HEADER MEMBRANE PROTEIN 16-AUG-21 7PH2 TITLE NANODISC RECONSTITUTED MSBA IN COMPLEX WITH NANOBODIES, SPIN-LABELED TITLE 2 AT POSITION A60C COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-DEPENDENT LIPID A-CORE FLIPPASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LIPID A EXPORT ATP-BINDING/PERMEASE PROTEIN MSBA,LIPID COMPND 5 FLIPPASE; COMPND 6 EC: 7.5.2.6; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: NB_MSBA#1; COMPND 10 CHAIN: C, D; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: NANOBODY IS LABELED WITH GMO-GD AT CYS60 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: MSBA, B0914, JW0897; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 10 ORGANISM_TAXID: 30538; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ABC TRANSPORTER, NANOBODY, GD-DOTA, MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR D.JANULIENE,K.PAREY,L.GALAZZO,G.MEIER,D.VECCHIS,B.STRIEDNIG,H.HILBI, AUTHOR 2 L.V.SCHAEFER,I.KUPROV,E.BORDIGNON,M.A.SEEGER,A.MOELLER REVDAT 2 26-OCT-22 7PH2 1 JRNL REVDAT 1 24-AUG-22 7PH2 0 JRNL AUTH L.GALAZZO,G.MEIER,D.JANULIENE,K.PAREY,D.DE VECCHIS, JRNL AUTH 2 B.STRIEDNIG,H.HILBI,L.V.SCHAFER,I.KUPROV,A.MOELLER, JRNL AUTH 3 E.BORDIGNON,M.A.SEEGER JRNL TITL THE ABC TRANSPORTER MSBA ADOPTS THE WIDE INWARD-OPEN JRNL TITL 2 CONFORMATION IN E. COLI CELLS. JRNL REF SCI ADV V. 8 N6845 2022 JRNL REFN ESSN 2375-2548 JRNL PMID 36223470 JRNL DOI 10.1126/SCIADV.ABN6845 REMARK 2 REMARK 2 RESOLUTION. 3.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CTFFIND, RELION, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.700 REMARK 3 NUMBER OF PARTICLES : 142832 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7PH2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1292115825. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : E. COLI MSBA IN COMPLEX WITH REMARK 245 NANOBODY NB_MSBA#1, LABELED REMARK 245 WITH GD-DOTA AT CYS60 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 2.60 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -10 REMARK 465 PRO A -9 REMARK 465 ASP A -8 REMARK 465 GLU A -7 REMARK 465 ALA A -6 REMARK 465 GLU A -5 REMARK 465 LYS A -4 REMARK 465 LEU A -3 REMARK 465 PHE A -2 REMARK 465 ASN A -1 REMARK 465 GLN A 0 REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 ASN A 3 REMARK 465 ASP A 4 REMARK 465 LYS A 5 REMARK 465 ASP A 6 REMARK 465 LEU A 7 REMARK 465 SER A 8 REMARK 465 THR A 9 REMARK 465 TRP A 10 REMARK 465 GLN A 11 REMARK 465 GLY A 581 REMARK 465 GLN A 582 REMARK 465 GLY B -10 REMARK 465 PRO B -9 REMARK 465 ASP B -8 REMARK 465 GLU B -7 REMARK 465 ALA B -6 REMARK 465 GLU B -5 REMARK 465 LYS B -4 REMARK 465 LEU B -3 REMARK 465 PHE B -2 REMARK 465 ASN B -1 REMARK 465 GLN B 0 