HEADER ISOMERASE 17-MAR-21 7NWR TITLE STRUCTURE OF BT1526, A MYO-INOSITOL-1-PHOSPHATE SYNTHASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: INOSITOL-3-PHOSPHATE SYNTHASE; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: MYO-INOSITOL-1-PHOSPHATE SYNTHASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON; SOURCE 3 ORGANISM_TAXID: 818; SOURCE 4 GENE: BATF92_28780, DW011_10900, DWY18_07415, DXA83_12175, SOURCE 5 GAG59_16320, GAN91_05515, GAN99_14790, GAO00_21425, SOURCE 6 HMPREF2534_03028, SAMN02910322_01983; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INOSITOL-1-PHOSPHATE, NAD, INOSITOL LIPID, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.BASLE,G.TANG,J.MARLES-WRIGHT,D.CAMPOPIANO REVDAT 3 31-JAN-24 7NWR 1 REMARK REVDAT 2 20-JUL-22 7NWR 1 JRNL REVDAT 1 30-MAR-22 7NWR 0 JRNL AUTH S.L.HEAVER,H.H.LE,P.TANG,A.BASLE,C.MIRRETTA BARONE,D.L.VU, JRNL AUTH 2 J.L.WATERS,J.MARLES-WRIGHT,E.L.JOHNSON,D.J.CAMPOPIANO, JRNL AUTH 3 R.E.LEY JRNL TITL CHARACTERIZATION OF INOSITOL LIPID METABOLISM IN JRNL TITL 2 GUT-ASSOCIATED BACTEROIDETES. JRNL REF NAT MICROBIOL V. 7 986 2022 JRNL REFN ESSN 2058-5276 JRNL PMID 35725777 JRNL DOI 10.1038/S41564-022-01152-6 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 59567 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.018 REMARK 3 FREE R VALUE TEST SET COUNT : 2989 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4115 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE SET COUNT : 211 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6738 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 89 REMARK 3 SOLVENT ATOMS : 331 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.18500 REMARK 3 B22 (A**2) : 0.14500 REMARK 3 B33 (A**2) : 0.04100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.189 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.163 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.132 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.022 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7000 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9502 ; 1.407 ; 1.637 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 851 ; 6.390 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 340 ;37.994 ;23.353 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1219 ;14.903 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;19.070 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 917 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5271 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3306 ; 0.207 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 4764 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 388 ; 0.143 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3407 ; 2.541 ; 3.242 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4254 ; 3.394 ; 4.850 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3592 ; 3.667 ; 3.506 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 5247 ; 5.078 ; 5.128 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : B A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 B 4 B 429 NULL REMARK 3 2 A 4 A 429 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE NOT BEEN USED REMARK 4 REMARK 4 7NWR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1292114693. