HEADER PEPTIDE BINDING PROTEIN 03-AUG-21 7PC5 TITLE THE THIRD PDZ DOMAIN OF PDZD7 COMPLEXED WITH THE PDZ-BINDING MOTIF OF TITLE 2 EXOC4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PDZ DOMAIN-CONTAINING PROTEIN 7,ANNEXIN A2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ANNEXIN II,ANNEXIN-2,CALPACTIN I HEAVY CHAIN,CALPACTIN-1 COMPND 5 HEAVY CHAIN,CHROMOBINDIN-8,LIPOCORTIN II,PLACENTAL ANTICOAGULANT COMPND 6 PROTEIN IV,PAP-IV,PROTEIN I,P36; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: EXOCYST COMPLEX COMPONENT 4; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: EXOCYST COMPLEX COMPONENT SEC8; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: N-TERMINAL BIOTIN-ADO-ADO (AMINO-DODECANOIC ACID) COMPND 14 LABEL SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PDZD7, PDZK7, ANXA2, ANX2, ANX2L4, CAL1H, LPC2D; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS PDZ, COMPLEX, CRYSTALLIZATION CHAPERONE, PEPTIDE BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.COUSIDO-SIAH,G.TRAVE,G.GOGL REVDAT 2 31-JAN-24 7PC5 1 REMARK REVDAT 1 20-APR-22 7PC5 0 JRNL AUTH A.COUSIDO-SIAH,L.CARNEIRO,C.KOSTMANN,P.ECSEDI,L.NYITRAY, JRNL AUTH 2 G.TRAVE,G.GOGL JRNL TITL A SCALABLE STRATEGY TO SOLVE STRUCTURES OF PDZ DOMAINS AND JRNL TITL 2 THEIR COMPLEXES. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 78 509 2022 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 35362473 JRNL DOI 10.1107/S2059798322001784 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.75 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 64885 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3246 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.7480 - 4.8320 0.99 2965 157 0.1855 0.1949 REMARK 3 2 4.8320 - 3.8361 0.99 2808 148 0.1404 0.1442 REMARK 3 3 3.8361 - 3.3514 0.99 2770 145 0.1537 0.1716 REMARK 3 4 3.3514 - 3.0451 0.99 2752 145 0.1511 0.1994 REMARK 3 5 3.0451 - 2.8269 0.98 2730 143 0.1613 0.1855 REMARK 3 6 2.8269 - 2.6602 0.99 2730 144 0.1665 0.1785 REMARK 3 7 2.6602 - 2.5270 0.99 2678 141 0.1640 0.1879 REMARK 3 8 2.5270 - 2.4170 0.98 2705 143 0.1612 0.1959 REMARK 3 9 2.4170 - 2.3240 0.98 2681 141 0.1547 0.1934 REMARK 3 10 2.3240 - 2.2438 0.98 2656 139 0.1554 0.1755 REMARK 3 11 2.2438 - 2.1736 0.97 2651 140 0.1519 0.1879 REMARK 3 12 2.1736 - 2.1115 0.97 2678 141 0.1615 0.1973 REMARK 3 13 2.1115 - 2.0559 0.98 2671 141 0.1680 0.2035 REMARK 3 14 2.0559 - 2.0058 0.98 2607 137 0.1679 0.1988 REMARK 3 15 2.0058 - 1.9602 0.97 2653 140 0.1823 0.1851 REMARK 3 16 1.9602 - 1.9185 0.97 2638 139 0.1878 0.2201 REMARK 3 17 1.9185 - 1.8801 0.97 2620 138 0.1977 0.2012 REMARK 