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 ASN B 3 REMARK 465 ASP B 4 REMARK 465 LYS B 5 REMARK 465 ASP B 6 REMARK 465 LEU B 7 REMARK 465 SER B 8 REMARK 465 THR B 9 REMARK 465 TRP B 10 REMARK 465 GLN B 11 REMARK 465 GLY B 581 REMARK 465 GLN B 582 REMARK 465 GLY C -2 REMARK 465 PRO C -1 REMARK 465 SER C 0 REMARK 465 VAL C 112 REMARK 465 SER C 113 REMARK 465 GLY D -2 REMARK 465 PRO D -1 REMARK 465 SER D 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 12 OG1 CG2 REMARK 470 PHE A 13 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 14 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 15 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 16 CG CD1 CD2 REMARK 470 THR B 12 OG1 CG2 REMARK 470 PHE B 13 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 14 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 15 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 16 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 296 CB - CA - C ANGL. DEV. = -15.8 DEGREES REMARK 500 PRO A 297 CB - CA - C ANGL. DEV. = -17.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 62 -10.18 71.24 REMARK 500 LYS A 118 -5.59 75.64 REMARK 500 VAL A 147 -64.12 -109.59 REMARK 500 MET A 276 -166.66 -77.08 REMARK 500 ASP A 277 -6.29 73.37 REMARK 500 ASP A 323 59.92 -142.01 REMARK 500 ARG A 337 122.81 -171.07 REMARK 500 ARG A 345 113.54 -162.05 REMARK 500 ASN A 363 32.04 -140.03 REMARK 500 SER A 378 -5.21 -48.76 REMARK 500 PHE A 392 -68.65 -91.13 REMARK 500 ALA A 440 16.08 57.01 REMARK 500 ARG A 441 25.97 -147.92 REMARK 500 ASP A 471 3.09 -155.18 REMARK 500 VAL A 473 135.07 -36.16 REMARK 500 LEU A 480 81.12 59.95 REMARK 500 GLU A 514 -56.88 73.17 REMARK 500 ASN A 529 -138.58 -133.09 REMARK 500 ARG A 530 73.27 59.56 REMARK 500 THR A 531 133.53 -36.07 REMARK 500 HIS A 537 -18.16 -143.76 REMARK 500 ASP A 553 -12.50 71.91 REMARK 500 PHE B 116 40.69 -102.11 REMARK 500 LYS B 118 -1.37 78.03 REMARK 500 SER B 120 35.35 -151.37 REMARK 500 PRO B 253 3.96 -65.15 REMARK 500 MET B 276 -164.93 -79.80 REMARK 500 SER B 324 -142.71 -108.95 REMARK 500 ASP B 329 25.91 -142.91 REMARK 500 GLU B 336 -61.84 -93.65 REMARK 500 ARG B 441 19.52 -140.57 REMARK 500 ASN B 477 6.82 54.12 REMARK 500 SER B 509 -31.54 65.39 REMARK 500 GLU B 514 -39.64 63.91 REMARK 500 ASN B 529 -155.01 -140.15 REMARK 500 ARG B 530 75.08 65.24 REMARK 500 THR B 531 122.19 -37.10 REMARK 500 ASP B 553 -15.08 74.29 REMARK 500 VAL C 48 -55.98 -123.95 REMARK 500 CYS C 60 -94.62 -72.52 REMARK 500 ASP C 61 -54.07 -174.56 REMARK 500 SER D 55 80.84 70.17 REMARK 500 ARG D 66 -49.25 -134.40 REMARK 500 ALA D 91 -169.88 -161.