data_7QDE # _entry.id 7QDE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7QDE pdb_00007qde 10.2210/pdb7qde/pdb WWPDB D_1292119302 ? ? BMRB 34692 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-12-21 2 'Structure model' 1 1 2024-01-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' citation 4 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 7QDE _pdbx_database_status.recvd_initial_deposition_date 2021-11-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'NMR structure of Npl3 RRM12 bound to the AUCCAGUGGAA RNA' _pdbx_database_related.db_id 34692 _pdbx_database_related.content_type unspecified # _pdbx_contact_author.id 3 _pdbx_contact_author.email allain@bc.biol.ethz.ch _pdbx_contact_author.name_first frederic _pdbx_contact_author.name_last allain _pdbx_contact_author.name_mi H.-T. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2131-6237 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Allain, F.H.-T.' 1 ? 'Clery, A.' 2 ? 'Moursy, A.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 7166 _citation.page_last 7166 _citation.title 'RNA recognition by Npl3p reveals U2 snRNA-binding compatible with a chaperone role during splicing.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-023-42962-4 _citation.pdbx_database_id_PubMed 37935663 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Moursy, A.' 1 ? primary 'Clery, A.' 2 0000-0002-4550-6908 primary 'Gerhardy, S.' 3 0000-0003-1826-5907 primary 'Betz, K.M.' 4 0000-0001-5041-6205 primary 'Rao, S.' 5 ? primary 'Mazur, J.' 6 0000-0002-1677-011X primary 'Campagne, S.' 7 ? primary 'Beusch, I.' 8 0000-0001-7758-4348 primary 'Duszczyk, M.M.' 9 ? primary 'Robinson, M.D.' 10 0000-0002-3048-5518 primary 'Panse, V.G.' 11 0000-0002-4770-7068 primary 'Allain, F.H.' 12 0000-0002-2131-6237 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*AP*UP*CP*CP*AP*GP*UP*GP*GP*AP*A)-3') ; 3530.178 1 ? ? ? 'synthetic RNA from horizon' 2 polymer man 'Nucleolar protein 3' 19294.615 1 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Mitochondrial targeting suppressor 1 protein,Nuclear polyadenylated RNA-binding protein 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no AUCCAGUGGAA AUCCAGUGGAA A ? 2 'polypeptide(L)' no no ;MHHRQEGELSNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFANQPLEVVYS KLPAKRYRITMKNLPEGCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIEFRGSVITVERD DNPPPIRRS ; ;MHHRQEGELSNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFANQPLEVVYS KLPAKRYRITMKNLPEGCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIEFRGSVITVERD DNPPPIRRS ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 A n 1 2 U n 1 3 C n 1 4 C n 1 5 A n 1 6 G n 1 7 U n 1 8 G n 1 9 G n 1 10 A n 1 11 A n 2 1 MET n 2 2 HIS n 2 3 HIS n 2 4 ARG n 2 5 GLN n 2 6 GLU n 2 7 GLY n 2 8 GLU n 2 9 LEU n 2 10 SER n 2 11 ASN n 2 12 THR n 2 13 ARG n 2 14 LEU n 2 15 PHE n 2 16 VAL n 2 17 ARG n 2 18 PRO n 2 19 PHE n 2 20 PRO n 2 21 LEU n 2 22 ASP n 2 23 VAL n 2 24 GLN n 2 25 GLU n 2 26 SER n 2 27 GLU n 2 28 LEU n 2 29 ASN n 2 30 GLU n 2 31 ILE n 2 32 PHE n 2 33 GLY n 2 34 PRO n 2 35 PHE n 2 36 GLY n 2 37 PRO n 2 38 MET n 2 39 LYS n 2 40 GLU n 2 41 VAL n 2 42 LYS n 2 43 ILE n 2 44 LEU n 2 45 ASN n 2 46 GLY n 2 47 PHE n 2 48 ALA n 2 49 PHE n 2 50 VAL n 2 51 GLU n 2 52 PHE n 2 53 GLU n 2 54 GLU n 2 55 ALA n 2 56 GLU n 2 57 SER n 2 58 ALA n 2 59 ALA n 2 60 LYS n 2 61 ALA n 2 62 ILE n 2 63 GLU n 2 64 GLU n 2 65 VAL n 2 66 HIS n 2 67 GLY n 2 68 LYS n 