data_7NQ8 # _entry.id 7NQ8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.341 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7NQ8 ? ? WWPDB D_1292114417 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Same protein with different ligand' 7NQ5 unspecified PDB 'Same protein with different ligand' 7NQ7 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7NQ8 _pdbx_database_status.recvd_initial_deposition_date 2021-03-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Chung, C.W.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0002-2480-3110 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 64 _citation.language ? _citation.page_first 3249 _citation.page_last 3281 _citation.title ;Template-Hopping Approach Leads to Potent, Selective, and Highly Soluble Bromo and Extraterminal Domain (BET) Second Bromodomain (BD2) Inhibitors. ; _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.0c02156 _citation.pdbx_database_id_PubMed 33662213 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Aylott, H.E.' 1 ? primary 'Atkinson, S.J.' 2 ? primary 'Bamborough, P.' 3 ? primary 'Bassil, A.' 4 ? primary 'Chung, C.W.' 5 ? primary 'Gordon, L.' 6 ? primary 'Grandi, P.' 7 ? primary 'Gray, J.R.J.' 8 ? primary 'Harrison, L.A.' 9 ? primary 'Hayhow, T.G.' 10 ? primary 'Messenger, C.' 11 ? primary 'Mitchell, D.' 12 ? primary 'Phillipou, A.' 13 ? primary 'Preston, A.' 14 ? primary 'Prinjha, R.K.' 15 ? primary 'Rianjongdee, F.' 16 ? primary 'Rioja, I.' 17 ? primary 'Seal, J.T.' 18 ? primary 'Wall, I.D.' 19 ? primary 'Watson, R.J.' 20 ? primary 'Woolven, J.M.' 21 ? primary 'Demont, E.H.' 22 ? # _cell.angle_alpha 90 _cell.angle_alpha_esd ? _cell.angle_beta 90 _cell.angle_beta_esd ? _cell.angle_gamma 90 _cell.angle_gamma_esd ? _cell.entry_id 7NQ8 _cell.details ? _cell.formula_units_Z ? _cell.length_a 71.706 _cell.length_a_esd ? _cell.length_b 52.549 _cell.length_b_esd ? _cell.length_c 32.032 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7NQ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 2' 13432.462 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 3 non-polymer syn 'N-ethyl-3-(1-methyl-1H-1,2,3-triazol-4-yl)-4-(pyridin-2-ylmethoxy)benzamide' 337.376 1 ? ? ? ? 4 water nat water 18.015 214 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'O27.1.1,Really interesting new gene 3 protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSMGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRL MFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD ; _entity_poly.pdbx_seq_one_letter_code_can ;GSMGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRL MFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 GLY n 1 5 LYS n 1 6 LEU n 1 7 SER n 1 8 GLU n 1 9 GLN n 1 10 LEU n 1 11 LYS n 1 12 HIS n 1 13 CYS n 1 14 ASN n 1 15 GLY n 1 16 ILE n 1 17 LEU n 1 18 LYS n 1 19 GLU n 1 20 LEU n 1 21 LEU n 1 22 SER n 1 23 LYS n 1 24 LYS n 1 25 HIS n 1 26 ALA n 1 27 ALA n 1 28 TYR n 1 29 ALA n 1 30 TRP n 1 31 PRO n 1 32 