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 148 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 GD C 201 GD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 88T C 200 N4 REMARK 620 2 88T C 200 O4 68.9 REMARK 620 3 88T C 200 N5 66.3 134.1 REMARK 620 4 88T C 200 O5 74.1 87.4 71.1 REMARK 620 5 88T C 200 N6 102.5 135.0 66.3 134.3 REMARK 620 6 88T C 200 O6 116.9 114.4 78.3 45.0 108.7 REMARK 620 7 88T C 200 N7 67.1 69.9 101.0 139.9 66.4 174.7 REMARK 620 8 88T C 200 O7 130.3 80.2 138.9 143.7 72.9 110.9 66.1 REMARK 620 9 88T C 200 O8 113.0 46.5 175.8 112.9 110.1 105.4 75.2 38.1 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 GD D 201 GD REMARK 620 N RES CSSEQI ATOM REMARK 620 1 88T D 200 N4 REMARK 620 2 88T D 200 O4 67.0 REMARK 620 3 88T D 200 N5 67.0 131.2 REMARK 620 4 88T D 200 O5 72.1 81.9 69.4 REMARK 620 5 88T D 200 N6 100.7 141.2 63.7 131.1 REMARK 620 6 88T D 200 O6 112.1 108.8 74.9 42.1 109.9 REMARK 620 7 88T D 200 N7 67.5 75.4 101.0 138.8 66.0 175.4 REMARK 620 8 88T D 200 O8 96.8 34.5 163.7 107.7 121.3 114.2 70.3 REMARK 620 9 88T D 200 O9 133.1 141.6 69.5 77.2 74.3 38.0 138.8 126.3 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-13404 RELATED DB: EMDB REMARK 900 NANODISC RECONSTITUTED MSBA IN COMPLEX WITH NANOBODIES, SPIN- REMARK 900 LABELED AT POSITION A60C DBREF 7PH2 A 1 582 UNP P60752 MSBA_ECOLI 1 582 DBREF 7PH2 B 1 582 UNP P60752 MSBA_ECOLI 1 582 DBREF 7PH2 C -2 113 PDB 7PH2 7PH2 -2 113 DBREF 7PH2 D -2 113 PDB 7PH2 7PH2 -2 113 SEQADV 7PH2 GLY A -10 UNP P60752 EXPRESSION TAG SEQADV 7PH2 PRO A -9 UNP P60752 EXPRESSION TAG SEQADV 7PH2 ASP A -8 UNP P60752 EXPRESSION TAG SEQADV 7PH2 GLU A -7 UNP P60752 EXPRESSION TAG SEQADV 7PH2 ALA A -6 UNP P60752 EXPRESSION TAG SEQADV 7PH2 GLU A -5 UNP P60752 EXPRESSION TAG SEQADV 7PH2 LYS A -4 UNP P60752 EXPRESSION TAG SEQADV 7PH2 LEU A -3 UNP P60752 EXPRESSION TAG SEQADV 7PH2 PHE A -2 UNP P60752 EXPRESSION TAG SEQADV 7PH2 ASN A -1 UNP P60752 EXPRESSION TAG SEQADV 7PH2 GLN A 0 UNP P60752 EXPRESSION TAG SEQADV 7PH2 GLY B -10 UNP P60752 EXPRESSION TAG SEQADV 7PH2 PRO B -9 UNP P60752 EXPRESSION TAG SEQADV 7PH2 ASP B -8 UNP P60752 EXPRESSION TAG SEQADV 7PH2 GLU B -7 UNP P60752 EXPRESSION TAG SEQADV 7PH2 ALA B -6 UNP P60752 EXPRESSION TAG SEQADV 7PH2 GLU B -5 UNP P60752 EXPRESSION TAG SEQADV 7PH2 LYS B -4 UNP P60752 EXPRESSION TAG SEQADV 7PH2 LEU B -3 UNP P60752 EXPRESSION TAG SEQADV 7PH2 PHE B -2 UNP P60752 EXPRESSION TAG SEQADV 7PH2 ASN B -1 UNP P60752 EXPRESSION TAG SEQADV 7PH2 GLN B 0 UNP P60752 EXPRESSION TAG SEQRES 1 A 593 GLY PRO ASP GLU ALA GLU LYS LEU PHE ASN GLN MET HIS SEQRES 2 A 593 ASN ASP LYS ASP LEU SER THR TRP GLN THR PHE ARG ARG SEQRES 3 A 593 LEU TRP PRO THR ILE ALA PRO PHE LYS ALA GLY LEU ILE SEQRES 4 A 593 VAL ALA GLY VAL ALA LEU ILE LEU ASN ALA ALA SER ASP SEQRES 5 