HEADER LYASE 03-AUG-21 7PCC TITLE BURG IN COMPLEX WITH MG2+ AND NAD+ (HOLO): BIOSYNTHESIS OF TITLE 2 CYCLOPROPANOL RINGS IN BACTERIAL TOXINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: KETOL-ACID REDUCTOISOMERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.1.1.86; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA THAILANDENSIS (STRAIN ATCC 700388 SOURCE 3 / DSM 13276 / CIP 106301 / E264); SOURCE 4 ORGANISM_TAXID: 271848; SOURCE 5 STRAIN: ATCC 700388 / DSM 13276 / CIP 106301 / E264; SOURCE 6 GENE: ILVC-2, BTH_II2094; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PATHOGENS, NATURAL PRODUCTS, TOXINS, BIOSYNTHESIS, CATALYSIS, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR F.TROTTMANN,K.ISHIDA,M.ISHIDA,H.KRIES,M.GROLL,C.HERTWECK REVDAT 3 31-JAN-24 7PCC 1 REMARK REVDAT 2 17-AUG-22 7PCC 1 JRNL REVDAT 1 10-AUG-22 7PCC 0 JRNL AUTH F.TROTTMANN,K.ISHIDA,M.ISHIDA-ITO,H.KRIES,M.GROLL,C.HERTWECK JRNL TITL PATHOGENIC BACTERIA REMODEL CENTRAL METABOLIC ENZYME TO JRNL TITL 2 BUILD A CYCLOPROPANOL WARHEAD. JRNL REF NAT.CHEM. V. 14 884 2022 JRNL REFN ESSN 1755-4349 JRNL PMID 35906404 JRNL DOI 10.1038/S41557-022-01005-Z REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 51548 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2713 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3753 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.47 REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE SET COUNT : 197 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5221 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 104 REMARK 3 SOLVENT ATOMS : 249 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.40000 REMARK 3 B22 (A**2) : -3.31000 REMARK 3 B33 (A**2) : 4.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.717 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.114 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.035 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5428 ; 0.003 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5024 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7379 ; 1.204 ; 1.641 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11526 ; 1.198 ; 1.576 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 681 ; 6.180 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 325 ;28.442 ;20.400 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 816 ;13.408 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 60 ;17.414 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 683 ; 0.050 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6288 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1246 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 10452 ; 0.622 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 803 REMARK 3 ORIGIN FOR THE GROUP (A): 60.8423 64.9566 66.3335 REMARK 3 T TENSOR REMARK 3 T11: 0.0102 T22: 0.0160 REMARK 3 T33: 0.0017 T12: 0.0009 REMARK 3 T13: -0.0001 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.0338 L22: 0.0299 REMARK 3 L33: 0.0095 L12: 