HEADER PROTEIN BINDING 07-JUL-21 7P3J TITLE EED IN COMPLEX WITH COMPOUND 4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYCOMB PROTEIN EED; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HEED,EMBRYONIC ECTODERM DEVELOPMENT PROTEIN,WD PROTEIN COMPND 5 ASSOCIATING WITH INTEGRIN CYTOPLASMIC TAILS 1,WAIT-1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EED; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METHYL TRANSFERASE EED PRC2 EPIGENETIC H3K27 WD40 INHIBITOR, PROTEIN KEYWDS 2 BINDING EXPDTA X-RAY DIFFRACTION AUTHOR J.A.READ REVDAT 3 31-JAN-24 7P3J 1 REMARK REVDAT 2 22-DEC-21 7P3J 1 JRNL REVDAT 1 08-DEC-21 7P3J 0 JRNL AUTH S.K.BAGAL,C.GREGSON,D.H.O' DONOVAN,K.G.PIKE,A.BLOECHER, JRNL AUTH 2 P.BARTON,A.BORODOVSKY,E.CODE,S.M.FILLERY,J.H.HSU, JRNL AUTH 3 S.P.KAWATKAR,C.LI,D.LONGMIRE,Y.NAI,S.C.NASH,A.PIKE, JRNL AUTH 4 J.ROBINSON,J.A.READ,P.B.RAWLINS,M.SHEN,J.TANG,P.WANG, JRNL AUTH 5 H.WOODS,B.WILLIAMSON JRNL TITL DIVERSE, POTENT, AND EFFICACIOUS INHIBITORS THAT TARGET THE JRNL TITL 2 EED SUBUNIT OF THE POLYCOMB REPRESSIVE COMPLEX 2 JRNL TITL 3 METHYLTRANSFERASE. JRNL REF J.MED.CHEM. V. 64 17146 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 34807608 JRNL DOI 10.1021/ACS.JMEDCHEM.1C01161 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.26 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 54720 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2736 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.98 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.00 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3418 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2920 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3248 REMARK 3 BIN R VALUE (WORKING SET) : 0.2920 REMARK 3 BIN FREE R VALUE : 0.2930 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.97 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 170 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5497 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 472 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.19 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 5.10390 REMARK 3 B22 (A**2) : 0.37860 REMARK 3 B33 (A**2) : -5.48250 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.230 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.165 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.134 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.157 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.131 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5739 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7808 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1936 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 134 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 838 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5739 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 