HEADER ISOMERASE 24-JUN-21 7OYL TITLE PHOSPHOGLUCOSE ISOMERASE OF ASPERGILLUS FUMIGATUS IN COMPLEXED WITH TITLE 2 GLUCOSE-6-PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE-6-PHOSPHATE ISOMERASE; COMPND 3 CHAIN: A; COMPND 4 EC: 5.3.1.9; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEOSARTORYA FUMIGATA; SOURCE 3 ORGANISM_COMMON: ASPERGILLUS FUMIGATUS; SOURCE 4 ORGANISM_TAXID: 746128; SOURCE 5 GENE: CDV57_05145; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX6P1 KEYWDS FUNGAL PATHOGEN, PHOSPHOGLUCOSE ISOMERASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR O.G.RAIMI,K.YAN,W.FANG,D.M.F.VAN AALTEN REVDAT 3 31-JAN-24 7OYL 1 REMARK REVDAT 2 26-JUL-23 7OYL 1 JRNL REVDAT 1 13-JUL-22 7OYL 0 JRNL AUTH Y.ZHOU,K.YAN,Q.QIN,O.G.RAIMI,C.DU,B.WANG,C.S.AHAMEFULE, JRNL AUTH 2 B.KOWALSKI,C.JIN,D.M.F.VAN AALTEN,W.FANG JRNL TITL PHOSPHOGLUCOSE ISOMERASE IS IMPORTANT FOR ASPERGILLUS JRNL TITL 2 FUMIGATUS CELL WALL BIOGENESIS. JRNL REF MBIO V. 13 42622 2022 JRNL REFN ESSN 2150-7511 JRNL PMID 35913157 JRNL DOI 10.1128/MBIO.01426-22 REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 78516 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4139 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5695 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.24 REMARK 3 BIN R VALUE (WORKING SET) : 0.3130 REMARK 3 BIN FREE R VALUE SET COUNT : 281 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4309 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 495 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.46000 REMARK 3 B22 (A**2) : 1.46000 REMARK 3 B33 (A**2) : -2.92000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.081 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.464 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4616 ; 0.012 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4213 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6295 ; 1.686 ; 1.643 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9820 ; 1.515 ; 1.571 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 608 ; 6.446 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 220 ;34.043 ;23.727 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 762 ;13.928 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;21.892 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 615 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5204 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 957 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7OYL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1292116627. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAY-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82761 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 48.