0.0124 REMARK 3 L13: 0.0042 L23: 0.0160 REMARK 3 S TENSOR REMARK 3 S11: 0.0008 S12: 0.0003 S13: 0.0069 REMARK 3 S21: 0.0002 S22: -0.0002 S23: -0.0004 REMARK 3 S31: 0.0026 S32: -0.0008 S33: -0.0007 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 803 REMARK 3 ORIGIN FOR THE GROUP (A): 52.3810 35.8024 66.1081 REMARK 3 T TENSOR REMARK 3 T11: 0.0107 T22: 0.0170 REMARK 3 T33: 0.0011 T12: 0.0006 REMARK 3 T13: -0.0000 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.0312 L22: 0.0376 REMARK 3 L33: 0.0093 L12: 0.0138 REMARK 3 L13: -0.0083 L23: -0.0170 REMARK 3 S TENSOR REMARK 3 S11: -0.0001 S12: 0.0026 S13: -0.0048 REMARK 3 S21: 0.0008 S22: 0.0002 S23: -0.0005 REMARK 3 S31: -0.0004 S32: -0.0009 S33: -0.0001 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7PCC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1292117464. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-AUG-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54278 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.57000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4TSK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE; 20% PEG 8K, 1 MM NAD+, 5 REMARK 280 MM MGCL2, PH 9.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.74500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.43500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.37000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.43500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.74500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.37000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -155.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 342 REMARK 465 ALA A 343 REMARK 465 PRO A 344 REMARK 465 ALA A 345 REMARK 465 ASP A 346 REMARK 465 VAL A 347 REMARK 465 GLU A 348 REMARK 465 PRO A 349 REMARK 465 GLU A 350 REMARK 465 ALA A 351 REMARK 465 ALA A 352 REMARK 465 ARG A 353 REMARK 465 MET B 1 REMARK 465 ALA B 345 REMARK 465 ASP B 346 REMARK 465 VAL B 347 REMARK 465 GLU B 348 REMARK 465 PRO B 349 REMARK 465 GLU B 350 REMARK 465 ALA B 351 REMARK 465 ALA B 352 REMARK 465 ARG B 353 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 26 39.53 -141.27 REMARK 500 LEU A 80 58.45 -110.55 REMARK 500 ILE A 94 -63.61 -96.06 REMARK 500 ARG A 131 39.79 -97.87 REMARK 500 ALA A 177 -60.77 -97.19 REMARK 500 PHE A 197 -63.53 -97.20 REMARK 500 TYR A 228 -26.10 -173.82 REMARK 500 LEU B 80 59.98 -111.35 REMARK 500 ILE B 94 -62.92 -95.30 REMARK 500 ARG B 131 42.39 -98.44 REMARK 500 ALA B 177 -62.78 -99.75 REMARK 500 PHE B 197 -63.43 -101.86 REMARK 500 TYR B 228 -30.52 -176.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 802 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 191 OD1 REMARK 620 2 HOH A 928 O 96.3 REMARK 620 3 HOH A 955 O 75.8 170.0 REMARK 620 4 HOH A 985 O 85.5 84.6 88.6 REMARK 620 5 HOH B 901 O 164.0 99.0 88.4 91.1 REMARK 620 6 HOH B 916 O 95.1 95.8 91.1 179.2 88.