HEADER OXIDOREDUCTASE 30-MAR-21 7O1R TITLE UNSPECIFIC PEROXYGENASE FROM HYPOXYLON SP. EC38 IN COMPLEX WITH TITLE 2 IMIDAZOLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXYGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CLOROPEROXIDASE,PEROXYGENASE; COMPND 5 EC: 1.11.2.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HYPOXYLON SP. EC38; SOURCE 3 ORGANISM_TAXID: 1001937; SOURCE 4 GENE: K449DRAFT_467810; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS PEROXYGENASE, HEME, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR L.ROTILIO,A.MATTEVI REVDAT 3 31-JAN-24 7O1R 1 REMARK REVDAT 2 29-SEP-21 7O1R 1 JRNL REVDAT 1 15-SEP-21 7O1R 0 JRNL AUTH L.ROTILIO,A.SWOBODA,K.EBNER,C.RINNOFNER,A.GLIEDER,W.KROUTIL, JRNL AUTH 2 A.MATTEVI JRNL TITL STRUCTURAL AND BIOCHEMICAL STUDIES ENLIGHTEN THE UNSPECIFIC JRNL TITL 2 PEROXYGENASE FROM HYPOXYLON SP. EC38 AS AN EFFICIENT JRNL TITL 3 OXIDATIVE BIOCATALYST. JRNL REF ACS CATALYSIS V. 11 11511 2021 JRNL REFN ESSN 2155-5435 JRNL PMID 34540338 JRNL DOI 10.1021/ACSCATAL.1C03065 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 96147 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.140 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.158 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7028 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE SET COUNT : 208 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1757 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 99 REMARK 3 SOLVENT ATOMS : 222 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.20000 REMARK 3 B22 (A**2) : -0.20000 REMARK 3 B33 (A**2) : 0.40000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.031 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.031 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.026 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.529 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.980 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.979 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1980 ; 0.021 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1742 ; 0.004 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2706 ; 2.286 ; 1.704 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4061 ; 1.711 ; 1.620 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 242 ; 5.928 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 99 ;30.364 ;23.939 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 290 ;11.066 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;16.162 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 258 ; 0.125 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2270 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 418 ; 0.009 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3720 ; 7.827 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 7O1R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-MAR-21. REMARK 100 THE DEPOSITION ID IS D_1292114990. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 99264 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 48.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 25.80 REMARK 200 R MERGE (I) : 0.15800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 24.90 REMARK 200 R MERGE FOR SHELL (I) : 4.77100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5FUK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG500 MME, 10% PEG20000, 0.1 M REMARK 280 MES MONOHYDRATE PH 6.5, 0.1 M IMIDAZOLE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.85200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.86300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.86300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.42600 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.86300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.86300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 115.27800 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.86300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.86300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 38.42600 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.86300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.86300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 115.27800 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 76.85200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 499 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 SER A 3 REMARK 465 LEU A 4 REMARK 465 SER A 5 REMARK 465 PHE A 6 REMARK 465 SER A 7 REMARK 465 LEU A 8 REMARK 465 ALA A 9 REMARK 465 LEU A 10 REMARK 465 GLY A 11 REMARK 465 PHE A 12 REMARK 465 GLY A 13 REMARK 465 SER A 14 REMARK 465 THR A 15 REMARK 465 LEU A 16 REMARK 465 VAL A 17 REMARK 465 TYR A 18 REMARK 465 SER A 19 REMARK 465 ALA A 20 REMARK 465 