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.29000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1GZD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA-HEPES PH 7.5, 1.4M TRI-SODIUM REMARK 280 CITRATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 116.25150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 42.62550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.62550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 174.37725 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.62550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 42.62550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 58.12575 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.62550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.62550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 174.37725 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 42.62550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.62550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 58.12575 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 116.25150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -153.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1137 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 25 CZ NH1 NH2 REMARK 470 GLU A 34 CD OE1 OE2 REMARK 470 LYS A 35 CD CE NZ REMARK 470 GLU A 41 CD OE1 OE2 REMARK 470 LYS A 91 CD CE NZ REMARK 470 GLU A 114 CD OE1 OE2 REMARK 470 LYS A 121 CE NZ REMARK 470 GLU A 132 CD OE1 OE2 REMARK 470 GLU A 136 CD OE1 OE2 REMARK 470 LYS A 177 NZ REMARK 470 GLU A 182 CD OE1 OE2 REMARK 470 LYS A 232 CE NZ REMARK 470 GLU A 236 OE1 OE2 REMARK 470 GLU A 256 CD OE1 OE2 REMARK 470 LYS A 260 CG CD CE NZ REMARK 470 LYS A 265 CD CE NZ REMARK 470 LYS A 266 CD CE NZ REMARK 470 GLU A 422 CD OE1 OE2 REMARK 470 LYS A 521 CE NZ REMARK 470 LYS A 548 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1073 O HOH A 1126 1.90 REMARK 500 O HOH A 1039 O HOH A 1071 1.94 REMARK 500 O HOH A 1080 O HOH A 1146 2.11 REMARK 500 OD1 ASN A 21 O HOH A 701 2.13 REMARK 500 O HOH A 999 O HOH A 1036 2.13 REMARK 500 O1 GOL A 605 O HOH A 703 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 708 O HOH A 708 7555 1.28 REMARK 500 O HOH A 1015 O HOH A 1174 6455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 5 -68.60 -107.47 REMARK 500 LEU A 23 -59.35 -147.57 REMARK 500 ASP A 166 -51.88 -135.04 REMARK 500 SER A 190 -50.43 -139.61 REMARK 500 LYS A 239 -46.05 62.99 REMARK 500 ASP A 347 113.49 -171.45 REMARK 500 THR A 380 -135.94 -111.63 REMARK 500 SER A 395 -62.27 -107.69 REMARK 500 GLN A 509 62.09 -158.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1196 DISTANCE = 8.09 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 608 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 300 OE1 REMARK 620 2 SER A 482 OG 137.8 REMARK 620 3 HOH A1116 O 84.9 124.9 REMARK 620 N 1 2 DBREF1 7OYL A 1 553 UNP A0A229XY52_ASPFM DBREF2 7OYL A A0A229XY52 1 553 SEQADV 7OYL GLY A -4 UNP A0A229XY5 EXPRESSION TAG SEQADV 7OYL PRO A -3 UNP A0A229XY5 EXPRESSION TAG SEQADV 7OYL LEU A -2 UNP A0A229XY5 EXPRESSION TAG SEQADV 7OYL GLY A -1 UNP A0A229XY5 CLONING ARTIFACT SEQADV 7OYL SER A 0 UNP A0A229XY5 