HEADER OXYGEN TRANSPORT 10-MAY-21 7OHD TITLE CRYSTAL STRUCTURE OF FERRIC MURINE NEUROGLOBIN CDLESS MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEUROGLOBIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE COMPND 6 N- (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 7 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 8 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 9 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 10 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 11 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 12 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 13 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 14 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 15 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 16 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 17 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 18 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 19 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 20 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 21 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 22 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 23 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 24 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 25 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 26 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 27 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 28 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 29 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 30 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 31 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 32 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 33 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 34 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 35 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 36 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 37 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 38 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 39 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 40 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 41 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 42 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 43 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 44 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 45 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 46 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 47 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 48 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 49 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 50 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 51 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 52 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 53 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 54 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 55 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 56 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 57 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 58 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 59 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 60 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 61 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 62 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 63 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 64 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 65 RESIDUES),CHAIN A: NO CLEARLY DEFINED ELECTRONIC DENSITY FOR THE N- COMPND 66 (FIRST THREE RESIDUES) AND C-TERMINAL (LAST TWO RESIDUES) PARTS, COMPND 67 CHAIN B: NO CLEARLY DEFINED ELECTRONIC DENSITY BETWEEN G43 AND P46 NO COMPND 68 CLEARLY DEFINED ELECTRONIC DENSITY FOR THE C-TERMINAL PART (LAST TWO COMPND 69 RESIDUES) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: NGB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS KEYWDS HEME PROTEIN, OXYGEN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR C.EXERTIER,I.FREDA,L.C.MONTEMIGLIO,C.SAVINO,G.CERUTTI,E.GUGOLE, AUTHOR 2 B.VALLONE REVDAT 3 31-JAN-24 7OHD 1 REMARK REVDAT 2 28-SEP-22 7OHD 1 JRNL REVDAT 1 13-JUL-22 7OHD 0 JRNL AUTH C.EXERTIER,F.SEBASTIANI,I.FREDA,E.GUGOLE,G.CERUTTI,G.PARISI, JRNL AUTH 2 L.C.MONTEMIGLIO,M.BECUCCI,C.VIAPPIANI,S.BRUNO,C.SAVINO, JRNL AUTH 3 C.ZAMPARELLI,M.ANSELMI,S.ABBRUZZETTI,G.SMULEVICH,B.VALLONE JRNL TITL PROBING THE ROLE OF MURINE NEUROGLOBIN CDLOOP-D-HELIX UNIT JRNL TITL 2 IN CO LIGAND BINDING AND STRUCTURAL DYNAMICS. JRNL REF ACS CHEM.BIOL. V. 