A 593 THR PHE MET LEU SER LEU LEU LYS PRO LEU LEU ASP ASP SEQRES 6 A 593 GLY PHE GLY LYS THR ASP ARG SER VAL LEU VAL TRP MET SEQRES 7 A 593 PRO LEU VAL VAL ILE GLY LEU MET ILE LEU ARG GLY ILE SEQRES 8 A 593 THR SER TYR VAL SER SER TYR CYS ILE SER TRP VAL SER SEQRES 9 A 593 GLY LYS VAL VAL MET THR MET ARG ARG ARG LEU PHE GLY SEQRES 10 A 593 HIS MET MET GLY MET PRO VAL SER PHE PHE ASP LYS GLN SEQRES 11 A 593 SER THR GLY THR LEU LEU SER ARG ILE THR TYR ASP SER SEQRES 12 A 593 GLU GLN VAL ALA SER SER SER SER GLY ALA LEU ILE THR SEQRES 13 A 593 VAL VAL ARG GLU GLY ALA SER ILE ILE GLY LEU PHE ILE SEQRES 14 A 593 MET MET PHE TYR TYR SER TRP GLN LEU SER ILE ILE LEU SEQRES 15 A 593 ILE VAL LEU ALA PRO ILE VAL SER ILE ALA ILE ARG VAL SEQRES 16 A 593 VAL SER LYS ARG PHE ARG ASN ILE SER LYS ASN MET GLN SEQRES 17 A 593 ASN THR MET GLY GLN VAL THR THR SER ALA GLU GLN MET SEQRES 18 A 593 LEU LYS GLY HIS LYS GLU VAL LEU ILE PHE GLY GLY GLN SEQRES 19 A 593 GLU VAL GLU THR LYS ARG PHE ASP LYS VAL SER ASN ARG SEQRES 20 A 593 MET ARG LEU GLN GLY MET LYS MET VAL SER ALA SER SER SEQRES 21 A 593 ILE SER ASP PRO ILE ILE GLN LEU ILE ALA SER LEU ALA SEQRES 22 A 593 LEU ALA PHE VAL LEU TYR ALA ALA SER PHE PRO SER VAL SEQRES 23 A 593 MET ASP SER LEU THR ALA GLY THR ILE THR VAL VAL PHE SEQRES 24 A 593 SER SER MET ILE ALA LEU MET ARG PRO LEU LYS SER LEU SEQRES 25 A 593 THR ASN VAL ASN ALA GLN PHE GLN ARG GLY MET ALA ALA SEQRES 26 A 593 CYS GLN THR LEU PHE THR ILE LEU ASP SER GLU GLN GLU SEQRES 27 A 593 LYS ASP GLU GLY LYS ARG VAL ILE GLU ARG ALA THR GLY SEQRES 28 A 593 ASP VAL GLU PHE ARG ASN VAL THR PHE THR TYR PRO GLY SEQRES 29 A 593 ARG ASP VAL PRO ALA LEU ARG ASN ILE ASN LEU LYS ILE SEQRES 30 A 593 PRO ALA GLY LYS THR VAL ALA LEU VAL GLY ARG SER GLY SEQRES 31 A 593 SER GLY LYS SER THR ILE ALA SER LEU ILE THR ARG PHE SEQRES 32 A 593 TYR ASP ILE ASP GLU GLY GLU ILE LEU MET ASP GLY HIS SEQRES 33 A 593 ASP LEU ARG GLU TYR THR LEU ALA SER LEU ARG ASN GLN SEQRES 34 A 593 VAL ALA LEU VAL SER GLN ASN VAL HIS LEU PHE ASN ASP SEQRES 35 A 593 THR VAL ALA ASN ASN ILE ALA TYR ALA ARG THR GLU GLN SEQRES 36 A 593 TYR SER ARG GLU GLN ILE GLU GLU ALA ALA ARG MET ALA SEQRES 37 A 593 TYR ALA MET ASP PHE ILE ASN LYS MET ASP ASN GLY LEU SEQRES 38 A 593 ASP THR VAL ILE GLY GLU ASN GLY VAL LEU LEU SER GLY SEQRES 39 A 593 GLY GLN ARG GLN ARG ILE ALA ILE ALA ARG ALA LEU LEU SEQRES 40 A 593 ARG ASP SER PRO ILE LEU ILE LEU ASP GLU ALA THR SER SEQRES 41 A 593 ALA LEU ASP THR GLU SER GLU ARG ALA ILE GLN ALA ALA SEQRES 42 A 593 LEU ASP GLU LEU GLN LYS ASN ARG THR SER LEU VAL ILE SEQRES 43 A 593 ALA HIS ARG LEU SER THR ILE GLU LYS ALA ASP GLU ILE SEQRES 44 A 593 VAL VAL VAL GLU ASP GLY VAL ILE VAL GLU ARG