PHE n 1 33 TYR n 1 34 LYS n 1 35 PRO n 1 36 VAL n 1 37 ASP n 1 38 ALA n 1 39 SER n 1 40 ALA n 1 41 LEU n 1 42 GLY n 1 43 LEU n 1 44 HIS n 1 45 ASP n 1 46 TYR n 1 47 HIS n 1 48 ASP n 1 49 ILE n 1 50 ILE n 1 51 LYS n 1 52 HIS n 1 53 PRO n 1 54 MET n 1 55 ASP n 1 56 LEU n 1 57 SER n 1 58 THR n 1 59 VAL n 1 60 LYS n 1 61 ARG n 1 62 LYS n 1 63 MET n 1 64 GLU n 1 65 ASN n 1 66 ARG n 1 67 ASP n 1 68 TYR n 1 69 ARG n 1 70 ASP n 1 71 ALA n 1 72 GLN n 1 73 GLU n 1 74 PHE n 1 75 ALA n 1 76 ALA n 1 77 ASP n 1 78 VAL n 1 79 ARG n 1 80 LEU n 1 81 MET n 1 82 PHE n 1 83 SER n 1 84 ASN n 1 85 CYS n 1 86 TYR n 1 87 LYS n 1 88 TYR n 1 89 ASN n 1 90 PRO n 1 91 PRO n 1 92 ASP n 1 93 HIS n 1 94 ASP n 1 95 VAL n 1 96 VAL n 1 97 ALA n 1 98 MET n 1 99 ALA n 1 100 ARG n 1 101 LYS n 1 102 LEU n 1 103 GLN n 1 104 ASP n 1 105 VAL n 1 106 PHE n 1 107 GLU n 1 108 PHE n 1 109 ARG n 1 110 TYR n 1 111 ALA n 1 112 LYS n 1 113 MET n 1 114 PRO n 1 115 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 115 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRD2, KIAA9001, RING3' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD2_HUMAN _struct_ref.pdbx_db_accession P25440 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFS NCYKYNPPDHDVVAMARKLQDVFEFRYAKMPD ; _struct_ref.pdbx_align_begin 344 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7NQ8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 115 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P25440 _struct_ref_seq.db_align_beg 344 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 455 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 344 _struct_ref_seq.pdbx_auth_seq_align_end 455 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7NQ8 GLY A 1 ? UNP P25440 ? ? 'expression tag' 341 1 1 7NQ8 SER A 2 ? UNP P25440 ? ? 'expression tag' 342 2 1 7NQ8 MET A 3 ? UNP P25440 ? ? 'expression tag' 343 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UM5 non-polymer . 'N-ethyl-3-(1-methyl-1H-1,2,3-triazol-4-yl)-4-(pyridin-2-ylmethoxy)benzamide' '~{N}-ethyl-3-(1-methyl-1,2,3-triazol-4-yl)-4-(pyridin-2-ylmethoxy)benzamide' 'C18 H19 N5 O2' 337.376 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7NQ8 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.25 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% PEG 300, 0.1M MES buffer pH6.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU SATURN A200' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-07-23 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54178 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7NQ8 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.60 _reflns.d_resolution_low 35.85 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15636 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 95.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.8 _reflns.pdbx_Rmerge_I_obs 0.015 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 50.