HEADER TRANSCRIPTION 09-NOV-21 7Q7S TITLE CRYSTAL STRUCTURE OF HUMAN BCL6 BTB DOMAIN IN COMPLEX WITH COMPOUND 4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: B-CELL LYMPHOMA 6 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BCL-6,B-CELL LYMPHOMA 5 PROTEIN,BCL-5,PROTEIN LAZ-3,ZINC COMPND 5 FINGER AND BTB DOMAIN-CONTAINING PROTEIN 27,ZINC FINGER PROTEIN 51; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ALA-TRP-VAL-ILE-PRO-ALA; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL6, BCL5, LAZ3, ZBTB27, ZNF51; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: AI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET48B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS TRANSCRIPTION, INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR G.W.COLLIE,Y.-V.LE BIHAN,R.L.M.VAN MONTFORT REVDAT 3 31-JAN-24 7Q7S 1 REMARK REVDAT 2 06-JUL-22 7Q7S 1 JRNL REVDAT 1 15-JUN-22 7Q7S 0 JRNL AUTH O.A.DAVIS,K.J.CHEUNG,A.BRENNAN,M.G.LLOYD,M.J.RODRIGUES, JRNL AUTH 2 O.A.PIERRAT,G.W.COLLIE,Y.V.LE BIHAN,R.HUCKVALE,A.C.HARNDEN, JRNL AUTH 3 A.VARELA,M.D.BRIGHT,P.EVE,A.HAYES,A.T.HENLEY,M.D.CARTER, JRNL AUTH 4 P.C.MCANDREW,R.TALBOT,R.BURKE,R.L.M.VAN MONTFORT, JRNL AUTH 5 F.I.RAYNAUD,O.W.ROSSANESE,M.MENICONI,B.R.BELLENIE,S.HOELDER JRNL TITL OPTIMIZING SHAPE COMPLEMENTARITY ENABLES THE DISCOVERY OF JRNL TITL 2 POTENT TRICYCLIC BCL6 INHIBITORS. JRNL REF J.MED.CHEM. V. 65 8169 2022 JRNL REFN ISSN 0022-2623 JRNL PMID 35657291 JRNL DOI 10.1021/ACS.JMEDCHEM.1C02174 REMARK 2 REMARK 2 RESOLUTION. 1.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 (24-FEB-2021) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 40658 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1997 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 51 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.44 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.45 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.88 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 814 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3035 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 787 REMARK 3 BIN R VALUE (WORKING SET) : 0.3007 REMARK 3 BIN FREE R VALUE : 0.3897 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.32 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 27 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1022 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 207 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.17600 REMARK 3 B22 (A**2) : -1.17600 REMARK 3 B33 (A**2) : 2.35200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.190 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.059 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.059 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.053 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.053 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 1217 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 1660 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 443 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 233 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 1217 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 162 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 16 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 