3 18 1.8801 - 1.8446 0.97 2614 137 0.1995 0.1995 REMARK 3 19 1.8446 - 1.8117 0.96 2627 139 0.2121 0.2510 REMARK 3 20 1.8117 - 1.7809 0.97 2633 138 0.2140 0.3080 REMARK 3 21 1.7809 - 1.7522 0.96 2592 137 0.2389 0.2439 REMARK 3 22 1.7522 - 1.7253 0.97 2599 137 0.2461 0.2600 REMARK 3 23 1.7253 - 1.7000 0.95 2581 136 0.2555 0.2791 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 1.00 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.780 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 859 THROUGH 964 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8532 -16.6584 11.4362 REMARK 3 T TENSOR REMARK 3 T11: 0.9050 T22: 0.6930 REMARK 3 T33: 1.0281 T12: -0.1617 REMARK 3 T13: 0.1054 T23: -0.3263 REMARK 3 L TENSOR REMARK 3 L11: 1.8166 L22: 3.4685 REMARK 3 L33: 2.8466 L12: 2.2930 REMARK 3 L13: 1.8707 L23: 1.8454 REMARK 3 S TENSOR REMARK 3 S11: -0.2912 S12: 0.5224 S13: -1.2634 REMARK 3 S21: -0.4037 S22: -0.2978 S23: 0.7484 REMARK 3 S31: 1.2051 S32: -0.7469 S33: 0.5536 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 965 THROUGH 1272 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3445 0.9539 34.3464 REMARK 3 T TENSOR REMARK 3 T11: 0.1345 T22: 0.1566 REMARK 3 T33: 0.1815 T12: -0.0194 REMARK 3 T13: 0.0295 T23: -0.0269 REMARK 3 L TENSOR REMARK 3 L11: 0.6019 L22: 0.7909 REMARK 3 L33: 1.7751 L12: 0.0484 REMARK 3 L13: -0.0919 L23: -0.5705 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: 0.0228 S13: -0.0395 REMARK 3 S21: 0.0222 S22: -0.0389 S23: -0.0240 REMARK 3 S31: -0.1078 S32: 0.1870 S33: 0.0292 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.2031 -12.9325 1.6715 REMARK 3 T TENSOR REMARK 3 T11: 0.9406 T22: 1.4349 REMARK 3 T33: 1.0584 T12: -0.0490 REMARK 3 T13: -0.2060 T23: -0.6112 REMARK 3 L TENSOR REMARK 3 L11: 5.7379 L22: 4.8373 REMARK 3 L33: 3.3006 L12: -0.6108 REMARK 3 L13: -0.4423 L23: -3.9010 REMARK 3 S TENSOR REMARK 3 S11: -0.5402 S12: 0.5487 S13: 0.1013 REMARK 3 S21: -0.4219 S22: -0.7312 S23: 1.2313 REMARK 3 S31: 1.3074 S32: -1.9929 S33: 1.2611 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7PC5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1292117390. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64942 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 42.748 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 13.64 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.6400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.830 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5N7D, 3LNY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM SULFATE, 15% PEG 4000, REMARK 280 0.1M TRIS