742 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 6719 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.64 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.32 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|82 - A|439 } REMARK 3 ORIGIN FOR THE GROUP (A): 25.6907 33.7678 6.0175 REMARK 3 T TENSOR REMARK 3 T11: -0.0327 T22: -0.1177 REMARK 3 T33: -0.0570 T12: -0.0184 REMARK 3 T13: -0.0239 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.1238 L22: 0.9033 REMARK 3 L33: 0.8430 L12: -0.0946 REMARK 3 L13: -0.0522 L23: -0.0441 REMARK 3 S TENSOR REMARK 3 S11: -0.0196 S12: 0.0955 S13: 0.1297 REMARK 3 S21: -0.0769 S22: 0.0064 S23: 0.0533 REMARK 3 S31: 0.0228 S32: -0.0023 S33: 0.0132 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|81 - B|439 } REMARK 3 ORIGIN FOR THE GROUP (A): -23.7093 42.9904 16.8181 REMARK 3 T TENSOR REMARK 3 T11: -0.1004 T22: -0.1317 REMARK 3 T33: -0.1045 T12: -0.0542 REMARK 3 T13: 0.0084 T23: -0.0286 REMARK 3 L TENSOR REMARK 3 L11: 2.4640 L22: 1.1529 REMARK 3 L33: 1.9800 L12: 0.1170 REMARK 3 L13: 0.0883 L23: -0.2980 REMARK 3 S TENSOR REMARK 3 S11: -0.0033 S12: -0.1352 S13: -0.0173 REMARK 3 S21: 0.0902 S22: -0.0871 S23: -0.0549 REMARK 3 S31: -0.0754 S32: 0.3700 S33: 0.0904 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7P3J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-JUL-21. REMARK 100 THE DEPOSITION ID IS D_1292116905. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54814 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.930 REMARK 200 RESOLUTION RANGE LOW (A) : 48.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.5 REMARK 200 DATA REDUNDANCY IN SHELL : 11.40 REMARK 200 R MERGE FOR SHELL (I) : 1.50200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 6SFB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.1M PCTP PH7.7, 130MM REMARK 280 MGCL2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.05000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.64500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.64500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.05000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 76 REMARK 465 LYS A 77 REMARK 465 CYS A 78 REMARK 465 LYS A 79 REMARK 465 TYR A 80 REMARK 465 SER A 81 REMARK 465 VAL A 393 REMARK 465 GLU A 394 REMARK 465 ASP A 395 REMARK 465 PRO A 396 REMARK 465 HIS A 397 REMARK 465 LYS A 398 REMARK 465 ALA A 399 REMARK 465 LYS A 400 REMARK 465 LEU A 440 REMARK 465 ARG A 441 REMARK 465 LYS B 76 REMARK 465 LYS B 77 REMARK 465 CYS B 78 REMARK 465 LYS B 79 REMARK 465 TYR B 80 REMARK 465 TYR B 280 REMARK 465 ASN B 281 REMARK 465 PRO B 282 REMARK 465 ASN B 283 REMARK 465 LYS B 284 REMARK 465 THR B 285 REMARK 465 ASN B 286 REMARK 465 VAL B 393 REMARK 465 GLU B 394 REMARK 465 ASP B 395 REMARK 465 PRO B 396 REMARK 465 HIS B 397 REMARK 465 LYS B 398 REMARK 465 ALA B 399 REMARK 465 LYS B 400 