17 2099 2022 JRNL REFN ESSN 1554-8937 JRNL PMID 35797699 JRNL DOI 10.1021/ACSCHEMBIO.2C00172 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.02 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 27161 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1464 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2004 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.3770 REMARK 3 BIN FREE R VALUE SET COUNT : 100 REMARK 3 BIN FREE R VALUE : 0.3670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2110 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 140 REMARK 3 SOLVENT ATOMS : 89 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35000 REMARK 3 B22 (A**2) : -0.35000 REMARK 3 B33 (A**2) : 1.15000 REMARK 3 B12 (A**2) : -0.18000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.132 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.120 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.106 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.592 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2625 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2468 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3638 ; 1.557 ; 1.770 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5693 ; 1.358 ; 1.638 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 317 ; 4.744 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 137 ;30.652 ;19.343 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 427 ;16.397 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;18.541 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 305 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2917 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 639 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 4 134 B 4 134 4099 0.120 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7OHD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1292111339. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979499 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47796 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 48.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.3 REMARK 200 DATA REDUNDANCY : 12.05 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6H6I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.8 M AMMONIUM SULFATE, 0.1 M BIS-TRIS REMARK 280 PH 6.0, 3% ISOPROPANOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 29.28000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 29.28000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.28000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 345 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 346 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ARG A 3 REMARK 465 GLY A 137 REMARK 465 GLU A 138 REMARK 465 HIS B 0 REMARK 465 SER B 44 REMARK 465 SER B 45 REMARK 465 GLY B 137 REMARK 465 GLU B 138 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 19 77.24 -159.39 REMARK 500 SER A 19 78.10 -159.81 REMARK 500 SER A 44 -167.60 -119.15 REMARK 500 ASP A 68 82.66 -160.29 REMARK 500 SER B 19 75.44 -160.51 REMARK 500 GLU B 47 110.60 -167.18 REMARK 500 ASP B 68 82.92 -160.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 GOL A 203 REMARK 610 GOL B 203 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 51 NE2 REMARK 620 2 HEM A 201 NA 80.0 REMARK 620 3 HEM A 201 NB 91.0 88.6 REMARK 620 4 HEM A 201 NC 99.8 179.0 90.5 REMARK 620 5 HEM A 201 ND 89.8 91.5 179.2 89.4 REMARK 620 6 HIS A 83 NE2 163.3 83.3 89.3 96.9 89.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 51 NE2 REMARK 620 2 HEM A 201 NA 106.2 REMARK 620 3 HEM A 201 NB 79.8 87.5 REMARK 620 4 HEM A 201 NC 71.0 172.4 85.1 REMARK 620 5 HEM A 201 ND 97.9 93.1 177.6 94.3 REMARK 620 6 HIS A 83 NE2 146.2 87.7 70.1 91.2 112.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 51 NE2 REMARK 620 2 HEM B 201 NA 87.6 REMARK 620 3 HEM B 201 NB 85.3 88.3 REMARK 620 4 HEM B 201 NC 90.9 177.0 89.0 REMARK 620 5 HEM B 201 ND 93.4 90.8 178.5 91.9 REMARK 620 6 HIS B 83 NE2 174.2 91.1 89.1 90.2 92.