1412 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.93 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.47 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 13.44 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|5 - 27} REMARK 3 ORIGIN FOR THE GROUP (A): 28.9479 -27.3855 12.4199 REMARK 3 T TENSOR REMARK 3 T11: 0.0000 T22: 0.0223 REMARK 3 T33: -0.0291 T12: -0.0266 REMARK 3 T13: -0.0014 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 2.4690 L22: 0.5398 REMARK 3 L33: 3.4868 L12: 0.6764 REMARK 3 L13: 2.5268 L23: 1.3412 REMARK 3 S TENSOR REMARK 3 S11: -0.0334 S12: -0.0310 S13: 0.0255 REMARK 3 S21: 0.0898 S22: -0.0311 S23: 0.0019 REMARK 3 S31: 0.0928 S32: -0.1460 S33: 0.0645 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|28 - 33} REMARK 3 ORIGIN FOR THE GROUP (A): 43.2585 -21.4270 19.7567 REMARK 3 T TENSOR REMARK 3 T11: -0.0306 T22: 0.0277 REMARK 3 T33: -0.0042 T12: -0.0011 REMARK 3 T13: -0.0192 T23: -0.0410 REMARK 3 L TENSOR REMARK 3 L11: 0.2574 L22: 8.5226 REMARK 3 L33: 3.3952 L12: -2.1467 REMARK 3 L13: -0.3367 L23: -0.2931 REMARK 3 S TENSOR REMARK 3 S11: 0.0471 S12: -0.0226 S13: 0.0869 REMARK 3 S21: -0.1230 S22: 0.0829 S23: -0.4885 REMARK 3 S31: 0.1094 S32: 0.1208 S33: -0.1300 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|34 - 46} REMARK 3 ORIGIN FOR THE GROUP (A): 39.6440 -12.8355 31.2466 REMARK 3 T TENSOR REMARK 3 T11: 0.0419 T22: 0.0079 REMARK 3 T33: -0.0112 T12: -0.0089 REMARK 3 T13: -0.0191 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 0.4315 L22: 2.9378 REMARK 3 L33: 4.4986 L12: -1.0947 REMARK 3 L13: 1.1335 L23: 2.0312 REMARK 3 S TENSOR REMARK 3 S11: -0.0779 S12: -0.0224 S13: 0.0133 REMARK 3 S21: 0.3459 S22: 0.1805 S23: -0.2279 REMARK 3 S31: 0.1227 S32: 0.0145 S33: -0.1026 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {A|47 - 68} REMARK 3 ORIGIN FOR THE GROUP (A): 33.8971 -6.8399 17.8750 REMARK 3 T TENSOR REMARK 3 T11: 0.0378 T22: -0.0165 REMARK 3 T33: -0.0172 T12: -0.0097 REMARK 3 T13: 0.0158 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.9732 L22: 1.3829 REMARK 3 L33: 0.9763 L12: 1.0496 REMARK 3 L13: -0.3883 L23: 0.6898 REMARK 3 S TENSOR REMARK 3 S11: 0.0421 S12: 0.0621 S13: -0.0375 REMARK 3 S21: -0.1351 S22: 0.0088 S23: 0.0375 REMARK 3 S31: -0.1324 S32: -0.0153 S33: -0.0510 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {A|69 - 79} REMARK 3 ORIGIN FOR THE GROUP (A): 35.5887 -6.0583 31.1535 REMARK 3 T TENSOR REMARK 3 T11: 0.0500 T22: -0.0343 REMARK 3 T33: -0.0193 T12: -0.0369 REMARK 3 T13: 0.0224 T23: -0.0309 REMARK 3 L TENSOR REMARK 3 L11: 0.2625 L22: 0.7602 REMARK 3 L33: 3.6674 L12: 0.0711 REMARK 3 L13: -1.1520 L23: -0.5069 REMARK 3 S TENSOR REMARK 3 S11: 0.1532 S12: 0.0119 S13: 0.0341 REMARK 3 S21: 0.1734 S22: -0.0376 S23: -0.1376 REMARK 3 S31: -0.1951 S32: -0.0140 S33: -0.1156 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {A|80 - 92} REMARK 3 ORIGIN FOR THE GROUP (A): 29.5927 -18.4084 28.4278 REMARK 3 T TENSOR REMARK 3 T11: 0.0212 T22: 0.0073 REMARK 3 T33: -0.0122 T12: -0.0337 REMARK 3 T13: 0.0058 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: -0.2052 L22: 1.4371 REMARK 3 L33: 1.6765 L12: 0.3060 REMARK 3 L13: -0.1472 L23: 1.4874 REMARK 3 S TENSOR REMARK 3 S11: 0.0439 S12: -0.0207 S13: -0.0652 REMARK 3 S21: 0.1163 