REMARK 465 LEU B 440 REMARK 465 ARG B 441 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 83 NZ REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 GLU A 107 CG CD OE1 OE2 REMARK 470 ASP A 109 CG OD1 OD2 REMARK 470 SER A 128 OG REMARK 470 GLN A 129 CG CD OE1 NE2 REMARK 470 ASP A 144 CG OD1 OD2 REMARK 470 ASN A 157 CG OD1 ND2 REMARK 470 GLN A 181 CG CD OE1 NE2 REMARK 470 ARG A 201 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 233 CG CD OE1 OE2 REMARK 470 LYS A 268 CG CD CE NZ REMARK 470 LYS A 275 CD CE NZ REMARK 470 GLU A 276 CD OE1 OE2 REMARK 470 LYS A 342 CD CE NZ REMARK 470 GLU A 392 CG CD OE1 OE2 REMARK 470 LYS A 408 CD CE NZ REMARK 470 LYS B 83 CG CD CE NZ REMARK 470 LYS B 106 CG CD CE NZ REMARK 470 GLU B 107 CG CD OE1 OE2 REMARK 470 SER B 137 OG REMARK 470 HIS B 160 CG ND1 CD2 CE1 NE2 REMARK 470 GLN B 181 CG CD OE1 NE2 REMARK 470 LYS B 211 CD CE NZ REMARK 470 LYS B 268 CG CD CE NZ REMARK 470 LYS B 275 CG CD CE NZ REMARK 470 ARG B 306 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 335 CD CE NZ REMARK 470 LYS B 342 CD CE NZ REMARK 470 LYS B 344 CD CE NZ REMARK 470 LYS B 375 CG CD CE NZ REMARK 470 GLU B 392 CG CD OE1 OE2 REMARK 470 LYS B 408 CE NZ REMARK 470 ARG B 439 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 118 -133.87 51.33 REMARK 500 LEU A 135 -62.40 -93.26 REMARK 500 HIS A 213 1.41 83.39 REMARK 500 PHE A 299 148.46 -175.38 REMARK 500 SER A 323 -155.21 -119.31 REMARK 500 CYS A 361 54.91 -141.19 REMARK 500 TYR A 365 65.07 70.26 REMARK 500 SER B 118 -137.67 56.72 REMARK 500 LEU B 135 -62.67 -92.95 REMARK 500 VAL B 187 85.66 -68.12 REMARK 500 HIS B 213 5.17 80.92 REMARK 500 PHE B 299 146.51 -176.22 REMARK 500 SER B 323 -155.22 -119.96 REMARK 500 CYS B 361 55.13 -142.49 REMARK 500 TYR B 365 64.40 70.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 882 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH B 789 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH B 790 DISTANCE = 6.46 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 89 O REMARK 620 2 ASP A 91 OD1 105.3 REMARK 620 3 GLU A 337 OE2 14.6 117.9 REMARK 620 4 HOH A 761 O 16.6 120.7 3.0 REMARK 620 5 HOH A 837 O 15.5 117.6 1.9 4.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 501 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 341 OD2 REMARK 620 2 HOH A 690 O 86.1 REMARK 620 3 HOH A 716 O 97.5 157.0 REMARK 620 4 HOH A 777 O 85.7 81.2 76.4 REMARK 620 5 HOH A 804 O 94.5 124.3 78.3 154.5 REMARK 620 6 HOH A 839 O 88.1 67.0 135.7 148.0 57.4 REMARK 620 7 HOH A 870 O 175.6 89.9 85.7 92.0 89.2 91.