CLONING ARTIFACT SEQRES 1 A 558 GLY PRO LEU GLY SER MET PRO GLY PHE SER GLN ALA THR SEQRES 2 A 558 GLU LEU GLY ALA TRP LYS GLU LEU GLN GLU HIS HIS ASN SEQRES 3 A 558 SER LEU GLY ARG ASN ILE VAL LEU LYS GLU TYR PHE GLU SEQRES 4 A 558 LYS ASP PRO GLN ARG PHE GLU LYS PHE SER ARG THR PHE SEQRES 5 A 558 ALA ASN PRO VAL ASP ASN THR GLU ILE LEU PHE ASP PHE SEQRES 6 A 558 SER LYS ASN PHE LEU THR GLU GLU THR LEU ALA LEU LEU SEQRES 7 A 558 VAL LYS LEU ALA ARG GLU ALA GLY VAL GLU GLU LEU ARG SEQRES 8 A 558 ASP ALA MET PHE LYS GLY ASP PRO ILE ASN PHE THR GLU SEQRES 9 A 558 ASP ARG ALA VAL TYR HIS VAL ALA LEU ARG ASN VAL THR SEQRES 10 A 558 ASN GLU PRO MET GLN VAL ASN GLY LYS SER VAL VAL GLU SEQRES 11 A 558 ASP VAL ASN SER VAL LEU GLU HIS MET LYS GLU PHE THR SEQRES 12 A 558 GLU GLN VAL ARG SER GLY GLU TRP LYS GLY TYR THR GLY SEQRES 13 A 558 LYS LYS ILE THR THR ILE ILE ASN ILE GLY ILE GLY GLY SEQRES 14 A 558 SER ASP LEU GLY PRO VAL MET VAL THR GLU ALA LEU LYS SEQRES 15 A 558 PRO TYR GLY ALA GLU ASP MET THR LEU HIS PHE VAL SER SEQRES 16 A 558 ASN ILE ASP GLY SER HIS ILE ALA GLU ALA LEU LYS HIS SEQRES 17 A 558 SER ASP PRO GLU THR THR LEU PHE LEU ILE ALA SER LYS SEQRES 18 A 558 THR PHE THR THR ALA GLU THR THR THR ASN ALA ASN SER SEQRES 19 A 558 ALA LYS LYS TRP PHE LEU GLU SER ALA LYS ASP GLU ALA SEQRES 20 A 558 HIS ILE ALA LYS HIS PHE VAL ALA LEU SER THR ASN GLU SEQRES 21 A 558 GLU GLU VAL THR LYS PHE GLY ILE ASP LYS LYS ASN MET SEQRES 22 A 558 PHE GLY PHE ALA SER TRP VAL GLY GLY ARG TYR SER VAL SEQRES 23 A 558 TRP SER ALA ILE GLY LEU SER VAL ALA LEU TYR ILE GLY SEQRES 24 A 558 PHE ASP ASN PHE HIS GLN PHE LEU ALA GLY ALA HIS ALA SEQRES 25 A 558 MET ASP LYS HIS PHE ARG GLU THR PRO LEU GLU GLN ASN SEQRES 26 A 558 ILE PRO VAL LEU GLY GLY LEU LEU SER VAL TRP TYR SER SEQRES 27 A 558 ASP PHE PHE GLY ALA GLN THR HIS LEU VAL ALA PRO PHE SEQRES 28 A 558 ASP GLN TYR LEU HIS ARG PHE PRO ALA TYR LEU GLN GLN SEQRES 29 A 558 LEU SER MET GLU SER ASN GLY LYS ALA ILE THR ARG THR SEQRES 30 A 558 GLY GLU TYR VAL LYS TYR THR THR GLY PRO ILE LEU PHE SEQRES 31 A 558 GLY GLU PRO ALA THR ASN ALA GLN HIS SER PHE PHE GLN SEQRES 32 A 558 LEU LEU HIS GLN GLY THR LYS LEU ILE PRO SER ASP PHE SEQRES 33 A 558 ILE MET ALA ALA GLU SER HIS ASN PRO VAL GLU GLY GLY SEQRES 34 A 558 LYS HIS GLN ARG MET LEU ALA SER ASN PHE LEU ALA GLN SEQRES 35 A 558 SER GLU ALA LEU MET VAL GLY LYS THR PRO GLU GLN VAL SEQRES 36 A 558 LYS THR GLU GLY ALA PRO ASP ASN LEU VAL PRO HIS LYS SEQRES 37 A 558 THR PHE LEU GLY ASN ARG PRO THR THR SER ILE LEU ALA SEQRES 38 A 558 GLN LYS ILE THR PRO SER THR LEU GLY ALA LEU ILE ALA SEQRES 39 A 558 TYR TYR GLU HIS LEU THR PHE THR GLU GLY ALA VAL TRP SEQRES 40 A 558 ASN ILE ASN SER PHE ASP GLN TRP GLY VAL GLU LEU GLY SEQRES 41 A 558 LYS VAL LEU ALA LYS LYS ILE GLN LYS GLU LEU GLU THR SEQRES 42 A 558 PRO GLY ALA GLY GLY ASP HIS ASP ALA SER THR SER GLY SEQRES 43 A 558 LEU LEU LEU ALA PHE LYS LYS LYS ALA ASN LEU ALA HET CL A 601 