PRO A 21 REMARK 465 SER A 22 REMARK 465 PRO A 23 REMARK 465 SER A 24 REMARK 465 GLY A 252 REMARK 465 ASP A 253 REMARK 465 THR A 254 REMARK 465 ARG A 255 REMARK 465 CYS A 256 REMARK 465 PRO A 257 REMARK 465 TYR A 258 REMARK 465 GLY A 259 REMARK 465 TYR A 260 REMARK 465 HIS A 261 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C5 IMD A 308 O HOH A 471 1.69 REMARK 500 O HOH A 403 O HOH A 452 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 213 CD GLU A 213 OE1 0.108 REMARK 500 GLU A 249 CD GLU A 249 OE2 0.067 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 153 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 VAL A 155 CG1 - CB - CG2 ANGL. DEV. = -10.7 DEGREES REMARK 500 ARG A 209 NE - CZ - NH1 ANGL. DEV. = 7.7 DEGREES REMARK 500 ARG A 209 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ARG A 251 CA - C - O ANGL. DEV. = -22.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 107 -80.26 -93.55 REMARK 500 GLU A 249 10.74 -144.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PEG A 309 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 303 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 39 SG REMARK 620 2 HEM A 303 NA 96.9 REMARK 620 3 HEM A 303 NB 96.8 91.8 REMARK 620 4 HEM A 303 NC 89.9 173.1 88.3 REMARK 620 5 HEM A 303 ND 94.9 88.2 168.2 90.3 REMARK 620 6 IMD A 304 N1 171.9 91.1 81.7 82.0 86.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 109 OE2 REMARK 620 2 HIS A 110 O 85.2 REMARK 620 3 SER A 113 OG 174.9 92.2 REMARK 620 4 HEM A 303 O2A 100.9 87.7 83.4 REMARK 620 5 HOH A 472 O 91.5 174.1 91.5 88.1 REMARK 620 6 HOH A 557 O 86.7 91.1 89.0 172.2 93.6 REMARK 620 N 1 2 3 4 5 DBREF1 7O1R A 1 261 UNP A0A1Y2TH07_9PEZI DBREF2 7O1R A A0A1Y2TH07 1 261 SEQRES 1 A 261 MET LYS SER LEU SER PHE SER LEU ALA LEU GLY PHE GLY SEQRES 2 A 261 SER THR LEU VAL TYR SER ALA PRO SER PRO SER SER GLY SEQRES 3 A 261 TRP GLN ALA PRO GLY PRO ASN ASP VAL ARG ALA PRO CYS SEQRES 4 A 261 PRO MET LEU ASN THR LEU ALA ASN HIS GLY PHE LEU PRO SEQRES 5 A 261 HIS ASP GLY LYS GLY ILE THR VAL ASN LYS THR ILE ASP SEQRES 6 A 261 ALA LEU GLY SER ALA LEU ASN ILE ASP ALA ASN LEU SER SEQRES 7 A 261 THR LEU LEU PHE GLY PHE ALA ALA THR THR ASN PRO GLN SEQRES 8 A 261 PRO ASN ALA THR PHE PHE ASP LEU ASP HIS LEU SER ARG SEQRES 9 A 261 HIS ASN ILE LEU GLU HIS ASP ALA SER LEU SER ARG GLN SEQRES 10 A 261 ASP SER TYR PHE GLY PRO ALA ASP VAL PHE ASN GLU ALA SEQRES 11 A 261 VAL PHE ASN GLN THR LYS SER PHE TRP THR GLY ASP ILE SEQRES 12 A 261 ILE ASP VAL GLN MET ALA ALA ASN ALA ARG ILE VAL ARG SEQRES 13 A 261 LEU LEU THR SER ASN LEU THR ASN PRO GLU TYR SER LEU SEQRES 14 A 261 SER ASP LEU GLY SER ALA PHE SER ILE GLY GLU SER ALA SEQRES 15 A 261 ALA TYR ILE GLY ILE LEU GLY ASP LYS LYS SER ALA THR SEQRES 16 A 261 VAL PRO LYS SER TRP VAL GLU TYR LEU PHE GLU ASN GLU SEQRES 17 A 261 ARG LEU PRO TYR GLU LEU GLY PHE LYS ARG PRO ASN ASP SEQRES 18 A 261 PRO PHE THR THR ASP ASP LEU GLY ASP LEU SER THR GLN SEQRES 19 A 261 ILE ILE ASN ALA GLN HIS PHE PRO GLN SER PRO GLY LYS SEQRES 20 A 261 VAL GLU LYS ARG GLY ASP THR ARG CYS PRO TYR GLY TYR SEQRES 21 A 261 HIS HET MG A 301 1 HET NAG A 302 14 HET HEM A 303 43 HET IMD A 304 5 HET NAG A 305 14 HET BU1 A 306 6 HET PEG A 307 7 HET IMD A 308 5 HET PEG A 309 4 HETNAM MG MAGNESIUM ION HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM IMD IMIDAZOLE HETNAM BU1 1,4-BUTANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN HEM HEME FORMUL 2 MG MG 2+ FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 4 HEM C34 H32 FE N4 O4 FORMUL 5 IMD 2(C3 H5 N2 1+) FORMUL 7 BU1 C4 H10 O2 FORMUL 8 PEG 2(C4 H10 O3) FORMUL 11 HOH *222(H2 O) HELIX 1 AA1 CYS A 39 HIS A 48 1 10 HELIX 2 AA2 THR A 59 ASN A 72 1 14 HELIX 3 AA3 ASP A 74 THR A 87 1 14 HELIX 4 AA4 ASP A 98 ARG A 104 5 7 HELIX 5 AA5 ASN A 128 PHE A 138 1 11 HELIX 6 AA6 VAL A 146 ASN A 164 1 19 HELIX 7 AA7 SER A 170 GLY A 189 1 20 HELIX 8 AA8 LYS A 198 GLU A 208 1 11 HELIX 9 AA9 PRO A 211 GLY A 215 5 5 HELIX 10 AB1 THR A 224 ALA A 238 1 15 SHEET 1 AA1 2 ILE A 143 ASP A 145 0 SHEET 2 AA1 2 THR A 195 PRO A 197 -1 O VAL A 196 N ILE A 144 LINK ND2 ASN A 133 C1 NAG A 305 1555 1555 1.45 LINK ND2 ASN A 161 C1 NAG A 302 1555 1555 1.45 LINK SG CYS A 39 FE HEM A 303 1555 1555 2.39 LINK OE2 GLU A 109 MG MG A 301 1555 1555 2.12 LINK O HIS A 110 MG MG A 301 1555 1555 2.10 LINK OG SER A 113 MG MG A 301 1555 1555 2.14 LINK MG MG A 301 O2A HEM A 303 1555 1555 2.16 LINK MG MG A 301 O HOH A 472 1555 1555 2.09 LINK MG MG A 301 O HOH A 557 1555 1555 2.13 LINK FE HEM A 303 N1 IMD A 304 1555 1555 2.27 CRYST1 71.726 71.726 153.704 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013942 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013942 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006506 0.00000