HEADER HYDROLASE 18-OCT-21 7Q1B TITLE CRYSTAL STRUCTURE OF TRYPANOSOMA CRUZI HISTONE DEACETYLASE DAC2 TITLE 2 COMPLEXED WITH QUISINOSTAT COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE DEACETYLASE DAC2; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA CRUZI; SOURCE 3 ORGANISM_TAXID: 5693; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS EPIGENETICS, TRYPANOSOMA CRUZI, HISTONE DEACETYLASE, DAC2, PATHOGEN, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.MAREK,E.RAMOS-MORALES,C.ROMIER REVDAT 3 31-JAN-24 7Q1B 1 REMARK REVDAT 2 02-FEB-22 7Q1B 1 JRNL REVDAT 1 15-DEC-21 7Q1B 0 JRNL AUTH M.MAREK,E.RAMOS-MORALES,G.F.A.PICCHI-CONSTANTE,T.BAYER, JRNL AUTH 2 C.NORSTROM,D.HERP,P.A.SALES-JUNIOR,E.P.GUERRA-SLOMPO, JRNL AUTH 3 K.HAUSMANN,A.CHAKRABARTI,T.B.SHAIK,A.MERZ,E.TROESCH, JRNL AUTH 4 K.SCHMIDTKUNZ,S.GOLDENBERG,R.J.PIERCE,M.M.MOURAO,M.JUNG, JRNL AUTH 5 J.SCHULTZ,W.SIPPL,N.I.T.ZANCHIN,C.ROMIER JRNL TITL SPECIES-SELECTIVE TARGETING OF PATHOGENS REVEALED BY THE JRNL TITL 2 ATYPICAL STRUCTURE AND ACTIVE SITE OF TRYPANOSOMA CRUZI JRNL TITL 3 HISTONE DEACETYLASE DAC2. JRNL REF CELL REP V. 37 10129 2021 JRNL REFN ESSN 2211-1247 JRNL PMID 34936867 JRNL DOI 10.1016/J.CELREP.2021.110129 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19RC4_4035 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 46459 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4462 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.7900 - 5.4400 1.00 2830 152 0.1665 0.1867 REMARK 3 2 5.4400 - 4.3200 1.00 2837 154 0.1409 0.1548 REMARK 3 3 4.3200 - 3.7700 1.00 2817 150 0.1438 0.1658 REMARK 3 4 3.7700 - 3.4300 1.00 2835 150 0.1598 0.1814 REMARK 3 5 3.4300 - 3.1800 1.00 2859 148 0.1786 0.2181 REMARK 3 6 3.1800 - 3.0000 1.00 2827 151 0.1746 0.1952 REMARK 3 7 3.0000 - 2.8500 1.00 2833 144 0.1900 0.2290 REMARK 3 8 2.8500 - 2.7200 1.00 2827 150 0.1886 0.2401 REMARK 3 9 2.7200 - 2.6200 1.00 2840 152 0.1868 0.2327 REMARK 3 10 2.6200 - 2.5300 1.00 2835 147 0.1791 0.2117 REMARK 3 11 2.5300 - 2.4500 1.00 2832 152 0.1963 0.1984 REMARK 3 12 2.4500 - 2.3800 1.00 2823 149 0.1913 0.2137 REMARK 3 13 2.3800 - 2.3200 1.00 2850 145 0.1802 0.1939 REMARK 3 14 2.3200 - 2.2600 1.00 2796 151 0.1910 0.2266 REMARK 3 15 2.2600 - 2.2100 1.00 2838 149 0.2232 0.2534 REMARK 3 16 2.2100 - 2.1600 1.00 2831 145 0.2217 0.2539 REMARK 3 17 2.1600 - 2.1200 1.00 2864 155 0.2243 0.2488 REMARK 3 18 2.1200 - 2.0800 1.00 2814 147 0.2276 0.2623 REMARK 3 19 2.0800 - 2.0400 1.00 2829 148 0.2427 0.2840 REMARK 3 20 2.0400 - 2.0100 1.00 2811 146 0.2338 0.2956 REMARK 3 21 2.0100 - 1.9700 1.00 2860 151 0.2556 0.2854 REMARK 3 22 1.9700 - 1.9400 1.00 2843 147 0.2659 0.3230 REMARK 3 23 1.9400 - 1.9100 1.00 2769 143 0.2858 0.3580 REMARK 3 24 1.9100 - 1.8900 1.00 2884 150 0.3163 0.3767 REMARK 3 25 1.8900 - 1.8600 1.00 2801 150 0.3407 0.3531 REMARK 3 26 1.8600 - 1.8400 0.99 2768 143 0.3810 0.3178 REMARK 3 27 1.8400 - 1.8100 0.99 2877 155 0.3948 0.4171 REMARK 3 28 1.8100 - 1.7900 0.99 2769 145 0.4826 0.5284 REMARK 3 29 1.7900 - 1.7700 1.00 2873 152 0.5189 0.5368 REMARK 3 30 1.7700 - 1.7500 0.97 2686 141 0.5788 0.6175 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.323 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.833 