HEADER TRANSFERASE 17-MAY-21 7OJQ TITLE CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA LPXA IN COMPLEX WITH TITLE 2 COMPOUND 7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAMINE O- COMPND 3 ACYLTRANSFERASE; COMPND 4 CHAIN: A, B, C; COMPND 5 FRAGMENT: FULL-LENGTH PROTEIN; COMPND 6 SYNONYM: UDP-N-ACETYLGLUCOSAMINE ACYLTRANSFERASE; COMPND 7 EC: 2.3.1.129; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA (STRAIN PA7); SOURCE 3 ORGANISM_TAXID: 381754; SOURCE 4 STRAIN: PA7; SOURCE 5 GENE: LPXA, PSPA7_1495; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS ACYLTRANSFERASE, FATTY ACIDS, LIPID A, LEFT-HANDED PARALLEL BETA- KEYWDS 2 HELIX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.D.RYAN,A.L.PARKES,M.SOUTHEY,O.A.ANDERSEN,M.ZAHN,J.BARKER, AUTHOR 2 B.L.M.DEJONGE REVDAT 3 31-JAN-24 7OJQ 1 REMARK REVDAT 2 27-OCT-21 7OJQ 1 JRNL REVDAT 1 13-OCT-21 7OJQ 0 JRNL AUTH M.D.RYAN,A.L.PARKES,D.CORBETT,A.P.DICKIE,M.SOUTHEY, JRNL AUTH 2 O.A.ANDERSEN,D.B.STEIN,O.R.BARBEAU,A.SANZONE,P.THOMMES, JRNL AUTH 3 J.BARKER,R.CAIN,C.COMPPER,M.DEJOB,A.DORALI,D.ETHERIDGE, JRNL AUTH 4 S.EVANS,A.FAULKNER,E.GADOULEAU,T.GORMAN,D.HAASE, JRNL AUTH 5 M.HOLBROW-WILSHAW,T.KRULLE,X.LI,C.LUMLEY,B.MERTINS,S.NAPIER, JRNL AUTH 6 R.ODEDRA,K.PAPADOPOULOS,V.ROUMPELAKIS,K.SPEAR,E.TRIMBY, JRNL AUTH 7 J.WILLIAMS,M.ZAHN,A.D.KEEFE,Y.ZHANG,H.T.SOUTTER, JRNL AUTH 8 P.A.CENTRELLA,M.A.CLARK,J.W.CUOZZO,C.E.DUMELIN,B.DENG, JRNL AUTH 9 A.HUNT,E.A.SIGEL,D.M.TROAST,B.L.M.DEJONGE JRNL TITL DISCOVERY OF NOVEL UDP- N -ACETYLGLUCOSAMINE ACYLTRANSFERASE JRNL TITL 2 (LPXA) INHIBITORS WITH ACTIVITY AGAINST PSEUDOMONAS JRNL TITL 3 AERUGINOSA . JRNL REF J.MED.CHEM. V. 64 14377 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 34569791 JRNL DOI 10.1021/ACS.JMEDCHEM.1C00888 REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 111479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 5525 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.88 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2230 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2424 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2128 REMARK 3 BIN R VALUE (WORKING SET) : 0.2416 REMARK 3 BIN FREE R VALUE : 0.2602 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.57 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 102 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5817 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 84 REMARK 3 SOLVENT ATOMS : 286 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.84960 REMARK 3 B22 (A**2) : 6.84960 REMARK 3 B33 (A**2) : -13.69910 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.330 