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 350 O REMARK 620 2 HOH A 800 O 73.6 REMARK 620 3 HOH A 815 O 99.9 60.9 REMARK 620 4 HOH A 826 O 87.0 111.8 167.3 REMARK 620 5 HOH A 838 O 85.9 139.7 90.1 101.1 REMARK 620 N 1 2 3 4 DBREF 7P3J A 76 441 UNP O75530 EED_HUMAN 76 441 DBREF 7P3J B 76 441 UNP O75530 EED_HUMAN 76 441 SEQRES 1 A 366 LYS LYS CYS LYS TYR SER PHE LYS CYS VAL ASN SER LEU SEQRES 2 A 366 LYS GLU ASP HIS ASN GLN PRO LEU PHE GLY VAL GLN PHE SEQRES 3 A 366 ASN TRP HIS SER LYS GLU GLY ASP PRO LEU VAL PHE ALA SEQRES 4 A 366 THR VAL GLY SER ASN ARG VAL THR LEU TYR GLU CYS HIS SEQRES 5 A 366 SER GLN GLY GLU ILE ARG LEU LEU GLN SER TYR VAL ASP SEQRES 6 A 366 ALA ASP ALA ASP GLU ASN PHE TYR THR CYS ALA TRP THR SEQRES 7 A 366 TYR ASP SER ASN THR SER HIS PRO LEU LEU ALA VAL ALA SEQRES 8 A 366 GLY SER ARG GLY ILE ILE ARG ILE ILE ASN PRO ILE THR SEQRES 9 A 366 MET GLN CYS ILE LYS HIS TYR VAL GLY HIS GLY ASN ALA SEQRES 10 A 366 ILE ASN GLU LEU LYS PHE HIS PRO ARG ASP PRO ASN LEU SEQRES 11 A 366 LEU LEU SER VAL SER LYS ASP HIS ALA LEU ARG LEU TRP SEQRES 12 A 366 ASN ILE GLN THR ASP THR LEU VAL ALA ILE PHE GLY GLY SEQRES 13 A 366 VAL GLU GLY HIS ARG ASP GLU VAL LEU SER ALA ASP TYR SEQRES 14 A 366 ASP LEU LEU GLY GLU LYS ILE MET SER CYS GLY MET ASP SEQRES 15 A 366 HIS SER LEU LYS LEU TRP ARG ILE ASN SER LYS ARG MET SEQRES 16 A 366 MET ASN ALA ILE LYS GLU SER TYR ASP TYR ASN PRO ASN SEQRES 17 A 366 LYS THR ASN ARG PRO PHE ILE SER GLN LYS ILE HIS PHE SEQRES 18 A 366 PRO ASP PHE SER THR ARG ASP ILE HIS ARG ASN TYR VAL SEQRES 19 A 366 ASP CYS VAL ARG TRP LEU GLY ASP LEU ILE LEU SER LYS SEQRES 20 A 366 SER CYS GLU ASN ALA ILE VAL CYS TRP LYS PRO GLY LYS SEQRES 21 A 366 MET GLU ASP ASP ILE ASP LYS ILE LYS PRO SER GLU SER SEQRES 22 A 366 ASN VAL THR ILE LEU GLY ARG PHE ASP TYR SER GLN CYS SEQRES 23 A 366 ASP ILE TRP TYR MET ARG PHE SER MET ASP PHE TRP GLN SEQRES 24 A 366 LYS MET LEU ALA LEU GLY ASN GLN VAL GLY LYS LEU TYR SEQRES 25 A 366 VAL TRP ASP LEU GLU VAL GLU ASP PRO HIS LYS ALA LYS SEQRES 26 A 366 CYS THR THR LEU THR HIS HIS LYS CYS GLY ALA ALA ILE SEQRES 27 A 366 ARG GLN THR SER PHE SER ARG ASP SER SER ILE LEU ILE SEQRES 28 A 366 ALA VAL CYS ASP ASP ALA SER ILE TRP ARG TRP ASP ARG SEQRES 29 A 366 LEU ARG SEQRES 1 B 366 LYS LYS CYS LYS TYR SER PHE LYS CYS VAL ASN SER LEU SEQRES 2 B 366 LYS GLU ASP HIS ASN GLN PRO LEU PHE GLY VAL GLN PHE SEQRES 3 B 366 ASN TRP HIS SER LYS GLU GLY ASP PRO LEU VAL PHE ALA SEQRES 4 B 366 THR VAL GLY SER ASN ARG VAL THR LEU TYR GLU CYS HIS SEQRES 5 B 366 SER GLN GLY GLU ILE ARG LEU LEU GLN SER TYR VAL ASP SEQRES 6 B 366 ALA ASP ALA ASP GLU ASN PHE TYR THR CYS ALA TRP THR SEQRES 7 B 366 TYR ASP SER ASN THR SER HIS PRO LEU LEU ALA VAL ALA SEQRES 8 B 366 GLY SER ARG GLY ILE ILE ARG ILE ILE ASN PRO ILE THR SEQRES 9 B 366 MET GLN CYS ILE LYS HIS TYR VAL GLY HIS GLY ASN ALA SEQRES 10 B 366 ILE ASN GLU LEU LYS PHE HIS PRO ARG ASP PRO ASN LEU SEQRES 11 B 366 LEU LEU SER VAL SER LYS ASP HIS ALA LEU ARG LEU TRP SEQRES 12 B 366 ASN ILE GLN THR ASP THR LEU VAL ALA ILE PHE GLY GLY SEQRES 13 B 366 VAL GLU GLY HIS ARG ASP GLU VAL LEU SER ALA ASP TYR SEQRES 14 B 366 ASP LEU LEU GLY GLU LYS ILE MET SER CYS GLY