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.69 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 22.1 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1891 _reflns_shell.percent_possible_all 80.8 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.030 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 1.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.970 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 1.5993 _refine.aniso_B[1][2] 0 _refine.aniso_B[1][3] 0 _refine.aniso_B[2][2] 0.4773 _refine.aniso_B[2][3] 0 _refine.aniso_B[3][3] -2.0766 _refine.B_iso_max ? _refine.B_iso_mean 16.65 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.928 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7NQ8 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.602 _refine.ls_d_res_low 29.62 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15589 _refine.ls_number_reflns_R_free 740 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.3 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.175 _refine.ls_R_factor_R_free 0.2049 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1734 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.092 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.103 _refine.pdbx_overall_SU_R_Blow_DPI 0.111 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.094 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 7NQ8 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.19 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.602 _refine_hist.d_res_low 29.62 _refine_hist.number_atoms_solvent 214 _refine_hist.number_atoms_total 1170 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 919 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 37 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 ? 1009 ? t_bond_d 2 HARMONIC 'X-RAY DIFFRACTION' ? 0.89 ? 1355 ? t_angle_deg 2 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 360 ? t_dihedral_angle_d 2 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? 169 ? t_gen_planes 5 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1009 ? t_it 10 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 116 ? t_chiral_improper_torsion 5 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? 1125 ? t_ideal_dist_contact 4 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 4.43 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 15.06 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.602 _refine_ls_shell.d_res_low 1.62 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 18 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.percent_reflns_obs 71.85 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2116 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.1711 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7NQ8 _struct.title 'C-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH N-ethyl-3-(1-methyl-1H-1,2,3-triazol-4-yl)-4-(pyridin-2-ylmethoxy)benzamide' _struct.pdbx_descriptor 'Bromodomain-containing protein 2' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7NQ8 _struct_keywords.text 'INHIBITOR, HISTONE, EPIGENETIC READER, BROMODOMAIN, BRD2, BROMODOMAIN CONTAINING PROTEIN 2, ANTAGONIST, NUCLEAR PROTEIN' _struct_keywords.pdbx_keywords 'NUCLEAR PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 7 ? LEU A 21 ? SER A 347 LEU A 361 1 ? 