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.099 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.096 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.100 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.098 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6053 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 8216 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2039 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1076 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6053 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 796 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 7155 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.33 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.01 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|1 - A|258 } REMARK 3 ORIGIN FOR THE GROUP (A): -58.9642 -1.0296 19.3814 REMARK 3 T TENSOR REMARK 3 T11: -0.2060 T22: -0.1839 REMARK 3 T33: 0.1618 T12: -0.0164 REMARK 3 T13: -0.0746 T23: 0.0501 REMARK 3 L TENSOR REMARK 3 L11: 1.4522 L22: 2.2981 REMARK 3 L33: 1.0104 L12: -0.4927 REMARK 3 L13: -0.0293 L23: 0.4545 REMARK 3 S TENSOR REMARK 3 S11: -0.0295 S12: -0.0910 S13: -0.0281 REMARK 3 S21: 0.0737 S22: 0.0276 S23: 0.4085 REMARK 3 S31: -0.0295 S32: -0.1079 S33: 0.0019 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|1 - B|258 } REMARK 3 ORIGIN FOR THE GROUP (A): -31.2715 13.4880 17.1910 REMARK 3 T TENSOR REMARK 3 T11: -0.1430 T22: -0.2022 REMARK 3 T33: 0.1136 T12: -0.0369 REMARK 3 T13: -0.0703 T23: 0.0531 REMARK 3 L TENSOR REMARK 3 L11: 1.4255 L22: 2.7232 REMARK 3 L33: 1.1382 L12: 0.0977 REMARK 3 L13: -0.0265 L23: 1.0522 REMARK 3 S TENSOR REMARK 3 S11: -0.0392 S12: 0.0249 S13: 0.2844 REMARK 3 S21: -0.2461 S22: 0.0563 S23: -0.0284 REMARK 3 S31: -0.2439 S32: 0.1037 S33: -0.0171 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|1 - C|258 } REMARK 3 ORIGIN FOR THE GROUP (A): -36.6484 -6.7849 40.2226 REMARK 3 T TENSOR REMARK 3 T11: -0.2066 T22: -0.1233 REMARK 3 T33: 0.0242 T12: -0.0165 REMARK 3 T13: -0.0593 T23: 0.0544 REMARK 3 L TENSOR REMARK 3 L11: 2.0892 L22: 2.3199 REMARK 3 L33: 1.0952 L12: -0.5085 REMARK 3 L13: -0.4141 L23: 0.3893 REMARK 3 S TENSOR REMARK 3 S11: -0.0678 S12: -0.4938 S13: 0.0554 REMARK 3 S21: 0.3674 S22: 0.0201 S23: 0.0584 REMARK 3 S31: -0.0629 S32: 0.0523 S33: 0.0478 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7OJQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-MAY-21. REMARK 100 THE DEPOSITION ID IS D_1292115875. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 111525 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 59.530 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5DEM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 M NH4CL, 0.1 M NA ACETATE PH 4.