HEADER TRANSFERASE 05-JUN-21 7ORE TITLE CRYSTAL STRUCTURE OF JNK3 IN COMPLEX WITH LIGHT-ACTIVATED COVALENT TITLE 2 INHIBITOR MR-II-249 WITH BOTH NON-COVALENT AND COVALENT BINDING MODES TITLE 3 (COMPOUND 4) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 10; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MAP KINASE 10,MAPK 10,MAP KINASE P49 3F12,STRESS-ACTIVATED COMPND 5 PROTEIN KINASE 1B,SAPK1B,STRESS-ACTIVATED PROTEIN KINASE JNK3,C-JUN COMPND 6 N-TERMINAL KINASE 3; COMPND 7 EC: 2.7.11.24; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAPK10, JNK3, JNK3A, PRKM10, SAPK1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: -R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS KINASE, MAPK, MAPK10, LIGHT ACTIVATION, COVALENT INHIBITOR, KEYWDS 2 STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, KEYWDS 3 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAIKUAD,M.REYNDERS,D.TRAUNER,S.KNAPP,STRUCTURAL GENOMICS AUTHOR 2 CONSORTIUM (SGC) REVDAT 3 31-JAN-24 7ORE 1 REMARK REVDAT 2 15-SEP-21 7ORE 1 JRNL REVDAT 1 21-JUL-21 7ORE 0 JRNL AUTH M.REYNDERS,A.CHAIKUAD,B.T.BERGER,K.BAUER,P.KOCH,S.LAUFER, JRNL AUTH 2 S.KNAPP,D.TRAUNER JRNL TITL CONTROLLING THE COVALENT REACTIVITY OF A KINASE INHIBITOR JRNL TITL 2 WITH LIGHT. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 60 20178 2021 JRNL REFN ESSN 1521-3773 JRNL PMID 34081840 JRNL DOI 10.1002/ANIE.202103767 REMARK 2 REMARK 2 RESOLUTION. 2.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 20663 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1096 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.18 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.24 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1482 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.3150 REMARK 3 BIN FREE R VALUE SET COUNT : 78 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2837 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 130 REMARK 3 SOLVENT ATOMS : 56 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.27000 REMARK 3 B22 (A**2) : -1.89000 REMARK 3 B33 (A**2) : -2.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.291 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.236 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.203 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.962 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3092 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2886 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4178 ; 1.274 ; 1.654 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6681 ; 1.085 ; 1.622 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 366 ;18.673 ; 5.410 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 149 ;34.506 ;22.617 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 517 ;16.293 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;19.513 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 378 ; 0.046 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4220 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 635 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 44 A 93 REMARK 3 ORIGIN FOR THE GROUP (A): 3.143 26.795 44.767 REMARK 3 T TENSOR REMARK 3 T11: 0.2218 T22: 0.0659 REMARK 3 T33: 0.0600 T12: 0.0393 REMARK 3 T13: -0.0220 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 6.4931 L22: 7.7350 REMARK 3 L33: 7.9912 L12: 1.2667 REMARK 3 L13: 0.0314 L23: 0.2779 REMARK 3 S