S22: -0.0516 S23: -0.0317 REMARK 3 S31: 0.0510 S32: 0.0167 S33: 0.0077 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: {A|93 - 101} REMARK 3 ORIGIN FOR THE GROUP (A): 22.1011 -22.4071 32.7802 REMARK 3 T TENSOR REMARK 3 T11: 0.0266 T22: 0.0184 REMARK 3 T33: -0.0367 T12: -0.0565 REMARK 3 T13: 0.0334 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 0.6213 L22: 1.5090 REMARK 3 L33: 5.5605 L12: 0.3488 REMARK 3 L13: -1.9864 L23: 0.6992 REMARK 3 S TENSOR REMARK 3 S11: -0.0151 S12: -0.0211 S13: -0.0779 REMARK 3 S21: 0.1607 S22: -0.1355 S23: 0.1033 REMARK 3 S31: 0.3096 S32: 0.1524 S33: 0.1506 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: {A|102 - 114} REMARK 3 ORIGIN FOR THE GROUP (A): 23.3650 -10.1538 30.7611 REMARK 3 T TENSOR REMARK 3 T11: 0.0140 T22: 0.0031 REMARK 3 T33: -0.0063 T12: -0.0336 REMARK 3 T13: 0.0388 T23: -0.0373 REMARK 3 L TENSOR REMARK 3 L11: 1.6195 L22: 1.3887 REMARK 3 L33: 0.6181 L12: 1.1415 REMARK 3 L13: -0.6148 L23: -1.1909 REMARK 3 S TENSOR REMARK 3 S11: 0.1323 S12: -0.0297 S13: 0.1630 REMARK 3 S21: 0.1223 S22: -0.1257 S23: 0.1026 REMARK 3 S31: -0.0981 S32: -0.0762 S33: -0.0066 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: {A|115 - 129} REMARK 3 ORIGIN FOR THE GROUP (A): 13.8833 -14.4389 30.7441 REMARK 3 T TENSOR REMARK 3 T11: -0.0281 T22: 0.0429 REMARK 3 T33: -0.0012 T12: -0.0351 REMARK 3 T13: 0.0578 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 3.7836 L22: 3.9142 REMARK 3 L33: 0.0000 L12: 3.4723 REMARK 3 L13: -2.5948 L23: -1.3265 REMARK 3 S TENSOR REMARK 3 S11: -0.0760 S12: 0.4707 S13: 0.3731 REMARK 3 S21: 0.2651 S22: 0.1415 S23: 0.2538 REMARK 3 S31: 0.0995 S32: -0.1509 S33: -0.0655 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: {B|0 - 5} REMARK 3 ORIGIN FOR THE GROUP (A): 19.2454 -31.3679 2.4024 REMARK 3 T TENSOR REMARK 3 T11: -0.0378 T22: 0.0386 REMARK 3 T33: -0.0114 T12: -0.0169 REMARK 3 T13: 0.0025 T23: -0.0270 REMARK 3 L TENSOR REMARK 3 L11: 5.0734 L22: 0.0410 REMARK 3 L33: 2.1658 L12: 1.2395 REMARK 3 L13: 2.8446 L23: 0.8938 REMARK 3 S TENSOR REMARK 3 S11: 0.2572 S12: -0.0107 S13: -0.1647 REMARK 3 S21: -0.1356 S22: -0.0653 S23: 0.1171 REMARK 3 S31: 0.0730 S32: 0.0142 S33: -0.1919 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7Q7S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1292119138. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9660 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40751 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.440 REMARK 200 RESOLUTION RANGE LOW (A) : 47.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : 0.12200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : 2.19400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3BIM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 MICROLITER OF THE BCL6-BTB/WVIP REMARK 280 COMPLEX AT 4 MG/ML PLUS 1 MICROLITER OF A CRYSTALLISATION REMARK 280 SOLUTION CONSISTING OF 1 M K2HPO4, 0.7 M NAH2PO4, 75 MM SODIUM REMARK 280 ACETATE BUFFER PH 4.5 AND 2 % DMSO, AGAINST 350 MICROLITER OF REMARK 280 CRYSTALLISATION SOLUTION., PH 7, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.04733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 110.09467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 82.57100 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 