MET ASP SEQRES 15 B 366 HIS SER LEU LYS LEU TRP ARG ILE ASN SER LYS ARG MET SEQRES 16 B 366 MET ASN ALA ILE LYS GLU SER TYR ASP TYR ASN PRO ASN SEQRES 17 B 366 LYS THR ASN ARG PRO PHE ILE SER GLN LYS ILE HIS PHE SEQRES 18 B 366 PRO ASP PHE SER THR ARG ASP ILE HIS ARG ASN TYR VAL SEQRES 19 B 366 ASP CYS VAL ARG TRP LEU GLY ASP LEU ILE LEU SER LYS SEQRES 20 B 366 SER CYS GLU ASN ALA ILE VAL CYS TRP LYS PRO GLY LYS SEQRES 21 B 366 MET GLU ASP ASP ILE ASP LYS ILE LYS PRO SER GLU SER SEQRES 22 B 366 ASN VAL THR ILE LEU GLY ARG PHE ASP TYR SER GLN CYS SEQRES 23 B 366 ASP ILE TRP TYR MET ARG PHE SER MET ASP PHE TRP GLN SEQRES 24 B 366 LYS MET LEU ALA LEU GLY ASN GLN VAL GLY LYS LEU TYR SEQRES 25 B 366 VAL TRP ASP LEU GLU VAL GLU ASP PRO HIS LYS ALA LYS SEQRES 26 B 366 CYS THR THR LEU THR HIS HIS LYS CYS GLY ALA ALA ILE SEQRES 27 B 366 ARG GLN THR SER PHE SER ARG ASP SER SER ILE LEU ILE SEQRES 28 B 366 ALA VAL CYS ASP ASP ALA SER ILE TRP ARG TRP ASP ARG SEQRES 29 B 366 LEU ARG HET MG A 501 1 HET MG A 502 1 HET MG A 503 1 HET L9W A 504 30 HET 54N B 501 34 HETNAM MG MAGNESIUM ION HETNAM L9W N-(2,3-DIHYDRO-1-BENZOFURAN-4-YLMETHYL)-8-(4- HETNAM 2 L9W METHYLSULFONYLPHENYL)-[1,2,4]TRIAZOLO[4,3-C]PYRIMIDIN- HETNAM 3 L9W 5-AMINE HETNAM 54N 8-[6-[(DIMETHYLAMINO)METHYL]-2-METHYL-PYRIDIN-3-YL]-5- HETNAM 2 54N [(5-FLUORANYL-2,3-DIHYDRO-1-BENZOFURAN-4-YL) HETNAM 3 54N METHYLAMINO]-2H-PYRIDO[3,4-D]PYRIDAZIN-1-ONE FORMUL 3 MG 3(MG 2+) FORMUL 6 L9W C21 H19 N5 O3 S FORMUL 7 54N C25 H25 F N6 O2 FORMUL 8 HOH *472(H2 O) HELIX 1 AA1 SER A 267 TYR A 280 1 14 HELIX 2 AA2 SER B 267 ASP B 279 1 13 SHEET 1 AA1 4 LYS A 83 LYS A 89 0 SHEET 2 AA1 4 SER A 433 ASP A 438 -1 O ASP A 438 N LYS A 83 SHEET 3 AA1 4 ILE A 424 CYS A 429 -1 N LEU A 425 O TRP A 437 SHEET 4 AA1 4 ILE A 413 PHE A 418 -1 N SER A 417 O ILE A 426 SHEET 1 AA2 4 LEU A 96 PHE A 101 0 SHEET 2 AA2 4 LEU A 111 GLY A 117 -1 O ALA A 114 N GLN A 100 SHEET 3 AA2 4 ARG A 120 CYS A 126 -1 O CYS A 126 N LEU A 111 SHEET 4 AA2 4 ILE A 132 VAL A 139 -1 O TYR A 138 N VAL A 121 SHEET 1 AA3 4 PHE A 147 TYR A 154 0 SHEET 2 AA3 4 PRO A 161 GLY A 167 -1 O ALA A 164 N ALA A 151 SHEET 3 AA3 4 ILE A 172 ASN A 176 -1 O ILE A 175 N LEU A 163 SHEET 4 AA3 4 GLN A 181 TYR A 186 -1 O LYS A 184 N ILE A 174 SHEET 1 AA4 5 ILE A 193 PHE A 198 0 SHEET 2 AA4 5 LEU A 205 SER A 210 -1 O LEU A 207 N LYS A 197 SHEET 3 AA4 5 LEU A 215 ASN A 219 -1 O TRP A 218 N LEU A 206 SHEET 4 AA4 5 THR A 224 PHE A 229 -1 O THR A 224 N ASN A 219 SHEET 5 AA4 5 GLN A 292 ILE A 294 1 O ILE A 294 N ILE A 228 SHEET 1 AA5 4 VAL A 239 TYR A 244 0 SHEET 2 AA5 4 LYS A 250 GLY A 255 -1 O MET A 252 N ASP A 243 SHEET 3 AA5 4 LEU A 260 ARG A 264 -1 O LYS A 261 N SER A 253 SHEET 4 AA5 4 PHE A 299 THR A 301 -1 O PHE A 299 N LEU A 262 SHEET 1 AA6 4 CYS A 311 LEU A 315 0 SHEET 2 AA6 4 LEU A 318 LYS A 322 -1 O LEU A 320 N ARG A 313 SHEET 3 AA6 4 ALA A 327 PRO