TENSOR REMARK 3 S11: -0.0499 S12: 0.2167 S13: -0.1684 REMARK 3 S21: 0.0746 S22: 0.0984 S23: 0.5859 REMARK 3 S31: 0.1353 S32: -0.6065 S33: -0.0485 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 94 A 227 REMARK 3 ORIGIN FOR THE GROUP (A): 9.970 19.886 29.468 REMARK 3 T TENSOR REMARK 3 T11: 0.2128 T22: 0.0141 REMARK 3 T33: 0.0629 T12: -0.0110 REMARK 3 T13: -0.0238 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.6377 L22: 1.5189 REMARK 3 L33: 4.1710 L12: 0.4523 REMARK 3 L13: -0.9533 L23: -1.3852 REMARK 3 S TENSOR REMARK 3 S11: 0.0018 S12: -0.0067 S13: -0.1492 REMARK 3 S21: 0.0232 S22: -0.0422 S23: -0.0079 REMARK 3 S31: 0.1528 S32: -0.0019 S33: 0.0404 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 228 A 402 REMARK 3 ORIGIN FOR THE GROUP (A): 10.908 17.334 11.975 REMARK 3 T TENSOR REMARK 3 T11: 0.2760 T22: 0.0090 REMARK 3 T33: 0.0491 T12: 0.0094 REMARK 3 T13: 0.0168 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 1.0748 L22: 2.5633 REMARK 3 L33: 3.1812 L12: 0.7459 REMARK 3 L13: -1.1850 L23: -0.9334 REMARK 3 S TENSOR REMARK 3 S11: -0.0379 S12: 0.0696 S13: -0.1625 REMARK 3 S21: -0.3344 S22: 0.0294 S23: -0.0431 REMARK 3 S31: 0.2525 S32: 0.0144 S33: 0.0085 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 7ORE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1292116305. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21811 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.180 REMARK 200 RESOLUTION RANGE LOW (A) : 29.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.90300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4X21 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% MEDIUM-MOLECULAR WEIGHT PEG SMEARS REMARK 280 (MMW PEG SMEARS) AND 0.1 M HEPES, PH 7.8, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.43400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.72800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.52950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.72800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.43400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.52950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 38 REMARK 465 MET A 39 REMARK 465 SER A 40 REMARK 465 LYS A 41 REMARK 465 SER A 42 REMARK 465 LYS A 43 REMARK 465 PRO A 373 REMARK 465 GLN A 374 REMARK 465 ILE A 375 REMARK 465 TYR A 376 REMARK 465 ASP A 377 REMARK 465 LYS A 378 REMARK 465 GLN A 379 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 116 CG CD CE NZ REMARK 470 TYR A 223 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 70 -70.23 -99.73 REMARK 500 GLN A 140 -54.76 -130.68 REMARK 500 ARG A 188 -0.79 82.06 REMARK 500 ASP A 189 34.87 -145.97 REMARK 500 TYR A 223 108.07 -59.18 REMARK 500 LYS A 241 -165.24 -128.11 REMARK 500 PRO A 264 -178.76 -66.80 REMARK 500 ALA A 320 53.64 -163.68 REMARK 500 ASP A 321 -63.58 -92.81 REMARK 500 REMARK 500 REMARK: NULL DBREF 7ORE A 39 402 UNP P53779 MK10_HUMAN 39 402 SEQADV 7ORE SER A 38 UNP P53779 CLONING ARTIFACT SEQRES 1 A 365 SER MET SER LYS SER LYS VAL ASP ASN GLN PHE TYR SER SEQRES 2 A 365 VAL GLU VAL GLY ASP SER THR PHE THR VAL LEU LYS ARG SEQRES 3 A 365 TYR GLN ASN LEU LYS PRO ILE GLY SER GLY ALA GLN GLY SEQRES 4 A 365 ILE VAL CYS ALA ALA TYR ASP ALA VAL LEU ASP ARG ASN SEQRES 5 A 365 VAL ALA ILE LYS LYS LEU SER ARG PRO PHE GLN ASN GLN SEQRES 6 A 365 THR HIS ALA LYS ARG ALA TYR ARG GLU LEU VAL LEU MET SEQRES 7 A 365 LYS CYS VAL ASN HIS LYS