ILE GLU ALA LEU PRO THR HIS SEQRES 2 A 297 ILE LYS ALA GLN VAL LEU ALA GLU ALA LEU PRO TRP LEU SEQRES 3 A 297 LYS GLN LEU HIS GLY LYS VAL VAL VAL VAL LYS TYR GLY SEQRES 4 A 297 GLY ASN ALA MET THR ASP ASP THR LEU ARG ARG ALA PHE SEQRES 5 A 297 ALA ALA ASP MET ALA PHE LEU ARG ASN CYS GLY ILE HIS SEQRES 6 A 297 PRO VAL VAL VAL HIS GLY GLY GLY PRO GLN ILE THR ALA SEQRES 7 A 297 MET LEU ARG ARG LEU GLY ILE GLU GLY ASP PHE LYS GLY SEQRES 8 A 297 GLY PHE ARG VAL THR THR PRO GLU VAL LEU ASP VAL ALA SEQRES 9 A 297 ARG MET VAL LEU PHE GLY GLN VAL GLY ARG GLU LEU VAL SEQRES 10 A 297 ASN LEU ILE ASN ALA HIS GLY PRO TYR ALA VAL GLY ILE SEQRES 11 A 297 THR GLY GLU ASP ALA GLN LEU PHE THR ALA VAL ARG ARG SEQRES 12 A 297 SER VAL THR VAL ASP GLY VAL ALA THR ASP ILE GLY LEU SEQRES 13 A 297 VAL GLY ASP VAL ASP GLN VAL ASN THR ALA ALA MET LEU SEQRES 14 A 297 ASP LEU VAL ALA ALA GLY ARG ILE PRO VAL VAL SER THR SEQRES 15 A 297 LEU ALA PRO ASP ALA ASP GLY VAL VAL HIS ASN ILE ASN SEQRES 16 A 297 ALA ASP THR ALA ALA ALA ALA VAL ALA GLU ALA LEU GLY SEQRES 17 A 297 ALA GLU LYS LEU LEU MET LEU THR ASP ILE ASP GLY LEU SEQRES 18 A 297 TYR THR ARG TRP PRO ASP ARG ASP SER LEU VAL SER GLU SEQRES 19 A 297 ILE ASP THR GLY THR LEU ALA GLN LEU LEU PRO THR LEU SEQRES 20 A 297 GLU SER GLY MET VAL PRO LYS VAL GLU ALA CYS LEU ARG SEQRES 21 A 297 ALA VAL ILE GLY GLY VAL PRO SER ALA HIS ILE ILE ASP SEQRES 22 A 297 GLY ARG VAL THR HIS CYS VAL LEU VAL GLU LEU PHE THR SEQRES 23 A 297 ASP ALA GLY THR GLY THR LYS VAL VAL ARG GLY HET 14N A 301 16 HET SO4 A 302 5 HET SO4 A 303 5 HETNAM 14N 4-(4-METHYLPIPERAZIN-1-YL)BENZOIC ACID HETNAM SO4 SULFATE ION FORMUL 2 14N C12 H16 N2 O2 FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *16(H2 O) HELIX 1 AA1 PRO A 8 GLU A 18 1 11 HELIX 2 AA2 ALA A 19 HIS A 27 1 9 HELIX 3 AA3 GLY A 36 THR A 41 5 6 HELIX 4 AA4 ASP A 42 CYS A 59 1 18 HELIX 5 AA5 GLY A 69 LEU A 80 1 12 HELIX 6 AA6 THR A 94 GLN A 108 1 15 HELIX 7 AA7 GLN A 108 ASN A 118 1 11 HELIX 8 AA8 GLU A 130 GLN A 133 5 4 HELIX 9 AA9 ASN A 161 ALA A 171 1 11 HELIX 10 AB1 ASN A 192 LEU A 204 1 13 HELIX 11 AB2 ASP A 224 LEU A 228 5 5 HELIX 12 AB3 THR A 234 LEU A 241 1 8 HELIX 13 AB4 PRO A 242 LEU A 244 5 3 HELIX 14 AB5 GLY A 247 GLY A 261 1 15 HELIX 15 AB6 HIS A 275 THR A 283 1 9 SHEET 1 AA1 8 ALA A 124 ILE A 127 0 SHEET 2 AA1 8 ILE A 174 SER A 178 1 O SER A 178 N ILE A 127 SHEET 3 AA1 8 HIS A 62 HIS A 67 1 N VAL A 65 O VAL A 177 SHEET 4 AA1 8 VAL A 30 TYR A 35 1 N VAL A 33 O VAL A 64 SHEET 5 AA1 8 LYS A 208 THR A 213 1 O LEU A 210 N LYS A 34 SHEET 6 AA1 8 SER A 265 ASP A 270 1 O HIS A 267 N MET A 211 SHEET 7 AA1 8 THR A 289 VAL A 292 -1 O VAL A 291 N ALA A 266 SHEET 8 AA1 8 GLU A 231 ASP A 233 1 N ILE A 232 O LYS A 290 SHEET 1 AA2 2 PHE A 86 LYS A 87 0 SHEET 2 AA2 2 PHE A 90 ARG A 91 -1 O PHE A 90 N LYS A 87 SHEET 1 AA3 4 PHE A 135 ARG A 139 0 SHEET 2 AA3 4 VAL A 154 VAL A 160 -1 O ASP A 158 N THR A 136 SHEET 3 AA3 4 VAL A 188 ILE A 191 1 O ASN A 190 N GLY A 155 SHEET 4 AA3 4 LEU A 180 PRO A 182 -1 N ALA A 181 O HIS A 189 SHEET 1 AA4 2 VAL A 142 VAL A 144 0 SHEET 2 AA4 2 VAL A 147 THR A 149 -1 O VAL A 147 N VAL A 144 CISPEP 1 TRP A 222 PRO A 223 0 4.97 SITE 1 AC1 6 VAL A 125 ASP A 131 ALA A 132 LEU A 134 SITE 2 AC1 6 LEU A 168 ARG A 173 SITE 1 AC2 3 TRP A 22 LYS A 208 LYS A 290 SITE 1 AC3 2 ARG A 78 PHE A 86 CRYST1 173.627 173.627 71.992 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005759 0.003325 0.000000 0.00000 SCALE2 0.000000 0.006650 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013890 0.00000