GLY THR SEQRES 45 A 593 HIS ASN ASP LEU LEU GLU HIS ARG GLY VAL TYR ALA GLN SEQRES 46 A 593 LEU HIS LYS MET GLN PHE GLY GLN SEQRES 1 B 593 GLY PRO ASP GLU ALA GLU LYS LEU PHE ASN GLN MET HIS SEQRES 2 B 593 ASN ASP LYS ASP LEU SER THR TRP GLN THR PHE ARG ARG SEQRES 3 B 593 LEU TRP PRO THR ILE ALA PRO PHE LYS ALA GLY LEU ILE SEQRES 4 B 593 VAL ALA GLY VAL ALA LEU ILE LEU ASN ALA ALA SER ASP SEQRES 5 B 593 THR PHE MET LEU SER LEU LEU LYS PRO LEU LEU ASP ASP SEQRES 6 B 593 GLY PHE GLY LYS THR ASP ARG SER VAL LEU VAL TRP MET SEQRES 7 B 593 PRO LEU VAL VAL ILE GLY LEU MET ILE LEU ARG GLY ILE SEQRES 8 B 593 THR SER TYR VAL SER SER TYR CYS ILE SER TRP VAL SER SEQRES 9 B 593 GLY LYS VAL VAL MET THR MET ARG ARG ARG LEU PHE GLY SEQRES 10 B 593 HIS MET MET GLY MET PRO VAL SER PHE PHE ASP LYS GLN SEQRES 11 B 593 SER THR GLY THR LEU LEU SER ARG ILE THR TYR ASP SER SEQRES 12 B 593 GLU GLN VAL ALA SER SER SER SER GLY ALA LEU ILE THR SEQRES 13 B 593 VAL VAL ARG GLU GLY ALA SER ILE ILE GLY LEU PHE ILE SEQRES 14 B 593 MET MET PHE TYR TYR SER TRP GLN LEU SER ILE ILE LEU SEQRES 15 B 593 ILE VAL LEU ALA PRO ILE VAL SER ILE ALA ILE ARG VAL SEQRES 16 B 593 VAL SER LYS ARG PHE ARG ASN ILE SER LYS ASN MET GLN SEQRES 17 B 593 ASN THR MET GLY GLN VAL THR THR SER ALA GLU GLN MET SEQRES 18 B 593 LEU LYS GLY HIS LYS GLU VAL LEU ILE PHE GLY GLY GLN SEQRES 19 B 593 GLU VAL GLU THR LYS ARG PHE ASP LYS VAL SER ASN ARG SEQRES 20 B 593 MET ARG LEU GLN GLY MET LYS MET VAL SER ALA SER SER SEQRES 21 B 593 ILE SER ASP PRO ILE ILE GLN LEU ILE ALA SER LEU ALA SEQRES 22 B 593 LEU ALA PHE VAL LEU TYR ALA ALA SER PHE PRO SER VAL SEQRES 23 B 593 MET ASP SER LEU THR ALA GLY THR ILE THR VAL VAL PHE SEQRES 24 B 593 SER SER MET ILE ALA LEU MET ARG PRO LEU LYS SER LEU SEQRES 25 B 593 THR ASN VAL ASN ALA GLN PHE GLN ARG GLY MET ALA ALA SEQRES 26 B 593 CYS GLN THR LEU PHE THR ILE LEU ASP SER GLU GLN GLU SEQRES 27 B 593 LYS ASP GLU GLY LYS ARG VAL ILE GLU ARG ALA THR GLY SEQRES 28 B 593 ASP VAL GLU PHE ARG ASN VAL THR PHE THR TYR PRO GLY SEQRES 29 B 593 ARG ASP VAL PRO ALA LEU ARG ASN ILE ASN LEU LYS ILE SEQRES 30 B 593 PRO ALA GLY LYS THR VAL ALA LEU VAL GLY ARG SER GLY SEQRES 31 B 593 SER GLY LYS SER THR ILE ALA SER LEU ILE THR ARG PHE SEQRES 32 B 593 TYR ASP ILE ASP GLU GLY GLU ILE LEU MET ASP GLY HIS SEQRES 33 B 593 ASP LEU ARG GLU TYR THR LEU ALA SER LEU ARG ASN GLN SEQRES 34 B 593 VAL ALA LEU VAL SER GLN ASN VAL HIS LEU PHE ASN ASP SEQRES 35 B 593 THR VAL ALA ASN ASN ILE ALA TYR ALA ARG THR GLU GLN SEQRES 36 B 593 TYR SER ARG GLU GLN ILE GLU GLU ALA ALA ARG MET ALA SEQRES 37 B 593 TYR ALA MET ASP PHE ILE ASN LYS MET ASP ASN GLY LEU SEQRES 38 B 593 ASP THR VAL ILE GLY GLU ASN GLY VAL LEU LEU SER