15 HELX_P HELX_P2 AA2 SER A 22 ? LYS A 24 ? SER A 362 LYS A 364 5 ? 3 HELX_P HELX_P3 AA3 HIS A 25 ? TRP A 30 ? HIS A 365 TRP A 370 1 ? 6 HELX_P HELX_P4 AA4 PRO A 31 ? TYR A 33 ? PRO A 371 TYR A 373 5 ? 3 HELX_P HELX_P5 AA5 ASP A 37 ? GLY A 42 ? ASP A 377 GLY A 382 1 ? 6 HELX_P HELX_P6 AA6 ASP A 45 ? ILE A 50 ? ASP A 385 ILE A 390 1 ? 6 HELX_P HELX_P7 AA7 ASP A 55 ? ASN A 65 ? ASP A 395 ASN A 405 1 ? 11 HELX_P HELX_P8 AA8 ASP A 70 ? ASN A 89 ? ASP A 410 ASN A 429 1 ? 20 HELX_P HELX_P9 AA9 HIS A 93 ? ALA A 111 ? HIS A 433 ALA A 451 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 501 ? 7 'binding site for residue EDO A 501' AC2 Software A EDO 502 ? 7 'binding site for residue EDO A 502' AC3 Software A EDO 503 ? 6 'binding site for residue EDO A 503' AC4 Software A UM5 504 ? 12 'binding site for residue UM5 A 504' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 TYR A 86 ? TYR A 426 . ? 2_655 ? 2 AC1 7 ARG A 100 ? ARG A 440 . ? 2_655 ? 3 AC1 7 GLN A 103 ? GLN A 443 . ? 1_555 ? 4 AC1 7 GLN A 103 ? GLN A 443 . ? 2_655 ? 5 AC1 7 ASP A 104 ? ASP A 444 . ? 1_555 ? 6 AC1 7 PHE A 108 ? PHE A 448 . ? 1_555 ? 7 AC1 7 HOH F . ? HOH A 623 . ? 1_555 ? 8 AC2 7 TYR A 28 ? TYR A 368 . ? 1_554 ? 9 AC2 7 LYS A 62 ? LYS A 402 . ? 1_555 ? 10 AC2 7 ASP A 67 ? ASP A 407 . ? 1_555 ? 11 AC2 7 MET A 98 ? MET A 438 . ? 1_554 ? 12 AC2 7 LYS A 101 ? LYS A 441 . ? 1_554 ? 13 AC2 7 HOH F . ? HOH A 602 . ? 1_555 ? 14 AC2 7 HOH F . ? HOH A 642 . ? 1_555 ? 15 AC3 6 LYS A 5 ? LYS A 345 . ? 4_555 ? 16 AC3 6 LYS A 87 ? LYS A 427 . ? 1_555 ? 17 AC3 6 ASN A 89 ? ASN A 429 . ? 1_555 ? 18 AC3 6 HOH F . ? HOH A 649 . ? 1_555 ? 19 AC3 6 HOH F . ? HOH A 693 . ? 1_555 ? 20 AC3 6 HOH F . ? HOH A 694 . ? 1_555 ? 21 AC4 12 TRP A 30 ? TRP A 370 . ? 1_555 ? 22 AC4 12 PRO A 31 ? PRO A 371 . ? 1_555 ? 23 AC4 12 VAL A 36 ? VAL A 376 . ? 1_555 ? 24 AC4 12 LEU A 43 ? LEU A 383 . ? 1_555 ? 25 AC4 12 TYR A 88 ? TYR A 428 . ? 1_555 ? 26 AC4 12 ASN A 89 ? ASN A 429 . ? 1_555 ? 27 AC4 12 PRO A 90 ? PRO A 430 . ? 1_555 ? 28 AC4 12 VAL A 95 ? VAL A 435 . ? 1_555 ? 29 AC4 12 MET A 98 ? MET A 438 . ? 1_555 ? 30 AC4 12 HOH F . ? HOH A 621 . ? 1_555 ? 31 AC4 12 HOH F . ? HOH A 696 . ? 1_555 ? 32 AC4 12 HOH F . ? HOH A 710 . ? 1_555 ? # _atom_sites.entry_id 7NQ8 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.013946 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019030 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031219 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 341 ? ? ? A . n A 1 2 SER 2 342 ? ? ? A . n A 1 3 MET 3 343 ? ? ? A . n A 1 4 GLY 4 344 ? ? ? A . n A 1 5 LYS 5 345 345 LYS LYS A . n A 1 6 LEU 6 346 346 LEU LEU A . n A 1 7 SER 7 347 347 SER SER A . n A 1 8 GLU 8 348 348 GLU GLU A . n A 1 9 GLN 9 349 349 GLN GLN A . n A 1 10 LEU 10 350 350 LEU LEU A . n A 1 11 LYS 11 351 351 LYS LYS A . n A 1 12 HIS 12 352 352 HIS HIS A . n A 1 13 CYS 13 353 353 CYS CYS A . n A 1 14 ASN 14 354 354 ASN ASN A . n A 1 15 GLY 15 355 355 GLY GLY A . n A 1 16 ILE 16 356 356 ILE ILE A . n A 1 17 LEU 17 357 357 LEU LEU A . n A 1 18 LYS 18 358 358 LYS LYS A . n A 1 19 GLU 19 359 359 GLU GLU A . n A 1 20 LEU 20 360 360 LEU LEU A . n A 1 21 LEU 21 361 361 LEU LEU A . n A 1 22 SER 22 362 362 SER SER A . n A 1 23 LYS 23 363 363 LYS LYS A . n A 1 24 LYS 24 364 364 LYS LYS A . n A 1 25 HIS 25 365 365 HIS HIS A . n A 1 26 ALA 26 366 366 ALA ALA A . n A 1 27 ALA 27 367 367 ALA ALA A . n A 1 28 TYR 28 368 368 TYR TYR A . n A 1 29 ALA 29 369 369 ALA ALA A . n A 1 30 TRP 30 370 370 TRP TRP A . n A 1 31 PRO 31 371 371 PRO PRO A . n A 1 32 PHE 32 372 372 PHE PHE A . n A 1 33 TYR 33 373 373 TYR TYR A . n A 1 34 LYS 34 374 374 LYS LYS A . n A 1 35 PRO 35 375 375 PRO PRO A . n A 1 36 VAL 36 376 376 VAL VAL A . n A 1 37 ASP 37 377 377 ASP ASP A . n A 1 38 ALA 38 378 378 ALA ALA A . n A 1 39 SER 39 379 379 SER SER A . n A 1 40 ALA 40 380 380 ALA ALA A . n A 1 41 LEU 41 381 381 LEU LEU A . n A 1 42 GLY 42 382 382 GLY GLY A . n A 1 43 LEU 43 383 383 LEU LEU A . n A 1 44 HIS 44 384 384 HIS HIS A . n A 1 45 ASP 45 385 385 ASP ASP A . n A 1 46 TYR 46 386 386 TYR TYR A . n A 1 47 HIS 47 387 387 HIS HIS A . n A 1 48 ASP 48 388 388 ASP ASP A . n A 1 49 ILE 49 389 389 ILE ILE A . n A 1 50 ILE 50 390 390 ILE ILE A . n A 1 51 LYS 51 391 391 LYS LYS A . n A 1 52 HIS 52 392 392 HIS HIS A . n A 1 53 PRO 53 393 393 PRO PRO A . n A 1 54 MET 54 394 394 MET MET A . n A 1 55 ASP 55 395 395 ASP ASP A . n A 1 56 LEU 56 396 396 LEU LEU A . n A 1 57 SER 57 397 397 SER SER A . n A 1 58 THR 58 398 398 THR THR A . n A 1 59 VAL 59 399 399 VAL VAL A . n A 1 60 LYS 60 400 400 LYS LYS A . n A 1 61 ARG 61 401 401 ARG ARG A . n A 1 62 LYS 62 402 402 LYS LYS A . n A 1 63 MET 63 403 403 MET MET A . n A 1 64 GLU 64 404 404 GLU GLU A . n A 1 65 ASN 65 405 405 ASN ASN A . n A 1 66 ARG 66 406 406 ARG ARG A . n A 1 67 ASP 67 407 407 ASP ASP A . n A 1 68 TYR 68 408 408 TYR TYR A . n A 1 69 ARG 69 409 409 ARG ARG A . n A 1 70 ASP 70 410 410 ASP ASP A . n A 1 71 ALA 71 411 411 ALA ALA A . n A 1 72 GLN 72 412 412 GLN GLN A . n A 1 73 GLU 73 413 413 GLU GLU A . n A 1 74 PHE 74 414 414 PHE PHE A . n A 1 75 ALA 75 415 415 ALA ALA A . n A 1 76 ALA 76 416 416 ALA ALA A . n A 1 77 ASP 77 417 417 ASP ASP A . n A 1 78 VAL 78 418 418 VAL VAL A . n A 1 79 ARG 79 419 419 ARG ARG A . n A 1 80 LEU 80 420 420 LEU LEU A . n A 1 81 MET 81 421 421 MET MET A . n A 1 82 PHE 82 422 422 PHE PHE A . n A 1 83 SER 83 423 423 SER SER A . n A 1 84 ASN 84 424 424 ASN ASN A . n A 1 85 CYS 85 425 425 CYS CYS A . n A 1 86 TYR 86 426 426 TYR TYR A . n A 1 87 LYS 87 427 427 LYS LYS A . n A 1 88 TYR 88 428 428 TYR TYR A . n A 1 89 ASN 89 429 429 ASN ASN A . n A 1 90 PRO 90 430 430 