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 83.34000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 83.34000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.46500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 83.34000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 24.73250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 83.34000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 74.19750 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 83.34000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 83.34000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 49.46500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 83.34000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 74.19750 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 83.34000 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 24.73250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 LYS A 72 REMARK 465 TYR A 73 REMARK 465 LYS A 74 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 ASP B 70 REMARK 465 LEU B 71 REMARK 465 LYS B 72 REMARK 465 TYR B 73 REMARK 465 LYS B 74 REMARK 465 GLY B 75 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 ASP C 70 REMARK 465 LEU C 71 REMARK 465 LYS C 72 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 69 22.42 -71.25 REMARK 500 ASP A 70 117.10 -168.39 REMARK 500 THR A 98 128.92 179.97 REMARK 500 ASN A 133 127.13 -30.79 REMARK 500 HIS A 164 15.78 59.08 REMARK 500 TYR A 180 -9.46 68.82 REMARK 500 SER A 192 -151.30 -161.06 REMARK 500 ASN B 133 127.22 -35.84 REMARK 500 TYR B 158 -4.96 73.75 REMARK 500 TYR B 180 -14.06 70.75 REMARK 500 SER B 192 -153.19 -161.35 REMARK 500 ASN C 133 127.54 -33.40 REMARK 500 TYR C 180 -15.72 71.50 REMARK 500 SER C 192 -157.86 -160.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VJE A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VJE B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VJE C 301 DBREF 7OJQ A 1 258 UNP A6V1E4 LPXA_PSEA7 1 258 DBREF 7OJQ B 1 258 UNP A6V1E4 LPXA_PSEA7 1 258 DBREF 7OJQ C 1 258 UNP A6V1E4 LPXA_PSEA7 1 258 SEQADV 7OJQ GLY A -2 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJQ SER A -1 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJQ HIS A 0 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJQ GLY B -2 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJQ SER B -1 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJQ HIS B 0 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJQ GLY C -2 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJQ SER C -1 UNP A6V1E4 EXPRESSION