PH8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.17500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 90.84000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.17500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 90.84000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 853 REMARK 465 SER A 854 REMARK 465 HIS A 855 REMARK 465 MET A 856 REMARK 465 GLY A 857 REMARK 465 GLY A 858 REMARK 465 GLY A 951 REMARK 465 PRO A 952 REMARK 465 SER A 953 REMARK 465 GLY A 954 REMARK 465 SER A 955 REMARK 465 ALA A 956 REMARK 465 TYR A 957 REMARK 465 GLY A 958 REMARK 465 SER A 959 REMARK 465 ALA B 27 REMARK 465 THR B 28 REMARK 465 LYS B 29 REMARK 465 ASP B 30 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 984 124.68 70.11 REMARK 500 ASN A1198 94.02 -164.03 REMARK 500 ASP A1232 35.16 -147.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1902 DISTANCE = 5.83 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 983 O REMARK 620 2 VAL A 984 O 68.7 REMARK 620 3 GLU A 986 OE1 122.3 69.5 REMARK 620 4 GLU A 986 OE2 83.7 79.0 50.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A1021 O REMARK 620 2 LEU A1024 O 82.1 REMARK 620 3 GLU A1029 OE1 100.5 72.7 REMARK 620 4 HOH A1698 O 88.3 76.8 146.6 REMARK 620 5 HOH A1733 O 178.1 99.8 79.7 92.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A1051 O REMARK 620 2 GLY A1053 O 102.8 REMARK 620 3 GLY A1055 O 107.9 83.0 REMARK 620 4 ASP A1095 OD1 85.0 150.9 121.7 REMARK 620 5 HOH A1442 O 164.5 76.5 87.4 88.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A1135 O REMARK 620 2 ARG A1138 O 80.8 REMARK 620 3 GLY A1140 O 95.9 82.8 REMARK 620 4 GLU A1180 OE1 82.5 155.8 81.7 REMARK 620 5 GLU A1180 OE2 81.9 141.4 133.2 51.6 REMARK 620 6 HOH A1662 O 106.3 81.9 150.5 119.7 70.4 REMARK 620 7 HOH A1747 O 169.7 108.9 88.9 89.3 88.2 72.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A1167 OG REMARK 620 2 MET A1211 O 76.2 REMARK 620 3 GLY A1213 O 75.6 3.9 REMARK 620 4 GLY A1215 O 72.7 3.6 4.0 REMARK 620 5 ASP A1255 OD1 77.5 2.6 6.4 5.8 REMARK 620 6 ASP A1255 OD2 74.6 2.9 6.4 4.0 3.0 REMARK 620 7 HOH A1657 O 76.3 1.0 3.0 3.5 3.4 3.8 REMARK 620 N 1 2 3 4 5 6 DBREF 7PC5 A 858 953 UNP Q9H5P4 PDZD7_HUMAN 858 953 DBREF 7PC5 A 955 1272 UNP P07355 ANXA2_HUMAN 22 339 DBREF 7PC5 B 27 36 UNP Q96A65 EXOC4_HUMAN 965 974 SEQADV 7PC5 GLY A 853 UNP Q9H5P4 EXPRESSION TAG SEQADV 7PC5 SER A 854 UNP Q9H5P4 EXPRESSION TAG SEQADV 7PC5 HIS A 855 UNP Q9H5P4 EXPRESSION TAG SEQADV 7PC5 MET A 856 UNP Q9H5P4 EXPRESSION TAG SEQADV 7PC5 GLY A 857 UNP Q9H5P4 EXPRESSION TAG SEQADV 7PC5 GLY A 954 UNP Q9H5P4 LINKER SEQADV 7PC5 GLU A 999 UNP P07355 ALA 66 CONFLICT SEQRES 1 