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 803 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 191 OD2 REMARK 620 2 GLU A 195 OE2 85.2 REMARK 620 3 HOH A 958 O 88.5 173.6 REMARK 620 4 HOH A 968 O 87.3 81.4 99.6 REMARK 620 5 HOH A 985 O 99.3 91.9 87.9 170.2 REMARK 620 6 HOH B 930 O 177.4 95.5 90.8 90.3 83.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 802 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 913 O REMARK 620 2 HOH A 934 O 94.4 REMARK 620 3 ASP B 191 OD1 168.3 96.7 REMARK 620 4 HOH B 928 O 86.6 94.8 96.0 REMARK 620 5 HOH B 948 O 93.0 95.6 82.4 169.6 REMARK 620 6 HOH B 994 O 79.5 171.9 89.7 79.6 90.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 803 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 921 O REMARK 620 2 ASP B 191 OD2 175.5 REMARK 620 3 GLU B 195 OE2 91.3 87.2 REMARK 620 4 HOH B 963 O 94.8 87.0 172.2 REMARK 620 5 HOH B 965 O 93.0 91.1 83.4 91.5 REMARK 620 6 HOH B 994 O 78.0 97.6 86.5 99.5 166.3 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6AQJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURES OF STAPHYLOCOCCUS AUREUS KETOL-ACID REMARK 900 REDUCTOISOMERASE IN COMPLEX WITH TWO TRANSITION STATE ANALOGS THAT REMARK 900 HAVE BIOCIDAL ACTIVITY. DBREF 7PCC A 1 353 UNP Q2T3G7 Q2T3G7_BURTA 1 353 DBREF 7PCC B 1 353 UNP Q2T3G7 Q2T3G7_BURTA 1 353 SEQRES 1 A 353 MET ASN ASP LEU ILE TYR GLN ASP GLU HIS ALA SER LEU SEQRES 2 A 353 GLN PRO LEU GLU GLY ARG THR VAL ALA VAL ILE GLY TYR SEQRES 3 A 353 GLY ILE GLN GLY ARG ALA PHE ALA ALA ASN LEU ARG ASP SEQRES 4 A 353 SER GLY VAL ALA VAL ARG VAL GLY ASN ILE ASP ASP ARG SEQRES 5 A 353 TYR PHE GLU LEU ALA ARG ALA GLU GLY HIS ARG VAL THR SEQRES 6 A 353 ASN ILE ALA GLU ALA VAL ALA HIS ALA ASP ILE VAL LEU SEQRES 7 A 353 LEU LEU ILE PRO ASP GLU ALA HIS GLY ALA VAL PHE ASP SEQRES 8 A 353 VAL ASP ILE ALA PRO ASN LEU ARG ASP GLY ALA LEU LEU SEQRES 9 A 353 CYS VAL ALA HIS GLY HIS SER LEU VAL GLN GLY ASP VAL SEQRES 10 A 353 ARG PRO LEU PRO GLY ARG ASP LEU ALA MET LEU ALA PRO SEQRES 11 A 353 ARG MET TYR GLY ASP PRO ILE ARG ARG TYR TYR LEU ALA SEQRES 12 A 353 GLY GLN GLY ALA PRO ALA TYR PHE ASP ILE VAL ALA ASP SEQRES 13 A 353 HIS THR GLY ARG ALA ARG ASP ARG VAL LEU ALA ILE ALA SEQRES 14 A 353 ARG ALA VAL GLY PHE THR ARG ALA GLY VAL MET ALA LEU SEQRES 15 A 353 GLY TYR ARG GLN GLU THR PHE LEU ASP LEU PHE GLN GLU SEQRES 16 A 353 GLN PHE LEU ALA PRO ALA LEU VAL ASP LEU VAL GLU THR SEQRES 17 A 353 GLY PHE GLN VAL LEU VAL GLU ARG GLY PHE ASN PRO LYS SEQRES 18 A 353 ALA ALA LEU LEU GLU VAL TYR GLY SER GLY GLU MET GLY SEQRES 19 A 353 LYS MET MET LEU ASP GLY ALA ASP ILE GLY LEU ASP GLU SEQRES 20 A 353 VAL VAL ALA LEU GLN GLY SER PRO THR CYS GLN VAL GLY SEQRES 21 A 353 TYR HIS ARG TRP ARG GLY ARG THR LEU PRO THR ALA VAL SEQRES 22 A 353 ARG GLU LEU ALA ALA ARG VAL LEU ASP GLN ILE GLU GLY SEQRES 23 A 353 GLY ASP PHE SER ALA TYR LEU LYS GLU GLN ALA SER ASN SEQRES 24 A 353 ASP TYR ALA SER LEU ASP ASP ALA ARG ARG ALA ALA LEU SEQRES 25 A 353 LYS ARG PRO LEU ASN VAL ALA HIS ALA GLN VAL ARG ALA SEQRES 26 A 353 ALA PHE ARG PHE PRO THR GLU ALA ALA GLY GLY LEU TYR SEQRES 27 A 353 GLN ALA ALA