2 69 SER n 2 70 PHE n 2 71 ALA n 2 72 ASN n 2 73 GLN n 2 74 PRO n 2 75 LEU n 2 76 GLU n 2 77 VAL n 2 78 VAL n 2 79 TYR n 2 80 SER n 2 81 LYS n 2 82 LEU n 2 83 PRO n 2 84 ALA n 2 85 LYS n 2 86 ARG n 2 87 TYR n 2 88 ARG n 2 89 ILE n 2 90 THR n 2 91 MET n 2 92 LYS n 2 93 ASN n 2 94 LEU n 2 95 PRO n 2 96 GLU n 2 97 GLY n 2 98 CYS n 2 99 SER n 2 100 TRP n 2 101 GLN n 2 102 ASP n 2 103 LEU n 2 104 LYS n 2 105 ASP n 2 106 LEU n 2 107 ALA n 2 108 ARG n 2 109 GLU n 2 110 ASN n 2 111 SER n 2 112 LEU n 2 113 GLU n 2 114 THR n 2 115 THR n 2 116 PHE n 2 117 SER n 2 118 SER n 2 119 VAL n 2 120 ASN n 2 121 THR n 2 122 ARG n 2 123 ASP n 2 124 PHE n 2 125 ASP n 2 126 GLY n 2 127 THR n 2 128 GLY n 2 129 ALA n 2 130 LEU n 2 131 GLU n 2 132 PHE n 2 133 PRO n 2 134 SER n 2 135 GLU n 2 136 GLU n 2 137 ILE n 2 138 LEU n 2 139 VAL n 2 140 GLU n 2 141 ALA n 2 142 LEU n 2 143 GLU n 2 144 ARG n 2 145 LEU n 2 146 ASN n 2 147 ASN n 2 148 ILE n 2 149 GLU n 2 150 PHE n 2 151 ARG n 2 152 GLY n 2 153 SER n 2 154 VAL n 2 155 ILE n 2 156 THR n 2 157 VAL n 2 158 GLU n 2 159 ARG n 2 160 ASP n 2 161 ASP n 2 162 ASN n 2 163 PRO n 2 164 PRO n 2 165 PRO n 2 166 ILE n 2 167 ARG n 2 168 ARG n 2 169 SER n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 169 _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NPL3, MTR13, MTS1, NAB1, NOP3, YDR432W, D9461.19' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae (strain ATCC 204508 / S288c)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'unidentified plasmid' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 45202 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 11 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 A 1 103 103 A A A . n A 1 2 U 2 104 104 U U A . n A 1 3 C 3 105 105 C C A . n A 1 4 C 4 106 106 C C A . n A 1 5 A 5 107 107 A A A . n A 1 6 G 6 108 108 G G A . n A 1 7 U 7 109 109 U U A . n A 1 8 G 8 110 110 G G A . n A 1 9 G 9 111 111 G G A . n A 1 10 A 10 112 112 A A A . n A 1 11 A 11 113 113 A A A . n B 2 1 MET 1 114 114 MET MET B . n B 2 2 HIS 2 115 115 HIS HIS B . n B 2 3 HIS 3 116 116 HIS HIS B . n B 2 4 ARG 4 117 117 ARG ARG B . n B 2 5 GLN 5 118 118 GLN GLN B . n B 2 6 GLU 6 119 119 GLU GLU B . n B 2 7 GLY 7 120 120 GLY GLY B . n B 2 8 GLU 8 121 121 GLU GLU B . n B 2 9 LEU 9 122 122 LEU LEU B . n B 2 10 SER 10 123 123 SER SER B . n B 2 11 ASN 11 124 124 ASN ASN B . n B 2 12 THR 12 125 125 THR THR B . n B 2 13 ARG 13 126 126 ARG ARG B . n B 2 14 LEU 14 127 127 LEU LEU B . n B 2 15 PHE 15 128 128 PHE PHE B . n B 2 16 VAL 16 129 129 VAL VAL B . n B 2 17 ARG 17 130 130 ARG ARG B . n B 2 18 PRO 18 131 131 PRO PRO B . n B 2 19 PHE 19 132 132 PHE PHE B . n B 2 20 PRO 20 133 133 PRO PRO B . n B 2 21 LEU 21 134 134 LEU LEU B . n B 2 22 ASP 22 135 135 ASP ASP B . n B 2 23 VAL 23 136 136 VAL VAL B . n B 2 24 GLN 24 137 137 GLN GLN B . n B 2 25 GLU 25 138 138 GLU GLU B . n B 2 26 SER 26 139 139 SER SER B . n B 2 27 GLU 27 140 140 GLU GLU B . n B 2 28 LEU 28 141 141 LEU LEU B . n B 2 29 ASN 29 142 142 ASN ASN B . n B 2 30 GLU 30 143 143 GLU GLU B . n B 2 31 ILE 31 144 144 ILE ILE B . n B 2 32 PHE 32 145 145 PHE PHE B . n B 2 33 GLY 33 146 146 GLY GLY B . n B 2 34 PRO 34 147 147 PRO PRO B . n B 2 35 PHE 35 148 148 PHE PHE B . n B 2 36 GLY 36 149 149 GLY GLY B . n B 2 37 PRO 37 150 150 PRO PRO B . n B 2 38 MET 38 151 151 MET MET B . n B 2 39 LYS 39 152 152 LYS LYS B . n B 2 40 GLU 40 153 153 GLU GLU B . n B 2 41 VAL 41 154 154 VAL VAL B . n B 2 42 LYS 42 155 