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9796 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS, XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59644 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 58.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 13.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3QVT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM SODIUM FORMATE 100 MM BIS TRIS REMARK 280 PROPANE PH 6.5 20 % (W/V) PEG 3350, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.28150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 62.15900 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.28150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 62.15900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 54960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -157.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NA NA B 502 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 739 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 GLN B 3 REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 GLN A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG B 410 O HOH B 601 1.83 REMARK 500 NH2 ARG B 410 NH2 ARG A 410 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 410 CG - CD - NE ANGL. DEV. = -13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 122 75.33 -153.39 REMARK 500 CYS B 220 -76.99 -160.71 REMARK 500 ASP B 241A 102.60 81.60 REMARK 500 GLU B 303 73.14 56.98 REMARK 500 ASP B 313 65.50 -152.73 REMARK 500 TYR B 323 86.02 -158.91 REMARK 500 LYS B 327 -126.18 55.96 REMARK 500 TRP B 341 125.99 -31.82 REMARK 500 ASN A 56 3.09 81.57 REMARK 500 ALA A 122 75.04 -152.96 REMARK 500 CYS A 220 -80.52 -162.71 REMARK 500 ASP A 241 102.71 85.81 REMARK 500 GLU A 303 73.51 55.46 REMARK 500 ASP A 313 68.49 -153.18 REMARK 500 TYR A 323 85.47 -158.57 REMARK 500 LYS A 327 -125.34 56.28 REMARK 500 TRP A 341 124.03 -27.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 502 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 270 OG1 REMARK 620 2 THR B 270 OG1 0.0 REMARK 620 N 1 DBREF1 7NWR B 1 429 UNP A0A139K9L9_BACT4 DBREF2 7NWR B A0A139K9L9 1 429 DBREF1 7NWR A 1 429 UNP A0A139K9L9_BACT4 DBREF2 7NWR A A0A139K9L9 1 429 SEQADV 7NWR MET B -19 UNP A0A139K9L INITIATING METHIONINE SEQADV 7NWR GLY B -18 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR SER B -17 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR SER B -16 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS B -15 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS B -14 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS B -13 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS B -12 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS B -11 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS B -10 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR SER B -9 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR SER B -8 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR GLY B -7 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR LEU B -6 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR VAL B -5 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR PRO B -4 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR ARG B -3 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR GLY B -2 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR SER B -1 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS B 0 