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 51 NE2 REMARK 620 2 HEM B 201 NA 90.5 REMARK 620 3 HEM B 201 NB 98.3 87.7 REMARK 620 4 HEM B 201 NC 97.1 171.4 87.3 REMARK 620 5 HEM B 201 ND 86.1 92.1 175.6 92.4 REMARK 620 6 HIS B 83 NE2 173.0 91.3 88.6 81.6 87.1 REMARK 620 N 1 2 3 4 5 DBREF 7OHD A 1 44 UNP Q9ER97 NGB_MOUSE 1 56 DBREF 7OHD A 44 138 UNP Q9ER97 NGB_MOUSE 57 151 DBREF 7OHD B 1 44 UNP Q9ER97 NGB_MOUSE 1 56 DBREF 7OHD B 44 138 UNP Q9ER97 NGB_MOUSE 57 151 SEQADV 7OHD HIS A 0 UNP Q9ER97 EXPRESSION TAG SEQADV 7OHD A UNP Q9ER97 GLN 43 DELETION SEQADV 7OHD A UNP Q9ER97 TYR 44 DELETION SEQADV 7OHD A UNP Q9ER97 ASN 45 DELETION SEQADV 7OHD A UNP Q9ER97 GLY 46 DELETION SEQADV 7OHD A UNP Q9ER97 ARG 47 DELETION SEQADV 7OHD A UNP Q9ER97 GLN 48 DELETION SEQADV 7OHD A UNP Q9ER97 PHE 49 DELETION SEQADV 7OHD A UNP Q9ER97 SER 50 DELETION SEQADV 7OHD A UNP Q9ER97 SER 51 DELETION SEQADV 7OHD A UNP Q9ER97 PRO 52 DELETION SEQADV 7OHD A UNP Q9ER97 GLU 53 DELETION SEQADV 7OHD A UNP Q9ER97 ASP 54 DELETION SEQADV 7OHD A UNP Q9ER97 CYS 55 DELETION SEQADV 7OHD A UNP Q9ER97 LEU 56 DELETION SEQADV 7OHD GLY A 43 UNP Q9ER97 LINKER SEQADV 7OHD SER A 107 UNP Q9ER97 CYS 120 ENGINEERED MUTATION SEQADV 7OHD HIS B 0 UNP Q9ER97 EXPRESSION TAG SEQADV 7OHD B UNP Q9ER97 GLN 43 DELETION SEQADV 7OHD B UNP Q9ER97 TYR 44 DELETION SEQADV 7OHD B UNP Q9ER97 ASN 45 DELETION SEQADV 7OHD B UNP Q9ER97 GLY 46 DELETION SEQADV 7OHD B UNP Q9ER97 ARG 47 DELETION SEQADV 7OHD B UNP Q9ER97 GLN 48 DELETION SEQADV 7OHD B UNP Q9ER97 PHE 49 DELETION SEQADV 7OHD B UNP Q9ER97 SER 50 DELETION SEQADV 7OHD B UNP Q9ER97 SER 51 DELETION SEQADV 7OHD B UNP Q9ER97 PRO 52 DELETION SEQADV 7OHD B UNP Q9ER97 GLU 53 DELETION SEQADV 7OHD B UNP Q9ER97 ASP 54 DELETION SEQADV 7OHD B UNP Q9ER97 CYS 55 DELETION SEQADV 7OHD B UNP Q9ER97 LEU 56 DELETION SEQADV 7OHD GLY B 43 UNP Q9ER97 LINKER SEQADV 7OHD SER B 107 UNP Q9ER97 CYS 120 ENGINEERED MUTATION SEQRES 1 A 139 HIS MET GLU ARG PRO GLU SER GLU LEU ILE ARG GLN SER SEQRES 2 A 139 TRP ARG VAL VAL SER ARG SER PRO LEU GLU HIS GLY THR SEQRES 3 A 139 VAL LEU PHE ALA ARG LEU PHE ALA LEU GLU PRO SER LEU SEQRES 4 A 139 LEU PRO LEU PHE GLY SER SER PRO GLU PHE LEU ASP HIS SEQRES 5 A 139 ILE ARG LYS VAL MET LEU VAL ILE ASP ALA ALA VAL THR SEQRES 6 A 139 ASN VAL GLU ASP LEU SER SER LEU GLU GLU TYR LEU THR SEQRES 7 A 139 SER LEU GLY ARG LYS HIS ARG ALA VAL GLY VAL ARG LEU SEQRES 8 A 139 SER SER PHE SER THR VAL GLY GLU SER LEU LEU TYR MET SEQRES 9 A 139 LEU GLU LYS SER LEU GLY PRO ASP PHE THR PRO ALA THR SEQRES 10 A 139 ARG THR ALA TRP SER ARG LEU TYR GLY ALA VAL VAL GLN SEQRES 11 A 139 ALA MET SER ARG GLY TRP ASP GLY GLU SEQRES 1 B 139 HIS MET GLU ARG PRO GLU SER GLU LEU ILE ARG GLN SER SEQRES 2 B 139 TRP ARG VAL VAL SER ARG SER PRO LEU GLU HIS GLY THR SEQRES 3 B 139 VAL LEU PHE ALA ARG LEU PHE ALA LEU GLU PRO SER LEU SEQRES 4 B 139 LEU PRO LEU PHE GLY SER SER PRO GLU PHE LEU ASP HIS SEQRES 5 B 139 ILE ARG LYS VAL MET LEU VAL ILE ASP ALA ALA VAL THR SEQRES 6 B 139 ASN VAL GLU ASP LEU SER SER LEU GLU GLU TYR LEU THR SEQRES 7 B 139 SER LEU GLY ARG LYS HIS ARG ALA VAL GLY VAL ARG LEU SEQRES 8 B 139 SER SER PHE SER THR VAL GLY GLU SER LEU LEU TYR MET SEQRES 9 B 139 LEU GLU LYS SER LEU GLY PRO ASP PHE THR PRO ALA THR SEQRES 10 B 139 ARG THR ALA TRP SER ARG LEU TYR GLY ALA VAL VAL GLN SEQRES 11 B 139 ALA MET SER ARG GLY TRP ASP GLY GLU HET HEM A 201 86 HET SO4 A 202 5 HET GOL A 203 5 HET SO4 A 204 5 HET GOL A 205 6 HET IPA A 206 4 HET BTB A 207 14 HET HEM B 201 86 HET IPA B 202 4 HET GOL B 203 10 HET GOL B 204 6 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM IPA ISOPROPYL ALCOHOL HETNAM BTB 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL- HETNAM 2 BTB PROPANE-1,3-DIOL HETSYN HEM HEME HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN IPA 2-PROPANOL HETSYN BTB BIS-TRIS BUFFER FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 SO4 2(O4 S 2-) FORMUL 5 GOL 4(C3 H8 O3) FORMUL 8 IPA 2(C3 H8 O) FORMUL 9 BTB C8 H19 N O5 FORMUL 14 HOH *89(H2 O) HELIX 1 AA1 PRO A 4 ARG A 18 1 15 HELIX 2 AA2 SER A 19 GLU A 35 1 17 HELIX 3 AA3 PRO A 36 PHE A 42 5 7 HELIX 4 AA4 SER A 44 ASN A 65 1 22 HELIX 5 AA5 ASP A 68 SER A 71 5 4 HELIX 6 AA6 LEU A 72 VAL A 86 1 15 HELIX 7 AA7 SER A 91 GLY A 109 1 19 HELIX 8 AA8 PRO A 110 PHE A 112 5 3 HELIX 9 AA9 THR A 113 ARG A 133 1 21 HELIX 10 AB1 GLY A 134 ASP A 136 5 3 HELIX 11 AB2 GLU B 2 ARG B 18 1 17 HELIX 12 AB3 SER B 19 GLU B 35 1 17 HELIX 13 AB4 PRO B 36 PHE B 42 5 7 HELIX 14 AB5 GLU B 47 ASN B 65 1 19 HELIX 15 AB6 ASP B 68 SER B 71 5 4 HELIX 16 AB7 LEU B 72 VAL B 86 1 15 HELIX 17 AB8 SER B 91 GLY B 109 1 19 HELIX 18 AB9 PRO B 110 PHE B 112 5 3 HELIX 19 AC1 THR B 113 ARG B 133 1 21 LINK NE2AHIS A 51 FE AHEM A 201 1555 1555 2.01 LINK NE2BHIS A 51 FE BHEM A 201 1555 1555 2.15 LINK NE2AHIS A 83 FE AHEM A 201 1555 1555 1.99 LINK NE2BHIS A 83 FE BHEM A 201 1555 1555 2.07 LINK NE2AHIS B 51 FE AHEM B 201 1555 1555 2.07 LINK NE2BHIS B 51 FE BHEM B 201 1555 1555 2.10 LINK NE2AHIS B 83 FE AHEM B 201 1555 1555 2.30 LINK NE2BHIS B 83 FE BHEM B 201 1555 1555 1.88 CRYST1 95.941 95.941 58.560 90.00 90.00 120.00 P 63 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010423 0.006018 0.000000 0.00000 SCALE2 0.000000 0.012036 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017077 0.00000