HEADER TRANSFERASE 11-MAY-21 7OHG TITLE STRUCTURE OF THERMUS THERMOPHILUS REL BOUND TO THE NON-HYDROLASABLE TITLE 2 ALARMONE ANALOGUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 GENE: TTHHC11_17770; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GTP / GDP PYROPHOSPHO-HYDROLASE, PPGPP, ALARMONES, REL, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.GARCIA-PINO REVDAT 2 31-JAN-24 7OHG 1 REMARK REVDAT 1 01-JUN-22 7OHG 0 JRNL AUTH A.GARCIA-PINO JRNL TITL STRUCTURE OF THERMUS THERMOPHILUS REL BOUND TO THE JRNL TITL 2 NON-HYDROLASABLE ALARMONE ANALOGUE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 (20-MAY-2020) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 88.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 55.4 REMARK 3 NUMBER OF REFLECTIONS : 14157 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 688 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.76 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.10 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 394 REMARK 3 BIN R VALUE (WORKING SET) : 0.2668 REMARK 3 BIN FREE R VALUE : 0.3784 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.52 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2754 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 102 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 74.46 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.15080 REMARK 3 B22 (A**2) : 1.15080 REMARK 3 B33 (A**2) : -2.30150 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.390 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.803 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.342 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.689 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.339 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.910 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2875 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3906 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1025 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 497 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2875 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 371 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2409 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.98 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.02 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.92 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 66.0072 49.4455 19.0260 REMARK 3 T TENSOR REMARK 3 T11: -0.1327 T22: 0.0996 REMARK 3 T33: -0.0470 T12: -0.0390 REMARK 3 T13: 0.0741 T23: -0.0439 REMARK 3 L TENSOR REMARK 3 L11: 0.5000 L22: 0.5730 REMARK 3 L33: 3.0223 L12: -0.1882 REMARK 3 L13: -1.0068 L23: 0.3125 REMARK 3 S TENSOR REMARK 3 S11: 0.2574 S12: 0.0734 S13: 0.1837 REMARK 3 S21: 0.0694 S22: -0.0040 S23: 0.0073 REMARK 3 S31: -0.1675 S32: 0.1436 S33: -0.2534 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7OHG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1292115780. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 12M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14157 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.507 REMARK 200 RESOLUTION RANGE LOW (A) : 88.120 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 23.00 REMARK 200 R MERGE (I) : 0.15600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.04800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6S2V REMARK 200 REMARK 200 REMARK: LONG RODS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8 % W/V PEG 20000; 0.05 M TRIS 8.5; REMARK 280 1.2 M SODIUM FORMATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 295.16K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+3/4 REMARK 290 8555 -Y,-X,-Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.44450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.72225 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 137.16675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 91.44450 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 137.16675 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 45.72225 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 GLY A 3 REMARK 465 ALA A 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 6 CG CD1 CD2 REMARK 470 GLU A 117 CG CD OE1 OE2 REMARK 470 ARG A 121 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 160 CG CD OE1 OE2 REMARK 470 ARG A 164 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 200 CG CD OE1 OE2 REMARK 470 GLN A 210 CG CD OE1 NE2 REMARK 470 GLN A 213 CG CD OE1 NE2 REMARK 470 GLU A 214 CG CD OE1 OE2 REMARK 470 GLU A 217 CG CD OE1 OE2 REMARK 470 HIS A 225 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 228 CD OE1 NE2 REMARK 470 ARG A 233 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 259 CG CD CE NZ REMARK 470 ARG A 262 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 267 CG CD1 CD2 REMARK 470 GLU A 268 CG CD OE1 OE2 REMARK 470 ARG A 288 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 318 NZ REMARK 470 LEU A 339 CG CD1 CD2 REMARK 470 GLU A 340 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 120 108.66 -58.16 REMARK 500 HIS A 156 37.00 -88.48 REMARK 500 ILE A 172 -63.89 -103.47 REMARK 500 GLN A 297 -37.75 -39.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 598 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A 599 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A 600 DISTANCE = 6.90 ANGSTROMS REMARK 525 HOH A 601 DISTANCE = 7.54 ANGSTROMS REMARK 525 HOH A 602 DISTANCE = 13.87 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 404 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 52 NE2 REMARK 620 2 HIS A 76 NE2 78.9 REMARK 620 3 ASP A 77 OD2 80.6 73.6 REMARK 620 4 ASP A 146 OD1 83.3 73.1 145.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 405 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VE8 A 401 O17 REMARK 620 2 VE8 A 401 O15 77.5 REMARK 620 N 1 DBREF1 7OHG A 1 355 UNP A0A510IKK7_THETH DBREF2 7OHG A A0A510IKK7 1 355 SEQRES 1 A 355 MET VAL GLY ALA ASP LEU GLY LEU TRP ASN ARG LEU GLU SEQRES 2 A 355 PRO ALA LEU ALA TYR LEU ALA PRO GLU GLU ARG ALA LYS SEQRES 3 A 355 VAL ARG GLU ALA TYR ARG PHE ALA GLU GLU ALA HIS ARG SEQRES 4 A 355 GLY GLN LEU ARG ARG SER GLY GLU PRO TYR ILE THR HIS SEQRES 5 A 355 PRO VAL ALA VAL ALA GLU ILE LEU ALA GLY LEU GLN MET SEQRES 6 A 355 ASP ALA ASP THR VAL ALA ALA GLY LEU LEU HIS ASP THR SEQRES 7 A 355 LEU GLU ASP CYS GLY VAL ALA PRO GLU GLU LEU GLU ARG SEQRES 8 A 355 ARG PHE GLY PRO THR VAL ARG ARG ILE VAL GLU GLY GLU SEQRES 9 A 355 THR LYS VAL SER LYS LEU TYR LYS LEU ALA ASN LEU GLU SEQRES 10 A 355 GLY GLU GLU ARG ARG ALA GLU ASP LEU ARG GLN MET PHE SEQRES 11 A 355 ILE ALA MET ALA GLU ASP VAL ARG ILE ILE ILE VAL LYS SEQRES 12 A 355 LEU ALA ASP ARG LEU HIS ASN LEU ARG THR LEU GLU HIS SEQRES 13 A 355 MET PRO PRO GLU LYS GLN LYS ARG ILE ALA GLN GLU THR SEQRES 14 