A 420 GLY SER HIS MET GLY GLY GLU LEU LYS THR VAL THR LEU SEQRES 2 A 420 SER LYS MET LYS GLN SER LEU GLY ILE SER ILE SER GLY SEQRES 3 A 420 GLY ILE GLU SER LYS VAL GLN PRO MET VAL LYS ILE GLU SEQRES 4 A 420 LYS ILE PHE PRO GLY GLY ALA ALA PHE LEU SER GLY ALA SEQRES 5 A 420 LEU GLN ALA GLY PHE GLU LEU VAL ALA VAL ASP GLY GLU SEQRES 6 A 420 ASN LEU GLU GLN VAL THR HIS GLN ARG ALA VAL ASP THR SEQRES 7 A 420 ILE ARG ARG ALA TYR ARG ASN LYS ALA ARG GLU PRO MET SEQRES 8 A 420 GLU LEU VAL VAL ARG VAL PRO GLY PRO SER GLY SER ALA SEQRES 9 A 420 TYR GLY SER VAL LYS ALA TYR THR ASN PHE ASP ALA GLU SEQRES 10 A 420 ARG ASP ALA LEU ASN ILE GLU THR ALA ILE LYS THR LYS SEQRES 11 A 420 GLY VAL ASP GLU VAL THR ILE VAL ASN ILE LEU THR ASN SEQRES 12 A 420 ARG SER ASN GLU GLN ARG GLN ASP ILE ALA PHE ALA TYR SEQRES 13 A 420 GLN ARG ARG THR LYS LYS GLU LEU ALA SER ALA LEU LYS SEQRES 14 A 420 SER ALA LEU SER GLY HIS LEU GLU THR VAL ILE LEU GLY SEQRES 15 A 420 LEU LEU LYS THR PRO ALA GLN TYR ASP ALA SER GLU LEU SEQRES 16 A 420 LYS ALA SER MET LYS GLY LEU GLY THR ASP GLU ASP SER SEQRES 17 A 420 LEU ILE GLU ILE ILE CYS SER ARG THR ASN GLN GLU LEU SEQRES 18 A 420 GLN GLU ILE ASN ARG VAL TYR LYS GLU MET TYR LYS THR SEQRES 19 A 420 ASP LEU GLU LYS ASP ILE ILE SER ASP THR SER GLY ASP SEQRES 20 A 420 PHE ARG LYS LEU MET VAL ALA LEU ALA LYS GLY ARG ARG SEQRES 21 A 420 ALA GLU ASP GLY SER VAL ILE ASP TYR GLU LEU ILE ASP SEQRES 22 A 420 GLN ASP ALA ARG ASP LEU TYR ASP ALA GLY VAL LYS ARG SEQRES 23 A 420 LYS GLY THR ASP VAL PRO LYS TRP ILE SER ILE MET THR SEQRES 24 A 420 GLU ARG SER VAL PRO HIS LEU GLN LYS VAL PHE ASP ARG SEQRES 25 A 420 TYR LYS SER TYR SER PRO TYR ASP MET LEU GLU SER ILE SEQRES 26 A 420 ARG LYS GLU VAL LYS GLY ASP LEU GLU ASN ALA PHE LEU SEQRES 27 A 420 ASN LEU VAL GLN CYS ILE GLN ASN LYS PRO LEU TYR PHE SEQRES 28 A 420 ALA ASP ARG LEU TYR ASP SER MET LYS GLY LYS GLY THR SEQRES 29 A 420 ARG ASP LYS VAL LEU ILE ARG ILE MET VAL SER ARG SER SEQRES 30 A 420 GLU VAL ASP MET LEU LYS ILE ARG SER GLU PHE LYS ARG SEQRES 31 A 420 LYS TYR GLY LYS SER LEU TYR TYR TYR ILE GLN GLN ASP SEQRES 32 A 420 THR LYS GLY ASP TYR GLN LYS ALA LEU LEU TYR LEU CYS SEQRES 33 A 420 GLY GLY ASP ASP SEQRES 1 B 10 ALA THR LYS ASP LYS LYS ILE THR THR VAL HET CA A1301 1 HET CA A1302 1 HET CA A1303 1 HET CA A1304 1 HET CA A1305 1 HET GOL A1306 6 HET GOL A1307 6 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CA 5(CA 2+) FORMUL 8 GOL 2(C3 H8 O3) FORMUL 10 HOH *504(H2 O) HELIX 1 AA1 GLY A 897 GLY A 903 1 7 HELIX 2 AA2 THR A 923 ASN A 937 1 15 HELIX 3 AA3 THR A 964 THR A 981 1 18 HELIX 4 AA4 ASP A 985 THR A 994 1 10 