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR MET A -19 UNP A0A139K9L INITIATING METHIONINE SEQADV 7NWR GLY A -18 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR SER A -17 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR SER A -16 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS A -15 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS A -14 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS A -13 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS A -12 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS A -11 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS A -10 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR SER A -9 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR SER A -8 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR GLY A -7 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR LEU A -6 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR VAL A -5 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR PRO A -4 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR ARG A -3 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR GLY A -2 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR SER A -1 UNP A0A139K9L EXPRESSION TAG SEQADV 7NWR HIS A 0 UNP A0A139K9L EXPRESSION TAG SEQRES 1 B 449 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 449 LEU VAL PRO ARG GLY SER HIS MET LYS GLN GLU ILE LYS SEQRES 3 B 449 PRO ALA THR GLY ARG LEU GLY VAL LEU VAL VAL GLY VAL SEQRES 4 B 449 GLY GLY ALA VAL ALA THR THR MET ILE VAL GLY THR LEU SEQRES 5 B 449 ALA SER ARG LYS GLY LEU ALA LYS PRO ILE GLY SER ILE SEQRES 6 B 449 THR GLN LEU ALA THR MET ARG MET GLU ASN ASN GLU GLU SEQRES 7 B 449 LYS LEU ILE LYS ASP VAL VAL PRO LEU THR ASP LEU ASN SEQRES 8 B 449 ASP ILE VAL PHE GLY GLY TRP ASP ILE PHE PRO ASP ASN SEQRES 9 B 449 ALA TYR GLU ALA ALA MET TYR ALA GLU VAL LEU LYS GLU SEQRES 10 B 449 LYS ASP LEU ASN GLY VAL LYS ASP GLU LEU GLU ALA ILE SEQRES 11 B 449 LYS PRO MET PRO ALA ALA PHE ASP HIS ASN TRP ALA LYS SEQRES 12 B 449 ARG LEU ASN GLY THR HIS ILE LYS LYS ALA ALA THR ARG SEQRES 13 B 449 TRP GLU MET VAL GLU GLN LEU ARG GLN ASP ILE ARG ASP SEQRES 14 B 449 PHE LYS ALA ALA ASN ASN CYS GLU ARG VAL VAL VAL LEU SEQRES 15 B 449 TRP ALA ALA SER THR GLU ILE TYR ILE PRO LEU SER ASP SEQRES 16 B 449 GLU HIS MET SER LEU ALA ALA LEU GLU LYS ALA MET LYS SEQRES 17 B 449 ASP ASN ASN THR GLU VAL ILE SER PRO SER MET CYS TYR SEQRES 18 B 449 ALA TYR ALA ALA ILE ALA GLU ASP ALA PRO PHE VAL MET SEQRES 19 B 449 GLY ALA PRO ASN LEU CYS VAL ASP THR PRO ALA MET TRP SEQRES 20 B 449 GLU PHE SER LYS GLN LYS ASN VAL PRO ILE SER GLY LYS SEQRES 21 B 449 ASP PHE LYS SER GLY GLN THR LEU MET LYS THR VAL LEU SEQRES 22 B 449 ALA PRO MET PHE LYS THR ARG MET LEU GLY VAL ASN GLY SEQRES 23 B 449 TRP PHE SER THR ASN ILE LEU GLY ASN ARG ASP GLY GLU SEQRES 24 B 449 VAL LEU ASP ASP PRO ASP ASN PHE LYS THR LYS GLU VAL SEQRES 25 B 449 SER LYS LEU SER VAL ILE ASP THR ILE PHE GLU PRO GLU SEQRES 26 B 449 LYS TYR PRO ASP LEU TYR GLY ASP VAL TYR HIS LYS VAL SEQRES 27 B 449 ARG ILE ASN TYR TYR PRO PRO ARG LYS ASP ASN LYS GLU SEQRES 28 B 449 ALA TRP ASP ASN ILE ASP ILE PHE GLY TRP MET GLY TYR SEQRES 29 B 449 PRO MET GLU ILE LYS VAL ASN PHE LEU CYS ARG ASP SER SEQRES 30 B 449 ILE LEU ALA ALA PRO ILE ALA LEU ASP LEU VAL LEU PHE SEQRES 31 B 449 SER ASP LEU ALA MET ARG ALA GLY MET CYS GLY ILE GLN SEQRES 32 B 449 THR