TAG SEQADV 7OJQ HIS C 0 UNP A6V1E4 EXPRESSION TAG SEQRES 1 A 261 GLY SER HIS MET SER LEU ILE ASP PRO ARG ALA ILE ILE SEQRES 2 A 261 ASP PRO SER ALA ARG LEU ALA ALA ASP VAL GLN VAL GLY SEQRES 3 A 261 PRO TRP SER ILE VAL GLY ALA GLU VAL GLU ILE GLY GLU SEQRES 4 A 261 GLY THR VAL ILE GLY PRO HIS VAL VAL LEU LYS GLY PRO SEQRES 5 A 261 THR LYS ILE GLY LYS HIS ASN ARG ILE TYR GLN PHE SER SEQRES 6 A 261 SER VAL GLY GLU ASP THR PRO ASP LEU LYS TYR LYS GLY SEQRES 7 A 261 GLU PRO THR ARG LEU VAL ILE GLY ASP HIS ASN VAL ILE SEQRES 8 A 261 ARG GLU GLY VAL THR ILE HIS ARG GLY THR VAL GLN ASP SEQRES 9 A 261 ARG ALA GLU THR THR ILE GLY ASP HIS ASN LEU ILE MET SEQRES 10 A 261 ALA TYR ALA HIS ILE GLY HIS ASP SER VAL ILE GLY ASN SEQRES 11 A 261 HIS CYS ILE LEU VAL ASN ASN THR ALA LEU ALA GLY HIS SEQRES 12 A 261 VAL HIS VAL ASP ASP TRP ALA ILE LEU SER GLY TYR THR SEQRES 13 A 261 LEU VAL HIS GLN TYR CYS ARG ILE GLY ALA HIS SER PHE SEQRES 14 A 261 SER GLY MET GLY SER ALA ILE GLY LYS ASP VAL PRO ALA SEQRES 15 A 261 TYR VAL THR VAL PHE GLY ASN PRO ALA GLU ALA ARG SER SEQRES 16 A 261 MET ASN PHE GLU GLY MET ARG ARG ARG GLY PHE SER SER SEQRES 17 A 261 GLU ALA ILE HIS ALA LEU ARG ARG ALA TYR LYS VAL VAL SEQRES 18 A 261 TYR ARG GLN GLY HIS THR VAL GLU GLU ALA LEU ALA GLU SEQRES 19 A 261 LEU ALA GLU SER ALA ALA GLN PHE PRO GLU VAL ALA VAL SEQRES 20 A 261 PHE ARG ASP SER ILE GLN SER ALA THR ARG GLY ILE THR SEQRES 21 A 261 ARG SEQRES 1 B 261 GLY SER HIS MET SER LEU ILE ASP PRO ARG ALA ILE ILE SEQRES 2 B 261 ASP PRO SER ALA ARG LEU ALA ALA ASP VAL GLN VAL GLY SEQRES 3 B 261 PRO TRP SER ILE VAL GLY ALA GLU VAL GLU ILE GLY GLU SEQRES 4 B 261 GLY THR VAL ILE GLY PRO HIS VAL VAL LEU LYS GLY PRO SEQRES 5 B 261 THR LYS ILE GLY LYS HIS ASN ARG ILE TYR GLN PHE SER SEQRES 6 B 261 SER VAL GLY GLU ASP THR PRO ASP LEU LYS TYR LYS GLY SEQRES 7 B 261 GLU PRO THR ARG LEU VAL ILE GLY ASP HIS ASN VAL ILE SEQRES 8 B 261 ARG GLU GLY VAL THR ILE HIS ARG GLY THR VAL GLN ASP SEQRES 9 B 261 ARG ALA GLU THR THR ILE GLY ASP HIS ASN LEU ILE MET SEQRES 10 B 261 ALA TYR ALA HIS ILE GLY HIS ASP SER VAL ILE GLY ASN SEQRES 11 B 261 HIS CYS ILE LEU VAL ASN ASN THR ALA LEU ALA GLY HIS SEQRES 12 B 261 VAL HIS VAL ASP ASP TRP ALA ILE LEU SER GLY TYR THR SEQRES 13 B 261 LEU VAL HIS GLN TYR CYS ARG ILE GLY ALA HIS SER PHE SEQRES 14 B 261 SER GLY MET GLY SER ALA ILE GLY LYS ASP VAL PRO ALA SEQRES 15 B 261 TYR VAL THR VAL PHE GLY ASN PRO ALA GLU ALA ARG SER SEQRES 16 B 261 MET ASN PHE GLU GLY MET ARG ARG ARG GLY PHE SER SER SEQRES 17 B 261 GLU ALA ILE HIS ALA LEU ARG ARG ALA TYR LYS VAL VAL SEQRES 18 B 261 TYR ARG GLN GLY HIS THR VAL GLU GLU ALA LEU ALA GLU SEQRES 19 B 261 