GLY SEQRES 39 B 593 GLY GLN ARG GLN ARG ILE ALA ILE ALA ARG ALA LEU LEU SEQRES 40 B 593 ARG ASP SER PRO ILE LEU ILE LEU ASP GLU ALA THR SER SEQRES 41 B 593 ALA LEU ASP THR GLU SER GLU ARG ALA ILE GLN ALA ALA SEQRES 42 B 593 LEU ASP GLU LEU GLN LYS ASN ARG THR SER LEU VAL ILE SEQRES 43 B 593 ALA HIS ARG LEU SER THR ILE GLU LYS ALA ASP GLU ILE SEQRES 44 B 593 VAL VAL VAL GLU ASP GLY VAL ILE VAL GLU ARG GLY THR SEQRES 45 B 593 HIS ASN ASP LEU LEU GLU HIS ARG GLY VAL TYR ALA GLN SEQRES 46 B 593 LEU HIS LYS MET GLN PHE GLY GLN SEQRES 1 C 116 GLY PRO SER GLN MET GLN LEU VAL GLU SER GLY GLY GLY SEQRES 2 C 116 LEU VAL GLN ALA GLY GLY SER LEU ARG LEU SER CYS ALA SEQRES 3 C 116 VAL SER GLY SER ILE PHE SER ILE ILE THR LEU ALA TRP SEQRES 4 C 116 TYR ARG GLN ALA PRO GLY LYS PRO ARG GLU ASN VAL ALA SEQRES 5 C 116 THR ILE THR ARG GLY SER ARG THR SER TYR CYS ASP SER SEQRES 6 C 116 VAL LYS GLY ARG PHE THR ILE SER LYS ASP ASN ALA LYS SEQRES 7 C 116 SER THR VAL TYR LEU GLN MET ASN LYS LEU LYS PRO GLU SEQRES 8 C 116 ASP THR ALA ASP TYR TYR CYS ASN ALA GLU GLY PRO ALA SEQRES 9 C 116 GLY TYR TRP GLY GLN GLY THR PRO VAL THR VAL SER SEQRES 1 D 116 GLY PRO SER GLN MET GLN LEU VAL GLU SER GLY GLY GLY SEQRES 2 D 116 LEU VAL GLN ALA GLY GLY SER LEU ARG LEU SER CYS ALA SEQRES 3 D 116 VAL SER GLY SER ILE PHE SER ILE ILE THR LEU ALA TRP SEQRES 4 D 116 TYR ARG GLN ALA PRO GLY LYS PRO ARG GLU ASN VAL ALA SEQRES 5 D 116 THR ILE THR ARG GLY SER ARG THR SER TYR CYS ASP SER SEQRES 6 D 116 VAL LYS GLY ARG PHE THR ILE SER LYS ASP ASN ALA LYS SEQRES 7 D 116 SER THR VAL TYR LEU GLN MET ASN LYS LEU LYS PRO GLU SEQRES 8 D 116 ASP THR ALA ASP TYR TYR CYS ASN ALA GLU GLY PRO ALA SEQRES 9 D 116 GLY TYR TRP GLY GLN GLY THR PRO VAL THR VAL SER HET EIW A 601 150 HET 88T C 200 37 HET GD C 201 1 HET 88T D 200 37 HET GD D 201 1 HETNAM EIW (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-BIS(OXIDANYL) HETNAM 2 EIW ETHYL]-4-[(2~{R},3~{S},4~{S},5~{R},6~{R})-6-[(1~{S})- HETNAM 3 EIW 1,2-BIS(OXIDANYL)ETHYL]-4-[(2~{R},3~{S},4~{S},5~{S}, HETNAM 4 EIW 6~{R})-6-[(1~{S})-1,2-BIS(OXIDANYL)ETHYL]-3,4,5- HETNAM 5 EIW TRIS(OXIDANYL)OXAN-2-YL]OXY-3,5-BIS(OXIDANYL)OXAN-2- HETNAM 6 EIW YL]OXY-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-4-[(3~{R})- HETNAM 7 EIW 3-NONANOYLOXYTETRADECANOYL]OXY-5-[[(3~{R})-3- HETNAM 8 EIW OCTANOYLOXYTETRADECANOYL]AMINO]-6-[[(2~{R},3~{S}, HETNAM 9 EIW 4~{S},5~{S},6~{R})-3-OXIDANYL-5-[[(3~{R})-3- HETNAM 10 EIW OXIDANYLNONANOYL]AMINO]-4-[(3~{R})-3- HETNAM 11 EIW OXIDANYLTETRADECANOYL]OXY-6-PHOSPHONOOXY-OXAN-2- HETNAM 12 EIW YL]METHOXY]-3-PHOSPHONOOXY-OXAN-2-YL]METHOXY]-5- HETNAM 13 EIW OXIDANYL-OXANE-2-CARBOXYLIC ACID HETNAM 88T (1~{R},4~{R},11~{S},14~{S},19~{Z})-19-[2-[2,5- HETNAM 