1 HET CL A 602 1 HET GOL A 603 6 HET GOL A 604 6 HET GOL A 605 6 HET GOL A 606 6 HET GOL A 607 6 HET NA A 608 1 HET BG6 A1201 16 HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETNAM BG6 6-O-PHOSPHONO-BETA-D-GLUCOPYRANOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN BG6 BETA-D-GLUCOSE-6-PHOSPHATE; 6-O-PHOSPHONO-BETA-D- HETSYN 2 BG6 GLUCOSE; 6-O-PHOSPHONO-D-GLUCOSE; 6-O-PHOSPHONO- HETSYN 3 BG6 GLUCOSE FORMUL 2 CL 2(CL 1-) FORMUL 4 GOL 5(C3 H8 O3) FORMUL 9 NA NA 1+ FORMUL 10 BG6 C6 H13 O9 P FORMUL 11 HOH *495(H2 O) HELIX 1 AA1 GLN A 6 GLU A 9 5 4 HELIX 2 AA2 LEU A 10 LEU A 23 1 14 HELIX 3 AA3 GLY A 24 ILE A 27 5 4 HELIX 4 AA4 VAL A 28 ASP A 36 1 9 HELIX 5 AA5 GLN A 38 PHE A 43 1 6 HELIX 6 AA6 THR A 66 ALA A 80 1 15 HELIX 7 AA7 GLY A 81 GLY A 92 1 12 HELIX 8 AA8 TYR A 104 ARG A 109 1 6 HELIX 9 AA9 VAL A 123 GLY A 144 1 22 HELIX 10 AB1 ILE A 162 SER A 165 5 4 HELIX 11 AB2 ASP A 166 LEU A 176 1 11 HELIX 12 AB3 LYS A 177 GLY A 180 5 4 HELIX 13 AB4 GLY A 194 HIS A 203 1 10 HELIX 14 AB5 THR A 220 LYS A 239 1 20 HELIX 15 AB6 ASP A 240 LYS A 246 5 7 HELIX 16 AB7 ASN A 254 GLY A 262 1 9 HELIX 17 AB8 ASP A 264 LYS A 266 5 3 HELIX 18 AB9 GLY A 276 SER A 280 5 5 HELIX 19 AC1 SER A 283 ILE A 285 5 3 HELIX 20 AC2 GLY A 286 GLY A 294 1 9 HELIX 21 AC3 GLY A 294 THR A 315 1 22 HELIX 22 AC4 PRO A 316 GLN A 319 5 4 HELIX 23 AC5 ASN A 320 PHE A 336 1 17 HELIX 24 AC6 ASP A 347 HIS A 351 5 5 HELIX 25 AC7 ARG A 352 GLY A 366 1 15 HELIX 26 AC8 THR A 390 HIS A 394 5 5 HELIX 27 AC9 PHE A 396 GLY A 403 1 8 HELIX 28 AD1 VAL A 421 GLY A 423 5 3 HELIX 29 AD2 GLY A 424 GLY A 444 1 21 HELIX 30 AD3 THR A 446 GLU A 453 1 8 HELIX 31 AD4 PRO A 456 ASN A 458 5 3 HELIX 32 AD5 LEU A 459 THR A 464 1 6 HELIX 33 AD6 THR A 480 ASN A 503 1 24 HELIX 34 AD7 GLN A 509 GLY A 511 5 3 HELIX 35 AD8 VAL A 512 GLU A 527 1 16 HELIX 36 AD9 ASP A 536 ASN A 551 1 16 SHEET 1 AA1 6 SER A 44 ASN A 49 0 SHEET 2 AA1 6 THR A 54 ASP A 59 -1 O PHE A 58 N ARG A 45 SHEET 3 AA1 6 THR A 471 ALA A 476 -1 O SER A 473 N ASP A 59 SHEET 4 AA1 6 SER A 409 ALA A 414 1 N PHE A 411 O THR A 472 SHEET 5 AA1 6 THR A 340 PRO A 345 1 N ALA A 344 O ASP A 410 SHEET 6 AA1 6 ILE A 383 PHE A 385 1 O PHE A 385 N VAL A 343 SHEET 1 AA2 2 GLN A 117 VAL A 118 0 SHEET 2 AA2 2 LYS A 121 SER A 122 -1 O LYS A 121 N VAL A 118 SHEET 1 AA3 5 THR A 185 VAL A 189 0 SHEET 2 AA3 5 THR A 156 ILE A 160 1 N ASN A 159 O VAL A 189 SHEET 3 AA3 5 THR A 209 ALA A 214 1 O LEU A 212 N ILE A 160 SHEET 4 AA3 5 PHE A 248 SER A 252 1 O LEU A 251 N ILE A 213 SHEET 5 AA3 5 MET A 268 GLY A 270 1 O PHE A 269 N ALA A 250 LINK OE1 GLN A 300 NA NA A 608 1555 1555 2.84 LINK OG SER A 482 NA NA A 608 1555 1555 2.84 LINK NA NA A 608 O HOH A1116 1555 1555 2.69 CISPEP 1 ALA A 389 THR A 390 0 11.51 CRYST1 85.251 85.251 232.503 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011730 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011730 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004301 0.00000