LEU ALA GLU SER ALA ALA GLN PHE PRO GLU VAL ALA VAL SEQRES 20 B 261 PHE ARG ASP SER ILE GLN SER ALA THR ARG GLY ILE THR SEQRES 21 B 261 ARG SEQRES 1 C 261 GLY SER HIS MET SER LEU ILE ASP PRO ARG ALA ILE ILE SEQRES 2 C 261 ASP PRO SER ALA ARG LEU ALA ALA ASP VAL GLN VAL GLY SEQRES 3 C 261 PRO TRP SER ILE VAL GLY ALA GLU VAL GLU ILE GLY GLU SEQRES 4 C 261 GLY THR VAL ILE GLY PRO HIS VAL VAL LEU LYS GLY PRO SEQRES 5 C 261 THR LYS ILE GLY LYS HIS ASN ARG ILE TYR GLN PHE SER SEQRES 6 C 261 SER VAL GLY GLU ASP THR PRO ASP LEU LYS TYR LYS GLY SEQRES 7 C 261 GLU PRO THR ARG LEU VAL ILE GLY ASP HIS ASN VAL ILE SEQRES 8 C 261 ARG GLU GLY VAL THR ILE HIS ARG GLY THR VAL GLN ASP SEQRES 9 C 261 ARG ALA GLU THR THR ILE GLY ASP HIS ASN LEU ILE MET SEQRES 10 C 261 ALA TYR ALA HIS ILE GLY HIS ASP SER VAL ILE GLY ASN SEQRES 11 C 261 HIS CYS ILE LEU VAL ASN ASN THR ALA LEU ALA GLY HIS SEQRES 12 C 261 VAL HIS VAL ASP ASP TRP ALA ILE LEU SER GLY TYR THR SEQRES 13 C 261 LEU VAL HIS GLN TYR CYS ARG ILE GLY ALA HIS SER PHE SEQRES 14 C 261 SER GLY MET GLY SER ALA ILE GLY LYS ASP VAL PRO ALA SEQRES 15 C 261 TYR VAL THR VAL PHE GLY ASN PRO ALA GLU ALA ARG SER SEQRES 16 C 261 MET ASN PHE GLU GLY MET ARG ARG ARG GLY PHE SER SER SEQRES 17 C 261 GLU ALA ILE HIS ALA LEU ARG ARG ALA TYR LYS VAL VAL SEQRES 18 C 261 TYR ARG GLN GLY HIS THR VAL GLU GLU ALA LEU ALA GLU SEQRES 19 C 261 LEU ALA GLU SER ALA ALA GLN PHE PRO GLU VAL ALA VAL SEQRES 20 C 261 PHE ARG ASP SER ILE GLN SER ALA THR ARG GLY ILE THR SEQRES 21 C 261 ARG HET VJE A 301 28 HET VJE B 301 28 HET VJE C 301 28 HETNAM VJE 2-(2-CHLOROPHENYL)SULFANYL-~{N}-[(4-CYANOPHENYL) HETNAM 2 VJE METHYL]-~{N}-[(5-METHYL-1,3,4-OXADIAZOL-2-YL) HETNAM 3 VJE METHYL]ETHANAMIDE FORMUL 4 VJE 3(C20 H17 CL N4 O2 S) FORMUL 7 HOH *286(H2 O) HELIX 1 AA1 ASN A 194 ARG A 201 1 8 HELIX 2 AA2 SER A 204 ARG A 220 1 17 HELIX 3 AA3 THR A 224 PHE A 239 1 16 HELIX 4 AA4 PHE A 239 SER A 251 1 13 HELIX 5 AA5 ASN B 194 ARG B 201 1 8 HELIX 6 AA6 SER B 204 ARG B 220 1 17 HELIX 7 AA7 THR B 224 PHE B 239 1 16 HELIX 8 AA8 PHE B 239 SER B 251 1 13 HELIX 9 AA9 ASN C 194 ARG C 201 1 8 HELIX 10 AB1 SER C 204 ARG C 220 1 17 HELIX 11 AB2 THR C 224 PHE C 239 1 16 HELIX 12 AB3 PHE C 239 SER C 251 1 13 SHEET 1 AA1 9 ILE A 9 ILE A 10 0 SHEET 2 AA1 9 ILE A 27 VAL A 28 1 O VAL A 28 N ILE A 9 SHEET 3 AA1 9 VAL A 45 LEU A 46 1 O LEU A 46 N ILE A 27 SHEET 4 AA1 9 SER A 63 GLU A 66 1 O VAL A 64 N VAL A 45 SHEET 5 AA1 9 THR A 93 HIS A 95 1 O ILE A 94 N GLY A 65 SHEET 6 AA1 9 HIS A 118 ILE A 119 1 O ILE A 119 N HIS A 95 SHEET 7 AA1 9 ALA A 136 LEU A 137 1 O LEU A 137 N HIS A 118 SHEET 8 AA1 9 LEU A 154 VAL A 155 1 O VAL A 155 N ALA A 136 