ASN ILE ILE SER LEU LEU ASN SEQRES 8 A 365 VAL PHE THR PRO GLN LYS THR LEU GLU GLU PHE GLN ASP SEQRES 9 A 365 VAL TYR LEU VAL MET GLU LEU MET ASP ALA ASN LEU CYS SEQRES 10 A 365 GLN VAL ILE GLN MET GLU LEU ASP HIS GLU ARG MET SER SEQRES 11 A 365 TYR LEU LEU TYR GLN MET LEU CYS GLY ILE LYS HIS LEU SEQRES 12 A 365 HIS SER ALA GLY ILE ILE HIS ARG ASP LEU LYS PRO SER SEQRES 13 A 365 ASN ILE VAL VAL LYS SER ASP CYS THR LEU LYS ILE LEU SEQRES 14 A 365 ASP PHE GLY LEU ALA ARG THR ALA GLY THR SER PHE MET SEQRES 15 A 365 MET THR PRO TYR VAL VAL THR ARG TYR TYR ARG ALA PRO SEQRES 16 A 365 GLU VAL ILE LEU GLY MET GLY TYR LYS GLU ASN VAL ASP SEQRES 17 A 365 ILE TRP SER VAL GLY CYS ILE MET GLY GLU MET VAL ARG SEQRES 18 A 365 HIS LYS ILE LEU PHE PRO GLY ARG ASP TYR ILE ASP GLN SEQRES 19 A 365 TRP ASN LYS VAL ILE GLU GLN LEU GLY THR PRO CYS PRO SEQRES 20 A 365 GLU PHE MET LYS LYS LEU GLN PRO THR VAL ARG ASN TYR SEQRES 21 A 365 VAL GLU ASN ARG PRO LYS TYR ALA GLY LEU THR PHE PRO SEQRES 22 A 365 LYS LEU PHE PRO ASP SER LEU PHE PRO ALA ASP SER GLU SEQRES 23 A 365 HIS ASN LYS LEU LYS ALA SER GLN ALA ARG ASP LEU LEU SEQRES 24 A 365 SER LYS MET LEU VAL ILE ASP PRO ALA LYS ARG ILE SER SEQRES 25 A 365 VAL ASP ASP ALA LEU GLN HIS PRO TYR ILE ASN VAL TRP SEQRES 26 A 365 TYR ASP PRO ALA GLU VAL GLU ALA PRO PRO PRO GLN ILE SEQRES 27 A 365 TYR ASP LYS GLN LEU ASP GLU ARG GLU HIS THR ILE GLU SEQRES 28 A 365 GLU TRP LYS GLU LEU ILE TYR LYS GLU VAL MET ASN SER SEQRES 29 A 365 GLU HET 0EI A 501 47 HET 0EI A 502 94 HET EDO A 503 4 HET EDO A 504 4 HET EDO A 505 4 HET EDO A 506 4 HET EDO A 507 4 HET EDO A 508 4 HET EDO A 509 4 HET EDO A 510 4 HET EDO A 511 4 HETNAM 0EI 4-(DIMETHYLAMINO)-N-[(5Z)-9-[[4-[5-(4-FLUOROPHENYL)-3- HETNAM 2 0EI METHYL-2-METHYLSULFANYL-IMIDAZOL-4-YL]PYRIDIN-2- HETNAM 3 0EI YL]AMINO]-11,12-DIHYDROBENZO[C][1,2]BENZODIAZOCIN-2- HETNAM 4 0EI YL]BUTANAMIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 0EI 2(C36 H37 F N8 O S) FORMUL 4 EDO 9(C2 H6 O2) FORMUL 13 HOH *56(H2 O) HELIX 1 AA1 VAL A 44 ASN A 46 5 3 HELIX 2 AA2 ASN A 101 LYS A 116 1 16 HELIX 3 AA3 LEU A 153 GLN A 158 1 6 HELIX 4 AA4 ASP A 162 ALA A 183 1 22 HELIX 5 AA5 LYS A 191 SER A 193 5 3 HELIX 6 AA6 ALA A 231 LEU A 236 1 6 HELIX 7 AA7 ASN A 243 HIS A 259 1 17 HELIX 8 AA8 ASP A 267 GLY A 280 1 14 HELIX 9 AA9 CYS A 283 LYS A 288 1 6 HELIX 10 AB1 GLN A 291 GLU A 299 1 9 HELIX 11 AB2 THR A 308 PHE A 313 1 6 HELIX 12 AB3 PRO A 314 PHE A 318 5 5 HELIX 13 AB4 SER A 322 LEU A 340 1 19 HELIX 14 AB5 SER A 349 LEU A 354 1 6 HELIX 15 AB6 ILE A 359 TYR A 363 5 5 HELIX 16 AB7 ASP A 364 GLU A 369 1 6 HELIX 17 AB8 THR A 386 ASN A 400 1 15 SHEET 1 AA1 2 PHE A 48 VAL A 53 0 SHEET 2 AA1 2 SER A 56 LEU A 61 -1 O PHE A 58 N VAL A 51 SHEET 1 AA2 5 TYR A 64 SER A 72 0 SHEET 2 AA2 5 ILE A 77 ASP A 83 -1 O VAL A 78 N GLY A 71 SHEET 3 AA2 5 ARG A 88 SER A 96 -1 O LYS A 94 N ILE A 77 SHEET 4 AA2 5 ASP A 141 GLU A 147 -1 O MET A 146 N ALA A 91 SHEET 5 AA2 5 ASN A 128 PHE A 130 -1 N PHE A 130 O TYR A 143 SHEET 1 AA3 3 ALA A 151 ASN A 152 0 SHEET 2 AA3 3 ILE A 195 VAL A 197 -1 O VAL A 197 N ALA A 151 SHEET 3 AA3 3 LEU A 203 ILE A 205 -1 O LYS A 204 N VAL A 196 LINK SG ACYS A 154 C32A0EI A 501 1555 1555 1.84 CRYST1 52.868 71.059 107.456 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018915 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014073 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009306 0.00000