GLN ALA PRO ALA ASP VAL GLU PRO GLU ALA SEQRES 28 A 353 ALA ARG SEQRES 1 B 353 MET ASN ASP LEU ILE TYR GLN ASP GLU HIS ALA SER LEU SEQRES 2 B 353 GLN PRO LEU GLU GLY ARG THR VAL ALA VAL ILE GLY TYR SEQRES 3 B 353 GLY ILE GLN GLY ARG ALA PHE ALA ALA ASN LEU ARG ASP SEQRES 4 B 353 SER GLY VAL ALA VAL ARG VAL GLY ASN ILE ASP ASP ARG SEQRES 5 B 353 TYR PHE GLU LEU ALA ARG ALA GLU GLY HIS ARG VAL THR SEQRES 6 B 353 ASN ILE ALA GLU ALA VAL ALA HIS ALA ASP ILE VAL LEU SEQRES 7 B 353 LEU LEU ILE PRO ASP GLU ALA HIS GLY ALA VAL PHE ASP SEQRES 8 B 353 VAL ASP ILE ALA PRO ASN LEU ARG ASP GLY ALA LEU LEU SEQRES 9 B 353 CYS VAL ALA HIS GLY HIS SER LEU VAL GLN GLY ASP VAL SEQRES 10 B 353 ARG PRO LEU PRO GLY ARG ASP LEU ALA MET LEU ALA PRO SEQRES 11 B 353 ARG MET TYR GLY ASP PRO ILE ARG ARG TYR TYR LEU ALA SEQRES 12 B 353 GLY GLN GLY ALA PRO ALA TYR PHE ASP ILE VAL ALA ASP SEQRES 13 B 353 HIS THR GLY ARG ALA ARG ASP ARG VAL LEU ALA ILE ALA SEQRES 14 B 353 ARG ALA VAL GLY PHE THR ARG ALA GLY VAL MET ALA LEU SEQRES 15 B 353 GLY TYR ARG GLN GLU THR PHE LEU ASP LEU PHE GLN GLU SEQRES 16 B 353 GLN PHE LEU ALA PRO ALA LEU VAL ASP LEU VAL GLU THR SEQRES 17 B 353 GLY PHE GLN VAL LEU VAL GLU ARG GLY PHE ASN PRO LYS SEQRES 18 B 353 ALA ALA LEU LEU GLU VAL TYR GLY SER GLY GLU MET GLY SEQRES 19 B 353 LYS MET MET LEU ASP GLY ALA ASP ILE GLY LEU ASP GLU SEQRES 20 B 353 VAL VAL ALA LEU GLN GLY SER PRO THR CYS GLN VAL GLY SEQRES 21 B 353 TYR HIS ARG TRP ARG GLY ARG THR LEU PRO THR ALA VAL SEQRES 22 B 353 ARG GLU LEU ALA ALA ARG VAL LEU ASP GLN ILE GLU GLY SEQRES 23 B 353 GLY ASP PHE SER ALA TYR LEU LYS GLU GLN ALA SER ASN SEQRES 24 B 353 ASP TYR ALA SER LEU ASP ASP ALA ARG ARG ALA ALA LEU SEQRES 25 B 353 LYS ARG PRO LEU ASN VAL ALA HIS ALA GLN VAL ARG ALA SEQRES 26 B 353 ALA PHE ARG PHE PRO THR GLU ALA ALA GLY GLY LEU TYR SEQRES 27 B 353 GLN ALA ALA GLN ALA PRO ALA ASP VAL GLU PRO GLU ALA SEQRES 28 B 353 ALA ARG HET NAD A 801 44 HET MG A 802 1 HET MG A 803 1 HET NAD B 801 44 HET MG B 802 1 HET MG B 803 1 HET GOL B 804 6 HET GOL B 805 6 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 MG 4(MG 2+) FORMUL 9 GOL 2(C3 H8 O3) FORMUL 11 HOH *249(H2 O) HELIX 1 AA1 GLN A 7 ALA A 11 5 5 HELIX 2 AA2 LEU A 13 GLU A 17 5 5 HELIX 3 AA3 GLY A 27 SER A 40 1 14 HELIX 4 AA4 ASP A 51 GLU A 60 1 10 HELIX 5 AA5 ASN A 66 HIS A 73 1 8 HELIX 6 AA6 PRO A 82 GLU A 84 5 3 HELIX 7 AA7 ALA A 85 ASP A 93 1 9 HELIX 8 AA8 ILE A 94 LEU A 98 5 5 HELIX 9 AA9 GLY A 109 GLN A 114 1 6 HELIX 10 AB1 TYR A 133 ALA A 143 1 11 HELIX 11 AB2 ARG A 160 GLY A 173 1 14 HELIX 12 AB3 PHE A 174 ALA A 177 5 4 HELIX 13 AB4 GLY A 183 PHE A 197 1 15 HELIX 14 AB5 PHE A 197 ARG A 216 1 20 HELIX 15 AB6 ASN A 219 TYR A 228 1 10 HELIX 16 AB7 GLY A 231 GLY A 244 1 14 HELIX 17 AB8 GLY A 244 GLY A 253 1 10 HELIX 18 AB9 SER A 254 ARG A 265 1 12 HELIX 19 AC1 PRO A 270 GLY A 286 1 17 HELIX 20 AC2 GLY A 287 SER A 298 1 12 HELIX 21 AC3 TYR A 301 LYS A 313 1 13 HELIX 22 AC4 ARG A 314 PHE A 327 1 14 HELIX 23 AC5 GLN B 7 ALA B 11 5 5 HELIX 24 AC6 