137.61833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.52367 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.04733 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 110.09467 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 137.61833 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 82.57100 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 27.52367 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 33.60000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -58.19691 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 27.52367 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 356 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 419 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 2 REMARK 465 PRO A 3 REMARK 465 GLY A 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 6 OD2 REMARK 470 ARG A 13 NE CZ NH1 NH2 REMARK 470 GLN A 64 OE1 REMARK 470 GLU A 115 CD OE1 OE2 REMARK 470 ASP A 119 OD2 REMARK 470 LYS A 123 CE NZ REMARK 470 LYS A 126 CD CE NZ REMARK 470 ALA B 0 N CB REMARK 470 ALA B 5 CA C O CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 31 18.75 59.61 REMARK 500 SER A 39 -121.52 61.75 REMARK 500 SER A 93 -1.74 76.44 REMARK 500 REMARK 500 REMARK: NULL DBREF 7Q7S A 5 129 UNP P41182 BCL6_HUMAN 5 129 DBREF 7Q7S B 0 5 PDB 7Q7S 7Q7S 0 5 SEQADV 7Q7S GLY A 2 UNP P41182 EXPRESSION TAG SEQADV 7Q7S PRO A 3 UNP P41182 EXPRESSION TAG SEQADV 7Q7S GLY A 4 UNP P41182 EXPRESSION TAG SEQRES 1 A 128 GLY PRO GLY ALA ASP SER CYS ILE GLN PHE THR ARG HIS SEQRES 2 A 128 ALA SER ASP VAL LEU LEU ASN LEU ASN ARG LEU ARG SER SEQRES 3 A 128 ARG ASP ILE LEU THR ASP VAL VAL ILE VAL VAL SER ARG SEQRES 4 A 128 GLU GLN PHE ARG ALA HIS LYS THR VAL LEU MET ALA CYS SEQRES 5 A 128 SER GLY LEU PHE TYR SER ILE PHE THR ASP GLN LEU LYS SEQRES 6 A 128 CYS ASN LEU SER VAL ILE ASN LEU ASP PRO GLU ILE ASN SEQRES 7 A 128 PRO GLU GLY PHE CYS ILE LEU LEU ASP PHE MET TYR THR SEQRES 8 A 128 SER ARG LEU ASN LEU ARG GLU GLY ASN ILE MET ALA VAL SEQRES 9 A 128 MET ALA THR ALA MET TYR LEU GLN MET GLU HIS VAL VAL SEQRES 10 A 128 ASP THR CYS ARG LYS PHE ILE LYS ALA SER GLU SEQRES 1 B 6 ALA TRP VAL ILE PRO ALA HET 97S A 201 26 HET EDO A 202 4 HET EDO A 203 4 HET EDO A 204 4 HET EDO A 205 4 HET EDO A 206 4 HET CL A 207 1 HET CL A 208 1 HETNAM 97S 2-CHLORANYL-4-[[4-(ETHYLAMINO)-1,3-DIMETHYL-2- HETNAM 2 97S OXIDANYLIDENE-QUINOLIN-6-YL]AMINO]PYRIDINE-3- HETNAM 3 97S CARBONITRILE HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 97S C19 H18 CL N5 O FORMUL 4 EDO 5(C2 H6 O2) FORMUL 9 CL 2(CL 1-) FORMUL 11 HOH *207(H2 O) HELIX 1 AA1 ARG A 13 ARG A 28 1 16 HELIX 2 AA2 HIS A 46 SER A 54 1 9 HELIX 3 AA3 SER A 54 ASP A 63 1 10 HELIX 4 AA4 LEU A 65 LEU A 69 5 5 HELIX 5 AA5 ASN A 79 SER A 93 1 15 HELIX 6 AA6 ASN A 101 GLN A 113 1 13 HELIX 7 AA7 MET A 114 SER A 128 1 15 SHEET 1 AA1 2 GLN A 10 PHE A 11 0 SHEET 2 AA1 2 TRP B 1 VAL B 2 -1 O VAL B 2 N GLN A 10 SHEET 1 AA2 3 GLU A 41 ALA A 45 0 SHEET 2 AA2 3 VAL A 34 VAL A 38 -1 N ILE A 36 O PHE A 43 SHEET 3 AA2 3 VAL A 71 ASN A 73 1 O ILE A 72 N VAL A 37 CRYST1 67.200 67.200 165.142 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014881 0.008592 0.000000 0.00000 SCALE2 0.000000 0.017183 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006055 0.00000