A 333 -1 O VAL A 329 N SER A 321 SHEET 4 AA6 4 VAL A 350 ASP A 357 -1 O GLY A 354 N CYS A 330 SHEET 1 AA7 4 PHE A 368 MET A 370 0 SHEET 2 AA7 4 MET A 376 GLY A 380 -1 O ALA A 378 N SER A 369 SHEET 3 AA7 4 LEU A 386 ASP A 390 -1 O TYR A 387 N LEU A 379 SHEET 4 AA7 4 THR A 402 LEU A 404 -1 O LEU A 404 N LEU A 386 SHEET 1 AA8 4 LYS B 83 LYS B 89 0 SHEET 2 AA8 4 SER B 433 ASP B 438 -1 O ARG B 436 N ASN B 86 SHEET 3 AA8 4 ILE B 424 CYS B 429 -1 N LEU B 425 O TRP B 437 SHEET 4 AA8 4 ILE B 413 PHE B 418 -1 N SER B 417 O ILE B 426 SHEET 1 AA9 4 GLY B 98 PHE B 101 0 SHEET 2 AA9 4 LEU B 111 GLY B 117 -1 O ALA B 114 N GLN B 100 SHEET 3 AA9 4 ARG B 120 CYS B 126 -1 O CYS B 126 N LEU B 111 SHEET 4 AA9 4 ILE B 132 VAL B 139 -1 O TYR B 138 N VAL B 121 SHEET 1 AB1 4 PHE B 147 TYR B 154 0 SHEET 2 AB1 4 PRO B 161 GLY B 167 -1 O ALA B 164 N ALA B 151 SHEET 3 AB1 4 ILE B 171 ASN B 176 -1 O ILE B 175 N LEU B 163 SHEET 4 AB1 4 GLN B 181 VAL B 187 -1 O LYS B 184 N ILE B 174 SHEET 1 AB2 5 ILE B 193 HIS B 199 0 SHEET 2 AB2 5 ASP B 202 SER B 210 -1 O LEU B 207 N LYS B 197 SHEET 3 AB2 5 LEU B 215 ASN B 219 -1 O TRP B 218 N LEU B 206 SHEET 4 AB2 5 THR B 224 PHE B 229 -1 O THR B 224 N ASN B 219 SHEET 5 AB2 5 GLN B 292 ILE B 294 1 O ILE B 294 N ILE B 228 SHEET 1 AB3 4 VAL B 239 TYR B 244 0 SHEET 2 AB3 4 LYS B 250 GLY B 255 -1 O MET B 252 N ASP B 243 SHEET 3 AB3 4 LEU B 260 ARG B 264 -1 O TRP B 263 N ILE B 251 SHEET 4 AB3 4 PHE B 299 THR B 301 -1 O PHE B 299 N LEU B 262 SHEET 1 AB4 4 CYS B 311 LEU B 315 0 SHEET 2 AB4 4 LEU B 318 LYS B 322 -1 O LEU B 318 N LEU B 315 SHEET 3 AB4 4 ALA B 327 PRO B 333 -1 O VAL B 329 N SER B 321 SHEET 4 AB4 4 VAL B 350 ASP B 357 -1 O LEU B 353 N CYS B 330 SHEET 1 AB5 4 PHE B 368 MET B 370 0 SHEET 2 AB5 4 MET B 376 GLY B 380 -1 O ALA B 378 N SER B 369 SHEET 3 AB5 4 LEU B 386 ASP B 390 -1 O TYR B 387 N LEU B 379 SHEET 4 AB5 4 THR B 402 LEU B 404 -1 O LEU B 404 N LEU B 386 LINK O LYS A 89 MG MG A 502 1555 2564 2.29 LINK OD1 ASP A 91 MG MG A 502 1555 2564 2.47 LINK OE2 GLU A 337 MG MG A 502 1555 1555 2.56 LINK OD2 ASP A 341 MG MG A 501 1555 1555 2.06 LINK O VAL A 350 MG MG A 503 1555 1555 2.30 LINK MG MG A 501 O HOH A 690 1555 1555 2.60 LINK MG MG A 501 O HOH A 716 1555 1555 2.42 LINK MG MG A 501 O HOH A 777 1555 1555 2.58 LINK MG MG A 501 O HOH A 804 1555 1555 2.91 LINK MG MG A 501 O HOH A 839 1555 1555 2.76 LINK MG MG A 501 O HOH A 870 1555 1555 2.23 LINK MG MG A 502 O HOH A 761 1555 2565 2.29 LINK MG MG A 502 O HOH A 837 1555 1555 2.75 LINK MG MG A 503 O HOH A 800 1555 1555 2.83 LINK MG MG A 503 O HOH A 815 1555 2565 2.53 LINK MG MG A 503 O HOH A 826 1555 1555 2.68 LINK MG MG A 503 O HOH A 838 1555 1555 2.66 CRYST1 86.100 86.600 97.290 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011614 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011547 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010279 0.00000