PRO PRO A . n A 1 91 PRO 91 431 431 PRO PRO A . n A 1 92 ASP 92 432 432 ASP ASP A . n A 1 93 HIS 93 433 433 HIS HIS A . n A 1 94 ASP 94 434 434 ASP ASP A . n A 1 95 VAL 95 435 435 VAL VAL A . n A 1 96 VAL 96 436 436 VAL VAL A . n A 1 97 ALA 97 437 437 ALA ALA A . n A 1 98 MET 98 438 438 MET MET A . n A 1 99 ALA 99 439 439 ALA ALA A . n A 1 100 ARG 100 440 440 ARG ARG A . n A 1 101 LYS 101 441 441 LYS LYS A . n A 1 102 LEU 102 442 442 LEU LEU A . n A 1 103 GLN 103 443 443 GLN GLN A . n A 1 104 ASP 104 444 444 ASP ASP A . n A 1 105 VAL 105 445 445 VAL VAL A . n A 1 106 PHE 106 446 446 PHE PHE A . n A 1 107 GLU 107 447 447 GLU GLU A . n A 1 108 PHE 108 448 448 PHE PHE A . n A 1 109 ARG 109 449 449 ARG ARG A . n A 1 110 TYR 110 450 450 TYR TYR A . n A 1 111 ALA 111 451 451 ALA ALA A . n A 1 112 LYS 112 452 452 LYS LYS A . n A 1 113 MET 113 453 453 MET MET A . n A 1 114 PRO 114 454 454 PRO PRO A . n A 1 115 ASP 115 455 455 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 501 1 EDO EDO A . C 2 EDO 1 502 2 EDO EDO A . D 2 EDO 1 503 3 EDO EDO A . E 3 UM5 1 504 1 UM5 LIG A . F 4 HOH 1 601 145 HOH HOH A . F 4 HOH 2 602 44 HOH HOH A . F 4 HOH 3 603 8 HOH HOH A . F 4 HOH 4 604 175 HOH HOH A . F 4 HOH 5 605 95 HOH HOH A . F 4 HOH 6 606 100 HOH HOH A . F 4 HOH 7 607 4 HOH HOH A . F 4 HOH 8 608 109 HOH HOH A . F 4 HOH 9 609 163 HOH HOH A . F 4 HOH 10 610 88 HOH HOH A . F 4 HOH 11 611 28 HOH HOH A . F 4 HOH 12 612 70 HOH HOH A . F 4 HOH 13 613 51 HOH HOH A . F 4 HOH 14 614 33 HOH HOH A . F 4 HOH 15 615 65 HOH HOH A . F 4 HOH 16 616 20 HOH HOH A . F 4 HOH 17 617 66 HOH HOH A . F 4 HOH 18 618 67 HOH HOH A . F 4 HOH 19 619 164 HOH HOH A . F 4 HOH 20 620 12 HOH HOH A . F 4 HOH 21 621 144 HOH HOH A . F 4 HOH 22 622 138 HOH HOH A . F 4 HOH 23 623 84 HOH HOH A . F 4 HOH 24 624 43 HOH HOH A . F 4 HOH 25 625 25 HOH HOH A . F 4 HOH 26 626 5 HOH HOH A . F 4 HOH 27 627 211 HOH HOH A . F 4 HOH 28 628 62 HOH HOH A . F 4 HOH 29 629 57 HOH HOH A . F 4 HOH 30 630 23 HOH HOH A . F 4 HOH 31 631 68 HOH HOH A . F 4 HOH 32 632 35 HOH HOH A . F 4 HOH 33 633 200 HOH HOH A . F 4 HOH 34 634 49 HOH HOH A . F 4 HOH 35 635 18 HOH HOH A . F 4 HOH 36 636 146 HOH HOH A . F 4 HOH 37 637 48 HOH HOH A . F 4 HOH 38 638 38 HOH HOH A . F 4 HOH 39 639 82 HOH HOH A . F 4 HOH 40 640 71 HOH HOH A . F 4 HOH 41 641 205 HOH HOH A . F 4 HOH 42 642 87 HOH HOH A . F 4 HOH 43 643 13 HOH HOH A . F 4 HOH 44 644 61 HOH HOH A . F 4 HOH 45 645 6 HOH HOH A . F 4 HOH 46 646 98 HOH HOH A . F 4 HOH 47 647 189 HOH HOH A . F 4 HOH 48 648 123 HOH HOH A . F 4 HOH 49 649 131 HOH HOH A . F 4 HOH 50 650 103 HOH HOH A . F 4 HOH 51 651 2 HOH HOH A . F 4 HOH 52 652 9 HOH HOH A . F 4 HOH 53 653 45 HOH HOH A . F 4 HOH 54 654 119 HOH HOH A . F 4 HOH 55 655 14 HOH HOH A . F 4 HOH 56 656 73 HOH HOH A . F 4 HOH 57 657 91 HOH HOH A . F 4 HOH 58 658 97 HOH HOH A . F 4 HOH 59 659 47 HOH HOH A . F 4 HOH 60 660 198 HOH HOH A . F 4 HOH 61 661 26 HOH HOH A . F 4 HOH 62 662 167 HOH HOH A . F 4 HOH 63 663 21 