155 LYS LYS B . n B 2 43 ILE 43 156 156 ILE ILE B . n B 2 44 LEU 44 157 157 LEU LEU B . n B 2 45 ASN 45 158 158 ASN ASN B . n B 2 46 GLY 46 159 159 GLY GLY B . n B 2 47 PHE 47 160 160 PHE PHE B . n B 2 48 ALA 48 161 161 ALA ALA B . n B 2 49 PHE 49 162 162 PHE PHE B . n B 2 50 VAL 50 163 163 VAL VAL B . n B 2 51 GLU 51 164 164 GLU GLU B . n B 2 52 PHE 52 165 165 PHE PHE B . n B 2 53 GLU 53 166 166 GLU GLU B . n B 2 54 GLU 54 167 167 GLU GLU B . n B 2 55 ALA 55 168 168 ALA ALA B . n B 2 56 GLU 56 169 169 GLU GLU B . n B 2 57 SER 57 170 170 SER SER B . n B 2 58 ALA 58 171 171 ALA ALA B . n B 2 59 ALA 59 172 172 ALA ALA B . n B 2 60 LYS 60 173 173 LYS LYS B . n B 2 61 ALA 61 174 174 ALA ALA B . n B 2 62 ILE 62 175 175 ILE ILE B . n B 2 63 GLU 63 176 176 GLU GLU B . n B 2 64 GLU 64 177 177 GLU GLU B . n B 2 65 VAL 65 178 178 VAL VAL B . n B 2 66 HIS 66 179 179 HIS HIS B . n B 2 67 GLY 67 180 180 GLY GLY B . n B 2 68 LYS 68 181 181 LYS LYS B . n B 2 69 SER 69 182 182 SER SER B . n B 2 70 PHE 70 183 183 PHE PHE B . n B 2 71 ALA 71 184 184 ALA ALA B . n B 2 72 ASN 72 185 185 ASN ASN B . n B 2 73 GLN 73 186 186 GLN GLN B . n B 2 74 PRO 74 187 187 PRO PRO B . n B 2 75 LEU 75 188 188 LEU LEU B . n B 2 76 GLU 76 189 189 GLU GLU B . n B 2 77 VAL 77 190 190 VAL VAL B . n B 2 78 VAL 78 191 191 VAL VAL B . n B 2 79 TYR 79 192 192 TYR TYR B . n B 2 80 SER 80 193 193 SER SER B . n B 2 81 LYS 81 194 194 LYS LYS B . n B 2 82 LEU 82 195 195 LEU LEU B . n B 2 83 PRO 83 196 196 PRO PRO B . n B 2 84 ALA 84 197 197 ALA ALA B . n B 2 85 LYS 85 198 198 LYS LYS B . n B 2 86 ARG 86 199 199 ARG ARG B . n B 2 87 TYR 87 200 200 TYR TYR B . n B 2 88 ARG 88 201 201 ARG ARG B . n B 2 89 ILE 89 202 202 ILE ILE B . n B 2 90 THR 90 203 203 THR THR B . n B 2 91 MET 91 204 204 MET MET B . n B 2 92 LYS 92 205 205 LYS LYS B . n B 2 93 ASN 93 206 206 ASN ASN B . n B 2 94 LEU 94 207 207 LEU LEU B . n B 2 95 PRO 95 208 208 PRO PRO B . n B 2 96 GLU 96 209 209 GLU GLU B . n B 2 97 GLY 97 210 210 GLY GLY B . n B 2 98 CYS 98 211 211 CYS CYS B . n B 2 99 SER 99 212 212 SER SER B . n B 2 100 TRP 100 213 213 TRP TRP B . n B 2 101 GLN 101 214 214 GLN GLN B . n B 2 102 ASP 102 215 215 ASP ASP B . n B 2 103 LEU 103 216 216 LEU LEU B . n B 2 104 LYS 104 217 217 LYS LYS B . n B 2 105 ASP 105 218 218 ASP ASP B . n B 2 106 LEU 106 219 219 LEU LEU B . n B 2 107 ALA 107 220 220 ALA ALA B . n B 2 108 ARG 108 221 221 ARG ARG B . n B 2 109 GLU 109 222 222 GLU GLU B . n B 2 110 ASN 110 223 223 ASN ASN B . n B 2 111 SER 111 224 224 SER SER B . n B 2 112 LEU 112 225 225 LEU LEU B . n B 2 113 GLU 113 226 226 GLU GLU B . n B 2 114 THR 114 227 227 THR THR B . n B 2 115 THR 115 228 228 THR THR B . n B 2 116 PHE 116 229 229 PHE PHE B . n B 2 117 SER 117 230 230 SER SER B . n B 2 118 SER 118 231 231 SER SER B . n B 2 119 VAL 119 232 232 VAL VAL B . n B 2 120 ASN 120 233 233 ASN ASN B . n B 2 121 THR 121 234 234 THR THR B . n B 2 122 ARG 122 235 235 ARG ARG B . n B 2 123 ASP 123 236 236 ASP ASP B . n B 2 124 PHE 124 237 237 PHE PHE B . n B 2 125 ASP 125 238 238 ASP ASP B . n B 2 126 GLY 126 239 239 GLY GLY B . n B 2 127 THR 127 240 240 THR THR B . n B 2 128 GLY 128 241 241 GLY GLY B . n B 2 129 ALA 129 242 242 ALA ALA B . n B 2 130 LEU 130 243 243 LEU LEU B . n B 2 131 GLU 131 244 244 GLU GLU B . n B 2 132 PHE 132 245 245 PHE PHE B . n B 2 133 PRO 133 246 246 PRO PRO B . n B 2 134 SER 134 247 247 SER SER B . n B 2 135 GLU 135 248 248 GLU GLU B . n B 2 136 GLU 136 249 249 GLU GLU B . n B 2 137 ILE 137 250 250 ILE ILE B . n B 2 138 LEU 138 251 251 LEU LEU B . n B 2 139 VAL 139 252 252 VAL VAL B . n B 2 140 GLU 140 253 253 GLU GLU B . n B 2 141 ALA 141 254 254 ALA ALA B . n B 2 142 LEU 142 255 255 LEU LEU B . n B 2 143 GLU 143 256 256 GLU GLU B . n B 2 144 ARG 144 257 257 ARG ARG B . n B 2 145 LEU 145 258 258 LEU LEU B . n B 2 146 ASN 146 259 259 ASN ASN B . n B 2 147 ASN 147 260 260 ASN ASN B . n B 2 148 ILE 148 261 261 ILE ILE B . n B 2 149 GLU 149 262 262 GLU GLU B . n B 2 150 PHE 150 263 263 PHE PHE B . n B 2 151 ARG 151 264 264 ARG ARG B . n B 2 152 GLY 152 265 265 GLY GLY B . n B 2 153 SER 153 266 266 SER SER B . n B 2 154 VAL 154 267 267 VAL VAL B . n B 2 155 ILE 155 268 268 ILE ILE B . n B 2 156 THR 156 269 269 THR THR B . n B 2 157 VAL 157 270 270 VAL VAL B . n B 2 158 GLU 158 271 271 GLU GLU B . n B 2 159 ARG 159 272 272 ARG ARG B . n B 2 160 ASP 160 273 273 ASP ASP B . n B 2 161 ASP 161 274 274 ASP ASP B . n B 2 162 ASN 162 275 275 ASN ASN B . n B 2 163 PRO 163 276 276 PRO PRO B . n B 2 164 PRO 164 277 277 PRO PRO B . n B 2 165 PRO 165 278 278 PRO PRO B . n B 2 166 ILE 166 279 279 ILE ILE B . n B 2 167 ARG 167 280 280 ARG ARG B . n B 2 168 ARG 168 281 281 ARG ARG B . n B 2 169 SER 169 282 282 SER SER B . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7QDE _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 7QDE _struct.title 'NMR structure of Npl3 RRM12 bound to the AUCCAGUGGAA RNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7QDE _struct_keywords.text 'splicing, U2snRNA, RRM, yeast, protein-RNA complex, RNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 7QDE 7QDE ? 1 ? 1 2 UNP NOP3_YEAST Q01560 ? 2 ;MHHRQEGELSNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFANQPLEVVYS KLPAKRYRITMKNLPEGCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIEFRGSVITVERD DNPPPIRRS ; 114 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7QDE A 1 ? 11 ? 7QDE 103 ? 113 ? 103 113 2 2 7QDE B 1 ? 169 ? Q01560 114 ? 282 ? 114 282 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2450 ? 1 MORE -12 ? 1 'SSA (A^2)' 10980 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'NMR Distance Restraints' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLU B 27 ? PHE B 32 ? GLU B 140 PHE B 145 1 ? 6 HELX_P HELX_P2 AA2 GLU B 54 ? HIS B 66 ? GLU B 167 HIS B 179 1 ? 13 HELX_P HELX_P3 AA3 SER B 99 ? GLU B 109 ? SER B 212 GLU B 222 1 ? 11 HELX_P HELX_P4 AA4 SER B 134 ? LEU B 145 ? SER B 247 LEU B 258 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU B 40 ? LEU B 44 ? GLU B 153 LEU B 157 AA1 2 PHE B 47 ? GLU B 51 ? PHE B 160 GLU B 164 AA1 3 LEU B 14 ? VAL B 16 ? LEU B 127 VAL B 129 AA1 4 VAL B 78 ? TYR B 79 ? VAL B 191 TYR B 192 AA2 1 TYR B 87 ? MET B 91 ? TYR B 200 MET B 204 AA2 2 GLY B 128 ? PHE B 132 ? GLY B 241 PHE B 245 AA2 3 PHE B 116 ? SER B 118 ? PHE B 229 SER B 231 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU B 44 ? N LEU B 157 O PHE B 47 ? O PHE B 160 AA1 2 3 O VAL B 50 ? O VAL B 163 N LEU B 14 ? N LEU B 127 AA1 3 4 N PHE B 15 ? N PHE B 128 O VAL B 78 ? O VAL B 191 AA2 1 2 N TYR B 87 ? N TYR B 200 O PHE B 132 ? O PHE B 245 AA2 2 3 O GLU B 131 ? O GLU B 244 N PHE B 116 ? N PHE B 229 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 4 "O4'" A C 106 ? ? "C1'" A C 106 ? ? N1 A C 106 ? ? 112.83 108.50 4.33 0.70 N 2 6 "O4'" A C 106 ? ? "C1'" A C 106 ? ? N1 A C 106 ? ? 112.73 108.50 4.23 0.70 N 3 8 "O4'" A C 106 ? ? "C1'" A C 106 ? ? N1 A C 106 ? ? 113.29 108.50 4.79 0.70 N 4 9 "O4'" A U 104 ? ? "C1'" A U 104 ? ? N1 A U 104 ? ? 112.98 108.50 4.48 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU B 119 ? ? -139.90 -33.48 2 1 GLU B 121 ? ? -111.55 53.40 3 1 ARG B 130 ? ? -134.55 -51.55 4 1 PRO B 133 ? ? -68.94 -88.01 5 1 LEU B 134 ? ? -172.54 -36.12 6 1 GLN B 137 ? ? 31.28 57.98 7 1 MET B 151 ? ? 34.72 98.54 8 1 ASN B 158 ? ? -55.52 106.18 9 1 HIS B 179 ? ? -76.11 29.70 10 1 LYS B 181 ? ? -142.47 -156.69 11 1 ALA B 184 ? ? -156.84 34.18 12 1 GLU B 189 ? ? -147.30 41.87 13 1 ASN B 206 ? ? -159.82 -156.61 14 1 ASN B 223 ? ? -108.86 -63.04 15 1 SER B 224 ? ? -171.59 -39.50 16 1 VAL B 232 ? ? -141.66 52.57 17 1 PHE B 237 ? ? 54.44 86.83 18 1 GLU B 262 ? ? 63.89 91.89 19 1 THR B 269 ? ? -97.34 47.91 20 1 ASP B 274 ? ? 52.90 70.90 21 1 ARG B 281 ? ? 59.54 171.05 22 2 SER B 123 ? ? -69.79 21.44 23 2 ARG B 130 ? ? -139.09 -51.90 24 2 PRO B 133 ? ? -72.76 -88.61 25 2 LEU B 134 ? ? -172.85 -38.44 26 2 VAL B 136 ? ? -74.03 28.56 27 2 GLU B 140 ? ? -141.65 -16.52 28 2 MET B 151 ? ? 34.27 97.60 29 2 ASN B 158 ? ? -51.42 106.76 30 2 HIS B 179 ? ? -77.83 25.77 31 2 LYS B 181 ? ? -142.22 -157.75 32 2 ALA B 184 ? ? -158.74 37.21 33 2 GLU B 189 ? ? -150.89 36.18 34 2 SER B 193 ? ? -79.68 -167.53 35 2 ASN B 206 ? ? -155.90 -143.28 36 2 ASN B 223 ? ? -129.70 -67.76 37 2 SER B 224 ? ? -170.12 -37.43 38 2 PHE B 237 ? ? 56.70 94.49 39 2 GLU B 262 ? ? 66.33 88.75 40 2 THR B 269 ? ? -99.57 42.54 41 2 ARG B 280 ? ? -158.06 -25.06 42 3 ARG B 117 ? ? -72.39 20.50 43 3 THR B 125 ? ? -130.48 -43.26 44 3 ARG B 130 ? ? -138.25 -52.11 45 3 PRO B 131 ? ? -71.19 43.36 46 3 PRO B 133 ? ? -71.05 -88.61 47 3 LEU B 134 ? ? -171.94 -36.52 48 3 GLN B 137 ? ? 32.67 57.53 49 3 MET B 151 ? ? 33.20 96.57 50 3 ASN B 158 ? ? -58.83 106.16 51 3 HIS B 179 ? ? -75.97 29.39 52 3 LYS B 181 ? ? -141.99 -157.34 53 3 ALA B 184 ? ? -156.55 33.52 54 3 GLU B 189 ? ? -147.93 40.12 55 3 ASN B 206 ? ? -155.97 -118.01 56 3 ASN B 223 ? ? -132.84 -69.45 57 3 SER B 224 ? ? -169.48 -35.83 58 3 ASP B 236 ? ? 56.84 8.78 59 3 PHE B 237 ? ? 54.52 99.44 60 3 GLU B 262 ? ? 62.97 92.37 61 3 THR B 269 ? ? -95.25 38.36 62 3 ASN B 275 ? ? 37.20 71.54 63 4 GLU B 119 ? ? -154.09 -25.26 64 4 ARG B 130 ? ? -139.17 -51.43 65 4 PRO B 133 ? ? -70.68 -87.22 66 4 LEU B 134 ? ? -173.78 -36.15 67 4 GLN B 137 ? ? 30.71 58.79 68 4 MET B 151 ? ? 35.00 97.43 69 4 ASN B 158 ? ? -53.73 106.62 70 4 HIS B 179 ? ? -76.94 29.69 71 4 LYS B 181 ? ? -142.99 -157.10 72 4 ALA B 184 ? ? -157.55 37.09 73 4 GLU B 189 ? ? -149.76 40.01 74 4 ASN B 206 ? ? -158.44 -145.83 75 4 SER B 224 ? ? -170.53 -38.39 76 4 ASP B 236 ? ? -154.12 -70.07 77 4 PHE B 237 ? ? -166.53 110.46 78 4 ARG B 257 ? ? -140.90 -29.82 79 4 GLU B 262 ? ? 64.31 93.95 80 4 THR B 269 ? ? -94.71 43.26 81 4 ASN B 275 ? ? 38.61 54.31 82 5 THR B 125 ? ? -130.03 -42.57 83 5 ARG B 130 ? ? -141.71 -50.55 84 5 PRO B 131 ? ? -68.01 43.60 85 5 PRO B 133 ? ? -70.60 -88.06 86 5 LEU B 134 ? ? -172.80 -35.49 87 5 GLN B 137 ? ? 33.00 58.71 88 5 MET B 151 ? ? 34.05 96.35 89 5 ASN B 158 ? ? -55.67 106.46 90 5 LYS B 181 ? ? -141.02 -154.47 91 5 ALA B 184 ? ? -156.63 34.64 92 5 GLU B 189 ? ? -156.66 42.34 93 5 ASN B 206 ? ? -156.49 -140.69 94 5 ASN B 223 ? ? -106.23 -68.15 95 5 SER B 224 ? ? -172.51 -36.70 96 5 PHE B 237 ? ? 56.87 99.47 97 5 GLU B 262 ? ? 66.95 99.39 98 5 ARG B 264 ? ? 57.06 19.95 99 5 THR B 269 ? ? -101.54 47.06 100 6 GLN B 118 ? ? -153.72 -13.93 101 6 GLU B 121 ? ? -107.30 41.55 102 6 THR B 125 ? ? -131.55 -46.46 103 6 ARG B 130 ? ? -140.23 -53.04 104 6 PRO B 133 ? ? -70.37 -87.23 105 6 LEU B 134 ? ? -173.92 -36.31 106 6 GLN B 137 ? ? 31.13 58.74 107 6 MET B 151 ? ? 34.07 95.38 108 6 ASN B 158 ? ? -54.54 105.84 109 6 HIS B 179 ? ? -76.12 28.14 110 6 LYS B 181 ? ? -141.77 -156.65 111 6 ALA B 184 ? ? -157.30 36.54 112 6 GLU B 189 ? ? -149.51 35.10 113 6 ASN B 206 ? ? -155.87 -142.21 114 6 ASN B 223 ? ? -131.82 -68.71 115 6 SER B 224 ? ? -169.76 -36.15 116 6 PHE B 237 ? ? 58.03 102.92 117 6 GLU B 262 ? ? 63.80 95.83 118 6 THR B 269 ? ? -99.40 39.20 119 6 PRO B 277 ? ? -53.26 179.55 120 6 PRO B 278 ? ? -46.85 153.42 121 6 ARG B 281 ? ? -144.08 -6.40 122 7 ARG B 117 ? ? 59.25 5.66 123 7 GLU B 119 ? ? -164.37 -20.11 124 7 LEU B 122 ? ? -70.35 31.75 125 7 THR B 125 ? ? -132.20 -47.96 126 7 ARG B 130 ? ? -142.09 -51.08 127 7 PRO B 131 ? ? -69.52 42.93 128 7 PRO B 133 ? ? -71.66 -89.50 129 7 LEU B 134 ? ? -172.10 -36.18 130 7 GLN B 137 ? ? 33.60 57.93 131 7 MET B 151 ? ? 32.20 94.46 132 7 LYS B 181 ? ? -140.11 -154.48 133 7 ALA B 184 ? ? -157.01 33.63 134 7 GLU B 189 ? ? -156.92 41.74 135 7 SER B 193 ? ? -79.83 -156.51 136 7 ASN B 206 ? ? -156.23 -129.14 137 7 ASN B 223 ? ? -125.54 -66.39 138 7 SER B 224 ? ? -169.93 -37.50 139 7 ASP B 236 ? ? -155.43 -62.63 140 7 PHE B 237 ? ? -164.89 111.72 141 7 GLU B 262 ? ? 66.07 96.82 142 7 THR B 269 ? ? -96.49 44.50 143 8 THR B 125 ? ? -132.12 -43.82 144 8 ARG B 130 ? ? -142.04 -50.38 145 8 PRO B 131 ? ? -68.56 43.28 146 8 PRO B 133 ? ? -70.01 -87.81 147 8 LEU B 134 ? ? -172.92 -36.08 148 8 GLN B 137 ? ? 32.65 57.70 149 8 MET B 151 ? ? 33.84 96.36 150 8 ASN B 158 ? ? -55.67 107.54 151 8 HIS B 179 ? ? -76.79 26.23 152 8 LYS B 181 ? ? -141.13 -157.68 153 8 ALA B 184 ? ? -157.08 34.42 154 8 GLU B 189 ? ? -158.16 44.12 155 8 ASN B 206 ? ? -159.10 -144.04 156 8 SER B 224 ? ? -179.21 -26.48 157 8 LEU B 225 ? ? -69.94 -175.46 158 8 ASP B 236 ? ? -154.29 -49.30 159 8 GLU B 262 ? ? 64.94 92.71 160 8 THR B 269 ? ? -93.81 42.16 161 8 ASP B 274 ? ? 59.77 17.75 162 8 ASN B 275 ? ? 37.55 64.22 163 9 GLU B 121 ? ? -105.99 50.26 164 9 THR B 125 ? ? -130.20 -44.94 165 9 ARG B 130 ? ? -141.42 -49.53 166 9 PRO B 131 ? ? -68.73 42.63 167 9 PRO B 133 ? ? -70.42 -88.87 168 9 LEU B 134 ? ? -171.97 -36.71 169 9 GLN B 137 ? ? 32.05 59.01 170 9 MET B 151 ? ? 32.84 96.20 171 9 ASN B 158 ? ? -55.78 106.44 172 9 HIS B 179 ? ? -76.81 28.30 173 9 LYS B 181 ? ? -141.85 -156.44 174 9 ALA B 184 ? ? -156.65 33.82 175 9 GLU B 189 ? ? -149.65 38.73 176 9 LEU B 195 ? ? 54.86 74.07 177 9 ASN B 206 ? ? -159.04 -136.12 178 9 ASN B 223 ? ? -128.57 -70.26 179 9 SER B 224 ? ? -169.19 -35.85 180 9 ASP B 236 ? ? -164.66 -61.51 181 9 PHE B 237 ? ? -164.64 118.70 182 9 GLU B 262 ? ? 65.90 100.95 183 9 ARG B 264 ? ? 59.23 19.78 184 9 THR B 269 ? ? -96.78 44.80 185 10 GLN B 118 ? ? -150.29 19.73 186 10 THR B 125 ? ? -132.08 -47.94 187 10 ARG B 130 ? ? -140.59 -53.62 188 10 PRO B 133 ? ? -70.03 -86.97 189 10 LEU B 134 ? ? -173.74 -37.41 190 10 GLN B 137 ? ? 30.79 58.55 191 10 GLU B 140 ? ? -140.41 -17.12 192 10 MET B 151 ? ? 34.64 97.84 193 10 ASN B 158 ? ? -55.94 106.41 194 10 HIS B 179 ? ? -76.79 30.26 195 10 LYS B 181 ? ? -142.11 -156.99 196 10 ALA B 184 ? ? -157.26 36.87 197 10 GLU B 189 ? ? -149.85 38.54 198 10 ASN B 206 ? ? -157.58 -139.71 199 10 ASN B 223 ? ? -102.70 -69.31 200 10 SER B 224 ? ? -171.89 -35.72 201 10 VAL B 232 ? ? -148.76 39.51 202 10 ASN B 233 ? ? -71.63 27.86 203 10 PHE B 237 ? ? 56.30 106.54 204 10 GLU B 262 ? ? 67.05 100.42 205 10 THR B 269 ? ? -104.40 40.94 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 C A 106 ? ? 0.135 'SIDE CHAIN' 2 2 C A 106 ? ? 0.063 'SIDE CHAIN' 3 3 C A 106 ? ? 0.083 'SIDE CHAIN' 4 4 C A 106 ? ? 0.105 'SIDE CHAIN' 5 4 G A 111 ? ? 0.060 'SIDE CHAIN' 6 5 C A 106 ? ? 0.103 'SIDE CHAIN' 7 6 C A 106 ? ? 0.105 'SIDE CHAIN' 8 7 C A 106 ? ? 0.080 'SIDE CHAIN' 9 7 G A 111 ? ? 0.062 'SIDE CHAIN' 10 8 C A 106 ? ? 0.131 'SIDE CHAIN' 11 9 U A 104 ? ? 0.063 'SIDE CHAIN' 12 9 C A 106 ? ? 0.133 'SIDE CHAIN' 13 9 G A 111 ? ? 0.091 'SIDE CHAIN' 14 10 C A 106 ? ? 0.111 'SIDE CHAIN' 15 10 G A 111 ? ? 0.065 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 7QDE _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 7QDE _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.9 mM [U-15N] Npl3 RRM12, 90% H2O/10% D2O' '90% H2O/10% D2O' '15N Npl3 RRM12' solution ? 2 '0.9 mM [U-100% 13C; U-100% 15N] Npl3 RRM12, 90% H2O/10% D2O' '90% H2O/10% D2O' '15N 13C Npl3 RRM12' solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'Npl3 RRM12' 0.9 ? mM '[U-15N]' 2 'Npl3 RRM12' 0.9 ? mM '[U-100% 13C; U-100% 15N]' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 313 _pdbx_nmr_exptl_sample_conditions.pressure_units Pa _pdbx_nmr_exptl_sample_conditions.pressure 0 _pdbx_nmr_exptl_sample_conditions.pH 6.9 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label standard _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '3D 1H-15N NOESY' 1 isotropic 2 1 2 '3D 1H-13C NOESY aliphatic' 1 isotropic 3 1 2 '3D 1H-13C NOESY aromatic' 1 isotropic 4 1 1 '2D NOESY' 2 isotropic 5 1 2 '2D NOESY F1F2f' 3 isotropic 6 1 2 '2D NOESY F2f' 3 isotropic 7 1 2 '3D HNCACB' 2 isotropic # _pdbx_nmr_refine.entry_id 7QDE _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement Amber ? 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 2 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 3 'chemical shift assignment' Sparky ? Goddard 4 'peak picking' CYANA ? 'Guntert, Mumenthaler and Wuthrich' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TRP N N N N 428 TRP CA C N S 429 TRP C C N N 430 TRP O O N N 431 TRP CB C N N 432 TRP CG C Y N 433 TRP CD1 C Y N 434 TRP CD2 C Y N 435 TRP NE1 N Y N 436 TRP CE2 C Y N 437 TRP CE3 C Y N 438 TRP CZ2 C Y N 439 TRP CZ3 C Y N 440 TRP CH2 C Y N 441 TRP OXT O N N 442 TRP H H N N 443 TRP H2 H N N 444 TRP HA H N N 445 TRP HB2 H N N 446 TRP HB3 H N N 447 TRP HD1 H N N 448 TRP HE1 H N N 449 TRP HE3 H N N 450 TRP HZ2 H N N 451 TRP HZ3 H N N 452 TRP HH2 H N N 453 TRP HXT H N N 454 TYR N N N N 455 TYR CA C N S 456 TYR C C N N 457 TYR O O N N 458 TYR CB C N N 459 TYR CG C Y N 460 TYR CD1 C Y N 461 TYR CD2 C Y N 462 TYR CE1 C Y N 463 TYR CE2 C Y N 464 TYR CZ C Y N 465 TYR OH O N N 466 TYR OXT O N N 467 TYR H H N N 468 TYR H2 H N N 469 TYR HA H N N 470 TYR HB2 H N N 471 TYR HB3 H N N 472 TYR HD1 H N N 473 TYR HD2 H N N 474 TYR HE1 H N N 475 TYR HE2 H N N 476 TYR HH H N N 477 TYR HXT H N N 478 U OP3 O N N 479 U P P N N 480 U OP1 O N N 481 U OP2 O N N 482 U "O5'" O N N 483 U "C5'" C N N 484 U "C4'" C N R 485 U "O4'" O N N 486 U "C3'" C N S 487 U "O3'" O N N 488 U "C2'" C N R 489 U "O2'" O N N 490 U "C1'" C N R 491 U N1 N N N 492 U C2 C N N 493 U O2 O N N 494 U N3 N N N 495 U C4 C N N 496 U O4 O N N 497 U C5 C N N 498 U C6 C N N 499 U HOP3 H N N 500 U HOP2 H N N 501 U "H5'" H N N 502 U "H5''" H N N 503 U "H4'" H N N 504 U "H3'" H N N 505 U "HO3'" H N N 506 U "H2'" H N N 507 U "HO2'" H N N 508 U "H1'" H N N 509 U H3 H N N 510 U H5 H N N 511 U H6 H N N 512 VAL N N N N 513 VAL CA C N S 514 VAL C C N N 515 VAL O O N N 516 VAL CB C N N 517 VAL CG1 C N N 518 VAL CG2 C N N 519 VAL OXT O N N 520 VAL H H N N 521 VAL H2 H N N 522 VAL HA H N N 523 VAL HB H N N 524 VAL HG11 H N N 525 VAL HG12 H N N 526 VAL HG13 H N N 527 VAL HG21 H N N 528 VAL HG22 H N N 529 VAL HG23 H N N 530 VAL HXT H N N 531 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TRP N CA sing N N 419 TRP N H sing N N 420 TRP N H2 sing N N 421 TRP CA C sing N N 422 TRP CA CB sing N N 423 TRP CA HA sing N N 424 TRP C O doub N N 425 TRP C OXT sing N N 426 TRP CB CG sing N N 427 TRP CB HB2 sing N N 428 TRP CB HB3 sing N N 429 TRP CG CD1 doub Y N 430 TRP CG CD2 sing Y N 431 TRP CD1 NE1 sing Y N 432 TRP CD1 HD1 sing N N 433 TRP CD2 CE2 doub Y N 434 TRP CD2 CE3 sing Y N 435 TRP NE1 CE2 sing Y N 436 TRP NE1 HE1 sing N N 437 TRP CE2 CZ2 sing Y N 438 TRP CE3 CZ3 doub Y N 439 TRP CE3 HE3 sing N N 440 TRP CZ2 CH2 doub Y N 441 TRP CZ2 HZ2 sing N N 442 TRP CZ3 CH2 sing Y N 443 TRP CZ3 HZ3 sing N N 444 TRP CH2 HH2 sing N N 445 TRP OXT HXT sing N N 446 TYR N CA sing N N 447 TYR N H sing N N 448 TYR N H2 sing N N 449 TYR CA C sing N N 450 TYR CA CB sing N N 451 TYR CA HA sing N N 452 TYR C O doub N N 453 TYR C OXT sing N N 454 TYR CB CG sing N N 455 TYR CB HB2 sing N N 456 TYR CB HB3 sing N N 457 TYR CG CD1 doub Y N 458 TYR CG CD2 sing Y N 459 TYR CD1 CE1 sing Y N 460 TYR CD1 HD1 sing N N 461 TYR CD2 CE2 doub Y N 462 TYR CD2 HD2 sing N N 463 TYR CE1 CZ doub Y N 464 TYR CE1 HE1 sing N N 465 TYR CE2 CZ sing Y N 466 TYR CE2 HE2 sing N N 467 TYR CZ OH sing N N 468 TYR OH HH sing N N 469 TYR OXT HXT sing N N 470 U OP3 P sing N N 471 U OP3 HOP3 sing N N 472 U P OP1 doub N N 473 U P OP2 sing N N 474 U P "O5'" sing N N 475 U OP2 HOP2 sing N N 476 U "O5'" "C5'" sing N N 477 U "C5'" "C4'" sing N N 478 U "C5'" "H5'" sing N N 479 U "C5'" "H5''" sing N N 480 U "C4'" "O4'" sing N N 481 U "C4'" "C3'" sing N N 482 U "C4'" "H4'" sing N N 483 U "O4'" "C1'" sing N N 484 U "C3'" "O3'" sing N N 485 U "C3'" "C2'" sing N N 486 U "C3'" "H3'" sing N N 487 U "O3'" "HO3'" sing N N 488 U "C2'" "O2'" sing N N 489 U "C2'" "C1'" sing N N 490 U "C2'" "H2'" sing N N 491 U "O2'" "HO2'" sing N N 492 U "C1'" N1 sing N N 493 U "C1'" "H1'" sing N N 494 U N1 C2 sing N N 495 U N1 C6 sing N N 496 U C2 O2 doub N N 497 U C2 N3 sing N N 498 U N3 C4 sing N N 499 U N3 H3 sing N N 500 U C4 O4 doub N N 501 U C4 C5 sing N N 502 U C5 C6 doub N N 503 U C5 H5 sing N N 504 U C6 H6 sing N N 505 VAL N CA sing N N 506 VAL N H sing N N 507 VAL N H2 sing N N 508 VAL CA C sing N N 509 VAL CA CB sing N N 510 VAL CA HA sing N N 511 VAL C O doub N N 512 VAL C OXT sing N N 513 VAL CB CG1 sing N N 514 VAL CB CG2 sing N N 515 VAL CB HB sing N N 516 VAL CG1 HG11 sing N N 517 VAL CG1 HG12 sing N N 518 VAL CG1 HG13 sing N N 519 VAL CG2 HG21 sing N N 520 VAL CG2 HG22 sing N N 521 VAL CG2 HG23 sing N N 522 VAL OXT HXT sing N N 523 # _pdbx_audit_support.funding_organization 'Swiss National Science Foundation' _pdbx_audit_support.country Switzerland _pdbx_audit_support.grant_number 310030B-189379 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 900 ? 2 'AVANCE III' ? Bruker 700 ? 3 'AVANCE III' ? Bruker 600 ? # _atom_sites.entry_id 7QDE _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O P S # loop_