2 88T BIS(OXIDANYLIDENE)PYRROLIDIN-1-YL]ETHYLIMINO]-7,8,17, HETNAM 3 88T 18-TETRAOXA-1,4,11,14-TETRAZATRICYCLO[12.6.2.2^{4, HETNAM 4 88T 11}]TETRACOSANE-6,9,16-TRIONE HETNAM GD GADOLINIUM ATOM FORMUL 5 EIW C102 H186 N2 O44 P2 FORMUL 6 88T 2(C22 H32 N6 O9) FORMUL 7 GD 2(GD) HELIX 1 AA1 THR A 12 PRO A 22 5 11 HELIX 2 AA2 PHE A 23 LYS A 58 1 36 HELIX 3 AA3 VAL A 65 HIS A 107 1 43 HELIX 4 AA4 PRO A 112 ASP A 117 5 6 HELIX 5 AA5 GLY A 122 TYR A 162 1 41 HELIX 6 AA6 SER A 168 SER A 193 1 26 HELIX 7 AA7 ASN A 195 LEU A 211 1 17 HELIX 8 AA8 GLY A 213 ILE A 219 1 7 HELIX 9 AA9 GLN A 223 ILE A 250 1 28 HELIX 10 AB1 SER A 251 ALA A 270 1 20 HELIX 11 AB2 GLY A 282 LEU A 294 1 13 HELIX 12 AB3 LEU A 294 ASN A 303 1 10 HELIX 13 AB4 VAL A 304 ASP A 323 1 20 HELIX 14 AB5 THR A 411 GLN A 418 1 8 HELIX 15 AB6 THR A 432 ILE A 437 1 6 HELIX 16 AB7 SER A 446 ALA A 457 1 12 HELIX 17 AB8 ALA A 459 LYS A 465 1 7 HELIX 18 AB9 SER A 482 ASP A 498 1 17 HELIX 19 AC1 GLU A 514 GLN A 527 1 14 HELIX 20 AC2 ARG A 538 ALA A 545 1 8 HELIX 21 AC3 HIS A 562 HIS A 568 1 7 HELIX 22 AC4 TYR A 572 GLN A 579 1 8 HELIX 23 AC5 PHE B 13 ARG B 15 5 3 HELIX 24 AC6 LEU B 16 ALA B 21 1 6 HELIX 25 AC7 PHE B 23 ASP B 54 1 32 HELIX 26 AC8 ASP B 60 LEU B 64 5 5 HELIX 27 AC9 VAL B 65 CYS B 88 1 24 HELIX 28 AD1 SER B 93 GLY B 106 1 14 HELIX 29 AD2 PRO B 112 ASP B 117 5 6 HELIX 30 AD3 GLY B 122 THR B 129 1 8 HELIX 31 AD4 THR B 129 TYR B 162 1 34 HELIX 32 AD5 TRP B 165 ASN B 195 1 31 HELIX 33 AD6 ASN B 195 GLY B 213 1 19 HELIX 34 AD7 GLY B 213 ILE B 219 1 7 HELIX 35 AD8 GLN B 223 SER B 249 1 27 HELIX 36 AD9 SER B 251 ALA B 270 1 20 HELIX 37 AE1 THR B 280 LEU B 294 1 15 HELIX 38 AE2 LEU B 294 VAL B 304 1 11 HELIX 39 AE3 VAL B 304 ASP B 323 1 20 HELIX 40 AE4 LYS B 382 ALA B 386 5 5 HELIX 41 AE5 ASP B 406 TYR B 410 5 5 HELIX 42 AE6 THR B 411 ARG B 416 1 6 HELIX 43 AE7 THR B 432 ILE B 437 1 6 HELIX 44 AE8 SER B 446 ALA B 457 1 12 HELIX 45 AE9 ALA B 459 ASN B 464 1 6 HELIX 46 AF1 ASN B 468 THR B 472 5 5 HELIX 47 AF2 SER B 482 ASP B 498 1 17 HELIX 48 AF3 GLU B 514 GLN B 527 1 14 HELIX 49 AF4 ARG B 538 LYS B 544 1 7 HELIX 50 AF5 THR B 561 LEU B 566 1 6 HELIX 51 AF6 TYR B 572 LYS B 577 1 6 HELIX 52 AF7 LYS C 86 THR C 90 5 5 HELIX 53 AF8 LYS D 86 THR D 90 5 5 SHEET 1 AA1 6 VAL A 419 ALA A 420 0 SHEET 2 AA1 6 ILE A 501 ILE A 503 1 N ILE A 503 O ALA A 420 SHEET 3 AA1 6 SER A 532 VAL A 534 1 O LEU A 533 N LEU A 502 SHEET 4 AA1 6 THR A 371 LEU A 374 1 N VAL A 372 O VAL A 534 SHEET 5 AA1 6 GLU A 547 VAL A 551 1 O VAL A 549 N ALA A 373 SHEET 6 AA1 6 ILE A 556 GLY A 560 -1 O GLY A 560 N ILE A 548 SHEET 1 AA2 6 VAL B 419 ALA B 420 0 SHEET 2 AA2 6 ILE B 501 LEU B 502 1 O ILE B 501 N ALA B 420 SHEET 3 AA2 6 THR B 531 