LEU B 13 GLU B 17 5 5 HELIX 25 AC7 GLY B 27 SER B 40 1 14 HELIX 26 AC8 ASP B 51 GLU B 60 1 10 HELIX 27 AC9 ASN B 66 HIS B 73 1 8 HELIX 28 AD1 PRO B 82 GLU B 84 5 3 HELIX 29 AD2 ALA B 85 ASP B 93 1 9 HELIX 30 AD3 GLY B 109 GLN B 114 1 6 HELIX 31 AD4 TYR B 133 ALA B 143 1 11 HELIX 32 AD5 ARG B 160 GLY B 173 1 14 HELIX 33 AD6 PHE B 174 ALA B 177 5 4 HELIX 34 AD7 GLY B 183 PHE B 197 1 15 HELIX 35 AD8 PHE B 197 ARG B 216 1 20 HELIX 36 AD9 ASN B 219 TYR B 228 1 10 HELIX 37 AE1 GLY B 231 GLY B 244 1 14 HELIX 38 AE2 GLY B 244 GLY B 253 1 10 HELIX 39 AE3 SER B 254 ARG B 265 1 12 HELIX 40 AE4 THR B 271 GLY B 287 1 17 HELIX 41 AE5 GLY B 287 SER B 298 1 12 HELIX 42 AE6 TYR B 301 LYS B 313 1 13 HELIX 43 AE7 ARG B 314 PHE B 327 1 14 SHEET 1 AA1 9 ILE A 5 TYR A 6 0 SHEET 2 AA1 9 VAL A 179 ALA A 181 -1 O VAL A 179 N TYR A 6 SHEET 3 AA1 9 ALA A 149 ALA A 155 1 N ALA A 149 O MET A 180 SHEET 4 AA1 9 ASP A 124 PRO A 130 -1 N ALA A 129 O TYR A 150 SHEET 5 AA1 9 LEU A 103 VAL A 106 1 N VAL A 106 O LEU A 128 SHEET 6 AA1 9 ILE A 76 LEU A 79 1 N VAL A 77 O LEU A 103 SHEET 7 AA1 9 THR A 20 ILE A 24 1 N ILE A 24 O LEU A 78 SHEET 8 AA1 9 ALA A 43 GLY A 47 1 O ARG A 45 N VAL A 23 SHEET 9 AA1 9 VAL A 64 THR A 65 1 O THR A 65 N VAL A 46 SHEET 1 AA2 9 ILE B 5 TYR B 6 0 SHEET 2 AA2 9 VAL B 179 ALA B 181 -1 O VAL B 179 N TYR B 6 SHEET 3 AA2 9 ALA B 149 ASP B 156 1 N ALA B 149 O MET B 180 SHEET 4 AA2 9 ASP B 124 PRO B 130 -1 N ALA B 129 O TYR B 150 SHEET 5 AA2 9 LEU B 103 VAL B 106 1 N VAL B 106 O LEU B 128 SHEET 6 AA2 9 ILE B 76 LEU B 79 1 N LEU B 79 O CYS B 105 SHEET 7 AA2 9 THR B 20 ILE B 24 1 N ALA B 22 O ILE B 76 SHEET 8 AA2 9 ALA B 43 GLY B 47 1 O ARG B 45 N VAL B 23 SHEET 9 AA2 9 VAL B 64 THR B 65 1 O THR B 65 N VAL B 46 LINK OD1 ASP A 191 MG MG A 802 1555 1555 2.15 LINK OD2 ASP A 191 MG MG A 803 1555 1555 2.04 LINK OE2 GLU A 195 MG MG A 803 1555 1555 2.09 LINK MG MG A 802 O HOH A 928 1555 1555 2.08 LINK MG MG A 802 O HOH A 955 1555 1555 2.26 LINK MG MG A 802 O HOH A 985 1555 1555 2.21 LINK MG MG A 802 O HOH B 901 1555 1555 1.97 LINK MG MG A 802 O HOH B 916 1555 1555 2.13 LINK MG MG A 803 O HOH A 958 1555 1555 2.09 LINK MG MG A 803 O HOH A 968 1555 1555 2.23 LINK MG MG A 803 O HOH A 985 1555 1555 1.86 LINK MG MG A 803 O HOH B 930 1555 1555 2.08 LINK O HOH A 913 MG MG B 802 1555 1555 1.95 LINK O HOH A 921 MG MG B 803 1555 1555 2.20 LINK O HOH A 934 MG MG B 802 1555 1555 2.16 LINK OD1 ASP B 191 MG MG B 802 1555 1555 2.05 LINK OD2 ASP B 191 MG MG B 803 1555 1555 2.01 LINK OE2 GLU B 195 MG MG B 803 1555 1555 2.16 LINK MG MG B 802 O HOH B 928 1555 1555 2.12 LINK MG MG B 802 O HOH B 948 1555 1555 2.15 LINK MG MG B 802 O HOH B 994 1555 1555 2.29 LINK MG MG B 803 O HOH B 963 1555 1555 1.99 LINK MG MG B 803 O HOH B 965 1555 1555 2.24 LINK MG MG B 803 O HOH B 994 1555 1555 2.02 CRYST1 75.490 82.740 100.870 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013247 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012086 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009914 0.00000