HEADER DNA BINDING PROTEIN 13-APR-21 7O7B TITLE SOLUTION NMR STRUCTURE OF THE NEH1 DOMAIN OF HUMAN NUCLEAR FACTOR TITLE 2 ERYTHROID 2-RELATED FACTOR 2 (NRF2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 3 OF NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NF-E2-RELATED FACTOR 2,NFE2-RELATED FACTOR 2,NRF-2,HEBP1, COMPND 5 NUCLEAR FACTOR,ERYTHROID DERIVED 2,LIKE 2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NFE2L2, NRF2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CAP N COLLAR (CNC), BASIC LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR, KEYWDS 2 ANTIOXIDANT RESPONSE, DNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR S.BRUESCHWEILER REVDAT 4 19-JUN-24 7O7B 1 REMARK REVDAT 3 14-JUN-23 7O7B 1 REMARK REVDAT 2 15-DEC-21 7O7B 1 JRNL REVDAT 1 29-SEP-21 7O7B 0 JRNL AUTH S.BRUSCHWEILER,J.E.FUCHS,G.BADER,D.B.MCCONNELL,R.KONRAT, JRNL AUTH 2 M.MAYER JRNL TITL A STEP TOWARD NRF2-DNA INTERACTION INHIBITORS BY JRNL TITL 2 FRAGMENT-BASED NMR METHODS. JRNL REF CHEMMEDCHEM V. 16 3576 2021 JRNL REFN ESSN 1860-7187 JRNL PMID 34524728 JRNL DOI 10.1002/CMDC.202100458 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7O7B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-APR-21. REMARK 100 THE DEPOSITION ID IS D_1292114385. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-100% 13C; U-100% 15N] REMARK 210 NEH1, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCA; 3D HN(CO)CA; 3D HNCO; REMARK 210 3D HN(CA)CO; 3D CBCA(CO)NH; 3D REMARK 210 HNCACB; 3D (H)CCONNH; 3D HCCH- REMARK 210 TOCSY; 3D 1H-13C NOESY ALIPHATIC; REMARK 210 3D 1H-15N NOESY; 2D 1H-13C HSQC; REMARK 210 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III HD; AVANCE NOE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCNMR REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 458 HZ3 LYS A 462 1.59 REMARK 500 OD1 ASP A 457 HH21 ARG A 460 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 451 -92.12 65.87 REMARK 500 1 LEU A 454 -82.49 -135.28 REMARK 500 1 ASN A 507 82.73 -68.00 REMARK 500 1 ALA A 511 30.77 -80.08 REMARK 500 1 CYS A 514 89.08 55.11 REMARK 500 1 ARG A 517 43.17 -103.78 REMARK 500 1 LYS A 518 79.74 -102.66 REMARK 500 1 ASN A 521 65.94 -159.61 REMARK 500 2 SER A 448 62.37 -158.13 REMARK 500 2 ARG A 449 -57.49 -126.24 REMARK 500 2 LEU A 454 -91.18 67.39 REMARK 500 2 ASN A 507 66.30 -119.77 REMARK 500 2 ALA A 511 46.42 -108.89 REMARK 500 2 GLU A 520 -61.74 -98.41 REMARK 500 3 SER A 447 66.03 -105.06 REMARK 500 3 ARG A 449 -48.17 71.47 REMARK 500 3 PRO A 467 33.48 -89.11 REMARK 500 3 GLU A 488 104.26 -48.86 REMARK 500 3 CYS A 514 137.10 -170.66 REMARK 500 3 LYS A 516 156.09 68.98 REMARK 500 3 LEU A 519 -90.63 -133.76 REMARK 500 3 GLU A 520 31.67 -145.13 REMARK 500 3 ASN A 521 38.67 70.47 REMARK 500 4 ALA A 444 -47.66 71.80 REMARK 500 4 GLU A 451 150.83 72.43 REMARK 500 4 LEU A 454 -81.48 -155.31 REMARK 500 4 GLN A 489 82.13 -150.03 REMARK 500 4 LYS A 506 -37.48 177.26 REMARK 500 4 ASN A 507 -80.30 72.24 REMARK 500 4 GLN A 512 60.77 66.32 REMARK 500 5 LEU A 454 -65.88 -153.46 REMARK 500 5 LYS A 487 33.54 -92.86 REMARK 500 5 GLU A 488 94.41 -58.64 REMARK 500 5 ASN A 507 -151.34 61.34 REMARK 500 5 ARG A 517 -72.44 68.45 REMARK 500 5 LYS A 518 -90.13 -104.34 REMARK 500 6 HIS A 446 24.94 -158.25 REMARK 500 6 SER A 447 50.87 -149.21 REMARK 500 6 ALA A 452 -99.19 55.54 REMARK 500 6 ALA A 511 55.06 -172.70 REMARK 500 6 ASN A 513 -53.04 -168.49 REMARK 500 6 ARG A 517 64.06 -160.14 REMARK 500 6 ILE A 522 88.03 61.25 REMARK 500 7 SER A 447 44.36 -86.24 REMARK 500 7 LEU A 450 -71.13 -175.26 REMARK 500 7 GLU A 451 -37.81 -169.70 REMARK 500 7 ALA A 452 -101.43 -81.81 REMARK 500 7 LEU A 454 -65.16 -96.57 REMARK 500 7 LYS A 506 -64.68 67.55 REMARK 500 7 ASN A 507 55.64 -165.81 REMARK 500 REMARK 500 THIS ENTRY HAS 184 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34617 RELATED DB: BMRB REMARK 900 SOLUTION NMR STRUCTURE OF THE NEH1 DOMAIN OF HUMAN NUCLEAR FACTOR REMARK 900 ERYTHROID 2-RELATED FACTOR 2 (NRF2) DBREF 7O7B A 445 523 UNP Q16236 NF2L2_HUMAN 422 500 SEQADV 7O7B GLY A 443 UNP Q16236 EXPRESSION TAG SEQADV 7O7B ALA A 444 UNP Q16236 EXPRESSION TAG SEQRES 1 A 81 GLY ALA LYS HIS SER SER ARG LEU GLU ALA HIS LEU THR SEQRES 2 A 81 ARG ASP GLU LEU ARG ALA LYS ALA LEU HIS ILE PRO PHE SEQRES 3 A 81 PRO VAL GLU LYS ILE ILE ASN LEU PRO VAL VAL ASP PHE SEQRES 4 A 81 ASN GLU MET MET SER LYS GLU GLN PHE ASN GLU ALA GLN SEQRES 5 A 81 LEU ALA LEU ILE ARG ASP ILE ARG ARG ARG GLY LYS ASN SEQRES 6 A 81 LYS VAL ALA ALA GLN ASN CYS ARG LYS ARG LYS LEU GLU SEQRES 7 A 81 ASN ILE VAL HELIX 1 AA1 THR A 455 LEU A 464 1 10 HELIX 2 AA2 PRO A 469 LEU A 476 1 8 HELIX 3 AA3 PRO A 477 GLU A 488 1 12 HELIX 4 AA4 ASN A 491 LYS A 506 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1