ILE B 535 1 O LEU B 533 N LEU B 502 SHEET 4 AA2 6 THR B 371 VAL B 375 1 N LEU B 374 O VAL B 534 SHEET 5 AA2 6 GLU B 547 VAL B 551 1 O VAL B 549 N ALA B 373 SHEET 6 AA2 6 ILE B 556 GLY B 560 -1 O GLY B 560 N ILE B 548 SHEET 1 AA3 4 GLN C 3 SER C 7 0 SHEET 2 AA3 4 SER C 17 SER C 25 -1 O SER C 25 N GLN C 3 SHEET 3 AA3 4 THR C 77 ASN C 83 -1 O LEU C 80 N LEU C 20 SHEET 4 AA3 4 PHE C 67 LYS C 71 -1 N SER C 70 O TYR C 79 SHEET 1 AA4 5 SER C 58 TYR C 59 0 SHEET 2 AA4 5 ARG C 45 ILE C 51 -1 N THR C 50 O SER C 58 SHEET 3 AA4 5 LEU C 34 GLN C 39 -1 N LEU C 34 O ILE C 51 SHEET 4 AA4 5 ALA C 91 ALA C 97 -1 O TYR C 94 N TYR C 37 SHEET 5 AA4 5 TYR C 103 TRP C 104 -1 O TYR C 103 N ALA C 97 SHEET 1 AA5 5 SER C 58 TYR C 59 0 SHEET 2 AA5 5 ARG C 45 ILE C 51 -1 N THR C 50 O SER C 58 SHEET 3 AA5 5 LEU C 34 GLN C 39 -1 N LEU C 34 O ILE C 51 SHEET 4 AA5 5 ALA C 91 ALA C 97 -1 O TYR C 94 N TYR C 37 SHEET 5 AA5 5 THR C 108 VAL C 110 -1 O THR C 108 N TYR C 93 SHEET 1 AA6 4 GLN D 3 SER D 7 0 SHEET 2 AA6 4 SER D 17 SER D 25 -1 O SER D 25 N GLN D 3 SHEET 3 AA6 4 THR D 77 ASN D 83 -1 O LEU D 80 N LEU D 20 SHEET 4 AA6 4 PHE D 67 ASP D 72 -1 N ASP D 72 O THR D 77 SHEET 1 AA7 4 ARG D 45 ILE D 51 0 SHEET 2 AA7 4 LEU D 34 GLN D 39 -1 N LEU D 34 O ILE D 51 SHEET 3 AA7 4 ALA D 91 ALA D 97 -1 O ASN D 96 N ALA D 35 SHEET 4 AA7 4 TYR D 103 TRP D 104 -1 O TYR D 103 N ALA D 97 SHEET 1 AA8 4 ARG D 45 ILE D 51 0 SHEET 2 AA8 4 LEU D 34 GLN D 39 -1 N LEU D 34 O ILE D 51 SHEET 3 AA8 4 ALA D 91 ALA D 97 -1 O ASN D 96 N ALA D 35 SHEET 4 AA8 4 THR D 108 VAL D 110 -1 O VAL D 110 N ALA D 91 SSBOND 1 CYS C 22 CYS C 95 1555 1555 2.04 SSBOND 2 CYS D 22 CYS D 95 1555 1555 2.05 LINK SG CYS C 60 C4 88T C 200 1555 1555 1.83 LINK SG CYS D 60 C4 88T D 200 1555 1555 1.80 LINK N4 88T C 200 GD GD C 201 1555 1555 2.62 LINK O4 88T C 200 GD GD C 201 1555 1555 2.27 LINK N5 88T C 200 GD GD C 201 1555 1555 2.60 LINK O5 88T C 200 GD GD C 201 1555 1555 3.09 LINK N6 88T C 200 GD GD C 201 1555 1555 2.66 LINK O6 88T C 200 GD GD C 201 1555 1555 2.25 LINK N7 88T C 200 GD GD C 201 1555 1555 2.63 LINK O7 88T C 200 GD GD C 201 1555 1555 3.47 LINK O8 88T C 200 GD GD C 201 1555 1555 2.27 LINK O9 88T C 200 GD GD C 201 1555 1555 2.27 LINK N4 88T D 200 GD GD D 201 1555 1555 2.64 LINK O4 88T D 200 GD GD D 201 1555 1555 2.26 LINK N5 88T D 200 GD GD D 201 1555 1555 2.64 LINK O5 88T D 200 GD GD D 201 1555 1555 3.26 LINK N6 88T D 200 GD GD D 201 1555 1555 2.62 LINK O6 88T D 200 GD GD D 201 1555 1555 2.29 LINK N7 88T D 200 GD GD D 201 1555 1555 2.60 LINK O8 88T D 200 GD GD D 201 1555 1555 2.25 LINK O9 88T D 200 GD GD D 201 1555 1555 2.30 LINK O10 88T D 200 GD GD D 201 1555 1555 2.74 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000