HOH HOH A . F 4 HOH 64 664 63 HOH HOH A . F 4 HOH 65 665 39 HOH HOH A . F 4 HOH 66 666 7 HOH HOH A . F 4 HOH 67 667 3 HOH HOH A . F 4 HOH 68 668 60 HOH HOH A . F 4 HOH 69 669 154 HOH HOH A . F 4 HOH 70 670 36 HOH HOH A . F 4 HOH 71 671 114 HOH HOH A . F 4 HOH 72 672 10 HOH HOH A . F 4 HOH 73 673 76 HOH HOH A . F 4 HOH 74 674 24 HOH HOH A . F 4 HOH 75 675 16 HOH HOH A . F 4 HOH 76 676 59 HOH HOH A . F 4 HOH 77 677 40 HOH HOH A . F 4 HOH 78 678 99 HOH HOH A . F 4 HOH 79 679 124 HOH HOH A . F 4 HOH 80 680 52 HOH HOH A . F 4 HOH 81 681 29 HOH HOH A . F 4 HOH 82 682 74 HOH HOH A . F 4 HOH 83 683 30 HOH HOH A . F 4 HOH 84 684 206 HOH HOH A . F 4 HOH 85 685 15 HOH HOH A . F 4 HOH 86 686 27 HOH HOH A . F 4 HOH 87 687 17 HOH HOH A . F 4 HOH 88 688 158 HOH HOH A . F 4 HOH 89 689 165 HOH HOH A . F 4 HOH 90 690 22 HOH HOH A . F 4 HOH 91 691 32 HOH HOH A . F 4 HOH 92 692 187 HOH HOH A . F 4 HOH 93 693 203 HOH HOH A . F 4 HOH 94 694 56 HOH HOH A . F 4 HOH 95 695 217 HOH HOH A . F 4 HOH 96 696 180 HOH HOH A . F 4 HOH 97 697 41 HOH HOH A . F 4 HOH 98 698 85 HOH HOH A . F 4 HOH 99 699 11 HOH HOH A . F 4 HOH 100 700 115 HOH HOH A . F 4 HOH 101 701 1 HOH HOH A . F 4 HOH 102 702 149 HOH HOH A . F 4 HOH 103 703 213 HOH HOH A . F 4 HOH 104 704 153 HOH HOH A . F 4 HOH 105 705 214 HOH HOH A . F 4 HOH 106 706 141 HOH HOH A . F 4 HOH 107 707 142 HOH HOH A . F 4 HOH 108 708 179 HOH HOH A . F 4 HOH 109 709 53 HOH HOH A . F 4 HOH 110 710 197 HOH HOH A . F 4 HOH 111 711 42 HOH HOH A . F 4 HOH 112 712 77 HOH HOH A . F 4 HOH 113 713 166 HOH HOH A . F 4 HOH 114 714 50 HOH HOH A . F 4 HOH 115 715 31 HOH HOH A . F 4 HOH 116 716 80 HOH HOH A . F 4 HOH 117 717 215 HOH HOH A . F 4 HOH 118 718 128 HOH HOH A . F 4 HOH 119 719 19 HOH HOH A . F 4 HOH 120 720 192 HOH HOH A . F 4 HOH 121 721 186 HOH HOH A . F 4 HOH 122 722 108 HOH HOH A . F 4 HOH 123 723 116 HOH HOH A . F 4 HOH 124 724 37 HOH HOH A . F 4 HOH 125 725 129 HOH HOH A . F 4 HOH 126 726 104 HOH HOH A . F 4 HOH 127 727 176 HOH HOH A . F 4 HOH 128 728 178 HOH HOH A . F 4 HOH 129 729 89 HOH HOH A . F 4 HOH 130 730 96 HOH HOH A . F 4 HOH 131 731 143 HOH HOH A . F 4 HOH 132 732 190 HOH HOH A . F 4 HOH 133 733 78 HOH HOH A . F 4 HOH 134 734 191 HOH HOH A . F 4 HOH 135 735 118 HOH HOH A . F 4 HOH 136 736 107 HOH HOH A . F 4 HOH 137 737 195 HOH HOH A . F 4 HOH 138 738 55 HOH HOH A . F 4 HOH 139 739 201 HOH HOH A . F 4 HOH 140 740 193 HOH HOH A . F 4 HOH 141 741 210 HOH HOH A . F 4 HOH 142 742 136 HOH HOH A . F 4 HOH 143 743 81 HOH HOH A . F 4 HOH 144 744 159 HOH HOH A . F 4 HOH 145 745 139 HOH HOH A . F 4 HOH 146 746 140 HOH HOH A . F 4 HOH 147 747 86 HOH HOH A . F 4 HOH 148 748 54 HOH HOH A . F 4 HOH 149 749 157 HOH HOH A . F 4 HOH 150 750 202 HOH HOH A . F 4 HOH 151 751 58 HOH HOH A . F 4 HOH 152 752 122 HOH HOH A . F 4 HOH 153 753 34 HOH HOH A . F 4 HOH 154 754 199 HOH HOH A . F 4 HOH 155 755 155 HOH HOH A . F 4 HOH 156 756 151 HOH HOH A . F 4 HOH 157 757 46 HOH HOH A . F 4 HOH 158 758 130 HOH HOH A . F 