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.14 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3147 REMARK 3 ANGLE : 0.743 4273 REMARK 3 CHIRALITY : 0.049 485 REMARK 3 PLANARITY : 0.007 570 REMARK 3 DIHEDRAL : 11.907 1146 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 22.5271 114.5181 16.0733 REMARK 3 T TENSOR REMARK 3 T11: 0.2712 T22: 0.2687 REMARK 3 T33: 0.2599 T12: -0.0175 REMARK 3 T13: 0.0299 T23: -0.0787 REMARK 3 L TENSOR REMARK 3 L11: 1.4696 L22: 0.8608 REMARK 3 L33: 0.5590 L12: 0.3134 REMARK 3 L13: 0.2680 L23: -0.0439 REMARK 3 S TENSOR REMARK 3 S11: -0.1269 S12: 0.1112 S13: -0.2635 REMARK 3 S21: -0.0356 S22: 0.0965 S23: -0.0689 REMARK 3 S31: -0.0156 S32: -0.0448 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Q1B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1292118752. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00004 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50638 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 13.00 REMARK 200 R MERGE FOR SHELL (I) : 2.38700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1T67 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5%(W/V) PEG 6000, 0.1 M HEPES PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.08350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.79200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.73100 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 41.08350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.79200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.73100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.08350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.79200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.73100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 41.08350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 46.79200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.73100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 3 REMARK 465 THR A 4 REMARK 465 ASP A 5 REMARK 465 ALA A 6 REMARK 465 VAL A 7 REMARK 465 ALA A 8 REMARK 465 GLY A 9 REMARK 465 LYS A 10 REMARK 465 THR A 11 REMARK 465 SER A 12 REMARK 465 LYS A 55 REMARK 465 LYS A 56 REMARK 465 SER A 57 REMARK 465 GLY A 58 REMARK 465 ASP A 59 REMARK 465 ALA A 60 REMARK 465 ALA A 129 REMARK 465 SER A 130 REMARK 465 THR A 131 REMARK 465 VAL A 132 REMARK 465 LYS A 133 REMARK 465 PRO A 134 REMARK 465 PRO A 135 REMARK 465 TYR A 448 REMARK 465 GLY A 449 REMARK 465 SER A 450 REMARK 465 PRO A 451 REMARK 465 LEU A 452 REMARK 465 PHE A 453 REMARK 465 MET A 454 REMARK 465 ARG A 455 REMARK 465 MET A 456 REMARK 465 GLN A 457 REMARK 465 ARG A 458 REMARK 465 ALA A 459 REMARK 465 ALA A 460 REMARK 465 THR A 461 REMARK 465 LYS A 462 REMARK 465 GLU A 463 REMARK 465 ALA A 464 REMARK 465 LEU A 465 REMARK 465 ARG A 466 REMARK 465 ARG A 467 REMARK 465 ARG A 468 REMARK 465 LEU A 469 REMARK 465 ASN A 470 REMARK 465 GLN A 471 REMARK 465 GLU A 472 REMARK 465 GLN A 473 REMARK 465 ASP A 474 REMARK 465 GLU A 475 REMARK 465 GLU A 476 REMARK 465 GLU A 477 REMARK 465 ASP A 478 REMARK 465 ALA A 479 REMARK 465 GLU A 480 REMARK 465 ASP A 481 REMARK 465 SER A 482 REMARK 465 GLY A 483 REMARK 465 LEU A 484 REMARK 465 GLU A 485 REMARK 465 VAL A 486 REMARK 465 LEU A 487 REMARK 465 PHE A 488 REMARK 465 GLN A 489 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 730 O HOH A 829 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 155 -122.89 49.56 REMARK 500 SER A 226 0.37 -66.95 REMARK 500 ALA A 368 -128.58 -176.