HELIX 5 AA5 SER A 997 LYS A 1013 1 17 HELIX 6 AA6 GLU A 1015 LEU A 1024 1 10 HELIX 7 AA7 SER A 1025 LYS A 1037 1 13 HELIX 8 AA8 THR A 1038 MET A 1051 1 14 HELIX 9 AA9 ASP A 1057 ARG A 1068 1 12 HELIX 10 AB1 THR A 1069 LYS A 1085 1 17 HELIX 11 AB2 ASP A 1087 THR A 1096 1 10 HELIX 12 AB3 SER A 1097 LYS A 1109 1 13 HELIX 13 AB4 ASP A 1120 GLY A 1135 1 16 HELIX 14 AB5 ASP A 1142 ARG A 1153 1 12 HELIX 15 AB6 SER A 1154 SER A 1169 1 16 HELIX 16 AB7 ASP A 1172 VAL A 1181 1 10 HELIX 17 AB8 LYS A 1182 ASN A 1198 1 17 HELIX 18 AB9 ASN A 1198 LYS A 1212 1 15 HELIX 19 AC1 ARG A 1217 SER A 1229 1 13 HELIX 20 AC2 ASP A 1232 GLY A 1245 1 14 HELIX 21 AC3 SER A 1247 THR A 1256 1 10 HELIX 22 AC4 LYS A 1257 GLY A 1269 1 13 SHEET 1 AA1 4 LEU A 860 LEU A 865 0 SHEET 2 AA1 4 MET A 943 ARG A 948 -1 O LEU A 945 N VAL A 863 SHEET 3 AA1 4 GLU A 910 VAL A 914 -1 N GLU A 910 O ARG A 948 SHEET 4 AA1 4 GLU A 917 ASN A 918 -1 O GLU A 917 N VAL A 914 SHEET 1 AA2 3 LYS A 889 ILE A 893 0 SHEET 2 AA2 3 ILE A 874 SER A 877 -1 N SER A 875 O GLU A 891 SHEET 3 AA2 3 ILE B 33 THR B 35 -1 O THR B 34 N ILE A 876 LINK O GLY A 983 CA CA A1301 1555 1555 2.58 LINK O VAL A 984 CA CA A1301 1555 1555 2.55 LINK OE1 GLU A 986 CA CA A1301 1555 1555 2.39 LINK OE2 GLU A 986 CA CA A1301 1555 1555 2.75 LINK O LYS A1021 CA CA A1302 1555 1555 2.46 LINK O LEU A1024 CA CA A1302 1555 1555 2.67 LINK OE1 GLU A1029 CA CA A1302 1555 1555 2.68 LINK O MET A1051 CA CA A1303 1555 1555 2.61 LINK O GLY A1053 CA CA A1303 1555 1555 2.73 LINK O GLY A1055 CA CA A1303 1555 1555 2.69 LINK OD1 ASP A1095 CA CA A1303 1555 1555 2.72 LINK O GLY A1135 CA CA A1304 1555 1555 2.34 LINK O ARG A1138 CA CA A1304 1555 1555 2.29 LINK O GLY A1140 CA CA A1304 1555 1555 2.26 LINK OG SER A1167 CA CA A1305 1555 3545 2.37 LINK OE1 GLU A1180 CA CA A1304 1555 1555 2.39 LINK OE2 GLU A1180 CA CA A1304 1555 1555 2.64 LINK O MET A1211 CA CA A1305 1555 1555 2.37 LINK O GLY A1213 CA CA A1305 1555 1555 2.37 LINK O GLY A1215 CA CA A1305 1555 1555 2.37 LINK OD1 ASP A1255 CA CA A1305 1555 1555 2.47 LINK OD2 ASP A1255 CA CA A1305 1555 1555 2.48 LINK CA CA A1302 O HOH A1698 1555 1555 2.19 LINK CA CA A1302 O HOH A1733 1555 1555 2.18 LINK CA CA A1303 O HOH A1442 1555 1555 2.95 LINK CA CA A1304 O HOH A1662 1555 1555 2.47 LINK CA CA A1304 O HOH A1747 1555 1555 2.49 LINK CA CA A1305 O HOH A1657 1555 3555 2.33 CISPEP 1 GLU A 941 PRO A 942 0 2.93 CRYST1 54.110 60.350 181.680 90.00 90.00 90.00 P 2 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018481 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016570 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005504 0.00000