4 HOH 159 759 174 HOH HOH A . F 4 HOH 160 760 106 HOH HOH A . F 4 HOH 161 761 79 HOH HOH A . F 4 HOH 162 762 212 HOH HOH A . F 4 HOH 163 763 160 HOH HOH A . F 4 HOH 164 764 171 HOH HOH A . F 4 HOH 165 765 90 HOH HOH A . F 4 HOH 166 766 72 HOH HOH A . F 4 HOH 167 767 110 HOH HOH A . F 4 HOH 168 768 209 HOH HOH A . F 4 HOH 169 769 64 HOH HOH A . F 4 HOH 170 770 207 HOH HOH A . F 4 HOH 171 771 94 HOH HOH A . F 4 HOH 172 772 169 HOH HOH A . F 4 HOH 173 773 112 HOH HOH A . F 4 HOH 174 774 152 HOH HOH A . F 4 HOH 175 775 111 HOH HOH A . F 4 HOH 176 776 156 HOH HOH A . F 4 HOH 177 777 196 HOH HOH A . F 4 HOH 178 778 101 HOH HOH A . F 4 HOH 179 779 173 HOH HOH A . F 4 HOH 180 780 177 HOH HOH A . F 4 HOH 181 781 83 HOH HOH A . F 4 HOH 182 782 127 HOH HOH A . F 4 HOH 183 783 182 HOH HOH A . F 4 HOH 184 784 133 HOH HOH A . F 4 HOH 185 785 121 HOH HOH A . F 4 HOH 186 786 105 HOH HOH A . F 4 HOH 187 787 120 HOH HOH A . F 4 HOH 188 788 161 HOH HOH A . F 4 HOH 189 789 170 HOH HOH A . F 4 HOH 190 790 113 HOH HOH A . F 4 HOH 191 791 185 HOH HOH A . F 4 HOH 192 792 208 HOH HOH A . F 4 HOH 193 793 184 HOH HOH A . F 4 HOH 194 794 117 HOH HOH A . F 4 HOH 195 795 126 HOH HOH A . F 4 HOH 196 796 183 HOH HOH A . F 4 HOH 197 797 102 HOH HOH A . F 4 HOH 198 798 147 HOH HOH A . F 4 HOH 199 799 194 HOH HOH A . F 4 HOH 200 800 135 HOH HOH A . F 4 HOH 201 801 132 HOH HOH A . F 4 HOH 202 802 188 HOH HOH A . F 4 HOH 203 803 125 HOH HOH A . F 4 HOH 204 804 148 HOH HOH A . F 4 HOH 205 805 137 HOH HOH A . F 4 HOH 206 806 75 HOH HOH A . F 4 HOH 207 807 150 HOH HOH A . F 4 HOH 208 808 162 HOH HOH A . F 4 HOH 209 809 69 HOH HOH A . F 4 HOH 210 810 134 HOH HOH A . F 4 HOH 211 811 93 HOH HOH A . F 4 HOH 212 812 204 HOH HOH A . F 4 HOH 213 813 172 HOH HOH A . F 4 HOH 214 814 181 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 410 ? 1 MORE 6 ? 1 'SSA (A^2)' 6680 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 776 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-03-24 2 'Structure model' 1 1 2021-04-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? '2.11.7 (6-FEB-2020)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 # _pdbx_entry_details.entry_id 7NQ8 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id LEU _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 346 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 161.87 _pdbx_validate_torsion.psi -107.42 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 812 ? . 6.39 2 1 O ? A HOH 813 ? 7.56 . 3 1 O ? A HOH 814 ? 7.96 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 341 ? A GLY 1 2 1 Y 1 A SER 342 ? A SER 2 3 1 Y 1 A MET 343 ? A MET 3 4 1 Y 1 A GLY 344 ? A GLY 4 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id UM5 _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id UM5 _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 'N-ethyl-3-(1-methyl-1H-1,2,3-triazol-4-yl)-4-(pyridin-2-ylmethoxy)benzamide' UM5 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #