data_7QBY # _entry.id 7QBY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.358 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7QBY pdb_00007qby 10.2210/pdb7qby/pdb WWPDB D_1292119330 ? ? BMRB 34686 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Structure containing both JD and CTD' 6U3S re-refinement PDB 'Structure containing both JD and CTD' 6U3R re-refinement PDB 'Structure of WT CTD' 7JSQ re-refinement BMRB ;Refined structure of the T193A mutant in the C-terminal domain of DNAJB6b. BMRB ID 30656 relates to the wild type sequence (w/ different numbering) and was also used to derive assignments. ; 34686 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7QBY _pdbx_database_status.recvd_initial_deposition_date 2021-11-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Karamanos, T.K.' 1 0000-0003-2297-540X 'Cawood, E.E.' 2 0000-0002-2707-8022 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_id_ASTM ACIEAY _citation.journal_id_CSD 0179 _citation.journal_id_ISSN 1521-3773 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 61 _citation.language ? _citation.page_first e202116403 _citation.page_last e202116403 _citation.title 'Microsecond Backbone Motions Modulate the Oligomerization of the DNAJB6 Chaperone.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/anie.202116403 _citation.pdbx_database_id_PubMed 35247211 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cawood, E.E.' 1 0000-0002-2707-8022 primary 'Clore, G.M.' 2 0000-0003-3809-1027 primary 'Karamanos, T.K.' 3 0000-0003-2297-540X # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Isoform B of DnaJ homolog subfamily B member 6' _entity.formula_weight 6444.378 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'The C terminal domain of DNAJB6b including the T193A mutation' # _entity_name_com.entity_id 1 _entity_name_com.name 'HHDJ1,Heat shock protein J2,HSJ-2,MRJ,MSJ-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MGNFKSISASTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGKEQLLRLDNK _entity_poly.pdbx_seq_one_letter_code_can MGNFKSISASTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGKEQLLRLDNK _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 ASN n 1 4 PHE n 1 5 LYS n 1 6 SER n 1 7 ILE n 1 8 SER n 1 9 ALA n 1 10 SER n 1 11 THR n 1 12 LYS n 1 13 MET n 1 14 VAL n 1 15 ASN n 1 16 GLY n 1 17 ARG n 1 18 LYS n 1 19 ILE n 1 20 THR n 1 21 THR n 1 22 LYS n 1 23 ARG n 1 24 ILE n 1 25 VAL n 1 26 GLU n 1 27 ASN n 1 28 GLY n 1 29 GLN n 1 30 GLU n 1 31 ARG n 1 32 VAL n 1 33 GLU n 1 34 VAL n 1 35 GLU n 1 36 GLU n 1 37 ASP n 1 38 GLY n 1 39 GLN n 1 40 LEU n 1 41 LYS n 1 42 SER n 1 43 LEU n 1 44 THR n 1 45 ILE n 1 46 ASN n 1 47 GLY n 1 48 LYS n 1 49 GLU n 1 50 GLN n 1 51 LEU n 1 52 LEU n 1 53 ARG n 1 54 LEU n 1 55 ASP n 1 56 ASN n 1 57 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 57 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DNAJB6, HSJ2, MRJ, MSJ1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DNJB6_HUMAN _struct_ref.pdbx_db_accession O75190 _struct_ref.pdbx_db_isoform O75190-2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MGNFKSISTSTKMVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGKEQLLRLDNK _struct_ref.pdbx_align_begin 185 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7QBY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 57 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O75190 _struct_ref_seq.db_align_beg 185 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 241 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 185 _struct_ref_seq.pdbx_auth_seq_align_end 241 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 7QBY _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 9 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code O75190 _struct_ref_seq_dif.db_mon_id THR _struct_ref_seq_dif.pdbx_seq_db_seq_num 193 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 193 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '3D 1H-13C NOESY HCH' 1 isotropic 2 1 1 '3D 1H-13C NOESY CCH' 1 isotropic 3 1 1 'JHNHA ARTSY' 1 isotropic 4 1 1 '3D HNCACB' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 288 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.7 _pdbx_nmr_exptl_sample_conditions.ionic_strength 87 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label condition_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents ;0.2 mM [U-13C; U-15N] DNAJ HOMOLOG SUBFAMILY B MEMBER 6 C-TERMINAL DOMAIN, 20 mM sodium phosphate, 150 mM sodium chloride, 0.02 % v/v sodium azide, 95% H2O/5% D2O ; _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' _pdbx_nmr_sample_details.label 13C15N_sample _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AVANCE III' _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 7QBY _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 7QBY _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7QBY _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' 2 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 3 'chemical shift assignment' 'CcpNmr Analysis' ? CCPN # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7QBY _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7QBY _struct.title 'Refined structure of the T193A mutant in the C-terminal domain of DNAJB6b' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7QBY _struct_keywords.text 'Hsp40 chaperone, anti-aggregation, CHAPERONE' _struct_keywords.pdbx_keywords CHAPERONE # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 6 ? VAL A 14 ? SER A 190 VAL A 198 AA1 2 ARG A 17 ? VAL A 25 ? ARG A 201 VAL A 209 AA1 3 GLU A 30 ? GLU A 36 ? GLU A 214 GLU A 220 AA1 4 GLN A 39 ? ILE A 45 ? GLN A 223 ILE A 229 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 12 ? N LYS A 196 O ILE A 19 ? O ILE A 203 AA1 2 3 N ILE A 24 ? N ILE A 208 O ARG A 31 ? O ARG A 215 AA1 3 4 N VAL A 32 ? N VAL A 216 O THR A 44 ? O THR A 228 # _atom_sites.entry_id 7QBY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 185 ? ? ? A . n A 1 2 GLY 2 186 ? ? ? A . n A 1 3 ASN 3 187 ? ? ? A . n A 1 4 PHE 4 188 188 PHE PHE A . n A 1 5 LYS 5 189 189 LYS LYS A . n A 1 6 SER 6 190 190 SER SER A . n A 1 7 ILE 7 191 191 ILE ILE A . n A 1 8 SER 8 192 192 SER SER A . n A 1 9 ALA 9 193 193 ALA ALA A . n A 1 10 SER 10 194 194 SER SER A . n A 1 11 THR 11 195 195 THR THR A . n A 1 12 LYS 12 196 196 LYS LYS A . n A 1 13 MET 13 197 197 MET MET A . n A 1 14 VAL 14 198 198 VAL VAL A . n A 1 15 ASN 15 199 199 ASN ASN A . n A 1 16 GLY 16 200 200 GLY GLY A . n A 1 17 ARG 17 201 201 ARG ARG A . n A 1 18 LYS 18 202 202 LYS LYS A . n A 1 19 ILE 19 203 203 ILE ILE A . n A 1 20 THR 20 204 204 THR THR A . n A 1 21 THR 21 205 205 THR THR A . n A 1 22 LYS 22 206 206 LYS LYS A . n A 1 23 ARG 23 207 207 ARG ARG A . n A 1 24 ILE 24 208 208 ILE ILE A . n A 1 25 VAL 25 209 209 VAL VAL A . n A 1 26 GLU 26 210 210 GLU GLU A . n A 1 27 ASN 27 211 211 ASN ASN A . n A 1 28 GLY 28 212 212 GLY GLY A . n A 1 29 GLN 29 213 213 GLN GLN A . n A 1 30 GLU 30 214 214 GLU GLU A . n A 1 31 ARG 31 215 215 ARG ARG A . n A 1 32 VAL 32 216 216 VAL VAL A . n A 1 33 GLU 33 217 217 GLU GLU A . n A 1 34 VAL 34 218 218 VAL VAL A . n A 1 35 GLU 35 219 219 GLU GLU A . n A 1 36 GLU 36 220 220 GLU GLU A . n A 1 37 ASP 37 221 221 ASP ASP A . n A 1 38 GLY 38 222 222 GLY GLY A . n A 1 39 GLN 39 223 223 GLN GLN A . n A 1 40 LEU 40 224 224 LEU LEU A . n A 1 41 LYS 41 225 225 LYS LYS A . n A 1 42 SER 42 226 226 SER SER A . n A 1 43 LEU 43 227 227 LEU LEU A . n A 1 44 THR 44 228 228 THR THR A . n A 1 45 ILE 45 229 229 ILE ILE A . n A 1 46 ASN 46 230 230 ASN ASN A . n A 1 47 GLY 47 231 231 GLY GLY A . n A 1 48 LYS 48 232 232 LYS LYS A . n A 1 49 GLU 49 233 233 GLU GLU A . n A 1 50 GLN 50 234 234 GLN GLN A . n A 1 51 LEU 51 235 235 LEU LEU A . n A 1 52 LEU 52 236 236 LEU LEU A . n A 1 53 ARG 53 237 237 ARG ARG A . n A 1 54 LEU 54 238 238 LEU LEU A . n A 1 55 ASP 55 239 239 ASP ASP A . n A 1 56 ASN 56 240 240 ASN ASN A . n A 1 57 LYS 57 241 241 LYS LYS A . n # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 t.karamanos@leeds.ac.uk Theodoros Karamanos ? 'principal investigator/group leader' 0000-0003-2297-540X 3 mariusc@mail.nih.gov Marius Clore ? 'principal investigator/group leader' 0000-0003-3809-1027 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-03-30 2 'Structure model' 1 1 2022-05-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_citation.journal_volume' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'DNAJ HOMOLOG SUBFAMILY B MEMBER 6 C-TERMINAL DOMAIN' 0.2 ? mM '[U-13C; U-15N]' 1 'sodium phosphate' 20 ? mM 'natural abundance' 1 'sodium chloride' 150 ? mM 'natural abundance' 1 'sodium azide' 0.02 ? '% v/v' 'natural abundance' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 196 ? ? -160.84 105.79 2 1 LYS A 225 ? ? -146.94 18.43 3 1 LEU A 235 ? ? -152.69 -73.37 4 1 ARG A 237 ? ? -151.51 79.95 5 2 LYS A 196 ? ? -164.46 105.25 6 2 LYS A 225 ? ? -146.29 13.75 7 2 ARG A 237 ? ? -156.97 -49.19 8 2 LEU A 238 ? ? -142.99 -34.68 9 3 LYS A 196 ? ? -161.99 101.01 10 3 ARG A 237 ? ? -153.40 80.43 11 4 LYS A 196 ? ? -163.90 106.26 12 4 LYS A 225 ? ? -141.97 19.91 13 4 ARG A 237 ? ? -157.92 -47.77 14 4 LEU A 238 ? ? -154.87 -39.21 15 5 LYS A 196 ? ? -161.55 108.09 16 5 LYS A 225 ? ? -146.27 18.30 17 5 LEU A 235 ? ? -152.66 -61.88 18 5 LEU A 236 ? ? -154.28 -64.09 19 5 ARG A 237 ? ? -163.32 -55.35 20 5 LEU A 238 ? ? -156.88 -41.98 21 6 LYS A 196 ? ? -161.01 112.88 22 6 LYS A 225 ? ? -151.42 27.76 23 6 ARG A 237 ? ? -156.67 -46.68 24 6 LEU A 238 ? ? -154.55 -38.24 25 7 LYS A 225 ? ? -148.67 25.02 26 7 LEU A 235 ? ? -152.72 -61.95 27 7 ARG A 237 ? ? -159.67 68.69 28 8 LYS A 225 ? ? -151.49 30.27 29 8 ARG A 237 ? ? -151.06 74.65 30 9 LEU A 227 ? ? -160.19 110.86 31 9 ARG A 237 ? ? -159.63 -52.48 32 9 LEU A 238 ? ? -143.14 -37.10 33 10 LYS A 225 ? ? -147.51 22.38 34 10 ARG A 237 ? ? -157.76 -44.78 35 10 LEU A 238 ? ? -153.78 -36.64 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 185 ? A MET 1 2 1 Y 1 A GLY 186 ? A GLY 2 3 1 Y 1 A ASN 187 ? A ASN 3 4 2 Y 1 A MET 185 ? A MET 1 5 2 Y 1 A GLY 186 ? A GLY 2 6 2 Y 1 A ASN 187 ? A ASN 3 7 3 Y 1 A MET 185 ? A MET 1 8 3 Y 1 A GLY 186 ? A GLY 2 9 3 Y 1 A ASN 187 ? A ASN 3 10 4 Y 1 A MET 185 ? A MET 1 11 4 Y 1 A GLY 186 ? A GLY 2 12 4 Y 1 A ASN 187 ? A ASN 3 13 5 Y 1 A MET 185 ? A MET 1 14 5 Y 1 A GLY 186 ? A GLY 2 15 5 Y 1 A ASN 187 ? A ASN 3 16 6 Y 1 A MET 185 ? A MET 1 17 6 Y 1 A GLY 186 ? A GLY 2 18 6 Y 1 A ASN 187 ? A ASN 3 19 7 Y 1 A MET 185 ? A MET 1 20 7 Y 1 A GLY 186 ? A GLY 2 21 7 Y 1 A ASN 187 ? A ASN 3 22 8 Y 1 A MET 185 ? A MET 1 23 8 Y 1 A GLY 186 ? A GLY 2 24 8 Y 1 A ASN 187 ? A ASN 3 25 9 Y 1 A MET 185 ? A MET 1 26 9 Y 1 A GLY 186 ? A GLY 2 27 9 Y 1 A ASN 187 ? A ASN 3 28 10 Y 1 A MET 185 ? A MET 1 29 10 Y 1 A GLY 186 ? A GLY 2 30 10 Y 1 A ASN 187 ? A ASN 3 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Wellcome Trust' 'United States' 223268/Z/21/Z 1 'Other private' 'United States' 1520 2 'National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)' 'United States' DK-029023 3 # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'NMR relaxation study' ? 2 1 'gel filtration' ? #