SHEET 9 AA1 9 ALA A 172 ILE A 173 1 O ILE A 173 N LEU A 154 SHEET 1 AA2 8 ARG A 15 LEU A 16 0 SHEET 2 AA2 8 VAL A 32 ILE A 34 1 O ILE A 34 N ARG A 15 SHEET 3 AA2 8 THR A 50 ILE A 52 1 O THR A 50 N GLU A 33 SHEET 4 AA2 8 LEU A 80 ILE A 82 1 O ILE A 82 N LYS A 51 SHEET 5 AA2 8 THR A 105 ILE A 107 1 O THR A 105 N VAL A 81 SHEET 6 AA2 8 VAL A 124 ILE A 125 1 O ILE A 125 N THR A 106 SHEET 7 AA2 8 HIS A 142 VAL A 143 1 O VAL A 143 N VAL A 124 SHEET 8 AA2 8 ARG A 160 ILE A 161 1 O ILE A 161 N HIS A 142 SHEET 1 AA310 GLN A 21 VAL A 22 0 SHEET 2 AA310 VAL A 39 ILE A 40 1 O ILE A 40 N GLN A 21 SHEET 3 AA310 ARG A 57 ILE A 58 1 O ILE A 58 N VAL A 39 SHEET 4 AA310 VAL A 87 ILE A 88 1 O ILE A 88 N ARG A 57 SHEET 5 AA310 LEU A 112 ILE A 113 1 O ILE A 113 N VAL A 87 SHEET 6 AA310 ILE A 130 LEU A 131 1 O LEU A 131 N LEU A 112 SHEET 7 AA310 ILE A 148 LEU A 149 1 O LEU A 149 N ILE A 130 SHEET 8 AA310 PHE A 166 SER A 167 1 O SER A 167 N ILE A 148 SHEET 9 AA310 VAL A 181 PHE A 184 1 O VAL A 181 N PHE A 166 SHEET 10 AA310 GLU A 189 MET A 193 -1 O ARG A 191 N THR A 182 SHEET 1 AA4 9 ILE B 9 ILE B 10 0 SHEET 2 AA4 9 ILE B 27 VAL B 28 1 O VAL B 28 N ILE B 9 SHEET 3 AA4 9 VAL B 45 LEU B 46 1 O LEU B 46 N ILE B 27 SHEET 4 AA4 9 SER B 63 GLU B 66 1 O VAL B 64 N VAL B 45 SHEET 5 AA4 9 THR B 93 HIS B 95 1 O ILE B 94 N SER B 63 SHEET 6 AA4 9 HIS B 118 ILE B 119 1 O ILE B 119 N THR B 93 SHEET 7 AA4 9 ALA B 136 LEU B 137 1 O LEU B 137 N HIS B 118 SHEET 8 AA4 9 LEU B 154 VAL B 155 1 O VAL B 155 N ALA B 136 SHEET 9 AA4 9 ALA B 172 ILE B 173 1 O ILE B 173 N LEU B 154 SHEET 1 AA5 5 ARG B 15 LEU B 16 0 SHEET 2 AA5 5 VAL B 32 ILE B 34 1 O ILE B 34 N ARG B 15 SHEET 3 AA5 5 THR B 50 ILE B 52 1 O ILE B 52 N GLU B 33 SHEET 4 AA5 5 THR B 78 ILE B 82 1 O LEU B 80 N LYS B 51 SHEET 5 AA5 5 GLY B 97 THR B 98 -1 O GLY B 97 N ARG B 79 SHEET 1 AA6 8 ARG B 15 LEU B 16 0 SHEET 2 AA6 8 VAL B 32 ILE B 34 1 O ILE B 34 N ARG B 15 SHEET 3 AA6 8 THR B 50 ILE B 52 1 O ILE B 52 N GLU B 33 SHEET 4 AA6 8 THR B 78 ILE B 82 1 O LEU B 80 N LYS B 51 SHEET 5 AA6 8 THR B 105 ILE B 107 1 O THR B 105 N VAL B 81 SHEET 6 AA6 8 VAL B 124 ILE B 125 1 O ILE B 125 N THR B 106 SHEET 7 AA6 8 HIS B 142 VAL B 143 1 O VAL B 143 N VAL B 124 SHEET 8 AA6 8 ARG B 160 ILE B 161 1 O ILE B 161 N HIS B 142 SHEET 1 AA710 GLN B 21 VAL B 22 0 SHEET 2 AA710 VAL B 39 ILE B 40 1 O ILE B 40 N GLN B 21 SHEET 3 AA710 ARG B 57 ILE B 58 1 O ILE B 58 N VAL B 39 SHEET 4 AA710 VAL B 87 ILE B 88 1 O ILE B 88 N ARG B 57 SHEET 5 AA710 LEU B 112 ILE B 113 1 O ILE B 113 N VAL B 87 SHEET 6 AA710 ILE B 130 LEU B 131 1 O LEU B 131 N LEU B 112 SHEET 7 AA710 ILE B 148 LEU B 149 1 O LEU B 149 N ILE B 130 SHEET 8 AA710 PHE B 166 SER B 167 1 O SER B 167 N ILE B 148 SHEET 9 AA710 VAL B 181 PHE B 184 1 O VAL B 183 N PHE B 166 SHEET 10 AA710 GLU B 189 MET B 193 -1 O ARG B 191 N THR B 182 SHEET 1 AA8 9 ILE C 9 ILE C 10 0 SHEET 2 AA8 9 ILE C 27 VAL C 28 1 O VAL C 28 N ILE C 9 SHEET 3 AA8 9 VAL C 45 LEU C 46 1 O LEU C 46 N ILE C 27 SHEET 4 AA8 9 SER C 63 GLU C 66 1 O VAL C 64 N VAL C 45 SHEET 5 AA8 9 THR C 93 HIS C 95 1 O ILE C 94 N GLY C 65 SHEET 6 AA8 9 HIS C 118 ILE C 119 1 O ILE C 119 N THR C 93 SHEET 7 AA8 9 ALA C 136 LEU C 137 1 O LEU C 137 N HIS C 118 SHEET 8 AA8 9 LEU C 154 VAL C 155 1 O VAL C 155 N ALA C 136 SHEET 9 AA8 9 ALA C 172 ILE C 173 1 O ILE C 173 N LEU C 154 SHEET 1 AA9 5 ARG C 15 LEU C 16 0 SHEET 2 AA9 5 VAL C 32 ILE C 34 1 O ILE C 34 N ARG C 15 SHEET 3 AA9 5 THR C 50 ILE C 52 1 O ILE C 52 N GLU C 33 SHEET 4 AA9 5 THR C 78 ILE C 82 1 O ILE C 82 N LYS C 51 SHEET 5 AA9 5 GLY C 97 THR C 98 -1 O GLY C 97 N ARG C 79 SHEET 1 AB1 8 ARG C 15 LEU C 16 0 SHEET 2 AB1 8 VAL C 32 ILE C 34 1 O ILE C 34 N ARG C 15 SHEET 3 AB1 8 THR C 50 ILE C 52 1 O ILE C 52 N GLU C 33 SHEET 4 AB1 8 THR C 78 ILE C 82 1 O ILE C 82 N LYS C 51 SHEET 5 AB1 8 THR C 105 ILE C 107 1 O THR C 105 N VAL C 81 SHEET 6 AB1 8 VAL C 124 ILE C 125 1 O ILE C 125 N THR C 106 SHEET 7 AB1 8 HIS C 142 VAL C 143 1 O VAL C 143 N VAL C 124 SHEET 8 AB1 8 ARG C 160 ILE C 161 1 O ILE C 161 N HIS C 142 SHEET 1 AB210 GLN C 21 VAL C 22 0 SHEET 2 AB210 VAL C 39 ILE C 40 1 O ILE C 40 N GLN C 21 SHEET 3 AB210 ARG C 57 ILE C 58 1 O ILE C 58 N VAL C 39 SHEET 4 AB210 VAL C 87 ILE C 88 1 O ILE C 88 N ARG C 57 SHEET 5 AB210 LEU C 112 ILE C 113 1 O ILE C 113 N VAL C 87 SHEET 6 AB210 ILE C 130 LEU C 131 1 O LEU C 131 N LEU C 112 SHEET 7 AB210 ILE C 148 LEU C 149 1 O LEU C 149 N ILE C 130 SHEET 8 AB210 PHE C 166 SER C 167 1 O SER C 167 N ILE C 148 SHEET 9 AB210 VAL C 181 PHE C 184 1 O VAL C 183 N PHE C 166 SHEET 10 AB210 GLU C 189 MET C 193 -1 O SER C 192 N THR C 182 CISPEP 1 GLY A 48 PRO A 49 0 1.14 CISPEP 2 ASN A 186 PRO A 187 0 -1.01 CISPEP 3 GLY B 48 PRO B 49 0 0.13 CISPEP 4 ASN B 186 PRO B 187 0 -3.47 CISPEP 5 GLY C 48 PRO C 49 0 3.34 CISPEP 6 ASN C 186 PRO C 187 0 -0.41 SITE 1 AC1 8 LEU A 112 VAL A 132 ASN A 133 SER A 150 SITE 2 AC1 8 GLY A 151 HIS B 118 ALA B 138 GLN B 157 SITE 1 AC2 7 LEU B 112 VAL B 132 ASN B 133 SER B 150 SITE 2 AC2 7 GLY B 151 ALA C 138 GLN C 157 SITE 1 AC3 9 ASP A 70 HIS A 118 ALA A 136 ALA A 138 SITE 2 AC3 9 GLN A 157 VAL C 132 ASN C 133 SER C 150 SITE 3 AC3 9 GLY C 151 CRYST1 166.680 166.680 98.930 90.00 90.00 90.00 I 41 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006000 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010108 0.00000