TRP LEU SER PHE PHE CYS LYS SER PRO MET HIS ASP SEQRES 33 B 449 PHE GLU HIS GLN PRO GLU HIS ASP LEU PHE THR GLN TRP SEQRES 34 B 449 ARG MET VAL LYS GLN THR LEU ARG ASN MET ILE GLY GLU SEQRES 35 B 449 LYS GLU PRO ASP TYR LEU ALA SEQRES 1 A 449 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 449 LEU VAL PRO ARG GLY SER HIS MET LYS GLN GLU ILE LYS SEQRES 3 A 449 PRO ALA THR GLY ARG LEU GLY VAL LEU VAL VAL GLY VAL SEQRES 4 A 449 GLY GLY ALA VAL ALA THR THR MET ILE VAL GLY THR LEU SEQRES 5 A 449 ALA SER ARG LYS GLY LEU ALA LYS PRO ILE GLY SER ILE SEQRES 6 A 449 THR GLN LEU ALA THR MET ARG MET GLU ASN ASN GLU GLU SEQRES 7 A 449 LYS LEU ILE LYS ASP VAL VAL PRO LEU THR ASP LEU ASN SEQRES 8 A 449 ASP ILE VAL PHE GLY GLY TRP ASP ILE PHE PRO ASP ASN SEQRES 9 A 449 ALA TYR GLU ALA ALA MET TYR ALA GLU VAL LEU LYS GLU SEQRES 10 A 449 LYS ASP LEU ASN GLY VAL LYS ASP GLU LEU GLU ALA ILE SEQRES 11 A 449 LYS PRO MET PRO ALA ALA PHE ASP HIS ASN TRP ALA LYS SEQRES 12 A 449 ARG LEU ASN GLY THR HIS ILE LYS LYS ALA ALA THR ARG SEQRES 13 A 449 TRP GLU MET VAL GLU GLN LEU ARG GLN ASP ILE ARG ASP SEQRES 14 A 449 PHE LYS ALA ALA ASN ASN CYS GLU ARG VAL VAL VAL LEU SEQRES 15 A 449 TRP ALA ALA SER THR GLU ILE TYR ILE PRO LEU SER ASP SEQRES 16 A 449 GLU HIS MET SER LEU ALA ALA LEU GLU LYS ALA MET LYS SEQRES 17 A 449 ASP ASN ASN THR GLU VAL ILE SER PRO SER MET CYS TYR SEQRES 18 A 449 ALA TYR ALA ALA ILE ALA GLU ASP ALA PRO PHE VAL MET SEQRES 19 A 449 GLY ALA PRO ASN LEU CYS VAL ASP THR PRO ALA MET TRP SEQRES 20 A 449 GLU PHE SER LYS GLN LYS ASN VAL PRO ILE SER GLY LYS SEQRES 21 A 449 ASP PHE LYS SER GLY GLN THR LEU MET LYS THR VAL LEU SEQRES 22 A 449 ALA PRO MET PHE LYS THR ARG MET LEU GLY VAL ASN GLY SEQRES 23 A 449 TRP PHE SER THR ASN ILE LEU GLY ASN ARG ASP GLY GLU SEQRES 24 A 449 VAL LEU ASP ASP PRO ASP ASN PHE LYS THR LYS GLU VAL SEQRES 25 A 449 SER LYS LEU SER VAL ILE ASP THR ILE PHE GLU PRO GLU SEQRES 26 A 449 LYS TYR PRO ASP LEU TYR GLY ASP VAL TYR HIS LYS VAL SEQRES 27 A 449 ARG ILE ASN TYR TYR PRO PRO ARG LYS ASP ASN LYS GLU SEQRES 28 A 449 ALA TRP ASP ASN ILE ASP ILE PHE GLY TRP MET GLY TYR SEQRES 29 A 449 PRO MET GLU ILE LYS VAL ASN PHE LEU CYS ARG ASP SER SEQRES 30 A 449 ILE LEU ALA ALA PRO ILE ALA LEU ASP LEU VAL LEU PHE SEQRES 31 A 449 SER ASP LEU ALA MET ARG ALA GLY MET CYS GLY ILE GLN SEQRES 32 A 449 THR TRP LEU SER PHE PHE CYS LYS SER PRO MET HIS ASP SEQRES 33 A 449 PHE GLU HIS GLN PRO GLU HIS ASP LEU PHE THR GLN TRP SEQRES 34 A 449 ARG MET VAL LYS GLN THR LEU ARG ASN MET ILE GLY GLU SEQRES 35 A 449 LYS GLU PRO ASP TYR LEU ALA HET NAD B 501 44 HET NA B 502 1 HET NAD A 501 44 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM NA SODIUM ION FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 NA NA 1+ FORMUL 6 HOH *331(H2 O) HELIX 1 AA1 GLY B 21 LYS B 36 1 16 HELIX 2 AA2 SER B 44 ALA B 49 1 6 HELIX 3 AA3 LYS B 62 VAL B 64 5 3 HELIX 4 AA4 ASP B 69 ASN B 71 5 3 HELIX 5 AA5 ASN B 84 GLU B 93 1 10 HELIX 6 AA6 LYS B 96 GLY B 102 1 7 HELIX 7 AA7 VAL B 103 ALA B 109 1 7 HELIX 8 AA8 ASP B 118 ALA B 122 5 5 HELIX 9 AA9 THR B 135 ASN B 155 1 21 HELIX 10 AB1 SER B 174 MET B 178 5 5 HELIX 11 AB2 SER B 179 ASP B 189 1 11 HELIX 12 AB3 SER B 196 GLU B 208 1 13 HELIX 13 AB4 THR B 223 ASN B 234 1 12 HELIX 14 AB5 GLY B 245 ARG B 260 1 16 HELIX 15 AB6 ASN B 275 ASP B 282 1 8 HELIX 16 AB7 ASP B 283 SER B 296 1 14 HELIX 17 