A 355 LEU GLU ILE TYR ALA PRO LEU ALA HIS ARG LEU GLY MET SEQRES 15 A 355 GLY GLN LEU LYS TRP GLU LEU GLU ASP LEU SER PHE ARG SEQRES 16 A 355 TYR LEU HIS PRO GLU ALA PHE ALA SER LEU SER ALA ARG SEQRES 17 A 355 ILE GLN ALA THR GLN GLU ALA ARG GLU ARG LEU ILE GLN SEQRES 18 A 355 LYS ALA ILE HIS LEU LEU GLN GLU THR LEU ALA ARG ASP SEQRES 19 A 355 GLU LEU LEU GLN SER GLN LEU GLN GLY PHE GLU VAL THR SEQRES 20 A 355 GLY ARG PRO LYS HIS LEU TYR SER ILE TRP LYS LYS MET SEQRES 21 A 355 GLU ARG GLU GLY LYS THR LEU GLU GLN ILE TYR ASP LEU SEQRES 22 A 355 LEU ALA VAL ARG VAL ILE LEU ASP PRO LYS PRO ALA PRO SEQRES 23 A 355 THR ARG GLU SER GLN ALA LEU ARG GLU LYS GLN VAL CYS SEQRES 24 A 355 TYR HIS VAL LEU GLY LEU VAL HIS ALA LEU TRP GLN PRO SEQRES 25 A 355 ILE PRO GLY ARG VAL LYS ASP TYR ILE ALA VAL PRO LYS SEQRES 26 A 355 PRO ASN GLY TYR GLN SER LEU HIS THR THR VAL ILE ALA SEQRES 27 A 355 LEU GLU GLY LEU PRO LEU GLU VAL GLN ILE ARG THR ARG SEQRES 28 A 355 GLU MET HIS ARG HET VE8 A 401 40 HET GOL A 402 6 HET FMT A 403 3 HET MN A 404 1 HET MG A 405 1 HET CL A 406 1 HET CL A 407 1 HET CL A 408 1 HET CL A 409 1 HET CL A 410 1 HETNAM VE8 NON-HYDROLASABLE ALARMONE ANALOGUE HETNAM GOL GLYCEROL HETNAM FMT FORMIC ACID HETNAM MN MANGANESE (II) ION HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETSYN VE8 ~{N}-[(2~{S},3~{S},4~{R},5~{R})-5-(2-AZANYL-6- HETSYN 2 VE8 OXIDANYLIDENE-1~{H}-PURIN-9-YL)-4-OXIDANYL-2- HETSYN 3 VE8 [[OXIDANYL-[OXIDANYL(PHOSPHONOOXY)PHOSPHORYL]OXY- HETSYN 4 VE8 PHOSPHORYL]OXYMETHYL]OXOLAN-3-YL]-PHOSPHONOOXY- HETSYN 5 VE8 PHOSPHONAMIDIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 VE8 C10 H19 N6 O19 P5 FORMUL 3 GOL C3 H8 O3 FORMUL 4 FMT C H2 O2 FORMUL 5 MN MN 2+ FORMUL 6 MG MG 2+ FORMUL 7 CL 5(CL 1-) FORMUL 12 HOH *102(H2 O) HELIX 1 AA1 GLY A 7 LEU A 16 1 10 HELIX 2 AA2 ALA A 20 HIS A 38 1 19 HELIX 3 AA3 ILE A 50 LEU A 63 1 14 HELIX 4 AA4 ASP A 66 HIS A 76 1 11 HELIX 5 AA5 ASP A 77 CYS A 82 1 6 HELIX 6 AA6 ALA A 85 ALA A 114 1 30 HELIX 7 AA7 ARG A 121 ALA A 134 1 14 HELIX 8 AA8 VAL A 137 THR A 153 1 17 HELIX 9 AA9 LEU A 154 MET A 157 5 4 HELIX 10 AB1 PRO A 158 ILE A 172 1 15 HELIX 11 AB2 ILE A 172 GLY A 181 1 10 HELIX 12 AB3 MET A 182 HIS A 198 1 17 HELIX 13 AB4 HIS A 198 ARG A 233 1 36 HELIX 14 AB5 ASP A 234 GLN A 240 1 7 HELIX 15 AB6 HIS A 252 GLY A 264 1 13 HELIX 16 AB7 THR A 287 TRP A 310 1 24 SHEET 1 AA1 5 LEU A 241 GLY A 248 0 SHEET 2 AA1 5 LEU A 274 PRO A 282 -1 O ASP A 281 N GLY A 243 SHEET 3 AA1 5 LEU A 342 THR A 350 1 O GLN A 347 N VAL A 278 SHEET 4 AA1 5 LEU A 332 ALA A 338 -1 N LEU A 332 O ILE A 348 SHEET 5 AA1 5 GLN A 311 PRO A 312 -1 N GLN A 311 O ILE A 337 SHEET 1 AA2 5 LEU A 241 GLY A 248 0 SHEET 2 AA2 5 LEU A 274 PRO A 282 -1 O ASP A 281 N GLY A 243 SHEET 3 AA2 5 LEU A 342 THR A 350 1 O GLN A 347 N VAL A 278 SHEET 4 AA2 5 LEU A 332 ALA A 338 -1 N LEU A 332 O ILE A 348 SHEET 5 AA2 5 LYS A 318 ASP A 319 -1 N LYS A 318 O HIS A 333 LINK NE2 HIS A 52 MN MN A 404 1555 1555 2.43 LINK NE2 HIS A 76 MN MN A 404 1555 1555 2.67 LINK OD2 ASP A 77 MN MN A 404 1555 1555 2.58 LINK OD1 ASP A 146 MN MN A 404 1555 1555 2.08 LINK O17 VE8 A 401 MG MG A 405 1555 1555 2.57 LINK O15 VE8 A 401 MG MG A 405 1555 1555 2.08 CRYST1 88.121 88.121 182.889 90.00 90.00 90.00 P 41 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011348 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011348 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005468 0.00000