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 602 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 235 O REMARK 620 2 ASP A 235 OD1 70.3 REMARK 620 3 ASP A 237 O 98.8 98.8 REMARK 620 4 HIS A 239 O 172.3 103.0 85.9 REMARK 620 5 SER A 258 OG 85.6 109.0 151.6 93.2 REMARK 620 6 MET A 259 O 76.2 141.2 67.0 111.3 87.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 237 OD1 REMARK 620 2 ASP A 237 OD2 55.1 REMARK 620 3 HIS A 239 ND1 96.1 149.3 REMARK 620 4 ASP A 328 OD2 104.7 87.8 90.4 REMARK 620 5 GOK A 604 O4 88.9 87.7 103.4 159.7 REMARK 620 6 GOK A 604 N1 117.4 114.1 87.0 137.9 31.4 REMARK 620 7 GOK A 604 O3 167.5 117.0 93.2 83.6 80.8 54.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 603 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 248 O REMARK 620 2 ASP A 251 O 80.9 REMARK 620 3 VAL A 254 O 118.7 86.6 REMARK 620 4 PHE A 284 O 151.7 116.5 86.0 REMARK 620 5 HOH A 728 O 79.9 85.5 158.3 79.5 REMARK 620 6 HOH A 856 O 66.6 147.3 111.9 92.4 85.0 REMARK 620 N 1 2 3 4 5 DBREF 7Q1B A 3 489 PDB 7Q1B 7Q1B 3 489 SEQRES 1 A 467 MET THR ASP ALA VAL ALA GLY LYS THR SER LEU PRO PRO SEQRES 2 A 467 PRO VAL ALA ILE ILE VAL GLY HIS ASN ILE ASP ALA SER SEQRES 3 A 467 ALA MET PRO LEU THR TYR GLU ARG ASN ARG PHE VAL ILE SEQRES 4 A 467 ASP MET LEU GLN HIS TYR ALA CYS PRO VAL PHE SER HIS SEQRES 5 A 467 LYS LYS SER GLY ASP ALA MET ASN THR VAL SER SER ASP SEQRES 6 A 467 VAL PHE GLU TRP VAL LEU GLU PRO PHE PRO VAL VAL GLY SEQRES 7 A 467 VAL GLU ASP MET THR ALA PHE HIS ASP ARG ALA TYR LEU SEQRES 8 A 467 ASN TYR LEU SER ILE ARG GLU ALA LEU SER GLU VAL ASP SEQRES 9 A 467 GLU ARG ALA SER THR VAL LYS PRO PRO LEU ARG VAL LEU SEQRES 10 A 467 PRO ASP LEU VAL PRO ILE PRO ALA ASP GLU GLU TYR GLY SEQRES 11 A 467 LEU VAL ASN GLU ASN MET PRO PHE VAL GLY MET TRP ARG SEQRES 12 A 467 THR ILE GLN ALA THR VAL SER GLY THR LEU LEU ALA ALA SEQRES 13 A 467 ARG LEU LEU ALA GLN PRO GLY ARG PHE ALA ALA ILE HIS SEQRES 14 A 467 TRP PHE GLY GLY ARG HIS HIS ALA LYS LYS SER THR ALA SEQRES 15 A 467 GLY GLY PHE CYS PHE ALA ASN ASP VAL VAL LEU GLY VAL SEQRES 16 A 467 LEU GLU LEU LYS LYS LEU LEU SER SER ASP LYS ASN GLY SEQRES 17 A 467 ILE LEU VAL VAL ASP VAL ASP ALA HIS HIS GLY ASP GLY SEQRES 18 A 467 THR GLN SER ALA PHE LEU HIS ASP ASN SER VAL LEU THR SEQRES 19 A 467 LEU SER MET HIS ALA HIS GLY VAL GLY ILE PHE PRO GLY SEQRES 20 A 467 THR GLY GLY ILE GLU GLU ILE GLY ALA GLY LEU GLY ARG SEQRES 21 A 467 GLY PHE THR MET ASN VAL PRO LEU PRO GLU GLY ALA THR SEQRES 22 A 467 ASP ILE LEU ALA VAL THR LEU MET TYR ARG SER ILE HIS SEQRES 23 A 467 PHE ALA PHE LYS LYS LEU GLY GLU GLY LEU ALA ALA ILE SEQRES 24 A 467 VAL ILE VAL CYS GLY SER ASP ALA LEU SER GLY ASP PRO SEQRES 25 A 467 LEU GLY ALA LEU ASN LEU THR VAL GLY GLY MET GLN SER SEQRES 26 A 467 ILE ILE ARG LEU LEU LEU LYS GLU ALA ALA ARG ARG SER SEQRES 27 A 467 LEU LYS VAL LEU LEU LEU GLY ALA GLY GLY TYR VAL ASP SEQRES 28 A 467 THR