AB8 ILE B 298 GLU B 303 1 6 HELIX 18 AB9 TYR B 307 GLY B 312 1 6 HELIX 19 AC1 PRO B 324 LYS B 327 5 4 HELIX 20 AC2 TRP B 341 GLY B 343 5 3 HELIX 21 AC3 ARG B 355 ALA B 377 1 23 HELIX 22 AC4 THR B 384 CYS B 390 5 7 HELIX 23 AC5 ASP B 404 ILE B 420 1 17 HELIX 24 AC6 GLY A 21 LYS A 36 1 16 HELIX 25 AC7 SER A 44 ALA A 49 1 6 HELIX 26 AC8 LYS A 62 VAL A 64 5 3 HELIX 27 AC9 ASP A 69 ASN A 71 5 3 HELIX 28 AD1 ASN A 84 GLU A 93 1 10 HELIX 29 AD2 LYS A 96 GLY A 102 1 7 HELIX 30 AD3 VAL A 103 ALA A 109 1 7 HELIX 31 AD4 ASP A 118 ALA A 122 5 5 HELIX 32 AD5 THR A 135 ASN A 155 1 21 HELIX 33 AD6 SER A 174 MET A 178 5 5 HELIX 34 AD7 SER A 179 ASP A 189 1 11 HELIX 35 AD8 SER A 196 GLU A 208 1 13 HELIX 36 AD9 THR A 223 ASN A 234 1 12 HELIX 37 AE1 GLY A 245 ARG A 260 1 16 HELIX 38 AE2 ASN A 275 ASP A 282 1 8 HELIX 39 AE3 ASP A 283 SER A 296 1 14 HELIX 40 AE4 ILE A 298 GLU A 303 1 6 HELIX 41 AE5 TYR A 307 GLY A 312 1 6 HELIX 42 AE6 PRO A 324 LYS A 327 5 4 HELIX 43 AE7 TRP A 341 GLY A 343 5 3 HELIX 44 AE8 ARG A 355 ALA A 377 1 23 HELIX 45 AE9 THR A 384 CYS A 390 5 7 HELIX 46 AF1 ASP A 404 ILE A 420 1 17 SHEET 1 AA1 7 MET B 113 PRO B 114 0 SHEET 2 AA1 7 ILE B 73 ASP B 79 1 N GLY B 77 O MET B 113 SHEET 3 AA1 7 ARG B 11 VAL B 17 1 N VAL B 16 O GLY B 76 SHEET 4 AA1 7 CYS B 156 TRP B 163 1 O LEU B 162 N VAL B 17 SHEET 5 AA1 7 PHE B 212 MET B 214 1 O VAL B 213 N TRP B 163 SHEET 6 AA1 7 PRO B 236 GLY B 239 1 O SER B 238 N MET B 214 SHEET 7 AA1 7 GLY B 381 ILE B 382 1 O GLY B 381 N ILE B 237 SHEET 1 AA2 2 THR B 50 ARG B 52 0 SHEET 2 AA2 2 GLU B 58 LEU B 60 -1 O LYS B 59 N MET B 51 SHEET 1 AA3 8 TYR B 315 VAL B 318 0 SHEET 2 AA3 8 GLY B 263 LEU B 273 1 N SER B 269 O LYS B 317 SHEET 3 AA3 8 GLU B 331 PHE B 339 -1 O ASN B 335 N PHE B 268 SHEET 4 AA3 8 PRO B 345 LEU B 353 -1 O PHE B 352 N ALA B 332 SHEET 5 AA3 8 PRO A 345 LEU A 353 -1 O ASN A 351 N LYS B 349 SHEET 6 AA3 8 GLU A 331 PHE A 339 -1 N ALA A 332 O PHE A 352 SHEET 7 AA3 8 GLY A 263 LEU A 273 -1 N ILE A 272 O GLU A 331 SHEET 8 AA3 8 TYR A 315 VAL A 318 1 O LYS A 317 N SER A 269 SHEET 1 AA4 8 ASN B 321 TYR B 322 0 SHEET 2 AA4 8 GLY B 263 LEU B 273 1 N LEU B 273 O ASN B 321 SHEET 3 AA4 8 GLU B 331 PHE B 339 -1 O ASN B 335 N PHE B 268 SHEET 4 AA4 8 PRO B 345 LEU B 353 -1 O PHE B 352 N ALA B 332 SHEET 5 AA4 8 PRO A 345 LEU A 353 -1 O ASN A 351 N LYS B 349 SHEET 6 AA4 8 GLU A 331 PHE A 339 -1 N ALA A 332 O PHE A 352 SHEET 7 AA4 8 GLY A 263 LEU A 273 -1 N ILE A 272 O GLU A 331 SHEET 8 AA4 8 ASN A 321 TYR A 322 1 O ASN A 321 N LEU A 273 SHEET 1 AA5 7 MET A 113 PRO A 114 0 SHEET 2 AA5 7 ILE A 73 ASP A 79 1 N GLY A 77 O MET A 113 SHEET 3 AA5 7 ARG A 11 VAL A 17 1 N VAL A 16 O GLY A 76 SHEET 4 AA5 7 CYS A 156 TRP A 163 1 O LEU A 162 N VAL A 17 SHEET 5 AA5 7 PHE A 212 MET A 214 1 O VAL A 213 N TRP A 163 SHEET 6 AA5 7 PRO A 236 GLY A 239 1 O SER A 238 N MET A 214 SHEET 7 AA5 7 GLY A 381 ILE A 382 1 O GLY A 381 N ILE A 237 SHEET 1 AA6 2 THR A 50 ARG A 52 0 SHEET 2 AA6 2 GLU A 58 LEU A 60 -1 O LYS A 59 N MET A 51 LINK OG1 THR B 270 NA NA B 502 1555 1555 3.06 LINK OG1 THR B 270 NA NA B 502 1555 2555 3.06 CISPEP 1 GLY B 239 LYS B 241 0 2.18 CISPEP 2 GLY A 239 LYS A 240 0 2.35 CRYST1 66.805 104.563 124.318 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014969 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009564 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008044 0.00000