SER CYS ALA ARG LEU ALA GLY VAL VAL THR LYS ASP SEQRES 29 A 467 VAL LEU SER CYS ALA ALA ALA MET ARG LEU GLY LYS THR SEQRES 30 A 467 GLU TYR PHE GLY ASP SER ALA ASN LEU GLY ASP ASN LEU SEQRES 31 A 467 GLY VAL ALA VAL PRO GLU GLY CYS GLU TYR PHE THR ARG SEQRES 32 A 467 TYR GLY PRO SER PHE LEU MET HIS GLY LEU PRO PRO ALA SEQRES 33 A 467 ARG VAL SER LYS LEU TYR ARG LEU PRO TYR GLY SER PRO SEQRES 34 A 467 LEU PHE MET ARG MET GLN ARG ALA ALA THR LYS GLU ALA SEQRES 35 A 467 LEU ARG ARG ARG LEU ASN GLN GLU GLN ASP GLU GLU GLU SEQRES 36 A 467 ASP ALA GLU ASP SER GLY LEU GLU VAL LEU PHE GLN HET ZN A 601 1 HET K A 602 1 HET K A 603 1 HET GOK A 604 29 HET GOL A 605 6 HETNAM ZN ZINC ION HETNAM K POTASSIUM ION HETNAM GOK 2-[4-[[(1-METHYLINDOL-3-YL) HETNAM 2 GOK METHYLAMINO]METHYL]PIPERIDIN-1-YL]-~{N}-OXIDANYL- HETNAM 3 GOK PYRIMIDINE-5-CARBOXAMIDE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 K 2(K 1+) FORMUL 5 GOK C21 H26 N6 O2 FORMUL 6 GOL C3 H8 O3 FORMUL 7 HOH *226(H2 O) HELIX 1 AA1 MET A 30 TYR A 34 5 5 HELIX 2 AA2 GLU A 35 TYR A 47 1 13 HELIX 3 AA3 CYS A 49 SER A 53 5 5 HELIX 4 AA4 GLY A 80 MET A 84 5 5 HELIX 5 AA5 ASP A 89 ARG A 99 1 11 HELIX 6 AA6 GLU A 100 LEU A 102 5 3 HELIX 7 AA7 ILE A 145 GLY A 152 5 8 HELIX 8 AA8 VAL A 154 MET A 158 5 5 HELIX 9 AA9 GLY A 162 ALA A 182 1 21 HELIX 10 AB1 ASN A 211 LEU A 224 1 14 HELIX 11 AB2 GLY A 241 PHE A 248 1 8 HELIX 12 AB3 ALA A 278 ARG A 282 5 5 HELIX 13 AB4 THR A 295 GLY A 315 1 21 HELIX 14 AB5 GLY A 326 LEU A 330 5 5 HELIX 15 AB6 THR A 341 ARG A 359 1 19 HELIX 16 AB7 VAL A 372 LEU A 396 1 25 HELIX 17 AB8 TYR A 422 GLY A 427 5 6 SHEET 1 AA1 8 PHE A 69 VAL A 72 0 SHEET 2 AA1 8 VAL A 17 ILE A 20 1 N ILE A 19 O GLU A 70 SHEET 3 AA1 8 ALA A 188 HIS A 191 1 O ILE A 190 N ILE A 20 SHEET 4 AA1 8 LYS A 362 LEU A 366 1 O LEU A 365 N HIS A 191 SHEET 5 AA1 8 LEU A 318 VAL A 324 1 N ILE A 323 O LEU A 366 SHEET 6 AA1 8 GLY A 230 ASP A 235 1 N LEU A 232 O VAL A 322 SHEET 7 AA1 8 VAL A 254 ALA A 261 1 O LEU A 257 N VAL A 233 SHEET 8 AA1 8 THR A 285 LEU A 290 1 O LEU A 290 N HIS A 260 LINK O ASP A 235 K K A 602 1555 1555 2.94 LINK OD1 ASP A 235 K K A 602 1555 1555 2.71 LINK OD1 ASP A 237 ZN ZN A 601 1555 1555 2.14 LINK OD2 ASP A 237 ZN ZN A 601 1555 1555 2.53 LINK O ASP A 237 K K A 602 1555 1555 2.59 LINK ND1 HIS A 239 ZN ZN A 601 1555 1555 2.27 LINK O HIS A 239 K K A 602 1555 1555 2.61 LINK O PHE A 248 K K A 603 1555 1555 2.63 LINK O ASP A 251 K K A 603 1555 1555 2.79 LINK O VAL A 254 K K A 603 1555 1555 2.59 LINK OG SER A 258 K K A 602 1555 1555 2.88 LINK O MET A 259 K K A 602 1555 1555 2.55 LINK O PHE A 284 K K A 603 1555 1555 2.85 LINK OD2 ASP A 328 ZN ZN A 601 1555 1555 2.11 LINK ZN ZN A 601 O4 GOK A 604 1555 1555 2.08 LINK ZN ZN A 601 N1 GOK A 604 1555 1555 2.65 LINK ZN ZN A 601 O3 GOK A 604 1555 1555 2.17 LINK K K A 603 O HOH A 728 1555 1555 2.72 LINK K K A 603 O HOH A 856 1555 1555 2.79 CISPEP 1 GLU A 74 PRO A 75 0 -10.50 CISPEP 2 PHE A 267 PRO A 268 0 0.40 CISPEP 3 GLY A 427 PRO A 428 0 5.95 CRYST1 82.167 93.584 119.462 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012170 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010686 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008371 0.00000